## MEME Suite Releases

The MEME Suite container is available under a limited, non-commercial use license. See the license details here. Information about commercial licensing is available here.

You can dowload and install the MEME Suite software in three different ways:

1. As a containerized Docker app for macOS or Windows by clicking here. The Docker container includes the current Motif and GOMo databases, but not the T-Gene database or sequence databases.
2. On macOS using MacPorts. If you have MacPorts installed, run `port install memesuite` to download and install the MEME Suite command line tools.
3. As source code for macOS, Linux, or Windows Subsystem for Linux. The source code releases are listed below, newest to oldest.

### Databases

These are the motif databases, GOMo seqence databases, T-Gene Histone+Expression databases and some of the genome sequence databases used on the MEME Suite website.

- Motif Databases (updated 20 Mar 2022)
- GOMo Databases (updated 17 Feb 2015)
- T-Gene Databases (updated 12 Oct 2019)
- (updated 15 Oct 2022)

  You can obtain sequence databases for use with your locally installed MEME Suite website in two ways.

  1. You can run the update-sequence-db provided with your locally installed version of the MEME Suite to download the same groups of genomes, proteomes and upstream sequences provided on the official MEME Suite Website.
  2. You can download one or more of the genome archives listed below and uncompress them. The archives in the table can be quite large; the Size column shows the download size and the uncompressed size in bytes. Refer to the installation instructions for installing MEME Suite from source or using Docker for how to make your chosen sequence database archive visible to your local MEME Suite website.

  Archive Name | Archive Contents | Size | Download
  --- | --- | --- | ---
  Human | hg16, hg17, hg18, hg19, hg38 | 4.4G / 15G | fasta_human.tgz
  Mouse | mm7, mm8, mm9, mm10, mm39 | 4.0G / 13G | fasta_mouse.tgz
  Rat | rn3, rn4, rn5, rn6, rn7 | 4.0G / 14G | fasta_rat.tgz
  Frog | xenTro1, xenTro2, xenTro3, xenTro7, xenTro9, xenTro10 | 2.5G / 8.6G | fasta_frog.tgz
  Zebrafish | danRer3, danRer4, danRer5, danRer6, danRer7, danRer10, danRer11 | 3.2G / 10G | fasta_zebrafish.tgz
  Drosophila | dm1, dm2, dm3, dm6 | 184M / 672M | fasta_fly.tgz
  Worm | ce2, ce4, ce6, ce10, ce11 | 166M / 601M | fasta_worm.tgz
  Yeast | sacCer1, sacCer2, sacCer3 and Schizosaccaromyces Pombe | 30M / 164M | fasta_yeast.tgz
  Arabidoposis thaliana | TAIR10 | 58M / 262M | fasta_arabidopsis.tgz
  Rice | IRGSP-1.0 | 133M / 499M | fasta_rice.tgz
  Model Organisms | Three newest versions of above genomes | 11G / 35G | fasta_model_organisms.tgz

### MEME Suite Software

These releases include the complete source code of the MEME Suite which can be compiled to run on OS X or Linux. They can be compiled on a Windows PC using a virtual machine (running Linux) or the Windows Subsystem for Linux.

Whenever possible use the patched version of the newest release otherwise refer to the readme (or patch readme) for patch installation instructions.

Version | Released | Patched | Readme | Distribution | Unpatched Distribution | Patches
--- | --- | --- | --- | --- | --- | ---
5.5.2 | April 9, 2023 |  |  | meme-5.5.2.tar.gz |  |
5.5.1 | February 4, 2023 |  |  | meme-5.5.1.tar.gz |  |
5.5.0 | October 9, 2022 |  |  | meme-5.5.0.tar.gz |  |
5.4.1 | August 25, 2021 |  |  | meme-5.4.1.tar.gz |  |
5.4.0 | August 22, 2021 |  |  | meme-5.4.0.tar.gz |  |
5.3.3 | February 21, 2021 |  |  | meme-5.3.3.tar.gz |  |
5.3.2 | February 7, 2021 |  |  | meme-5.3.2.tar.gz |  |
5.3.1 | January 29 2021 |  |  | meme-5.3.1.tar.gz |  |
5.3.0 | November 29 2020 |  |  | meme-5.3.0.tar.gz |  |
5.2.0 | October 24 2020 |  |  | meme-5.2.0.tar.gz |  |
5.1.1 | February 1 2020 |  |  | meme-5.1.1.tar.gz |  |
5.1.0 | October 12 2019 |  |  | meme-5.1.0.tar.gz |  |
5.0.5 | March 19 2019 |  |  | meme-5.0.5.tar.gz |  |
5.0.4 | January 25 2019 |  |  | meme-5.0.4.tar.gz |  |
5.0.3 | December 02 2018 |  |  | meme-5.0.3.tar.gz |  |
5.0.2 | August 30 2018 |  |  | meme-5.0.2.tar.gz |  |

