"technique","factor","target","principal_investigator","submission","label","category","type","Developmental-Stage","organism","key"
"ChIP-chip","BEAF-32","Non TF Chromatin binding factor <b>with some bold text for testing</b>","White, K.","21","fly/White_INSULATORS_WIG/BEAF32","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","BEAF-32;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","CP190","Non TF Chromatin binding factor","White, K.","22","fly/White_INSULATORS_WIG/CP190","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","CP190;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","GAF","Non TF Chromatin binding factor","White, K.","23","fly/White_INSULATORS_WIG/GAF","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","GAF;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","mod(mdg4)","Non TF Chromatin binding factor","White, K.","24","fly/White_INSULATORS_WIG/MDG4","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","mod(mdg4);Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","Su(Hw)","Non TF Chromatin binding factor","White, K.","27","fly/White_INSULATORS_WIG/SuHw","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","Su(Hw);Embryos 0-12 hr;ChIP-chip"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","40","fly/CEL_CLINES/1182-4H","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","total-RNA;1182-4H;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array"
"ChIP-chip","HTZ-1","Chromatin Structure","Lieb, J.","43","worm/LIEB_WIG_CHIPCHIP_HVARS","Chromatin structure","data set","Mixed Embryos","C. elegans","HTZ-1;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","Lieb, J.","44","worm/LIEB_WIG_CHIPCHIP_POL2/8WG16_N2_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","pol2;Mixed Embryos;20 degree celsius;ChIP-chip"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","48","fly/CEL_CLINES/CME-L1","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;CME-L1;Larvae 3rd instar;ventral prothoracic disc;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","49","fly/CEL_CLINES/CME-W1-CL8%2B","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","50","fly/CEL_CLINES/GM2","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","total-RNA;GM2;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","51","fly/CEL_CLINES/Kc167","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","52","fly/CEL_CLINES/ML-DmBG1-c2","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmBG1-c1;Larvae 3rd instar;CNS-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","53","fly/CEL_CLINES/ML-DmBG3-c2","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","54","fly/CEL_CLINES/ML-DmD11","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD11;Larvae 3rd instar;eye-antenna disc-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","55","fly/CEL_CLINES/ML-DmD17-c3","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD17-c3;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","56","fly/CEL_CLINES/ML-DmD20-c2","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD20-c2;Larvae 3rd instar;antenna disc-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","57","fly/CEL_CLINES/ML-DmD20-c5","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD20-c5;Larvae 3rd instar;antenna disc-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","58","fly/CEL_CLINES/ML-DmD21","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD21;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","59","fly/CEL_CLINES/ML-DmD32","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD32;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","60","fly/CEL_CLINES/ML-DmD4-c1","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD4-c1;Larvae 3rd instar;imaginal disc-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","61","fly/CEL_CLINES/ML-DmD8","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD8;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","62","fly/CEL_CLINES/ML-DmD9","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD9;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","63","fly/CEL_CLINES/S1","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","total-RNA;S1;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","64","fly/CEL_CLINES/S2-DRSC","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","total-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","65","fly/CEL_CLINES/S2R%2B","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","total-RNA;S2R+;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","66","fly/CEL_CLINES/S3","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","total-RNA;S3;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","67","fly/CEL_CLINES/Sg4","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","total-RNA;Sg4;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","69","fly/CEL_CLINES/ML-DmD16-c3","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD16-c3;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array"
"ChIP-chip","DPY-27","Non TF Chromatin binding factor","Lieb, J.","90","worm/LIEB_WIG_CHIPCHIP_DC/DPY27_N2_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","DPY-27;Mixed Embryos;20 degree celsius;ChIP-chip"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","93","fly/POST_EMBRYO_Total/Dm_larval_L1","RNA expression profiling","data set","Larvae L1 stage","D. melanogaster","total-RNA;Y cn bw sp;Larvae L1 stage;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","94","fly/POST_EMBRYO_Total/Dm_larval_L2","RNA expression profiling","data set","Larvae L2 stage","D. melanogaster","total-RNA;Y cn bw sp;Larvae L2 stage;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","95","fly/POST_EMBRYO_Total/Dm_prepupae_White","RNA expression profiling","data set","White prepupae (WPP)","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","96","fly/POST_EMBRYO_Total/Dm_adult_Female_1dayPostEclosion","RNA expression profiling","data set","Adult Female, eclosion + 1 day","D. melanogaster","total-RNA;Y cn bw sp;Adult Female, eclosion + 1 day;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","97","fly/POST_EMBRYO_Total/Dm_adult_Female_5dayPostEclosion","RNA expression profiling","data set","Adult Female, eclosion + 5 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Female, eclosion + 5 days;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","98","fly/POST_EMBRYO_Total/Dm_adult_Male_1dayPostEclosion","RNA expression profiling","data set","Adult Male, eclosion + 1 day","D. melanogaster","total-RNA;Y cn bw sp;Adult Male, eclosion + 1 day;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","99","fly/POST_EMBRYO_Total/Dm_adult_Male_5dayPostEclosion","RNA expression profiling","data set","Adult Male, eclosion + 5 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Male, eclosion + 5 days;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","100","fly/POST_EMBRYO_Total/Dm_larval_L3_gut_stage1","RNA expression profiling","data set","L3 stage, dark blue gut(1-2) stage larvae","D. melanogaster","total-RNA;Y cn bw sp;L3 stage, dark blue gut(1-2) stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","101","fly/EMBRYO_Total/embryo_0-2h","RNA expression profiling","data set","Embryos 0-2 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 0-2 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","102","fly/EMBRYO_polyA/embryo_0-2h","RNA expression profiling","data set","Embryos 0-2 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 0-2 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","103","fly/EMBRYO_Total/embryo_8-10h","RNA expression profiling","data set","Embryos 8-10 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 8-10 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","104","fly/EMBRYO_polyA/embryo_8-10h","RNA expression profiling","data set","Embryos 8-10 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 8-10 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","105","fly/EMBRYO_Total/embryo_10-12h","RNA expression profiling","data set","Embryos 10-12 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 10-12 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","106","fly/EMBRYO_polyA/embryo_10-12h","RNA expression profiling","data set","Embryos 10-12 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 10-12 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","107","fly/EMBRYO_Total/embryo_12-14h","RNA expression profiling","data set","Embryos 12-14 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 12-14 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","108","fly/EMBRYO_polyA/embryo_12-14h","RNA expression profiling","data set","Embryos 12-14 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 12-14 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","109","fly/EMBRYO_Total/embryo_14-16h","RNA expression profiling","data set","Embryos 14-16 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 14-16 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","110","fly/EMBRYO_polyA/embryo_14-16h","RNA expression profiling","data set","Embryos 14-16 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 14-16 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","111","fly/EMBRYO_Total/embryo_16-18h","RNA expression profiling","data set","Embryos 16-18 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 16-18 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","112","fly/EMBRYO_polyA/embryo_16-18h","RNA expression profiling","data set","Embryos 16-18 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 16-18 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","113","fly/EMBRYO_Total/embryo_18-20h","RNA expression profiling","data set","Embryos 18-20 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 18-20 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","114","fly/EMBRYO_polyA/embryo_18-20h","RNA expression profiling","data set","Embryos 18-20 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 18-20 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","114","fly/EMBRYO_Total","RNA expression profiling","data set","Embryos 18-20 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 18-20 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","115","fly/EMBRYO_polyA/embryo_20-22h","RNA expression profiling","data set","Embryos 20-22 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 20-22 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","116","fly/EMBRYO_Total/embryo_20-22h","RNA expression profiling","data set","Embryos 20-22 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 20-22 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","117","fly/EMBRYO_Total/embryo_22-24h","RNA expression profiling","data set","Embryos 22-24 hrSC","D. melanogaster","total-RNA;Y cn bw sp;Embryos 22-24 hrSC;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","118","fly/EMBRYO_Total/embryo_2-4h","RNA expression profiling","data set","Embryos 2-4 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 2-4 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","119","fly/EMBRYO_polyA/embryo_2-4h","RNA expression profiling","data set","Embryos 2-4 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 2-4 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","120","fly/EMBRYO_Total/embryo_4-6h","RNA expression profiling","data set","Embryos 4-6 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 4-6 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","121","fly/EMBRYO_polyA/embryo_4-6h","RNA expression profiling","data set","Embryos 4-6 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 4-6 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","122","fly/EMBRYO_polyA/embryo_6-8h","RNA expression profiling","data set","Embryos 6-8 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 6-8 hr;RNA-tiling-array"
