fimo
fimo --parse-genomic-coord --verbosity 1 --oc xstreme_example_output_files/fimo_out_5 --bgfile xstreme_example_output_files/background --motif 3-GCGCATGCGCAC xstreme_example_output_files/streme_out/streme.xml nrmix.nseqs.100.100bp.seed.1.fa
xstreme_example_output_files/streme_out/streme.xml
nrmix.nseqs.100.100bp.seed.1.fa
0.0001
GCGCGTGCGCAC
0.0135
GCGCACGCGCGC
0.0173
GAGCGCGCGCGC
0.128
GCGCGCGTGCGC
0.129
ACGCGTGCGCAC
0.0262
GCGCACGCGTGG
0.09
GCGCCTGCGCGC
0.0207
GAGCCTGCGCAA
0.0485
GCGCAGGCGCCG
0.09
GCGCAGGCTCAA
0.132
GCGCATGCGCGT
0.0231
GCGCCTGCGCGG
0.0319
GCGCAGGCGCGT
0.0854
GCGCACGCGCGC
0.0173
GCGCGTGCGCAG
0.0183
GCGCGCGTGCGC
0.129
GCGCATCCGCAC
0.0241
GCGGATGCGCCC
0.09
GCGCATGTGCAA
0.0207
GCGCGTGTGCAC
0.0315
GCACATGCGCGC
0.0434
ACGCACGCGCGA
0.0638
GCACACGCGCAG
0.0674
GCGCGTGCGTGC
0.0793
AGGCACGCGCAG
0.112
TCGCCTGCGCGC
0.114
GCGCACGTGCAC
0.0231
GAGCACGCGCAG
0.0341
GCGCACGCACGC
0.0895
GCGGGCGCGCAC
0.128
GCACATGCACAC
0.119
GGGCACGCGCAA
0.0459
GGGCATGCACAA
0.131
GCGCCTGCGCAC
0.0123
GCGCAGGCGCAG
0.0231
GCGGATGCGCGT
0.132
GCGCATGCGCGG
0.0146
GCGCATGCGCCG
0.0243
GCGCGCGCGCAC
0.0216
GCGCGCGCGCGC
0.0434
GCGCGCGCGCGC
0.0434
GCGCGCGCGCGC
0.0434
GCGCGCGCGCGC
0.0434
GCGCGCGTGCAC
0.0621
ACGCGCGCGCGC
0.109
GCGCGCGCACAC
0.118
GCGCGCGCGCGT
0.124
GCGCGTGCACGC
0.124
GCGCCTGCGCCG
0.0616
GCGCGCGCGCCC
0.0836
GAGCGCGCGCGC
0.128
GCGCAGGCGCGC
0.0283
GCGCCTGCGCCC
0.0391
GCGCATGCGCGC
0.0112
GCGCATGCGCGA
0.0156
GCGCATGCGCGG
0.0146
GCGCATGCGCTG
0.131
GCGCAGGCGCAT
0.0399
ACGCGTGCGCAA
0.0459
GCGCCTCCGCGC
0.128
GCGCACGCGCAC
0.0102
GCGCGTGCGCCG
0.0674
GCGCCTGCGCCC
0.0391
GCGCAGGCGCGT
0.0854
GCGCAGGTGCGC
0.09
GCGCCCGCCCAC
0.122
ACGCACGTGCGC
0.115
GCGCACGTGCGT
0.129
GCGCGAGCGCAG
0.0718
GCGCCCCCGCAC
0.123
GCGCCCGCGCGC
0.0417
GCGCGGGCGCGC
0.0865
GCGCCTGCGCGC
0.0207
GCGCAGGCGCGC
0.0283
GCGCGCGCGCCC
0.0836
ACGCGCGCGCGC
0.109
GCGCGCGCGCGT
0.124
GCGCCTGCGCGC
0.0207
GCGCAGGCGCCG
0.09
GCGCATGCGCAG
0.00805
GCGCATGCGCCC
0.0163
ACGCCTGCGCAC
0.0248
