Database and Motifs | High-scoring Motif Occurences | Debugging Information | Results in TSV Format | Results in GFF3 Format | Best Site per Sequence

FIMO - Motif search tool

FIMO version 5.5.6, (Release date: Wed Jun 19 13:59:04 2024 -0700)

For further information on how to interpret these results please access https://meme-suite.org/meme/doc/fimo-output-format.html.
To get a copy of the FIMO software please access https://meme-suite.org

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]

DATABASE AND MOTIFS

DATABASE nrmix.nseqs.100.100bp.seed.1.fa
Database contains 2100 sequences, 210000 residues

MOTIFS xstreme_example_output_files/meme_out/meme.xml (DNA)

MOTIF | WIDTH | BEST POSSIBLE MATCH
--- | --- | ---
TTTTYTTTTYTTTYW | 15 | TTTTTTTTTTTTTCT
VATGACTCAG | 10 | GATGACTCAG
SCCCCGCCCCC | 11 | GCCCCGCCCCC
CCASYAGRKGGCRSY | 15 | CCACCAGGGGGCGCT
CTTATCT | 7 | CTTATCT
GACTACAWYTCCCAG | 15 | GACTACATCTCCCAG
TGCACTCCAGCCTGG | 15 | TGCACTCCAGCCTGG
AAASAGGAAGT | 11 | AAACAGGAAGT
GCGCMTGCGCG | 11 | GCGCCTGCGCG
RGCTCACTGCAGCCT | 15 | AGCTCACTGCAGCCT

Random model letter frequencies (xstreme_example_output_files/background):
A 0.222 C 0.278 G 0.278 T 0.222

SECTION I: HIGH-SCORING MOTIF OCCURENCES

- There were 276 motif occurences with a p-value less than 0.0001. The full set of motif occurences can be seen in the TSV (tab-delimited values) output file fimo.tsv, the GFF3 file fimo.gff which may be suitable for uploading to the UCSC Genome Table Browser (assuming the FASTA input sequences included genomic coordinates in UCSC or Galaxy format), or the XML file fimo.xml.
- The p-value of a motif occurrence is defined as the probability of a random sequence of the same length as the motif matching that position of the sequence with as good or better a score.
- The score for the match of a position in a sequence to a motif is computed by summing the appropriate entries from each column of the position-dependent scoring matrix that represents the motif.
- The q-value of a motif occurrence is defined as the false discovery rate if the occurrence is accepted as significant.
- The table is sorted by increasing p-value.

Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence
--- | --- | --- | --- | --- | --- | --- | --- | ---
CCASYAGRKGGCRSY | MEME-4 | 14 | - | 106873495 | 106873509 | 4.2e-09 | 0.000757 | CCACCAGGGGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 161197123 | 161197137 | 4.2e-09 | 0.000757 | CCACCAGGGGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 14 | - | 106873458 | 106873472 | 6.54e-09 | 0.000785 | CCACTAGGGGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 6 | - | 33995374 | 33995388 | 1.24e-08 | 0.00112 | CCACCAGGGGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 11 | + | 76518427 | 76518441 | 2.14e-08 | 0.00154 | CCACCAGAGGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 3 | - | 195641867 | 195641881 | 3.71e-08 | 0.00217 | CCACCAGGGGGCACC
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 247535997 | 247536011 | 4.44e-08 | 0.00217 | CCACCAGAGGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 12 | - | 104026354 | 104026368 | 4.82e-08 | 0.00217 | CCAGTAGAGGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 11 | - | 123349089 | 123349103 | 1.03e-07 | 0.00377 | CCACTAGATGGCACT
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 224701388 | 224701402 | 1.05e-07 | 0.00377 | CCAGCAGGGGGCACC
CCASYAGRKGGCRSY | MEME-4 | 9 | + | 119499308 | 119499322 | 1.19e-07 | 0.00377 | CCAGCAGAGGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 202243731 | 202243745 | 1.34e-07 | 0.00377 | CCAGCAGAGGGCACT
CCASYAGRKGGCRSY | MEME-4 | 14 | + | 98604912 | 98604926 | 1.41e-07 | 0.00377 | CCAGTAGGGGGCAGT
CCASYAGRKGGCRSY | MEME-4 | 7 | + | 116570459 | 116570473 | 1.47e-07 | 0.00377 | CCAGCAGGTGGCACT
CCASYAGRKGGCRSY | MEME-4 | 1 | - | 27423861 | 27423875 | 1.74e-07 | 0.00388 | CCACCAGAGGGCAGT
CCASYAGRKGGCRSY | MEME-4 | 2 | - | 27906361 | 27906375 | 1.74e-07 | 0.00388 | CCACCAGAGGGCAGT
CCASYAGRKGGCRSY | MEME-4 | 11 | + | 111435850 | 111435864 | 1.89e-07 | 0.00388 | CCACCAGGTGGCAGT
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 46502696 | 46502710 | 1.94e-07 | 0.00388 | CCACCAGAGGGCGCA
CCASYAGRKGGCRSY | MEME-4 | 10 | + | 81134303 | 81134317 | 2.54e-07 | 0.00477 | CCACCAGAGGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 7 | - | 148224713 | 148224727 | 2.65e-07 | 0.00477 | CCAGCAGATGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 19 | + | 2051148 | 2051162 | 3.02e-07 | 0.00494 | CCAGAAGAGGGCGCT
CCASYAGRKGGCRSY | MEME-4 | X | + | 48774475 | 48774489 | 3.02e-07 | 0.00494 | CCGCCAGGGGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 19 | + | 14311003 | 14311017 | 3.21e-07 | 0.00502 | CCACTAGGGGGCGTT
CCASYAGRKGGCRSY | MEME-4 | 12 | + | 6532678 | 6532692 | 3.65e-07 | 0.00547 | CCACAAGAGGGCACC
CCASYAGRKGGCRSY | MEME-4 | 12 | - | 121668054 | 121668068 | 4.06e-07 | 0.00563 | CCACTAGGGGGAGGC
CCASYAGRKGGCRSY | MEME-4 | 1 | - | 203185304 | 203185318 | 4.06e-07 | 0.00563 | CCACTAGATGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 17 | + | 44270701 | 44270715 | 4.55e-07 | 0.00569 | CCGCCAGGGGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 6 | - | 30845463 | 30845477 | 4.62e-07 | 0.00569 | CCACTTGGGGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 20 | - | 35402586 | 35402600 | 4.62e-07 | 0.00569 | CCACTTGGGGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 16 | + | 629057 | 629071 | 4.8e-07 | 0.00569 | CCACAAGGGGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 8 | + | 128746154 | 128746168 | 4.9e-07 | 0.00569 | CCAGTAGAGGGCACA
CCASYAGRKGGCRSY | MEME-4 | 10 | + | 60059250 | 60059264 | 5.22e-07 | 0.00587 | CCACCAGGGGGAGGC
CCASYAGRKGGCRSY | MEME-4 | 2 | - | 233305235 | 233305249 | 5.59e-07 | 0.00603 | CCAGCAGGTGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 1 | - | 17955900 | 17955914 | 5.71e-07 | 0.00603 | CCAGGAGAGGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 5 | - | 9544554 | 9544568 | 5.97e-07 | 0.00603 | CCGGCAGGGGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 6 | - | 24766908 | 24766922 | 6.1e-07 | 0.00603 | CCACTAGGTGGCAAT