"ChIP-chip","SDC-3","Non TF Chromatin binding factor","Lieb, J.","127","worm/LIEB_WIG_CHIPCHIP_DC/SDC3_N2_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","SDC-3;Mixed Embryos;20 degree celsius;ChIP-chip"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","139","fly/CEL_CLINES/mbn2","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","total-RNA;Mbn2;Late Embryonic stage;embryonic/larval hemocyte;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","140","fly/CEL_CLINES/CME_W2","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;CME W2;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array"
"ChIP-chip","pol2","Non TF Chromatin binding factor","Lieb, J.","174","worm/LIEB_WIG_CHIPCHIP_POL2/POLII4H8_N2_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","pol2;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Lieb, J.","175","worm/LIEB_WIG_CHIPCHIP_H3K36/AB9050_H3K36ME3_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K36me3;N2;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","Lieb, J.","176","worm/LIEB_WIG_CHIPCHIP_H3K4/H3K4ME3_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K4me3;N2;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","no-antibody-control","Non TF Chromatin binding factor","Lieb, J.","179","worm/LIEB_WIG_CHIPCHIP_CHR_IGG/JA00002_IGG_N2_L3","Other chromatin binding sites","data set","Larvae L3 stage","C. elegans","no-antibody-control;N2;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","Lieb, J.","188","worm/LIEB_WIG_CHIPCHIP_H3K9/H3K9ME3_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K9me3;N2;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","HCP-3","Chromatin Structure","Lieb, J.","194","worm/LIEB_WIG_CHIPCHIP_CSP/HCP3_N2_MXEMB","Chromatin structure","data set","Mixed Embryos","C. elegans","HCP-3;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","MES-4","Non TF Chromatin binding factor","Lieb, J.","195","worm/LIEB_WIG_CHIPCHIP_CHR_MES4/MES4_N2_EEMB","Other chromatin binding sites","data set","Early Embryos","C. elegans","MES-4;MES4FLAG;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H4acTetra","Histone Modification","Karpen, G.","201","fly/KARPEN_CHIPCHIP_HISMODS_H4_S2/H4AcTetra","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H4acTetra;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","no-antibody-control","Non TF Chromatin binding factor","Lieb, J.","202","worm/LIEB_WIG_CHIPCHIP_CHR_MES4/MES4FLAG_N2_EEMB","Other chromatin binding sites","data set","Early Embryos","C. elegans","no-antibody-control;MES4FLAG;Early Embryos;20 degree celsius;ChIP-chip"
"RT-PCR","total-RNA","mRNA","Celniker, S.","214","fly/DMG2_RTPCR_mRNA_1404_214","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;Larvae 3rd instar;ventral prothoracic disc;RT-PCR"
"RT-PCR","total-RNA","mRNA","Celniker, S.","214","fly/DMG1_RTPCR_cDNA_match_1278_214","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;Larvae 3rd instar;ventral prothoracic disc;RT-PCR"
"RT-PCR","total-RNA","mRNA","Celniker, S.","215","fly/DMG1_RTPCR_mRNA_1273_215","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;Larvae 3rd instar;ventral prothoracic disc;RT-PCR"
"RT-PCR","total-RNA","mRNA","Celniker, S.","215","fly/DMG2_RTPCR_cDNA_match_1412_215","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;Larvae 3rd instar;ventral prothoracic disc;RT-PCR"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","267","fly/CEL_CLINES/Kc167-nucl.RNA","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","268","fly/CEL_CLINES/Kc167-polyA.RNA","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array"
"ChIP-chip","BEAF-32","Non TF Chromatin binding factor","Karpen, G.","274","fly/KARPEN_CHIPCHIP_INS_S2/BEAF-HB.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","BEAF-32;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Chriz","Non TF Chromatin binding factor","Karpen, G.","275","fly/KARPEN_CHIPCHIP_CHRPROT_BG3/CHRIZ_BR.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","Chriz;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","Chriz","Non TF Chromatin binding factor","Karpen, G.","276","fly/KARPEN_CHIPCHIP_CHROMPROT_CL8/CHRIZ_BR.Clone_8","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","Chriz;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","Chriz","Non TF Chromatin binding factor","Karpen, G.","277","fly/KARPEN_CHIPCHIP_CHRPROT_KC/CHRIZ_BR.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Chriz;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Chriz","Non TF Chromatin binding factor","Karpen, G.","278","fly/KARPEN_CHIPCHIP_CHRPROT_S2/CHRIZ_BR.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Chriz;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Chriz","Non TF Chromatin binding factor","Karpen, G.","279","fly/KARPEN_CHIPCHIP_CHRPROT_S2/CHRIZ_WR.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Chriz;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","CP190","Non TF Chromatin binding factor","Karpen, G.","280","fly/KARPEN_CHIPCHIP_INS_S2/CP190_VC.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","CP190;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","CTCF","Non TF Chromatin binding factor","Karpen, G.","282","fly/KARPEN_CHIPCHIP_INS_BG3/CTCF_VC.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","CTCF;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","CTCF","Non TF Chromatin binding factor","Karpen, G.","283","fly/KARPEN_CHIPCHIP_INS_S2/CTCF_VC.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","CTCF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Ez","Non TF Chromatin binding factor","Karpen, G.","284","fly/KARPEN_CHIPCHIP_HISMODENZ_S2/Ez.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Ez;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","GAF","Non TF Chromatin binding factor","Karpen, G.","285","fly/KARPEN_CHIPCHIP_INS_S2/GAF.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","GAF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H2Bubi","Histone Modification","Karpen, G.","288","fly/KARPEN_CHIPCHIP_HVARS_BG3/H2B.ubiq_NRO3.