# This file created by conda-build 3.21.8
# meta.yaml template originally from:
# /opt/recipe, last modified Sat Feb 26 07:45:09 2022
# ------------------------------------------------

package:
  name: jbrowse
  version: 1.16.11
source:
  sha256: e2b016299688f8814ad79ffa1daa5931a109b9eba3c702a41e77d464efb2c394
  url: https://github.com/GMOD/jbrowse/archive/1.16.11-release.zip
build:
  number: '4'
  string: pl5321he554415_4
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 1_gnu
    - binutils_impl_linux-64 2.36.1 h193b22a_2
    - binutils_linux-64 2.36 hf3e587d_6
    - gcc_impl_linux-64 10.3.0 hf2f2afa_12
    - gcc_linux-64 10.3.0 hc39de41_6
    - gxx_impl_linux-64 10.3.0 hf2f2afa_12
    - gxx_linux-64 10.3.0 h2593f52_6
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - ld_impl_linux-64 2.36.1 hea4e1c9_2
    - libgcc-devel_linux-64 10.3.0 he6cfe16_12
    - libgcc-ng 11.2.0 h1d223b6_12
    - libgomp 11.2.0 h1d223b6_12
    - libsanitizer 10.3.0 h26c7422_12
    - libstdcxx-devel_linux-64 10.3.0 he6cfe16_12
    - libstdcxx-ng 11.2.0 he4da1e4_12
    - make 4.3 hd18ef5c_1
    - sysroot_linux-64 2.12 he073ed8_15
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 1_gnu
    - bzip2 1.0.8 h7f98852_4
    - c-ares 1.18.1 h7f98852_0
    - ca-certificates 2021.10.8 ha878542_0
    - certifi 2019.11.28 py27h8c360ce_1
    - clustalw 2.1 h9f5acd7_7
    - curl 7.81.0 h2574ce0_0
    - expat 2.4.6 h27087fc_0
    - gettext 0.19.8.1 hf34092f_1004
    - git 2.35.0 pl5321hc30692c_0
    - icu 69.1 h9c3ff4c_0
    - krb5 1.19.2 hcc1bbae_3
    - ld_impl_linux-64 2.36.1 hea4e1c9_2
    - libcurl 7.81.0 h2574ce0_0
    - libdb 6.2.32 h9c3ff4c_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h516909a_1
    - libffi 3.2.1 he1b5a44_1007
    - libgcc-ng 11.2.0 h1d223b6_12
    - libgomp 11.2.0 h1d223b6_12
    - libiconv 1.16 h516909a_0
    - libnghttp2 1.47.0 h727a467_0
    - libnsl 2.0.0 h7f98852_0
    - libssh2 1.10.0 ha56f1ee_2
    - libstdcxx-ng 11.2.0 he4da1e4_12
    - libuv 1.43.0 h7f98852_0
    - libzlib 1.2.11 h36c2ea0_1013
    - ncurses 6.3 h9c3ff4c_0
    - nodejs 14.18.3 h8ca31f7_2
    - openssl 1.1.1l h7f98852_0
    - paml 4.9 hec16e2b_7
    - pcre2 10.37 h032f7d1_0
    - perl 5.32.1 2_h7f98852_perl5
    - perl-algorithm-diff 1.201 pl5321hd8ed1ab_0
    - perl-base 2.23 pl5321hdfd78af_2
    - perl-bio-asn1-entrezgene 1.73 pl5321hdfd78af_3
    - perl-bio-coordinate 1.007001 pl5321hdfd78af_3
    - perl-bio-featureio 1.6.905 pl5321hdfd78af_4
    - perl-bio-gff3 2.0 pl5321hdfd78af_5
    - perl-bio-samtools 1.43 pl5321h5bf99c6_2
    - perl-bio-tools-phylo-paml 1.7.3 pl5321hdfd78af_3
    - perl-bio-tools-run-alignment-clustalw 1.7.4 pl5321hdfd78af_3
    - perl-bio-tools-run-alignment-tcoffee 1.7.4 pl5321hdfd78af_4
    - perl-bioperl 1.7.8 hdfd78af_0
    - perl-bioperl-core 1.7.8 pl5321h9ee0642_0
    - perl-bioperl-run 1.007003 pl5321hdfd78af_0
    - perl-business-isbn 3.007 pl5321hdfd78af_0
    - perl-business-isbn-data 20210112.006 pl5321hdfd78af_0
    - perl-capture-tiny 0.48 pl5321ha770c72_1
