# This file created by conda-build 3.21.8
# meta.yaml template originally from:
# /opt/recipe, last modified Sat Nov 19 11:28:18 2022
# ------------------------------------------------

package:
  name: locarna
  version: 2.0.0
source:
  patches:
    - strip-fno-lto.patch
  sha256: 3be0d2cac7f7451f8b741983e22803b546de2074d837b425fb1b69ccc718ebbc
  url: https://github.com/s-will/LocARNA/releases/download/v2.0.0/locarna-2.0.0.tar.gz
build:
  number: '0'
  string: pl5321h9f5acd7_0
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - binutils_impl_linux-64 2.39 h6ceecb4_0
    - binutils_linux-64 2.39 h5fc0e48_11
    - gcc_impl_linux-64 10.4.0 h5231bdf_19
    - gcc_linux-64 10.4.0 h9215b83_11
    - gxx_impl_linux-64 10.4.0 h5231bdf_19
    - gxx_linux-64 10.4.0 h6e491c6_11
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - ld_impl_linux-64 2.39 hc81fddc_0
    - libgcc-devel_linux-64 10.4.0 hd38fd1e_19
    - libgcc-ng 12.2.0 h65d4601_19
    - libgomp 12.2.0 h65d4601_19
    - libsanitizer 10.4.0 h5246dfb_19
    - libstdcxx-devel_linux-64 10.4.0 hd38fd1e_19
    - libstdcxx-ng 12.2.0 h46fd767_19
    - make 4.3 hd18ef5c_1
    - sysroot_linux-64 2.12 he073ed8_15
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - bzip2 1.0.8 h7f98852_4
    - ca-certificates 2022.9.24 ha878542_0
    - ld_impl_linux-64 2.39 hc81fddc_0
    - libffi 3.4.2 h7f98852_5
    - libgcc-ng 12.2.0 h65d4601_19
    - libgomp 12.2.0 h65d4601_19
    - libnsl 2.0.0 h7f98852_0
    - libsqlite 3.40.0 h753d276_0
    - libstdcxx-ng 12.2.0 h46fd767_19
    - libuuid 2.32.1 h7f98852_1000
    - libzlib 1.2.13 h166bdaf_4
    - ncurses 6.3 h27087fc_1
    - openssl 3.0.7 h166bdaf_0
    - perl 5.32.1 2_h7f98852_perl5
    - pip 22.3.1 pyhd8ed1ab_0
    - python 3.10.6 ha86cf86_0_cpython
    - python_abi 3.10 2_cp310
    - readline 8.1.2 h0f457ee_0
    - setuptools 65.5.1 pyhd8ed1ab_0
    - tk 8.6.12 h27826a3_0
    - tzdata 2022f h191b570_0
    - viennarna 2.5.1 py310pl5321hc8f18ef_0
    - wheel 0.38.4 pyhd8ed1ab_0
    - xz 5.2.6 h166bdaf_0
  run:
    - libgcc-ng >=12
    - libstdcxx-ng >=12
    - perl
    - viennarna ==2.5.1
    - viennarna >=2.5.1,<2.6.0a0
test:
  commands:
    - mlocarna --version
    - locarna --version
    - locarna_p --version
    - sparse --version
    - exparna_p --version
    - echo -e ">D10744\nGGAAAAUUGAUCAUCGGCAAGAUAAGUUAUUUACUAAAUAAUAGGAUUUAAUAACCUGGUGAGUUCGAAUCUCACAUUUUCCG"
      | locarna_rnafold_pp --in-loop --stacking --noLP -p0.5 |head -n3
about:
  home: https://s-will.github.io/LocARNA
  license: GPL
  license_file: COPYING
  summary: Multiple alignment of RNAs
extra:
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:locarna
    - doi:10.1371/journal.pcbi.0030065