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H2Bubi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H2Bubi","Histone Modification","Karpen, G.","289","fly/KARPEN_CHIPCHIP_HVARS_KC/H2B.ubiq_NRO3.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H2Bubi;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H2Bubi","Histone Modification","Karpen, G.","290","fly/KARPEN_CHIPCHIP_HVARS_S2/H2B.ubiq_NRO3.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H2Bubi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K18ac","Histone Modification","Karpen, G.","291","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K18Ac.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K18ac;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K18ac","Histone Modification","Karpen, G.","292","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K18Ac.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K18ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K23ac","Histone Modification","Karpen, G.","293","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K23Ac.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K23ac;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K23ac","Histone Modification","Karpen, G.","294","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K23Ac.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K23ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","Karpen, G.","295","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K27Ac.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K27ac;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","Karpen, G.","296","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K27Ac_S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K27ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K27me3","Histone Modification","Karpen, G.","297","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K27Me3_Abcam2.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K27me3;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K27me3","Histone Modification","Karpen, G.","298","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K27Me3_Abcam2.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K27me3;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K36me1","Histone Modification","Karpen, G.","299","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K36Me1.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K36me1;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Karpen, G.","301","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K36Me3.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K36me3;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Karpen, G.","302","fly/KARPEN_CHIPCHIP_HISMODS_H3_KC/H3K36Me3.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K36me3;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Karpen, G.","303","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K36Me3.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K36me3;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K4me1","Histone Modification","Karpen, G.","304","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K4Me1.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K4me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","Karpen, G.","305","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K4Me3_LP.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K4me3;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K79me2","Histone Modification","Karpen, G.","306","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K79Me2.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K79me2;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K79me2","Histone Modification","Karpen, G.","307","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K79Me2.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K79me2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","Karpen, G.","309","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K9Ac.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K9ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9me2","Histone Modification","Karpen, G.","310","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K9Me2_Ab2_new.lot.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K9me2;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9me2","Histone Modification","Karpen, G.","311","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K9Me2_Ab2.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K9me2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","Karpen, G.","312","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K9Me3_new.lot.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K9me3;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","Karpen, G.","313","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K9Me3.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K9me3;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H4K16ac","Histone Modification","Karpen, G.","316","fly/KARPEN_CHIPCHIP_HISMODS_H4_BG3/H4K16Ac_L.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H4K16ac;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H4K16ac","Histone Modification","Karpen, G.","317","fly/KARPEN_CHIPCHIP_HISMODS_H4_CL8/H4K16Ac_L.Clone_8","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H4K16ac;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","H4K16ac","Histone Modification","Karpen, G.","318","fly/KARPEN_CHIPCHIP_HISMODS_H4_KC/H4K16Ac_L.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H4K16ac;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H4K16ac","Histone Modification","Karpen, G.","319","fly/KARPEN_CHIPCHIP_HISMODS_H4_S2/H4K16Ac_L.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H4K16ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H4K16ac","Histone Modification","Karpen, G.","320","fly/KARPEN_CHIPCHIP_HISMODS_H4_S2/H4K16Ac_M.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H4K16ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H4K5ac","Histone Modification","Karpen, G.","321","fly/KARPEN_CHIPCHIP_HISMODS_H4_S2/H4K5Ac.