CCASYAGRKGGCRSY | MEME-4 | 2 | + | 113357578 | 113357592 | 6.19e-07 | 0.00603 | CCAGGAGGTGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 5 | - | 82726197 | 82726211 | 6.44e-07 | 0.00611 | CCACTAGGTGGCGTT
CCASYAGRKGGCRSY | MEME-4 | 3 | - | 38697191 | 38697205 | 6.85e-07 | 0.00633 | CCAGCAGATGGCAGT
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 175115672 | 175115686 | 7.81e-07 | 0.00662 | CCAGCAGAGGGCGCG
CCASYAGRKGGCRSY | MEME-4 | 10 | + | 103892184 | 103892198 | 7.93e-07 | 0.00662 | CCACTAGGGGGTGGT
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 234634784 | 234634798 | 7.93e-07 | 0.00662 | CCACCAGATGGCGCG
CCASYAGRKGGCRSY | MEME-4 | 2 | - | 97616882 | 97616896 | 7.95e-07 | 0.00662 | CCACTAGGTGGCGGG
CCASYAGRKGGCRSY | MEME-4 | 19 | - | 50486866 | 50486880 | 8.28e-07 | 0.00662 | CCACAAGGGGGCGAT
CCASYAGRKGGCRSY | MEME-4 | 8 | + | 98905399 | 98905413 | 8.28e-07 | 0.00662 | CCTCAAGGGGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 19 | + | 10338181 | 10338195 | 8.94e-07 | 0.00681 | CCAGTTGGGGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 14 | + | 78488312 | 78488326 | 9.07e-07 | 0.00681 | CCAGGAGGTGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 18 | + | 21202178 | 21202192 | 9.29e-07 | 0.00681 | CCACCAGAGGGCGGG
CCASYAGRKGGCRSY | MEME-4 | 4 | - | 86965138 | 86965152 | 9.29e-07 | 0.00681 | CCACAAGGTGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 65896770 | 65896784 | 9.46e-07 | 0.00681 | CCACTAGAGGGTACT
CCASYAGRKGGCRSY | MEME-4 | 14 | + | 88958517 | 88958531 | 9.73e-07 | 0.00687 | CCACCAGGGGGAACA
CCASYAGRKGGCRSY | MEME-4 | 19 | - | 35626256 | 35626270 | 1.1e-06 | 0.00762 | CCACCAGAGGGAGCA
CCASYAGRKGGCRSY | MEME-4 | 3 | + | 129209009 | 129209023 | 1.12e-06 | 0.00762 | CCACTAGATGGCAGA
CCASYAGRKGGCRSY | MEME-4 | 16 | - | 1614305 | 1614319 | 1.17e-06 | 0.00779 | CCAGCAGGGGGTGCC
CCASYAGRKGGCRSY | MEME-4 | 2 | - | 121716214 | 121716228 | 1.23e-06 | 0.00808 | CCAGTTGGGGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 20 | + | 4741175 | 4741189 | 1.28e-06 | 0.00825 | CCACGAGGGGGCGCG
CCASYAGRKGGCRSY | MEME-4 | 6 | + | 26026472 | 26026486 | 1.32e-06 | 0.00834 | CCGGCAGGGGGCGGT
CCASYAGRKGGCRSY | MEME-4 | 10 | + | 82204412 | 82204426 | 1.34e-06 | 0.00834 | CCTCTAGGTGGCAGT
CCASYAGRKGGCRSY | MEME-4 | 15 | - | 52432014 | 52432028 | 1.38e-06 | 0.00845 | TCACCAGGGGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 10 | - | 79734139 | 79734153 | 1.42e-06 | 0.00849 | CCAGTAGGAGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 1 | - | 201012012 | 201012026 | 1.44e-06 | 0.00849 | CCAGCAGGGGGAAGC
CCASYAGRKGGCRSY | MEME-4 | 10 | + | 134468195 | 134468209 | 1.51e-06 | 0.00849 | CCAGGAGATGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 7 | - | 6475235 | 6475249 | 1.53e-06 | 0.00849 | CCGCCAGGGGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 5 | - | 56433904 | 56433918 | 1.53e-06 | 0.00849 | CCAGAAGAGGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 7 | - | 1209484 | 1209498 | 1.58e-06 | 0.00849 | CCGCCAGGGGGAGCT
CCASYAGRKGGCRSY | MEME-4 | 9 | + | 89048854 | 89048868 | 1.58e-06 | 0.00849 | CCAGTAGAGGGAGCA
CCASYAGRKGGCRSY | MEME-4 | 6 | + | 125474642 | 125474656 | 1.58e-06 | 0.00849 | CCGGCAGGTGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 15 | + | 94707431 | 94707445 | 1.61e-06 | 0.00854 | CCTGCAGGGGGCAGT
CCASYAGRKGGCRSY | MEME-4 | 2 | + | 44706513 | 44706527 | 1.65e-06 | 0.00861 | CCAGTAGAGGGTACT
CCASYAGRKGGCRSY | MEME-4 | 3 | - | 50259222 | 50259236 | 1.68e-06 | 0.00867 | CCTCTAGAGGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 2 | - | 132249784 | 132249798 | 1.75e-06 | 0.00884 | CCGCTAGGGGGCGCG
CCASYAGRKGGCRSY | MEME-4 | 2 | + | 171217816 | 171217830 | 1.77e-06 | 0.00884 | CCAGCAGAGGGCAAC
CCASYAGRKGGCRSY | MEME-4 | 14 | + | 34145209 | 34145223 | 1.87e-06 | 0.00925 | CCTCTAGGTGGAGCT
CCASYAGRKGGCRSY | MEME-4 | 16 | - | 89233839 | 89233853 | 1.9e-06 | 0.00926 | CCGGCAGGGGGCAGT
CCASYAGRKGGCRSY | MEME-4 | 19 | - | 38747100 | 38747114 | 2e-06 | 0.00947 | CCGCCAGAGGGCGCA
CCASYAGRKGGCRSY | MEME-4 | 19 | + | 39600993 | 39601007 | 2e-06 | 0.00947 | CCAGCAGGTGGCGTC
CCASYAGRKGGCRSY | MEME-4 | 22 | + | 39858315 | 39858329 | 2.07e-06 | 0.00966 | CCTCCAGAGGGCAGC
