fimo
fimo --parse-genomic-coord --verbosity 1 --oc xstreme_example_output_files/fimo_out_7 --bgfile xstreme_example_output_files/background --motif GACTACAWYTCCCAG xstreme_example_output_files/meme_out/meme.xml nrmix.nseqs.100.100bp.seed.1.fa
xstreme_example_output_files/meme_out/meme.xml
nrmix.nseqs.100.100bp.seed.1.fa
0.0001
AACTACAAGTCCCAT
0.00244
GACCACAAGTCACCG
0.416
GACTCCATTTCCCGT
0.0386
GACTCCGTTACCCAG
0.314
GACTACACTTCCCAG
0.000862
AACTACAGCTCCCAG
0.0112
GACCACAACTCCCAC
0.00244
CACCATGCCTCCCAT
0.409
GTCCACAATGCCCAG
0.314
ACCTACAATTCACAT
0.0902
CAACACAATTCACAT
0.31
AACTACCCGTCCCAT
0.169
GCCCCCGACTCCCGC
0.416
GCCGCCATTTCCCAG
0.343
CACTGCAACACCCAG
0.4
CCGCACGTCTCCCAG
0.314
ACCTCCACCTCCCAC
0.31
AACCACCACACCCAG
0.386
ACCTACATTTCCCGC
0.0112
GCCTACATCTCCCAC
0.00358
AACTACATCTCCCAG
0.000215
CACCACGTTGCCCAT
0.246
GACCACAGCTCTCAG
0.269
AACCACATCTTGCAG
0.343
CAATGCACCTCCCAC
0.433
ACCTAGAAGTCCCAG
0.11
AACTACAATACCCAC
0.0425
AACTCCATCTCCCAG
0.0137
TACTACAGTTCCCAG
0.132
GACCACAGCTCTCAT
0.336
GAATACATTTCCCAG
0.000999
AATTACACCTTCCAG
0.416
GACCACCACTCCAAC
0.445
AACCACCTTTCCCAA
0.323
GCCCAAGCTTCCCAG
0.31
GACTACGCGTTCCAG
0.143
CCCCACATTCCCCAG
0.213
AACTACGCCTCCCAG
0.00469
GACCACAACTCCCAT
0.00162
AACTACAACTCCCAG
0.00027
AACCACAACTCCCGG
0.00358
CACTCCGCCTCCCGT
0.416
GCACACACTCCCCAG
0.386
GCCTACATTTCCCTA
0.314
AACAACCACTCCCAG
0.265
GACCATAACTCCAAG
0.31
CCCCACCACTCCCGG
0.324
AACTACAACGTCCGG
0.386
CACTACAATTCCCAT
0.00244
CCCTCCGTGTCCCGG
0.445
GCACACACCGCCCAG
0.397
GAACACAACTTCCGG
0.168
CACCACAAGTCCAGT
0.343
GCCTAGAACTCCCCG
0.343
GGCGACAATTCCCAC
0.323
GACTACAAATCCCAG
0.00625
CACCGCAAGTCCCGC
0.423
GCCTCCGAGTCCCGG
0.27
GACTACAAGTCCCGG
0.00204
GACTAGGGGTCCCAG
0.374
GACTACGTTTCCCAG
0.000422
GTCCACAGCTCCCAG
0.27
AACTACATTTCCCAG
0.000207
GACTACATTTCCCAG
6.83e-05
GCCTGCAATTACCAG
0.346
GACTCCATTTCCCAG
0.0094
GACTACAACTCCCGG
0.000709
GACTACATCTCCCAG
0.000103
GACTACATTTCCCAG
6.83e-05
GACTACATGGCCTAC
0.44
GACTACGATTCCCAG
0.000625
AACTACCACTCCCAG
0.0137
GACTACGACTCCCGT
0.00401
GACTACATCTCCCAG
0.000103
GACTACATTTCCCAG
6.83e-05
AAACACCCCTCCCAC
0.416
GACTACATTTCCCAG
6.83e-05
GAACAAATATCCCAG
0.423
GCCCACGTCTCCCAG
0.00625
yes