##fileformat=VCFv3.3
##fileDate=20090805
##phasing=partial
##test meta
##INFO=NS,1,Integer,"Number of Samples With Data"
##INFO=DP,1,Integer,"Total Depth"
##INFO=AN,1,Integer,"Total number of alleles in called genotypes"
##INFO=AC,-1,Integer,"Allele count in genotypes, for each ALT allele, in the same order as listed"
##INFO=AF,-1,Float,"Allele Frequency"
##INFO=AA,1,String,"Ancestral Allele"
##INFO=DB,0,Flag,"dbSNP membership, build 129"
##INFO=H2,0,Flag,"HapMap2 membership"
##FILTER=q10,"Quality below 10"
##FILTER=s50,"Less than 50% of samples have data"
##FORMAT=GT,1,String,"Genotype"
##FORMAT=GQ,1,Integer,"Genotype Quality"
##FORMAT=DP,1,Integer,"Read Depth"
##FORMAT=HQ,2,Integer,"Haplotype Quality"
##FORMAT=DS,1,Float,"Alternative Allele Dosage"
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NA00001	NA00002	NA00003
19	111	.	A	C	9.6	.	.	GT:HQ	0|0:10,10	0|0:10,10	0\1:3,3
19	112	.	A	G	10	.	.	GT:HQ	0|0:10,10	0|0:10,10	0\1:3,3
20	14370	rs6054257	G	A	29	0	NS=3;DP=14;AF=0.5;DB;H2	GT:GQ:DP:HQ	0|0:48:1:51,51	1|0:48:8:51,51	1/1:43:5:-1,-1
20	17330	.	T	A	3	q10	NS=3;DP=11;AF=0.017	GT:GQ:DP:HQ	0|0:49:3:58,50	0|1:3:5:65,3	0/0:41:3:-1,-1
20	1110696	rs6040355	A	G,T	67	0	NS=2;DP=10;AF=0.333,0.667;AA=T;DB	GT:GQ:DP:HQ	1|2:21:6:23,27	2|1:2:0:18,2	2/2:35:4:-1,-1
20	1230237	.	T	.	47	0	NS=3;DP=13;AA=T	GT:GQ:DP:HQ	0|0:54:-1:56,60	0|0:48:4:51,51	0/0:61:2:-1,-1
20	1234567	microsat1	G	D4,IGA	50	0	NS=3;DP=9;AA=G;AN=6;AC=3,1	GT:GQ:DP	0/1:-1:4	0/2:17:2	1/1:40:3
20	1235237	.	T	.	-1	.	.	GT	0\0	0|0	./.
X	10	rsTest	A	T	10	.	.	GT:DS	0:0.1	0/1:0.5	0|1:0.5
X	11	rsTest2	T	A,G	10	q10;s50	.	GT:DP:GQ	0:3:10	.:5:20	0:3:10