CCASYAGRKGGCRSY | MEME-4 | X | - | 149885283 | 149885297 | 2.22e-06 | 0.0103 | CCGCAAGAGGGCGCC
CCASYAGRKGGCRSY | MEME-4 | X | - | 49969141 | 49969155 | 2.25e-06 | 0.0103 | CCAGCAGGGGGAGAT
CCASYAGRKGGCRSY | MEME-4 | 16 | + | 23814799 | 23814813 | 2.28e-06 | 0.0103 | CCAGAAGGGGGTGCT
CCASYAGRKGGCRSY | MEME-4 | 9 | + | 112665804 | 112665818 | 2.35e-06 | 0.0104 | CCACTAGATGGCCCT
CCASYAGRKGGCRSY | MEME-4 | 6 | + | 150044953 | 150044967 | 2.49e-06 | 0.0109 | CCAGTAGGGGGAGAC
CCASYAGRKGGCRSY | MEME-4 | 12 | - | 119850963 | 119850977 | 2.66e-06 | 0.0115 | ACAGTAGGTGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 17 | + | 13241092 | 13241106 | 2.71e-06 | 0.0116 | CCACTAGATGGCTCC
CCASYAGRKGGCRSY | MEME-4 | 7 | - | 116767611 | 116767625 | 2.74e-06 | 0.0116 | CCAGCAGGGGGTGCA
CCASYAGRKGGCRSY | MEME-4 | 8 | + | 22941635 | 22941649 | 2.82e-06 | 0.0118 | CCTGTAGAGGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 10 | + | 101244940 | 101244954 | 3.06e-06 | 0.0123 | CCTCCAGGTGGAGCC
CCASYAGRKGGCRSY | MEME-4 | 3 | - | 150213344 | 150213358 | 3.06e-06 | 0.0123 | CCACCAGGTGGAGAC
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 171614033 | 171614047 | 3.06e-06 | 0.0123 | TCAGTAGAGGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 1 | - | 246862442 | 246862456 | 3.08e-06 | 0.0123 | TCACTAGATGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 7 | - | 28133233 | 28133247 | 3.2e-06 | 0.0127 | CCACAGGGGGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 7 | - | 101457375 | 101457389 | 3.29e-06 | 0.0129 | CCGGTAGAGGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 1 | - | 39283798 | 39283812 | 3.35e-06 | 0.0129 | CCGCTAGATGGCAGC
CCASYAGRKGGCRSY | MEME-4 | X | - | 110087567 | 110087581 | 3.35e-06 | 0.0129 | CCTCTAGGGGGAGCA
CCASYAGRKGGCRSY | MEME-4 | 6 | + | 148466038 | 148466052 | 3.45e-06 | 0.013 | ACACCAGGGGGCGCA
CCASYAGRKGGCRSY | MEME-4 | 2 | - | 73162075 | 73162089 | 3.49e-06 | 0.013 | CCACAAGGGGGTGGC
CCASYAGRKGGCRSY | MEME-4 | 1 | - | 229650400 | 229650414 | 3.49e-06 | 0.013 | CCACAAGGGGGAGGA
CCASYAGRKGGCRSY | MEME-4 | 4 | - | 15397816 | 15397830 | 3.54e-06 | 0.013 | CCTCCAGATGGAGCT
CCASYAGRKGGCRSY | MEME-4 | 9 | - | 136218819 | 136218833 | 4.25e-06 | 0.0153 | CCAGTAGGGGGTGGA
CCASYAGRKGGCRSY | MEME-4 | 9 | - | 136218819 | 136218833 | 4.25e-06 | 0.0153 | CCAGTAGGGGGTGGA
CCASYAGRKGGCRSY | MEME-4 | 14 | - | 25148096 | 25148110 | 4.37e-06 | 0.0154 | ACACTAGAGGGCGCA
CCASYAGRKGGCRSY | MEME-4 | 5 | + | 30401580 | 30401594 | 4.5e-06 | 0.0154 | CCAGCTGAGGGCGGC
CCASYAGRKGGCRSY | MEME-4 | 15 | + | 44195954 | 44195968 | 4.5e-06 | 0.0154 | CCACAAGGGGTCGCT
CCASYAGRKGGCRSY | MEME-4 | 19 | - | 51597969 | 51597983 | 4.5e-06 | 0.0154 | CCACAAGGGGTCGCT
CCASYAGRKGGCRSY | MEME-4 | 12 | - | 58169632 | 58169646 | 4.5e-06 | 0.0154 | CCACTAGGTGGAAGG
CCASYAGRKGGCRSY | MEME-4 | 4 | - | 55299841 | 55299855 | 4.61e-06 | 0.0157 | CCAGCAGGAGGCAGT
CCASYAGRKGGCRSY | MEME-4 | 16 | - | 30609451 | 30609465 | 4.74e-06 | 0.016 | CCTGCAGGGGGCAGA
CCASYAGRKGGCRSY | MEME-4 | 10 | - | 80962249 | 80962263 | 4.8e-06 | 0.016 | CCGCTTGGGGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 8 | + | 6920999 | 6921013 | 5.03e-06 | 0.0166 | CCACCAGGAGGAGCC
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 32405398 | 32405412 | 5.17e-06 | 0.0169 | CCACCAGGTGGCCCA
CCASYAGRKGGCRSY | MEME-4 | 6 | - | 31036614 | 31036628 | 5.37e-06 | 0.0174 | CCACTAGGGGGCTAC
CCASYAGRKGGCRSY | MEME-4 | 15 | + | 65611142 | 65611156 | 6.02e-06 | 0.0194 | CCACTGGGTGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 4 | - | 17473945 | 17473959 | 6.13e-06 | 0.0195 | CCACTGGGTGGAGCT
CCASYAGRKGGCRSY | MEME-4 | 22 | - | 43742408 | 43742422 | 6.44e-06 | 0.0202 | TCACCAGGGGGAGCC
CCASYAGRKGGCRSY | MEME-4 | 16 | - | 71571559 | 71571573 | 6.44e-06 | 0.0202 | ACACCAGGTGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 149224347 | 149224361 | 6.5e-06 | 0.0202 | CCGGCAGGGGGAAGT
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 109820037 | 109820051 | 6.74e-06 | 0.0208 | CCGCCAGGTGGCAAC
