# This file created by conda-build 3.10.3
# meta.yaml template originally from:
# /opt/recipe, last modified Mon Jun 25 23:09:17 2018
# ------------------------------------------------

package:
    name: mikado
    version: 1.2.2
source:
    sha256: c74191949345b93547db6ecb08d5ec7e0151fc125912181728e4ea451e02f3b8
    url: https://github.com/lucventurini/mikado/archive/1.2.2.tar.gz
build:
    entry_points:
        - daijin = Mikado.daijin:main
        - mikado = Mikado:main
    number: '1'
    script: python -m pip install --no-deps --ignore-installed .
    string: py35h24bf2e0_1
requirements:
    host:
        - aioeasywebdav 2.2.0 py35_0
        - aiohttp 3.1.3 py35_0
        - appdirs 1.4.3 py_1
        - asn1crypto 0.24.0 py35_0
        - async-timeout 2.0.1 py35_0
        - attrs 18.1.0 py_1
        - bcrypt 3.1.4 py35ha35c455_0
        - biopython 1.68 py35_0
        - blas 1.1 openblas
        - boto3 1.7.45 py_0
        - botocore 1.10.45 py_0
        - ca-certificates 2018.4.16 0
        - cachetools 2.0.1 py_0
        - cairo 1.14.6 4
        - certifi 2018.4.16 py35_0
        - cffi 1.11.5 py35_0
        - chardet 3.0.4 py35_0
        - configargparse 0.12.0 py35_0
        - cryptography 2.2.1 py35_0
        - cython 0.28.3 py35hfc679d8_0
        - datrie 0.7.1 py35_0
        - decorator 4.3.0 py_0
        - docutils 0.14 py35_0
        - drmaa 0.7.8 py_0
        - dropbox 7.3.1 py35_0
        - expat 2.2.5 0
        - filechunkio 1.6 py35_0
        - fontconfig 2.12.1 4
        - freetype 2.7 1
        - frozendict 1.2 py35_0
        - ftputil 3.2 py35_0
        - gettext 0.19.8.1 0
        - glib 2.51.4 0
        - google-auth 1.2.1 py_0
        - google-auth-httplib2 0.0.2 py35_0
        - google-cloud-core 0.24.1 py35_0
        - google-cloud-storage 1.1.1 py35_0
        - google-resumable-media 0.0.2 py35_0
        - googleapis-common-protos 1.5.3 py35_0
        - graphite2 1.3.11 hfc679d8_0
        - graphviz 2.38.0 4
        - harfbuzz 1.4.3 0
        - httplib2 0.11.1 py35_0
        - icu 58.2 hfc679d8_0
        - idna 2.7 py35_0
        - idna_ssl 1.0.0 0
        - intervaltree 2.1.0 py35_0
        - jinja2 2.10 py35_0
        - jmespath 0.9.3 py35_0
        - jpeg 9b 2
        - jsonschema 2.6.0 py35_1
        - libffi 3.2.1 3
        - libgcc-ng 7.2.0 hdf63c60_3
        - libgfortran 3.0.0 1
        - libiconv 1.15 h470a237_1
        - libmagic 5.32 0
        - libpng 1.6.34 0
        - libprotobuf 3.5.2 0
        - libstdcxx-ng 7.2.0 hdf63c60_3
        - libtiff 4.0.9 he6b73bb_0
        - libtool 2.4.6 0
        - libxml2 2.9.8 0
        - markupsafe 1.0 py35_0
        - mmtf-python 1.0.2 py35_0
        - msgpack-python 0.5.6 py35h2d50403_2
        - multidict 4.3.1 py35h470a237_0
        - ncurses 5.9 10
        - networkx 2.1 py35_0
        - nose 1.3.7 py35_2
        - numpy 1.9.3 py35_blas_openblas_203
        - olefile 0.45.1 py35_0
        - openblas 0.2.20 8
        - openssl 1.0.2o 0
        - pandas 0.23.1 py35_0
        - pango 1.40.4 0
        - paramiko 2.4.1 py35_0
        - pcre 8.41 1
        - pillow 4.2.1 py35_0
        - pip 9.0.3 py35_0
        - pixman 0.34.0 2
        - prettytable 0.7.2 py35_1
        - protobuf 3.5.2 py35_0
        - psutil 5.4.6 py35_0
        - pyasn1 0.4.3 py_0
        - pyasn1-modules 0.0.5 py35_0
        - pycparser 2.18 py35_0
        - pyfaidx 0.5.4.1 py_0
        - pygraphviz 1.3.1 py35_0
        - pynacl 1.1.2 py35_0
        - pysftp 0.2.9 py35_0
        - python 3.5.5 1
        - python-dateutil 2.7.3 py_0
        - python-irodsclient 0.7.0 py_0
        - python-magic 0.4.15 py35_0
        - pytz 2018.4 py_0
        - pyyaml 3.12 py35_1
        - ratelimiter 1.2.0 py35_0
        - readline 7.0 0
        - reportlab 3.4.0 py35_0
        - requests 2.13.0 py35_0
        - rsa 3.1.4 py35_0
        - s3transfer 0.1.13 py35_0
        - scikit-learn 0.19.1 py35_blas_openblas_201
        - scipy 1.1.0 py35_blas_openblas_200
        - setuptools 39.2.0 py35_0
        - simplejson 3.8.1 py35_0
        - six 1.11.0 py35_1
        - snakemake 5.1.5 py35_0
        - sortedcontainers 2.0.4 py35_0
        - sqlalchemy 1.2.8 py35_0
        - sqlalchemy-utils 0.31.6 py35_0
        - sqlite 3.20.1 2
        - tabulate 0.8.2 py_0
        - tk 8.6.7 0
        - typing 3.5.2.2 py35_0
        - ujson 1.35 py35_0
        - urllib3 1.12 py35_0
        - wheel 0.31.0 py35_0
        - wrapt 1.10.11 py35_0
        - xmlrunner 1.7.7 py_0
        - xz 5.2.3 0
        - yaml 0.1.7 0
        - yarl 1.2.6 py35h470a237_0
        - zlib 1.2.11 h470a237_3
    run:
        - biopython >=1.66
        - cython >=0.28.2
        - docutils !=0.13.1
        - drmaa
        - frozendict
        - intervaltree
        - jsonschema
        - libmagic
        - networkx >=1.10
        - nose
        - numpy
        - portcullis
        - pyfaidx
        - python >=3.5,<3.6.0a0
        - python-magic
        - pyyaml
        - scikit-learn >=0.17.0
        - scipy >=0.15.0
        - simplejson
        - snakemake
        - sqlalchemy >=1
        - sqlalchemy-utils
        - tabulate
        - typing
        - ujson
        - wheel >=0.28.0
test:
    commands:
        - mikado --help
        - daijin --help
        - python -c "import Mikado; Mikado.test()"
    imports:
        - Mikado
        - Mikado.configuration
        - Mikado.daijin
        - Mikado.loci
        - Mikado.parsers
        - Mikado.picking
        - Mikado.preparation
        - Mikado.scales
        - Mikado.serializers
        - Mikado.serializers.blast_serializer
        - Mikado.subprograms
        - Mikado.subprograms.util
        - Mikado.tests
        - Mikado.transcripts
        - Mikado.transcripts.transcript_methods
        - Mikado.utilities
        - nose
about:
    home: https://github.com/lucventurini/mikado
    license: GNU Lesser General Public License v3 or later (LGPLv3+)
    license_family: LGPL
    summary: A Python3 annotation program to select the best gene model in each locus
extra:
    copy_test_source_files: true
    final: true