5.0.1

June 21 2018

July 31 2018

Readme

meme_5.0.1_1.tar.gz

meme_5.0.1.tar.gz

- patch_5.0.1_1

5.0.0

June 07 2018

June 13 2018

Readme

meme_5.0.0_1.tar.gz

meme_5.0.0.tar.gz

- patch_5.0.0_1

4.12.0 | June 27 2017 |  |  | meme_4.12.0.tar.gz |  |

4.11.4

Apr 06 2017

May 18 2017

Readme

meme_4.11.4_1.tar.gz

meme_4.11.4.tar.gz

- patch_4.11.4_1

4.11.3

Feb 21 2017

March 11 2017

Readme

meme_4.11.3_1.tar.gz

meme_4.11.3.tar.gz

- patch_4.11.3_1

4.11.2

May 05 2016

Oct 24 2016

Readme

meme_4.11.2_2.tar.gz

meme_4.11.2.tar.gz

- patch_4.11.2_1
- patch_4.11.2_2

4.11.1 | Jan 07 2016 |  |  | meme_4.11.1.tar.gz |  |
4.11.0 | Dec 07 2015 |  |  | meme_4.11.0.tar.gz |  |
4.10.2 | July 20 2015 |  |  | meme_4.10.2.tar.gz |  |

4.10.1

Mar 19 2015

Jun 15 2015

Readme

meme_4.10.1_4.tar.gz

meme_4.10.1.tar.gz

- patch_4.10.1_1
- patch_4.10.1_2
- patch_4.10.1_3
- patch_4.10.1_4

4.10.0

May 21 2014

Feb 2 2015

Readme

meme_4.10.0_4.tar.gz

meme_4.10.0.tar.gz

- patch_4.10.0_1
- patch_4.10.0_2
- patch_4.10.0_3
- patch_4.10.0_4

4.9.1

Aug 23 2013

May 8 2014

Readme

meme_4.9.1_2.tar.gz

meme_4.9.1.tar.gz

- patch_4.9.1_1
- patch_4.9.1_2

4.9.0

Oct 3 2012

Jan 31 2013

Readme

meme_4.9.0_4.tar.gz

meme_4.9.0.tar.gz

- patch_4.9.0_1
- patch_4.9.0_2
- patch_4.9.0_3
- patch_4.9.0_4

4.8.1

Feb 7 2012

Sep 17 2012

Readme

meme_4.8.1.tar.gz

- patch_4.8.1_1
- patch_4.8.1_2
- patch_4.8.1_3
- patch_4.8.1_4
- patch_4.8.1_5

4.8.0 | Jan 27 2012 | n/a | - | meme_4.8.0.tar.gz | meme_4.8.0.tar.gz |
4.7.0 | Sep 29 2011 | n/a | - | meme_4.7.0.tar.gz | meme_4.7.0.tar.gz |

4.6.1

Mar 30 2011

May 30 2011

-

meme_4.6.1.tar.gz

- meme_4.6.1.patch_1 (readme)
- meme_4.6.1.patch_2 (readme)

4.6.0

Jan 28 2011

Feb 2 2011

-

meme_4.6.0.tar.gz

- meme_4.6.0.patch_1 (readme)

4.5.0

Oct 14 2010

Dec 9 2010

-

meme_4.5.0.tar.gz

- meme_4.5.0.patch_1 (readme)

4.4.0

May 7 2010

Aug 14 2010

-

meme_4.4.0.tar.gz

- meme_4.4.0.patch_1
- meme_4.4.0.patch_2 (readme)
- meme_4.4.0.patch_3 (readme)
- meme_4.4.0.patch_4 (readme
- meme_4.4.0.patch_5 (readme)
- meme_4.4.0.patch_6 (readme)
- meme_4.4.0.patch_7 (readme)