CCASYAGRKGGCRSY | MEME-4 | 18 | + | 11732929 | 11732943 | 6.84e-06 | 0.0208 | CCGCCTGGTGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 20 | - | 2432761 | 2432775 | 6.88e-06 | 0.0208 | CCGGTAGAGGGTGCT
CCASYAGRKGGCRSY | MEME-4 | 9 | - | 26856387 | 26856401 | 7.22e-06 | 0.0217 | CCACTTGGTGGTGCT
CCASYAGRKGGCRSY | MEME-4 | 22 | + | 38503152 | 38503166 | 7.49e-06 | 0.022 | CCAGCAGAGGGCCCA
CCASYAGRKGGCRSY | MEME-4 | 22 | + | 20134767 | 20134781 | 7.69e-06 | 0.022 | CCACAGGGGGGCAGT
CCASYAGRKGGCRSY | MEME-4 | 8 | - | 25333165 | 25333179 | 7.69e-06 | 0.022 | CCACTGGGGGGCAGA
CCASYAGRKGGCRSY | MEME-4 | 9 | + | 33403328 | 33403342 | 7.69e-06 | 0.022 | CCTGTAGAGGGTGCC
CCASYAGRKGGCRSY | MEME-4 | 15 | - | 56344952 | 56344966 | 7.77e-06 | 0.022 | CCACTAGATGGAGAA
CCASYAGRKGGCRSY | MEME-4 | 6 | - | 99873655 | 99873669 | 7.77e-06 | 0.022 | CCGGAAGGGGGCGCG
CCASYAGRKGGCRSY | MEME-4 | 5 | + | 137946844 | 137946858 | 7.82e-06 | 0.022 | CCTGGAGGGGGAGCT
CCASYAGRKGGCRSY | MEME-4 | 2 | - | 175197345 | 175197359 | 7.82e-06 | 0.022 | CCAGCAGGGGGACCC
CCASYAGRKGGCRSY | MEME-4 | 14 | - | 105956880 | 105956894 | 7.98e-06 | 0.0223 | CCGCCAGGAGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 4 | - | 106117873 | 106117887 | 8.13e-06 | 0.0225 | CCAGTAGGGGGAGAG
CCASYAGRKGGCRSY | MEME-4 | 19 | - | 31187402 | 31187416 | 8.27e-06 | 0.0226 | CCTCTAGGTGGCTCC
CCASYAGRKGGCRSY | MEME-4 | 19 | - | 35503843 | 35503857 | 8.27e-06 | 0.0226 | CCACAAGGAGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 20 | - | 37360096 | 37360110 | 8.44e-06 | 0.0228 | CCGCTAGGGGGCGAG
CCASYAGRKGGCRSY | MEME-4 | 11 | + | 45894242 | 45894256 | 8.67e-06 | 0.0233 | CCAGTGGAGGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 11 | + | 125792905 | 125792919 | 8.94e-06 | 0.0238 | TCACAAGAGGGCGGT
CCASYAGRKGGCRSY | MEME-4 | 11 | - | 12915595 | 12915609 | 9.07e-06 | 0.0238 | CCTGAAGATGGCAGT
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 46907920 | 46907934 | 9.07e-06 | 0.0238 | ACTCCAGGTGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 3 | - | 60039261 | 60039275 | 9.39e-06 | 0.0243 | CCACAAGGAGGCACA
CCASYAGRKGGCRSY | MEME-4 | 20 | - | 61922566 | 61922580 | 9.39e-06 | 0.0243 | CCAGAGGAGGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 4 | - | 10551258 | 10551272 | 9.55e-06 | 0.0246 | CCACCAGGTGGAGAG
CCASYAGRKGGCRSY | MEME-4 | 17 | - | 62503500 | 62503514 | 9.7e-06 | 0.0248 | ACTCTAGAGGGCACT
CCASYAGRKGGCRSY | MEME-4 | 11 | + | 62283079 | 62283093 | 1.01e-05 | 0.0255 | CCACCAGATGGATCC
CCASYAGRKGGCRSY | MEME-4 | 8 | - | 29172209 | 29172223 | 1.05e-05 | 0.0262 | CCACTAGATGGCCAT
CCASYAGRKGGCRSY | MEME-4 | 12 | - | 54140349 | 54140363 | 1.05e-05 | 0.0262 | CCACAGGAGGGCGGC
CCASYAGRKGGCRSY | MEME-4 | 1 | - | 244615422 | 244615436 | 1.05e-05 | 0.0262 | CCTGCAGATGGCAGA
CCASYAGRKGGCRSY | MEME-4 | 2 | + | 99807010 | 99807024 | 1.11e-05 | 0.0273 | CCTGTAGGGGGCGAG
CCASYAGRKGGCRSY | MEME-4 | 11 | - | 17374891 | 17374905 | 1.12e-05 | 0.0273 | CCGGGAGGGGGCGCG
CCASYAGRKGGCRSY | MEME-4 | 16 | - | 84220524 | 84220538 | 1.12e-05 | 0.0273 | CCGGGAGGGGGCGCG
CCASYAGRKGGCRSY | MEME-4 | 10 | + | 72968793 | 72968807 | 1.14e-05 | 0.0273 | CCGCCTGGTGGCACC
CCASYAGRKGGCRSY | MEME-4 | 7 | + | 141354249 | 141354263 | 1.14e-05 | 0.0273 | ACTCTAGGGGGCAGT
CCASYAGRKGGCRSY | MEME-4 | 12 | - | 93043715 | 93043729 | 1.16e-05 | 0.0276 | CCACAGGGTGGCAGT
CCASYAGRKGGCRSY | MEME-4 | X | - | 151800918 | 151800932 | 1.2e-05 | 0.0284 | CCACTAGAGGGCCTC
CCASYAGRKGGCRSY | MEME-4 | 4 | + | 74021803 | 74021817 | 1.21e-05 | 0.0284 | CCAGGAGGGGGTACA
CCASYAGRKGGCRSY | MEME-4 | 22 | - | 19619566 | 19619580 | 1.22e-05 | 0.0285 | CCAGGAGGTGGTGGC
CCASYAGRKGGCRSY | MEME-4 | 9 | - | 131486945 | 131486959 | 1.35e-05 | 0.0315 | CCTGTAGGTGGTGGC
CCASYAGRKGGCRSY | MEME-4 | 18 | + | 3703624 | 3703638 | 1.37e-05 | 0.0315 | CCGCCAGAGGGAGAC
CCASYAGRKGGCRSY | MEME-4 | 19 | - | 41768127 | 41768141 | 1.37e-05 | 0.0315 | CCACTGGAGGGCGTC
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 1790025 | 1790039 | 1.4e-05 | 0.0315 | ACAGCAGATGGAGCT
CCASYAGRKGGCRSY | MEME-4 | 6 | + | 34165424 | 34165438 | 1.4e-05 | 0.0315 | CCAGGAGAGGGAGAC
