LICENSE
MANIFEST.in
README.md
setup.py
mtsv/__init__.py
mtsv/main.py
mtsv/parameters.py
mtsv/parsing.py
mtsv/utils.py
mtsv.egg-info/PKG-INFO
mtsv.egg-info/SOURCES.txt
mtsv.egg-info/dependency_links.txt
mtsv.egg-info/entry_points.txt
mtsv.egg-info/top_level.txt
mtsv/argutils/__init__.py
mtsv/argutils/export.py
mtsv/argutils/read.py
mtsv/commands/__init__.py
mtsv/commands/cmd_specs/analyze.yml
mtsv/commands/cmd_specs/binning.yml
mtsv/commands/cmd_specs/concoct.yml
mtsv/commands/cmd_specs/custom_db.yml
mtsv/commands/cmd_specs/database.yml
mtsv/commands/cmd_specs/extract.yml
mtsv/commands/cmd_specs/pipeline.yml
mtsv/commands/cmd_specs/readprep.yml
mtsv/commands/cmd_specs/summary.yml
mtsv/commands/cmd_specs/wgfast.yml
mtsv/commands/snakefiles/analyze_bypass_snek
mtsv/commands/snakefiles/analyze_setup_snek
mtsv/commands/snakefiles/analyze_snek
mtsv/commands/snakefiles/binning_snek
mtsv/commands/snakefiles/concoct_snek
mtsv/commands/snakefiles/extract_snek
mtsv/commands/snakefiles/pipeline_snek
mtsv/commands/snakefiles/readprep_snek
mtsv/commands/snakefiles/summary_snek
mtsv/commands/snakefiles/wgfast_snek
mtsv/data/ete_databases.json
mtsv/mtsv_plugin/__init__.py
mtsv/mtsv_plugin/main.py
mtsv/mtsv_prep/MTSv_prune.py
mtsv/mtsv_prep/__init__.py
mtsv/mtsv_prep/main.py
mtsv/scripts/MTSv_analyze.py
mtsv/scripts/MTSv_candidate_taxa.py
mtsv/scripts/MTSv_custom_build.py
mtsv/scripts/MTSv_extract.py
mtsv/scripts/MTSv_prune.py
mtsv/scripts/MTSv_random_kmers.py
mtsv/scripts/MTSv_signature.py
mtsv/scripts/MTSv_summary.py
mtsv/scripts/MTSv_unaligned_queries.py
mtsv/scripts/__init__.py
mtsv/test/__init__.py
mtsv/test/test_MTSv_signature.py