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H4K5ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H4K8ac","Histone Modification","Karpen, G.","322","fly/KARPEN_CHIPCHIP_HISMODS_H4_S2/H4K8Ac.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H4K8ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","HP1a","Histone Modification","Karpen, G.","323","fly/KARPEN_CHIPCHIP_CHRPROT_S2/HP1a_wa191.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","HP1a;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","mod(mdg4)","Non TF Chromatin binding factor","Karpen, G.","324","fly/KARPEN_CHIPCHIP_INS_BG3/MDG4","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","mod(mdg4);ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","Pc","Non TF Chromatin binding factor","Karpen, G.","325","fly/KARPEN_CHIPCHIP_POLYCOMB_BG3/Pc.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","Pc;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","Pc","Non TF Chromatin binding factor","Karpen, G.","326","fly/KARPEN_CHIPCHIP_POLYCOMB_S2/Pc.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Pc;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","Karpen, G.","327","fly/KARPEN_CHIPCHIP_CHROMPROT_CL8/POL_II_ALG.Clone_8","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","pol2;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","Karpen, G.","328","fly/KARPEN_CHIPCHIP_CHRPROT_KC/POL_II_ALG.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","pol2;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","Karpen, G.","329","fly/KARPEN_CHIPCHIP_CHRPROT_S2/POL_II_ALG.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","pol2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Su(Hw)","Non TF Chromatin binding factor","Karpen, G.","330","fly/KARPEN_CHIPCHIP_CHRPROT_S2/Su_Hw-HB.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Su(Hw);S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Su(Hw)","Non TF Chromatin binding factor","Karpen, G.","331","fly/KARPEN_CHIPCHIP_CHRPROT_S2/Su_Hw-VC.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Su(Hw);S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","DPY-26","Non TF Chromatin binding factor","Lieb, J.","334","worm/LIEB_WIG_CHIPCHIP_DC/DPY26_N2_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","DPY-26;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","MIX-1","Non TF Chromatin binding factor","Lieb, J.","336","worm/LIEB_WIG_CHIPCHIP_DC/MIX1_N2_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","MIX-1;Mixed Embryos;20 degree celsius;ChIP-chip"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","337","fly/CEL_CLINES/ML-DmBG2-c2","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmBG2-c2;Larvae 3rd instar;CNS-derived cell-line;RNA-tiling-array"
"ChIP-chip","SDC-2","Non TF Chromatin binding factor","Lieb, J.","338","worm/LIEB_WIG_CHIPCHIP_DC/SDC2_N2_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","SDC-2;Mixed Embryos;20 degree celsius;ChIP-chip"
"RT-PCR","total-RNA","mRNA","Celniker, S.","339","fly/DMG3_RTPCR_cDNA_match_1431_339","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;Larvae 3rd instar;ventral prothoracic disc;RT-PCR"
"RT-PCR","total-RNA","mRNA","Celniker, S.","339","fly/DMG3_RTPCR_mRNA_1429_339","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;Larvae 3rd instar;ventral prothoracic disc;RT-PCR"
"RT-PCR","total-RNA","mRNA","Celniker, S.","340","fly/DMG4_RTPCR_cDNA_match_1456_340","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;Larvae 3rd instar;ventral prothoracic disc;RT-PCR"
"RT-PCR","total-RNA","mRNA","Celniker, S.","340","fly/DMG4_RTPCR_mRNA_1452_340","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;Larvae 3rd instar;ventral prothoracic disc;RT-PCR"
"RNA-seq","total-RNA","mRNA","Celniker, S.","342","fly/KC167_Total_Ap_p200_Tap_467_ExactUniq_BR1_TR1-8.sam.bam.sorted","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"ChIP-chip","H3K27me3","Histone Modification","White, K.","346","fly/White_CC_Adult_Female/AdultFemale_H3K27Me3","Histone modification and replacement","data set","Adult Female","D. melanogaster","H3K27me3;Adult Female;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","White, K.","358","fly/White_CC_L3/L3_H3K9Me3","Histone modification and replacement","data set","Larvae L3 stage","D. melanogaster","H3K9me3;Larvae L3 stage;ChIP-chip"
"ChIP-chip","H3K27me3","Histone Modification","White, K.","359","fly/White_CC_L3/L3_H3K27Me3","Histone modification and replacement","data set","Larvae L3 stage","D. melanogaster","H3K27me3;Larvae L3 stage;ChIP-chip"
"RNA-seq","total-RNA","mRNA","Celniker, S.","360","fly/KC167_Total_m200_Tap_RiboM_ExactUniq_TR1-2.sam.bam.sorted","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","362","fly/S2-DRSC_Total_m200_Tap_RiboM_ExactUniq_TR1-4.sam.bam.sorted","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","364","fly/Cl.8_Total_m200_Tap_RiboM_ExactUniq_TR1.sam.bam.sorted","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","366","fly/ML_BG3-c2_Total_m200_Tap_RiboM_ExactUniq_TR1.sam.bam.sorted","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;RNA-seq"
"ChIP-chip","H3K27me3","Histone Modification","White, K.","370","fly/White_CC_embryo_20_24h/E20_24_K27Me3","Histone modification and replacement","data set","Embryos 20-24 hr","D. melanogaster","H3K27me3;Embryos 20-24 hr;ChIP-chip"
"ChIP-chip","H3K27me3","Histone Modification","White, K.","371","fly/White_CC_L2/L2_H3K27Me3","Histone modification and replacement","data set","Larvae L2 stage","D. melanogaster","H3K27me3;Larvae L2 stage;ChIP-chip"
"ChIP-chip","H3K27me3","Histone Modification","White, K.","372","fly/White_CC_Adult_Male/AdM_H3K27Me3","Histone modification and replacement","data set","Adult Male","D. melanogaster","H3K27me3;Y cn bw sp;Adult Male;ChIP-chip"