4.3.0

Oct 7 2009

Apr 28 2010

-

meme_4.3.0.tar.gz

- gendb.4.3.0.patch (readme)
- psp.4.3.0.patch

4.2.0 | Jul 22 2009 | n/a | - | meme_4.2.0.tar.gz | meme_4.2.0.tar.gz |
4.1.1 | Jul 14 2009 | n/a | - | meme_4.1.1.tar.gz | meme_4.1.1.tar.gz |
4.1.0 | Mar 4 2009 | n/a | - | meme_4.1.0.tar.gz | meme_4.1.0.tar.gz |
4.0.0 | Oct 21 2008 | n/a | - | meme_4.0.0.tar.gz | meme_4.0.0.tar.gz |
3.5.7 | Dec 19 2007 | n/a | - | meme_3.5.7.tar.gz | meme_3.5.7.tar.gz |

3.5.4

Sep 22 2006

Sep 10 2007

Readme

meme_3.5.4.tar.gz

- meme_3.5.4.patch_1
- meme_3.5.4.patch_2

3.5.3 | Apr 30 2006 | n/a | - | meme_3.5.3.tar.gz | meme_3.5.3.tar.gz |
3.5.2 | Mar 2 2006 | n/a | - | meme_3.5.2.tar.gz | meme_3.5.2.tar.gz |
3.5.1 | Feb 1 2006 | n/a | - | meme_3.5.1.tar.gz | meme_3.5.1.tar.gz |

3.5.0

Oct 5 2005

Jan 20 2006

-

meme_3.5.0.tar.gz

- mast-client.txt.3.5.0.patch (or replacement mast-client.txt)

3.0.14 | Jul 19 2005 | n/a | - | meme-3.0.14.tar.gz | meme-3.0.14.tar.gz |
3.0.13 | Nov 1 2004 | n/a | - | meme.3.0.13.tar.Z | meme.3.0.13.tar.Z |
3.0.10 | Aug 24 2004 | n/a | - | meme.3.0.10.tar.Z | meme.3.0.10.tar.Z |
3.0.9 | Aug 19 2004 | n/a | - | meme.3.0.9.tar.Z | meme.3.0.9.tar.Z |
3.0.8 | Jul 27 2004 | n/a | - | meme.3.0.8.tar.Z | meme.3.0.8.tar.Z |
3.0.6 | Jul 21 2004 | n/a | - | meme.3.0.6.tar.Z | meme.3.0.6.tar.Z |
3.0.5 | Jul 16 2004 | n/a | - | meme.3.0.5.tar.Z | meme.3.0.5.tar.Z |
3.0.4 | Apr 2 2002 | n/a | - | meme.3.0.4.tar.Z | meme.3.0.4.tar.Z |
3.0.3 | Mar 5 2001 | n/a | - | meme.3.0.3.tar.Z | meme.3.0.3.tar.Z |
3.0.2 | Feb 21 2001 | n/a | - | meme.3.0.2.tar.Z | meme.3.0.2.tar.Z |
2.3.0 | Nov 9 1998 | n/a | - | meme.2.3.beta.tar.Z | meme.2.3.beta.tar.Z |
2.2.2 | Apr 9 1998 | n/a | - | meme.2.2.2.tar.Z | meme.2.2.2.tar.Z |
2.2.1 | ? | n/a | - | meme.2.2.1.tar.Z | meme.2.2.1.tar.Z |
2.2.0 | ? | n/a | - | meme.2.2.tar.Z | meme.2.2.tar.Z |
2.1.0 | ? | n/a | - | meme.2.1.tar.Z | meme.2.1.tar.Z |
2.0.0 | ? | n/a | - | meme.2.0.tar.Z | meme.2.0.tar.Z |
1.4.3 | ? | n/a | - | meme.1.4.3.tar.Z | meme.1.4.3.tar.Z |
1.4.0 | ? | n/a | - | meme.1.4.tar.Z | meme.1.4.tar.Z |
1.3.0 | ? | n/a | - | meme.1.3.tar.Z | meme.1.3.tar.Z |
1.2.0 | ? | n/a | - | meme.1.2.tar.Z | meme.1.2.tar.Z |