CCASYAGRKGGCRSY | MEME-4 | 14 | + | 24685104 | 24685118 | 1.41e-05 | 0.0315 | CCTGGAGATGGCGCA
CCASYAGRKGGCRSY | MEME-4 | 20 | - | 42073691 | 42073705 | 1.41e-05 | 0.0315 | CCTGTAGGGGACGCT
CCASYAGRKGGCRSY | MEME-4 | 3 | + | 150439067 | 150439081 | 1.48e-05 | 0.0328 | ACACTAGAGGGAAGC
CCASYAGRKGGCRSY | MEME-4 | 15 | - | 41032012 | 41032026 | 1.5e-05 | 0.0329 | CCAGGAGAGGGAGTT
CCASYAGRKGGCRSY | MEME-4 | 22 | + | 22555466 | 22555480 | 1.52e-05 | 0.0329 | CCAGCAGGGGACGCG
CCASYAGRKGGCRSY | MEME-4 | 16 | + | 88470225 | 88470239 | 1.52e-05 | 0.0329 | CCGCCAGGGGGCCCA
CCASYAGRKGGCRSY | MEME-4 | 3 | + | 194054160 | 194054174 | 1.52e-05 | 0.0329 | CCACCGGGTGGCGGG
CCASYAGRKGGCRSY | MEME-4 | 5 | - | 139069021 | 139069035 | 1.55e-05 | 0.0335 | ACACCAGGGGGAGCG
CCASYAGRKGGCRSY | MEME-4 | 3 | + | 168582714 | 168582728 | 1.63e-05 | 0.035 | CCACAAGAGGGCCAT
CCASYAGRKGGCRSY | MEME-4 | 2 | + | 241790601 | 241790615 | 1.66e-05 | 0.0353 | CCGCTAGGTGTCACT
CCASYAGRKGGCRSY | MEME-4 | 7 | - | 101459037 | 101459051 | 1.71e-05 | 0.0363 | CCGCCAGGAGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 16 | + | 31466968 | 31466982 | 1.8e-05 | 0.0374 | CCTCCGGGGGGAGCT
CCASYAGRKGGCRSY | MEME-4 | 9 | - | 126964745 | 126964759 | 1.8e-05 | 0.0374 | TCAGAAGGTGGCAGT
CCASYAGRKGGCRSY | MEME-4 | 6 | + | 149886671 | 149886685 | 1.8e-05 | 0.0374 | CCTCCAGGGGTCGGC
CCASYAGRKGGCRSY | MEME-4 | 1 | - | 172370999 | 172371013 | 1.82e-05 | 0.0378 | CCTGCTGAGGGCAGT
CCASYAGRKGGCRSY | MEME-4 | 22 | - | 20098657 | 20098671 | 1.91e-05 | 0.0392 | CCTGTAGGGGGCATG
CCASYAGRKGGCRSY | MEME-4 | 4 | + | 169104845 | 169104859 | 1.91e-05 | 0.0392 | CCACTAGATGTCACG
CCASYAGRKGGCRSY | MEME-4 | 2 | - | 179279373 | 179279387 | 2.05e-05 | 0.0418 | TCACTAGGGGGAGAC
CCASYAGRKGGCRSY | MEME-4 | 7 | + | 139251410 | 139251424 | 2.1e-05 | 0.0425 | CCAGCGGGGGGCATC
CCASYAGRKGGCRSY | MEME-4 | 17 | + | 44270736 | 44270750 | 2.15e-05 | 0.0432 | CCGCCAGGAGGCGCG
CCASYAGRKGGCRSY | MEME-4 | 4 | - | 18023262 | 18023276 | 2.21e-05 | 0.0442 | CCTCCGGGGGGCGCG
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 227636760 | 227636774 | 2.23e-05 | 0.0443 | CCCCCAGAGGGCACC
CCASYAGRKGGCRSY | MEME-4 | 1 | - | 201191992 | 201192006 | 2.24e-05 | 0.0444 | CCACTAGAGGGATTT
CCASYAGRKGGCRSY | MEME-4 | 7 | - | 150759344 | 150759358 | 2.3e-05 | 0.045 | CCACGTGGGGGCAGG
CCASYAGRKGGCRSY | MEME-4 | 3 | - | 158152190 | 158152204 | 2.3e-05 | 0.045 | TCGCTAGGTGGCGCA
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 47993323 | 47993337 | 2.33e-05 | 0.0455 | ACTCTAGGGGGCGAC
CCASYAGRKGGCRSY | MEME-4 | 8 | - | 40851240 | 40851254 | 2.37e-05 | 0.0459 | CCACATGGTGGCAGG
CCASYAGRKGGCRSY | MEME-4 | 17 | + | 70721592 | 70721606 | 2.39e-05 | 0.046 | CCGCGTGGTGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 14 | - | 106873476 | 106873490 | 2.4e-05 | 0.046 | ACACTAGGGGGCTCA
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 32405410 | 32405424 | 2.46e-05 | 0.0469 | CCAGGAGGGGGTATT
CCASYAGRKGGCRSY | MEME-4 | 18 | - | 59169715 | 59169729 | 2.63e-05 | 0.0496 | ACAGGAGGTGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 9 | + | 140149476 | 140149490 | 2.63e-05 | 0.0496 | CCGGGTGAGGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 10 | - | 98590275 | 98590289 | 2.67e-05 | 0.05 | CCGCTAGGTGGTGGG
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 224701420 | 224701434 | 2.69e-05 | 0.0501 | CCGGGAGAGGGCGTC
CCASYAGRKGGCRSY | MEME-4 | 16 | + | 3151313 | 3151327 | 2.77e-05 | 0.0512 | ACGCTAGGGGGCGTT
CCASYAGRKGGCRSY | MEME-4 | 3 | + | 180520613 | 180520627 | 2.77e-05 | 0.0512 | ACTCTAGATGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 17 | - | 38511240 | 38511254 | 2.87e-05 | 0.0526 | CCACCGGGGGGCGTG
CCASYAGRKGGCRSY | MEME-4 | 5 | + | 79174522 | 79174536 | 2.87e-05 | 0.0526 | CCAGGTGAGGGCGAC
CCASYAGRKGGCRSY | MEME-4 | 17 | - | 21142954 | 21142968 | 2.93e-05 | 0.0534 | CCACTAGGGGTTACA
CCASYAGRKGGCRSY | MEME-4 | 17 | + | 65713729 | 65713743 | 3e-05 | 0.0543 | CCGCCAGAGGTCGCA
CCASYAGRKGGCRSY | MEME-4 | 22 | + | 20960466 | 20960480 | 3.02e-05 | 0.0543 | CCCCCAGAGGGCGCA
CCASYAGRKGGCRSY | MEME-4 | 19 | + | 51614848 | 51614862 | 3.11e-05 | 0.0557 | CCTGGTGGTGGCACT