"ChIP-chip","H3K27me3","Histone Modification","White, K.","373","fly/White_CC_L1/L1_H3K27Me3","Histone modification and replacement","data set","Larvae L1 stage","D. melanogaster","H3K27me3;Larvae L1 stage;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","White, K.","374","fly/White_CC_L1/L1_H3K9Me3","Histone modification and replacement","data set","Larvae L1 stage","D. melanogaster","H3K9me3;Larvae L1 stage;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","White, K.","375","fly/White_CC_L2/L2_H3K9Me3","Histone modification and replacement","data set","Larvae L2 stage","D. melanogaster","H3K9me3;Larvae L2 stage;ChIP-chip"
"ChIP-chip","H3K27me3","Histone Modification","White, K.","376","fly/White_CC_embryo_16_20h/E16_20_H3K27Me3","Histone modification and replacement","data set","Embryos 16-20 hr","D. melanogaster","H3K27me3;Embryos 16-20 hr;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","White, K.","377","fly/White_CC_embryo_20_24h/E20_24_H3K9Me3","Histone modification and replacement","data set","Embryos 20-24 hr","D. melanogaster","H3K9me3;Embryos 20-24 hr;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","White, K.","381","fly/White_CC_Pupae/Pupae_H3K9Ac","Histone modification and replacement","data set","Pupae","D. melanogaster","H3K9ac;Y cn bw sp;Pupae;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","White, K.","382","fly/White_CC_Pupae/Pupae_H3K4Me3","Histone modification and replacement","data set","Pupae","D. melanogaster","H3K4me3;Y cn bw sp;Pupae;ChIP-chip"
"ChIP-chip","H3K4me1","Histone Modification","White, K.","383","fly/White_CC_Pupae/Pupae_H3K4Me1","Histone modification and replacement","data set","Pupae","D. melanogaster","H3K4me1;Y cn bw sp;Pupae;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","White, K.","384","fly/White_CC_Pupae/Pupae_H3K27Ac","Histone modification and replacement","data set","Pupae","D. melanogaster","H3K27ac;Y cn bw sp;Pupae;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","White, K.","386","fly/White_CC_L3/L3_H3K9Ac","Histone modification and replacement","data set","Larvae L3 stage","D. melanogaster","H3K9ac;Y cn bw sp;Larvae L3 stage;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","White, K.","387","fly/White_CC_L3/L3_H3K4Me3","Histone modification and replacement","data set","Larvae L3 stage","D. melanogaster","H3K4me3;Y cn bw sp;Larvae L3 stage;ChIP-chip"
"ChIP-chip","H3K4me1","Histone Modification","White, K.","388","fly/White_CC_L3/L3_H3K4Me1","Histone modification and replacement","data set","Larvae L3 stage","D. melanogaster","H3K4me1;Y cn bw sp;Larvae L3 stage;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","White, K.","389","fly/White_CC_L3/L3_H3K27Ac","Histone modification and replacement","data set","Larvae L3 stage","D. melanogaster","H3K27ac;Y cn bw sp;Larvae L3 stage;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","White, K.","391","fly/White_CC_L2/L2_H3K9Ac","Histone modification and replacement","data set","Larvae L2 stage","D. melanogaster","H3K9ac;Larvae L2 stage;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","White, K.","392","fly/White_CC_L2/L2_H3K4Me3","Histone modification and replacement","data set","Larvae L2 stage","D. melanogaster","H3K4me3;Larvae L2 stage;ChIP-chip"
"ChIP-chip","H3K4me1","Histone Modification","White, K.","393","fly/White_CC_L2/L2_H3K4Me1","Histone modification and replacement","data set","Larvae L2 stage","D. melanogaster","H3K4me1;Y cn bw sp;Larvae L2 stage;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","White, K.","394","fly/White_CC_L2/L2_H3K27Ac","Histone modification and replacement","data set","Larvae L2 stage","D. melanogaster","H3K27ac;Y cn bw sp;Larvae L2 stage;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","White, K.","396","fly/White_CC_L1/L1_H3K9Ac","Histone modification and replacement","data set","Larvae L1 stage","D. melanogaster","H3K9ac;Larvae L1 stage;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","White, K.","397","fly/White_CC_L1/L1_H3K4Me3","Histone modification and replacement","data set","Larvae L1 stage","D. melanogaster","H3K4me3;Larvae L1 stage;ChIP-chip"
"ChIP-chip","H3K4me1","Histone Modification","White, K.","398","fly/White_CC_L1/L1_H3K4Me1","Histone modification and replacement","data set","Larvae L1 stage","D. melanogaster","H3K4me1;Y cn bw sp;Larvae L1 stage;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","White, K.","399","fly/White_CC_L1/L1_H3K27Ac","Histone modification and replacement","data set","Larvae L1 stage","D. melanogaster","H3K27ac;Y cn bw sp;Larvae L1 stage;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","White, K.","401","fly/White_CC_embryo_4_8h/E4_8_H3K9Ac","Histone modification and replacement","data set","Embryos 4-8 hr","D. melanogaster","H3K9ac;Y cn bw sp;Embryos 4-8 hr;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","White, K.","402","fly/White_CC_embryo_4_8h/E4_8_H3K4Me3","Histone modification and replacement","data set","Embryos 4-8 hr","D. melanogaster","H3K4me3;Embryos 4-8 hr;ChIP-chip"
"ChIP-chip","H3K4me1","Histone Modification","White, K.","403","fly/White_CC_embryo_4_8h/E4_8_H3K4Me1","Histone modification and replacement","data set","Embryos 4-8 hr","D. melanogaster","H3K4me1;Embryos 4-8 hr;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","White, K.","404","fly/White_CC_embryo_4_8h/E4_8_H3K27Ac","Histone modification and replacement","data set","Embryos 4-8 hr","D. melanogaster","H3K27ac;Embryos 4-8 hr;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","White, K.","406","fly/White_CC_embryo_20_24h/E20_24_H3K9Ac","Histone modification and replacement","data set","Embryos 20-24 hr","D. melanogaster","H3K9ac;Y cn bw sp;Embryos 20-24 hr;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","White, K.","407","fly/White_CC_embryo_20_24h/E20_24_H3K4Me3","Histone modification and replacement","data set","Embryos 20-24 hr","D. melanogaster","H3K4me3;Embryos 20-24 hr;ChIP-chip"
