Metadata-Version: 1.2
Name: misopy
Version: 0.5.4
Summary: Mixture of Isoforms model (MISO) for isoform quantitation using RNA-Seq
Home-page: http://genes.mit.edu/burgelab/miso/
Author: Yarden Katz,Gabor Csardi
Author-email: yarden@mit.edu,gcsardi@stat.harvard.edu
Maintainer: Yarden Katz
Maintainer-email: yarden@mit.edu
License: UNKNOWN
Description: MISO (Mixture of Isoforms) is a probabilistic framework that quantitates the expression level of alternatively spliced genes from RNA-Seq data, and identifies differentially regulated isoforms or exons across samples. By modeling the generative process by which reads are produced from isoforms in RNA-Seq, the MISO model uses Bayesian inference to compute the probability that a read originated from a particular isoform.
        
        MISO uses the inferred assignment of reads to isoforms to quantitate the abundances of the underlying set of alternative mRNA isoforms. Confidence intervals over estimates can be obtained, which quantify the reliability of the estimates. 
        
        Please see http://genes.mit.edu/burgelab/miso/docs/ for MISO manual and documentation.
        
Keywords: bioinformatics,sequence analysis,alternative splicing,RNA-Seq,probabilistic models,bayesian
Platform: ALL
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Science/Research
Classifier: Programming Language :: C
Classifier: Programming Language :: Python
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