CCASYAGRKGGCRSY | MEME-4 | 15 | - | 70390110 | 70390124 | 3.13e-05 | 0.0558 | CCACGTGGGGGCCCC
CCASYAGRKGGCRSY | MEME-4 | 11 | + | 67121839 | 67121853 | 3.18e-05 | 0.0564 | CCAGAAGAGGGAAAG
CCASYAGRKGGCRSY | MEME-4 | 5 | - | 114598108 | 114598122 | 3.22e-05 | 0.0569 | CCGGAAGGGGGCTGC
CCASYAGRKGGCRSY | MEME-4 | 4 | - | 127503885 | 127503899 | 3.24e-05 | 0.057 | CCACAAGTGGGAGCT
CCASYAGRKGGCRSY | MEME-4 | 14 | - | 79163692 | 79163706 | 3.31e-05 | 0.0579 | CCACTAGATGTCCCT
CCASYAGRKGGCRSY | MEME-4 | 1 | - | 14660345 | 14660359 | 3.51e-05 | 0.061 | CCTGTAGGGGGAAAG
CCASYAGRKGGCRSY | MEME-4 | 6 | - | 1382019 | 1382033 | 3.55e-05 | 0.0615 | CCGCGGGGTGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 15 | - | 83518354 | 83518368 | 3.61e-05 | 0.0622 | CCTGAAGGTGGAGTT
CCASYAGRKGGCRSY | MEME-4 | 5 | + | 149312309 | 149312323 | 3.65e-05 | 0.0626 | CCAGCAGAGGGCCAG
CCASYAGRKGGCRSY | MEME-4 | 7 | - | 142912116 | 142912130 | 3.68e-05 | 0.0628 | CCACTAGTGGGCAGG
CCASYAGRKGGCRSY | MEME-4 | 19 | + | 44617247 | 44617261 | 3.81e-05 | 0.0647 | CCGGCAGGTGGATCC
CCASYAGRKGGCRSY | MEME-4 | 4 | + | 55837764 | 55837778 | 3.89e-05 | 0.0657 | CCACTAGAGGGACAA
CCASYAGRKGGCRSY | MEME-4 | 7 | + | 142912121 | 142912135 | 4.13e-05 | 0.0695 | CCACTAGTGGGCGAA
CCASYAGRKGGCRSY | MEME-4 | 12 | + | 55118997 | 55119011 | 4.16e-05 | 0.0697 | CCCCTAGATGGCAGC
CCASYAGRKGGCRSY | MEME-4 | 22 | + | 38966233 | 38966247 | 4.24e-05 | 0.0705 | CCAGCGGGTGGCGAG
CCASYAGRKGGCRSY | MEME-4 | 17 | + | 37557770 | 37557784 | 4.27e-05 | 0.0705 | CCGGGAGGGGGAGGG
CCASYAGRKGGCRSY | MEME-4 | 12 | - | 56617972 | 56617986 | 4.27e-05 | 0.0705 | CCCGCAGGGGGAGCC
CCASYAGRKGGCRSY | MEME-4 | 16 | - | 2265120 | 2265134 | 4.3e-05 | 0.0705 | CCACGTGGTGGCCCC
CCASYAGRKGGCRSY | MEME-4 | 22 | + | 38966169 | 38966183 | 4.3e-05 | 0.0705 | CCTGGAGGGGGCTCA
CCASYAGRKGGCRSY | MEME-4 | 22 | - | 19619569 | 19619583 | 4.47e-05 | 0.0729 | CCGCCAGGAGGTGGT
CCASYAGRKGGCRSY | MEME-4 | 5 | - | 150494844 | 150494858 | 4.63e-05 | 0.0751 | CTAGCAGGGGGCAGT
CCASYAGRKGGCRSY | MEME-4 | 14 | + | 20923160 | 20923174 | 4.68e-05 | 0.0753 | CCACGTGGGGGCTCA
CCASYAGRKGGCRSY | MEME-4 | 18 | + | 60189952 | 60189966 | 4.68e-05 | 0.0753 | CCCCCAGGGGGCGGG
CCASYAGRKGGCRSY | MEME-4 | 16 | + | 71571563 | 71571577 | 4.75e-05 | 0.076 | CCACCTGGTGTCAGC
CCASYAGRKGGCRSY | MEME-4 | 7 | + | 101459103 | 101459117 | 4.96e-05 | 0.079 | TCTCAAGATGGCGGC
CCASYAGRKGGCRSY | MEME-4 | 11 | + | 65479184 | 65479198 | 5.03e-05 | 0.0798 | CCACAAGGAGACGCC
CCASYAGRKGGCRSY | MEME-4 | 1 | - | 178971866 | 178971880 | 5.16e-05 | 0.0815 | CCTGCAGGGGTCGTT
CCASYAGRKGGCRSY | MEME-4 | 6 | - | 150881040 | 150881054 | 5.3e-05 | 0.0833 | CCACATGGAGGAACT
CCASYAGRKGGCRSY | MEME-4 | 8 | - | 48873199 | 48873213 | 5.43e-05 | 0.085 | CCTCCGGGAGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 7 | + | 75508130 | 75508144 | 5.5e-05 | 0.0857 | CCGCGAGGAGGCGGA
CCASYAGRKGGCRSY | MEME-4 | 1 | - | 32405394 | 32405408 | 5.61e-05 | 0.0867 | CCACCTGGTGGTGAA
CCASYAGRKGGCRSY | MEME-4 | 11 | - | 111435846 | 111435860 | 5.61e-05 | 0.0867 | CCACCTGGTGGTGAA
CCASYAGRKGGCRSY | MEME-4 | 2 | - | 74692126 | 74692140 | 5.74e-05 | 0.0884 | CCGGCAGAGGGAGTG
CCASYAGRKGGCRSY | MEME-4 | 2 | + | 175089297 | 175089311 | 5.79e-05 | 0.0887 | CCACAAGGGGAAGAC
CCASYAGRKGGCRSY | MEME-4 | 17 | + | 79071697 | 79071711 | 5.82e-05 | 0.0888 | CCAGCGGGGGGTGGG
CCASYAGRKGGCRSY | MEME-4 | 4 | - | 3939604 | 3939618 | 5.92e-05 | 0.09 | CCAGAGGAGGGAGGA
CCASYAGRKGGCRSY | MEME-4 | 20 | - | 48909010 | 48909024 | 5.96e-05 | 0.0902 | CCGGAAGGGGTCAGC
CCASYAGRKGGCRSY | MEME-4 | 1 | + | 201672019 | 201672033 | 6.07e-05 | 0.0915 | CCTGCAGATGGTTCT
CCASYAGRKGGCRSY | MEME-4 | 22 | - | 28838196 | 28838210 | 6.15e-05 | 0.0922 | CCGCTGGGGGGCGAG
CCASYAGRKGGCRSY | MEME-4 | 19 | - | 5271168 | 5271182 | 6.3e-05 | 0.0942 | CCACAAGGGGTAATT
CCASYAGRKGGCRSY | MEME-4 | 9 | - | 132975097 | 132975111 | 6.46e-05 | 0.0957 | TCAGAAGGTGGAGGA
CCASYAGRKGGCRSY | MEME-4 | 6 | - | 157744352 | 157744366 | 6.46e-05 | 0.0957 | CCAGTTGGGGACGGA