"ChIP-chip","H3K4me1","Histone Modification","White, K.","408","fly/White_CC_embryo_20_24h/E20_24_H3K4Me1","Histone modification and replacement","data set","Embryos 20-24 hr","D. melanogaster","H3K4me1;Embryos 20-24 hr;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","White, K.","409","fly/White_CC_embryo_20_24h/E20_24_H3K27Ac","Histone modification and replacement","data set","Embryos 20-24 hr","D. melanogaster","H3K27ac;Y cn bw sp;Embryos 20-24 hr;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","White, K.","410","fly/White_CC_embryo_16_20h/E16_20_H3K9Me3","Histone modification and replacement","data set","Embryos 16-20 hr","D. melanogaster","H3K9me3;Y cn bw sp;Embryos 16-20 hr;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","White, K.","411","fly/White_CC_embryo_16_20h/E16_20_H3K9Ac","Histone modification and replacement","data set","Embryos 16-20 hr","D. melanogaster","H3K9ac;Y cn bw sp;Embryos 16-20 hr;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","White, K.","412","fly/White_CC_embryo_16_20h/E16_20_H3K4Me3","Histone modification and replacement","data set","Embryos 16-20 hr","D. melanogaster","H3K4me3;Embryos 16-20 hr;ChIP-chip"
"ChIP-chip","H3K4me1","Histone Modification","White, K.","413","fly/White_CC_embryo_16_20h/E16_20_H3K4Me1","Histone modification and replacement","data set","Embryos 16-20 hr","D. melanogaster","H3K4me1;Embryos 16-20 hr;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","White, K.","414","fly/White_CC_embryo_16_20h/E16_20_H3K27Ac","Histone modification and replacement","data set","Embryos 16-20 hr","D. melanogaster","H3K27ac;Y cn bw sp;Embryos 16-20 hr;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","White, K.","415","fly/White_CC_embryo_12_16h/E12_16_H3K9Me3","Histone modification and replacement","data set","Embryos 12-16 hr","D. melanogaster","H3K9me3;Y cn bw sp;Embryos 12-16 hr;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","White, K.","416","fly/White_CC_embryo_12_16h/E12_16_H3K9Ac","Histone modification and replacement","data set","Embryos 12-16 hr","D. melanogaster","H3K9ac;Embryos 12-16 hr;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","White, K.","417","fly/White_CC_embryo_12_16h/E12_16_H3K4Me3","Histone modification and replacement","data set","Embryos 12-16 hr","D. melanogaster","H3K4me3;Embryos 12-16 hr;ChIP-chip"
"ChIP-chip","H3K4me1","Histone Modification","White, K.","418","fly/White_CC_embryo_12_16h/E12_16_H3K4Me1","Histone modification and replacement","data set","Embryos 12-16 hr","D. melanogaster","H3K4me1;Embryos 12-16 hr;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","White, K.","419","fly/White_CC_embryo_12_16h/E12_16_H3K27Ac","Histone modification and replacement","data set","Embryos 12-16 hr","D. melanogaster","H3K27ac;Y cn bw sp;Embryos 12-16 hr;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","White, K.","420","fly/White_CC_embryo_0_4h/E0_4_H3K9Me3","Histone modification and replacement","data set","Embryos 0-4 hr","D. melanogaster","H3K9me3;Y cn bw sp;Embryos 0-4 hr;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","White, K.","421","fly/White_CC_embryo_0_4h/E0_4_H3K9Ac","Histone modification and replacement","data set","Embryos 0-4 hr","D. melanogaster","H3K9ac;Y cn bw sp;Embryos 0-4 hr;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","White, K.","422","fly/White_CC_embryo_0_4h/E0_4_H3K4Me3","Histone modification and replacement","data set","Embryos 0-4 hr","D. melanogaster","H3K4me3;Y cn bw sp;Embryos 0-4 hr;ChIP-chip"
"ChIP-chip","H3K4me1","Histone Modification","White, K.","423","fly/White_CC_embryo_0_4h/E0_4_H3K4Me1","Histone modification and replacement","data set","Embryos 0-4 hr","D. melanogaster","H3K4me1;Embryos 0-4 hr;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","White, K.","424","fly/White_CC_embryo_0_4h/E0_4_H3K27Ac_set1","Histone modification and replacement","data set","Embryos 0-4 hr","D. melanogaster","H3K27ac;Y cn bw sp;Embryos 0-4 hr;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","White, K.","425","fly/White_CC_Adult_Male/AdultMale_H3K9Me3","Histone modification and replacement","data set","Adult Male","D. melanogaster","H3K9me3;Adult Male;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","White, K.","426","fly/White_CC_Adult_Male/AdultMale_H3K9Ac","Histone modification and replacement","data set","Adult Male","D. melanogaster","H3K9ac;Adult Male;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","White, K.","427","fly/White_CC_Adult_Male/AdM_H3K4Me3","Histone modification and replacement","data set","Adult Male","D. melanogaster","H3K4me3;Adult Male;ChIP-chip"
"ChIP-chip","H3K4me1","Histone Modification","White, K.","428","fly/White_CC_Adult_Male/AdultMale_H3K4Me1_set2","Histone modification and replacement","data set","Adult Male","D. melanogaster","H3K4me1;Adult Male;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","White, K.","429","fly/White_CC_Adult_Female/AdultFemale_H3K9Me3","Histone modification and replacement","data set","Adult Female","D. melanogaster","H3K9me3;Y cn bw sp;Adult Female;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","White, K.","430","fly/White_CC_Adult_Female/AdultFemale_H3K9Ac","Histone modification and replacement","data set","Adult Female","D. melanogaster","H3K9ac;Adult Female;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","White, K.","431","fly/White_CC_Adult_Female/AdultFemale_H3K4Me3","Histone modification and replacement","data set","Adult Female","D. melanogaster","H3K4me3;Adult Female;ChIP-chip"
"ChIP-chip","H3K4me1","Histone Modification","White, K.","432","fly/White_CC_Adult_Female/AdultFemale_H3K4Me1","Histone modification and replacement","data set","Adult Female","D. melanogaster","H3K4me1;Adult Female;ChIP-chip"