ACGCATGTGCAT
0.0834
GGGCATGCTCAG
0.126
GCGCCTGTGCCC
0.118
GCGGCTGCGCAG
0.104
GCGCGTGCGCAA
0.0191
GCGCACGCGCGT
0.0434
GAGCATGTGCAC
0.0319
GCGCACGCGCAC
0.0102
GCGCGTGCGCAA
0.0191
ACGCCTGCGCGC
0.0483
ACGCAAGCGCGC
0.0794
GCGCCTGCGCGA
0.0346
GCGCAGGCGCCG
0.09
ACACATGCGCGC
0.11
GCGCATGTGTGG
0.13
GCGCATGTGCAA
0.0207
GCACATGCGCGA
0.0792
GCGCATGCGCAC
0.00805
GCGCATGCGCGG
0.0146
GCGCACGCGCAC
0.0102
GCGCGTGCGCAG
0.0183
GAGCCTGCGCAG
0.0466
GCGCCTGCGCAC
0.0123
GCGCAGGCGCGG
0.0459
GCGCATGCGCAG
0.00805
GCGCCTGCGCGC
0.0207
GCGCAGGCGCAG
0.0231
GCGCATGCGCCG
0.0243
GCGCCTGCGCAT
0.0283
GCGCAGGCGCGC
0.0283
ACGCACGCGCAC
0.0187
GCGCGTGCGTGG
0.126
ACGCCTGCGCAC
0.0248
GCGCAGGCGTAG
0.0832
GGGCATGCGCGG
0.0459
GCGCATGCCCGC
0.0459
ACGCATGCGCAG
0.0173
GCGCATGCGTGA
0.0459
GCGCAGGCGCAA
0.0243
GCGCCTGCGCGG
0.0319
GGGCATGCGCAA
0.0243
GCGCATGCCCAG
0.0381
GCGCATGCGCGC
0.0112
GCGCATGCGCTG
0.131
AGGCATGCGCAA
0.0568
GCGCATGCGCAC
0.00805
GCGCATGCGCAC
0.00805
GCGCGTGCGCAC
0.0135
GCGCACGCGCGG
0.0248
GAGCATGCGCAG
0.0189
GCGCATGCTCCC
0.0836
GCGCACGCGCAG
0.0146
GCGCGTGCGCGA
0.0392
GAGCATGCGCAT
0.03
ACGCCTGCGCAG
0.0417
GCGCAGCCGCAC
0.09
GCGCAGGCGTGC
0.102
GCGGCTGCGCGC
0.128
GCGCATGCGCAC
0.00805
GCGCATGCGCGG
0.0146
GCGCCTGCGTGC
0.0733
GAGCATGCGCGC
0.0231
GCGCATGCTCGC
0.0434
GCGCCTGCGCAG
0.018
GCGCAGGCGCAG
0.0231
GCGCATGCGCGG
0.0146
GCGCATGCGCCC
0.0163
GCGCATGCGCGG
0.0146
GCGCATGCGCGG
0.0146
GCGCATGCTCAG
0.0321
GAGCATGCGCCG
0.0695
GCGCACGCGCGC
0.0173
GCGCGTGCGCGC
0.0231
GCGCGCGTGCGC
0.129
GGGCATGCGCAC
0.0162
GCGCATGCCCGC
0.0459
CCGCATGCGCAG
0.129
GCGCACGCGCAG
0.0146
GCGCATGTGCGG
0.0391
GCACATGCGCGG
0.0733
AGGCATGCGCAG
0.0542
GCGCATGCGCAG
0.00805
GCGCATGCGCCC
0.0163
GCGCACGCGCAC
0.0102
GCGCGTGCGCAT
0.0292
ACGCATGCGCCC
0.0341
GCGCATGCGTCA
0.09
GCGCGTGCGCAC
0.0135
GCGCACGCGCGT
0.0434
GCGCGTGCGCAC
0.0135
GCGCACGCGCGC
0.0173
GCGCGCGTGCGC
0.129
GCGCCTGCGCGG
0.0319
GCGCAGGCGCCG
0.09
GCGCATGCGCAC
0.00805
GCGCATGCGCGG
0.0146
GCGCCTGCGCGT
0.0563
GCGCAGGCGCCG
0.09