    - perl-carp 1.50 pl5321hd8ed1ab_0
    - perl-cgi 4.54 pl5321hec16e2b_1
    - perl-class-data-inheritable 0.09 pl5321hdfd78af_0
    - perl-clone-choose 0.010 pl5321hdfd78af_1
    - perl-common-sense 3.75 pl5321hdfd78af_0
    - perl-compress-raw-zlib 2.101 pl5321h87f3376_2
    - perl-constant 1.33 pl5321hd8ed1ab_0
    - perl-cpan-meta 2.150010 pl5321hdfd78af_1
    - perl-cpan-meta-requirements 2.140 pl5321hdfd78af_1
    - perl-cpan-meta-yaml 0.018 pl5321hdfd78af_1
    - perl-data-dumper 2.183 pl5321hec16e2b_1
    - perl-db-file 1.855 pl5321h779adbc_1
    - perl-devel-size 0.83 pl5321hec16e2b_2
    - perl-devel-stacktrace 2.04 pl5321hdfd78af_1
    - perl-digest-crc32 0.01 pl5321hdfd78af_3
    - perl-digest-hmac 1.04 pl5321hdfd78af_0
    - perl-digest-md5 2.58 pl5321hec16e2b_1
    - perl-encode 3.16 pl5321h779adbc_0
    - perl-encode-locale 1.05 pl5321hdfd78af_7
    - perl-exception-class 1.45 pl5321hdfd78af_0
    - perl-exporter 5.74 pl5321hd8ed1ab_0
    - perl-exporter-tiny 1.002002 pl5321hdfd78af_0
    - perl-extutils-cbuilder 0.280230 pl5321hdfd78af_2
    - perl-extutils-makemaker 7.64 pl5321hd8ed1ab_0
    - perl-extutils-manifest 1.73 pl5321hdfd78af_0
    - perl-extutils-parsexs 3.44 pl5321hdfd78af_0
    - perl-file-copy-recursive 0.45 pl5321hec16e2b_2
    - perl-file-listing 6.14 pl5321hdfd78af_0
    - perl-file-next 1.18 pl5321hdfd78af_0
    - perl-file-path 2.18 pl5321hd8ed1ab_0
    - perl-file-readbackwards 1.06 pl5321hdfd78af_0
    - perl-file-slurp-tiny 0.004 pl5321hdfd78af_2
    - perl-file-sort 1.01 pl5321hdfd78af_3
    - perl-file-spec 3.48_01 pl5321hdfd78af_2
    - perl-file-temp 0.2304 pl5321hd8ed1ab_0
    - perl-getopt-long 2.52 pl5321hdfd78af_0
    - perl-hash-merge 0.302 pl5321hdfd78af_0
    - perl-heap-simple 0.13 pl5321hdfd78af_2
    - perl-heap-simple-perl 0.14 pl5321hdfd78af_2
    - perl-heap-simple-xs 0.10 pl5321hec16e2b_4
    - perl-html-parser 3.72 pl5321h9f5acd7_8
    - perl-html-tagset 3.20 pl5321hdfd78af_4
    - perl-http-cookies 6.10 pl5321hdfd78af_0
    - perl-http-daemon 6.13 pl5321hdfd78af_0
    - perl-http-date 6.05 pl5321hdfd78af_0
    - perl-http-message 6.36 pl5321hdfd78af_0
    - perl-http-negotiate 6.01 pl5321hdfd78af_4
    - perl-io-html 1.004 pl5321hdfd78af_0
    - perl-io-socket-ssl 2.074 pl5321hdfd78af_0
    - perl-io-string 1.08 pl5321hdfd78af_4
    - perl-io-tty 1.16 pl5321hec16e2b_1
    - perl-io-uncompress-gunzip 2.064 pl5321hdfd78af_2
    - perl-ipc-cmd 1.04 pl5321hdfd78af_0
    - perl-ipc-run 20200505.0 pl5321hdfd78af_0
    - perl-json 4.05 pl5321hdfd78af_0
    - perl-json-pp 4.07 pl5321hdfd78af_0
    - perl-json-xs 2.34 pl5321h9f5acd7_5
    - perl-libwww-perl 6.61 pl5321hdfd78af_0
    - perl-libxml-perl 0.08 pl5321hdfd78af_3
    - perl-list-moreutils 0.430 pl5321hdfd78af_0
    - perl-list-moreutils-xs 0.430 pl5321hec16e2b_1
    - perl-local-lib 2.000028 pl5321hdfd78af_0
    - perl-locale-maketext-simple 0.21 pl5321hdfd78af_3
    - perl-lwp-mediatypes 6.04 pl5321hdfd78af_1
    - perl-mime-base64 3.16 pl5321hec16e2b_2
    - perl-module-build 0.4231 pl5321hdfd78af_0
