
package:
  name: lumpy-sv
  version: 0.2.13

source:
  fn: lumpy-sv-v0.2.13.tar.gz
  url: https://github.com/arq5x/lumpy-sv/releases/download/0.2.13/lumpy-sv-v0.2.13.tar.gz
  sha256: 1a7a5d18875b297acaa68ee1e864ca048654ebc85348920b518dc689d2b7a3cf

build:
  number: 0
  skip: True # [not py27]

requirements:
  build:
    - zlib
    - gcc

  run:
    - zlib
    - python
    - samtools
    - gawk
    - libgcc
    - pysam
    - numpy

test:
    commands:
      - 'lumpy 2>&1 | grep -q structural'
      - 'lumpyexpress 2>&1 | grep -q lumpyexpress'

about:
    home: https://github.com/arq5x/lumpy-sv
    license: MIT
    summary: a general probabilistic framework for structural variant discovery