GCGCAGGCGCAG
0.0231
GAGCATGCGCGC
0.0231
GCGCCTGCGCCA
0.0674
GCGCCTGCGCCG
0.0616
GCGCAGGCGCAC
0.0163
GCGCCTGCGCGC
0.0207
ACGCACGCGCAA
0.03
GCGCACGCGCAG
0.0146
GCGCGTGCGCAG
0.0183
GCGCATGCCCAG
0.0381
GGGCATGCGCCA
0.0941
GCGCATGTGCAG
0.0191
GCACATGCGCGC
0.0434
GCGCCTGCGCGT
0.0563
GCGCAGGCGCCG
0.09
GCGCATGCGCAG
0.00805
GCGCATGCGCCC
0.0163
GCGCGGGCGCAT
0.116
GCGCCCGCGCCG
0.124
GCGCAGGCGCGC
0.0283
ACGCACGCGCGC
0.0378
GCGCCTGCGCCG
0.0616
GCGCGTGCGTGA
0.131
GCGCCTGCGCAC
0.0123
GCGCCTGCGCAA
0.0183
GCGCAGGCGCGG
0.0459
GCGCAGGCGCGA
0.0478
GCGCACGCGCAA
0.0146
GCGCGTGCGCGC
0.0231
GCACACGCGCAC
0.0434
GCGCGTGTGCGC
0.0674
GCGCGCGCACAC
0.118
GCGTGTGCGCGC
0.125
GCGCGCGCGCAC
0.0216
GCGCACGCACAC
0.0423
GCGCGCGCGCGC
0.0434
GCGCGCGCGCGC
0.0434
GCGCGCGCGCGC
0.0434
GCGCGCGCGCGC
0.0434
GCGCGCGCGCGC
0.0434
GCGCGCGCGCGC
0.0434
GCGCGCGCGCAT
0.0568
GCGCCTGCGCAC
0.0123
GCGCATGCGCAG
0.00805
GCGCATGCGCCA
0.0249
GCGCAGGCGTAC
0.0466
GCGCATGCGCGC
0.0112
GCGCATGCGCCC
0.0163
GGGCATGCGCAA
0.0243
GCGCCTGCCCAC
0.0607
GGGCAGGCGCAG
0.0899
GCGCACGCGCAC
0.0102
GCGCGTGCGCAT
0.0292
GAGCCCGCGCGC
0.121
GAGCATGCCCAG
0.114
GCGGAAGCGCAC
0.0951
GCGCCTGCGCAC
0.0123
GCGCAGGCGCGG
0.0459
GCGCCTGCGCGC
0.0207
GCGCAGGCGCAG
0.0231
GGGCATGCGCGG
0.0459
GCGCATGCCCGG
0.0814
GAGCCCGCGCAC
0.0559
GCGCCTGTGCCC
0.118
GCACAGGCGCAG
0.128
GAGCAGGCGCAG
0.0674
GCGCCCGCGCGC
0.0417
GCGCGGGCGCGG
0.132
GCGCCTCCGCGC
0.128
GAGCATGTGTAC
0.118
GCGCAAGCGCAA
0.0256
GCGCCTGCGCAG
0.018
GCGCGCGCGCCC
0.0836
ACGCGCGCGCGC
0.109
GCGCGCGCGCGT
0.124
GAGCATGCGCGA
0.0402
GCGCACGCGCAC
0.0102
GCGCGTGCGCGC
0.0231
GCGTCTGCGCAC
0.0542
GCGCAGGCGCAA
0.0243
GCGCCTGCGCGG
0.0319
TCGCATGCGCGC
0.0434
GCGCGCGCGCAC
0.0216
GCGCGCGCGCGG
0.0722
GCGCATGCGTAA
0.0231
ACGCATGCGCCC
0.0341
ACGCACGCGCGC
0.0378
GCGCGTGCGTGC
0.0793
GCGGCTGCGCGC
0.128
ACGCCTGCGCAC
0.0248
GCGCAGGCGTAC
0.0466
ACGCAGGCGCGG
0.118
ACGCAGGCGCAG
0.0543
GCGGATGCGCCC
0.09
GCGCACGCGCAT
0.0207
GCGCGTGCGCGC
0.0231
GCGCATGCGCGA
0.0156
GCGCACGTGCAT
0.0616
yes