CCASYAGRKGGCRSY | MEME-4 | 19 | + | 17358632 | 17358646 | 6.58e-05 | 0.0963 | CCGCCTGGGGGTGGA
CCASYAGRKGGCRSY | MEME-4 | 9 | - | 114857148 | 114857162 | 6.58e-05 | 0.0963 | TCACTAGGAGGCATT
CCASYAGRKGGCRSY | MEME-4 | 7 | - | 137928172 | 137928186 | 6.58e-05 | 0.0963 | CCAGCAGATGGTCAT
CCASYAGRKGGCRSY | MEME-4 | 22 | - | 41682204 | 41682218 | 6.66e-05 | 0.0971 | CCAGGGGAGGGCGAA
CCASYAGRKGGCRSY | MEME-4 | 21 | + | 40159277 | 40159291 | 6.82e-05 | 0.099 | CCTGGAGGTGGAATC
CCASYAGRKGGCRSY | MEME-4 | 6 | - | 157744411 | 157744425 | 6.86e-05 | 0.0992 | ACAGGAGGAGGCGGT
CCASYAGRKGGCRSY | MEME-4 | 2 | + | 106810930 | 106810944 | 7.03e-05 | 0.101 | CCGGAGGGGGGCACG
CCASYAGRKGGCRSY | MEME-4 | 10 | - | 74114351 | 74114365 | 7.19e-05 | 0.103 | CCTGGAGAAGGCACA
CCASYAGRKGGCRSY | MEME-4 | 17 | + | 4883842 | 4883856 | 7.33e-05 | 0.104 | CCACTGGGAGGCATC
CCASYAGRKGGCRSY | MEME-4 | 3 | + | 150213348 | 150213362 | 7.33e-05 | 0.104 | CCACCTGGTGGTTGT
CCASYAGRKGGCRSY | MEME-4 | 9 | + | 36487795 | 36487809 | 7.38e-05 | 0.105 | CCGCGAGGGGGCCGG
CCASYAGRKGGCRSY | MEME-4 | 22 | + | 49448050 | 49448064 | 7.68e-05 | 0.108 | CCACGGGAGGGAGGG
CCASYAGRKGGCRSY | MEME-4 | 5 | + | 172410545 | 172410559 | 7.81e-05 | 0.11 | TCACGTGGGGGCGCG
CCASYAGRKGGCRSY | MEME-4 | 10 | + | 31531773 | 31531787 | 8e-05 | 0.112 | CCAGCTGATGTCAGC
CCASYAGRKGGCRSY | MEME-4 | X | + | 107408558 | 107408572 | 8.14e-05 | 0.113 | CCAGAAGATGGCCAG
CCASYAGRKGGCRSY | MEME-4 | 7 | - | 148787736 | 148787750 | 8.14e-05 | 0.113 | CCCGCAGGAGGCGCT
CCASYAGRKGGCRSY | MEME-4 | 2 | - | 112792508 | 112792522 | 8.19e-05 | 0.113 | TCACTAGAGGGCCTC
CCASYAGRKGGCRSY | MEME-4 | 1 | - | 228271616 | 228271630 | 8.62e-05 | 0.118 | ACAGCAGAGGGCCAC
CCASYAGRKGGCRSY | MEME-4 | 11 | - | 65188611 | 65188625 | 8.67e-05 | 0.118 | ACAGAAGGTGGTGAT
CCASYAGRKGGCRSY | MEME-4 | 1 | - | 65896765 | 65896779 | 8.67e-05 | 0.118 | CCTCTAGTGGGCATT
CCASYAGRKGGCRSY | MEME-4 | 10 | - | 97515174 | 97515188 | 8.67e-05 | 0.118 | CCTGCAGGAGACGCT
CCASYAGRKGGCRSY | MEME-4 | 7 | - | 101151080 | 101151094 | 8.72e-05 | 0.118 | ACCCTAGAGGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 1 | - | 39874212 | 39874226 | 8.82e-05 | 0.119 | CCCGGAGAGGGCGCA
CCASYAGRKGGCRSY | MEME-4 | 12 | + | 108522696 | 108522710 | 9.06e-05 | 0.122 | ACAGAAGAGGACACT
CCASYAGRKGGCRSY | MEME-4 | 17 | - | 75830844 | 75830858 | 9.12e-05 | 0.123 | CCTGTAGGAGGAAGG
CCASYAGRKGGCRSY | MEME-4 | 8 | + | 38226074 | 38226088 | 9.28e-05 | 0.124 | CCACTTGAAGGAAAT
CCASYAGRKGGCRSY | MEME-4 | 19 | + | 8276671 | 8276685 | 9.49e-05 | 0.126 | CCTCCTGGAGGAGGT
CCASYAGRKGGCRSY | MEME-4 | 3 | + | 194871089 | 194871103 | 9.49e-05 | 0.126 | CCGCCTGGTGGCATG
CCASYAGRKGGCRSY | MEME-4 | 10 | + | 45868626 | 45868640 | 9.54e-05 | 0.126 | CCAGGAGTGGGCGGG
CCASYAGRKGGCRSY | MEME-4 | 5 | - | 10607855 | 10607869 | 9.6e-05 | 0.126 | TCACGAGAGGACGCC
CCASYAGRKGGCRSY | MEME-4 | 7 | + | 5492570 | 5492584 | 9.65e-05 | 0.126 | TCACTGGGTGGTACT
CCASYAGRKGGCRSY | MEME-4 | 5 | - | 138738229 | 138738243 | 9.65e-05 | 0.126 | TCCCTAGAGGGCGCC
CCASYAGRKGGCRSY | MEME-4 | 20 | - | 49050199 | 49050213 | 9.86e-05 | 0.129 | CCACTAGGTGACTGG

DEBUGGING INFORMATION

Command line:

    fimo --verbosity 1 --oc xstreme_example_output_files/fimo_out_2 --bgfile xstreme_example_output_files/background --motif CCASYAGRKGGCRSY xstreme_example_output_files/meme_out/meme.xml nrmix.nseqs.100.100bp.seed.1.fa

Settings:

        output_directory = xstreme_example_output_files/fimo_out_2
        MEME file name = xstreme_example_output_files/meme_out/meme.xml
        sequence file name = nrmix.nseqs.100.100bp.seed.1.fa

        background file name = xstreme_example_output_files/background
        alphabet = DNA
        max stored scores = 100000

        allow clobber = true
        compute q-values = true
        parse genomic coord. = true

        text only = false
        scan both strands = true
        max strand = false

        threshold type = p-value
        output theshold = 0.0001
        pseudocount = 0.1

        alpha = 1
        verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.

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