    - perl-module-corelist 5.20220220 pl5321hdfd78af_0
    - perl-module-load 0.34 pl5321hdfd78af_0
    - perl-module-load-conditional 0.68 pl5321hdfd78af_3
    - perl-module-metadata 1.000037 pl5321hdfd78af_0
    - perl-net-http 6.22 pl5321hdfd78af_0
    - perl-net-ssleay 1.92 pl5321h0e0aaa8_1
    - perl-ntlm 1.09 pl5321hdfd78af_5
    - perl-params-check 0.38 pl5321hdfd78af_2
    - perl-parent 0.238 pl5321hd8ed1ab_0
    - perl-pathtools 3.75 pl5321hec16e2b_3
    - perl-perl-ostype 1.010 pl5321hdfd78af_2
    - perl-perlio-gzip 0.20 pl5321h7132678_3
    - perl-scalar-list-utils 1.61 pl5321hec16e2b_1
    - perl-socket 2.027 pl5321hec16e2b_3
    - perl-storable 3.15 pl5321hec16e2b_3
    - perl-sub-uplevel 0.2800 pl5321hec16e2b_4
    - perl-test-deep 1.130 pl5321hdfd78af_0
    - perl-test-differences 0.69 pl5321hdfd78af_0
    - perl-test-exception 0.43 pl5321hdfd78af_3
    - perl-test-most 0.37 pl5321hdfd78af_0
    - perl-test-simple 1.302188 pl5321hdfd78af_0
    - perl-test-warn 0.36 pl5321hdfd78af_2
    - perl-text-abbrev 1.02 pl5321hdfd78af_1
    - perl-text-diff 1.45 pl5321hdfd78af_1
    - perl-text-parsewords 3.30 pl5321hdfd78af_1
    - perl-time-local 1.30 pl5321hdfd78af_0
    - perl-timedate 2.33 pl5321hdfd78af_2
    - perl-tree-dag_node 1.32 pl5321hdfd78af_0
    - perl-try-tiny 0.31 pl5321hdfd78af_0
    - perl-types-serialiser 1.01 pl5321hdfd78af_0
    - perl-uri 5.10 pl5321hdfd78af_0
    - perl-url-encode 0.03 pl5321h9ee0642_0
    - perl-version 0.9924 pl5321hec16e2b_2
    - perl-www-robotrules 6.02 pl5321hdfd78af_4
    - perl-xml-dom 1.46 pl5321hdfd78af_1
    - perl-xml-dom-xpath 0.14 pl5321hdfd78af_2
    - perl-xml-parser 2.44_01 pl5321hc3e0081_1003
    - perl-xml-regexp 0.04 pl5321hdfd78af_3
    - perl-xml-xpathengine 0.14 pl5321hdfd78af_3
    - pip 20.1.1 pyh9f0ad1d_0
    - python 2.7.15 h5a48372_1011_cpython
    - python_abi 2.7 1_cp27mu
    - readline 8.1 h46c0cb4_0
    - setuptools 44.0.0 py27_0
    - sqlite 3.37.0 h9cd32fc_0
    - t_coffee 11.0.8 py27hea885bf_8
    - tk 8.6.12 h27826a3_0
    - wheel 0.37.1 pyhd8ed1ab_0
    - zlib 1.2.11 h36c2ea0_1013
  run:
    - gff3sort
    - libgcc-ng >=10.3.0
    - libstdcxx-ng >=10.3.0
    - nodejs >=14.18.3,<15.0a0
    - perl >=5.32.1,<5.33.0a0 *_perl5
    - perl-bio-featureio
    - perl-bio-gff3
    - perl-bioperl
    - perl-capture-tiny
    - perl-db-file
    - perl-devel-size
    - perl-digest-crc32
    - perl-exporter-tiny
    - perl-file-copy-recursive
    - perl-file-next
    - perl-hash-merge
    - perl-heap-simple
    - perl-io-uncompress-gunzip
    - perl-json
    - perl-list-moreutils
    - perl-local-lib
    - perl-perlio-gzip
    - perl-scalar-list-utils
    - perl-test-deep
    - perl-test-simple
    - perl-test-warn
    - perl-uri
    - python_abi 2.7.* *_cp27mu
test:
  commands:
    - command -v add-json.pl
about:
  home: https://jbrowse.org/
  license: LGPL
  license_file: LICENSE
  summary: The JBrowse Genome Browser
extra:
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:jbrowse
    - doi:10.1101/gr.094607.109