"RT-PCR","total-RNA","mRNA","Waterston, R.","445","worm/Waterston_intron_all/IntronsS4","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;CAAGTTGCATAGCGGCGTCTCT;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","445","worm/Waterston_EST_match_all/IntronsS4","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;CAAGTTGCATAGCGGCGTCTCT;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","445","worm/Waterston_intron_3553_445","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;CAAGTTGCATAGCGGCGTCTCT;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","445","worm/Waterston_match_part_3553_445","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;CAAGTTGCATAGCGGCGTCTCT;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","446","worm/Waterston_intron_all/IntronsS1","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;TTGTCGTCCGAGAATCGGG;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","446","worm/Waterston_match_part_3633_446","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;TTGTCGTCCGAGAATCGGG;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","446","worm/Waterston_EST_match_all/IntronsS1","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;TTGTCGTCCGAGAATCGGG;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","446","worm/Waterston_intron_3633_446","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;TTGTCGTCCGAGAATCGGG;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","447","worm/Waterston_EST_match_all/IntronsS2","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;CTCGGCATTCCCGTCACC;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","447","worm/Waterston_intron_all/IntronsS2","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;CTCGGCATTCCCGTCACC;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","447","worm/Waterston_match_part_3641_447","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;CTCGGCATTCCCGTCACC;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","447","worm/Waterston_intron_3641_447","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;CTCGGCATTCCCGTCACC;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","448","worm/Waterston_intron_3655_448","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;ggacactgacatggactgaaggagta;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","448","worm/Waterston_intron_all/IntronsS3","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;ggacactgacatggactgaaggagta;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","448","worm/Waterston_match_part_3655_448","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;ggacactgacatggactgaaggagta;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","448","worm/Waterston_EST_match_all/IntronsS3","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;ggacactgacatggactgaaggagta;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","455","worm/EMBRYO_FAX_WIG/EMB_panneural","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;NW1229;Mixed stage of Embryos;20 degree celsius;panneural;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","456","worm/EMBRYO_FAX_WIG/EMB_ALLREF","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;N2;Mixed stage of Embryos;20 degree celsius;reference (embryo);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","457","worm/EMBRYO_FAX_WIG/EMB_intestine","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;JR1130;Mixed stage of Embryos;20 degree celsius;intestinal cells;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","458","worm/EMBRYO_FAX_WIG/EMB_coelomocytes","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;TV1112;Mixed stage of Embryos;20 degree celsius;coelomocytes;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","459","worm/EMBRYO_FAX_WIG/EMB_AVA_neurons","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;NC1749;Mixed stage of Embryos;20 degree celsius;embryo-AVA;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","460","worm/PEMBRYO_FAX_WIG/L3_L4_PVD_OLL","RNA expression profiling","data set","L3-L4 22 hr 23dC 24 hr post-L1 stage larvae","C. elegans","total-RNA;NC1021;L3-L4 22 hr 23dC 24 hr post-L1 stage larvae;23 degree celsius;PVD OLLs (L3-L4);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","461","worm/PEMBRYO_FAX_WIG/L2_reference","RNA expression profiling","data set","Mid-L2 22 hr post-L1 stage larvae","C. elegans","total-RNA;N2;Mid-L2 22 hr post-L1 stage larvae;20 degree celsius;reference (L2);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","462","worm/PEMBRYO_FAX_WIG/L2_panneural","RNA expression profiling","data set","Mid-L2 22 hr post-L1 stage larvae","C. elegans","total-RNA;SD1241;Mid-L2 22 hr post-L1 stage larvae;20 degree celsius;Pan-neural (L2);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","463","worm/PEMBRYO_FAX_WIG/L2_intestine","RNA expression profiling","data set","Mid-L2 22 hr post-L1 stage larvae","C. elegans","total-RNA;SD1084;Mid-L2 22 hr post-L1 stage larvae;20 degree celsius;Intestine (L2);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","464","worm/PEMBRYO_FAX_WIG/L2_excretory_cell","RNA expression profiling","data set","Mid-L2 22 hr post-L1 stage larvae","C. elegans","total-RNA;NC1598;Mid-L2 22 hr post-L1 stage larvae;20 degree celsius;Excretory cell (L2);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","465","worm/PEMBRYO_FAX_WIG/L2_bw_muscle","RNA expression profiling","data set","Mid-L2 22 hr post-L1 stage larvae","C. elegans","total-RNA;SD1075;Mid-L2 22 hr post-L1 stage larvae;20 degree celsius;body wall muscle;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","466","worm/PEMBRYO_FAX_WIG/L2_GABA_motor_neurons","RNA expression profiling","data set","Mid-L2 22 hr post-L1 stage larvae","C. elegans","total-RNA;NC1627;Mid-L2 22 hr post-L1 stage larvae;20 degree celsius;GABA neurons (L2);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","467","worm/EMBRYO_FAX_WIG/EMB_dopa","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;BY200;Mixed stage of Embryos;20 degree celsius;dopaminergic neurons (embryonic);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","468","worm/EMBRYO_FAX_WIG/EMB_GABA","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;CZ1200;Mixed stage of Embryos;20 degree celsius;GABA neurons (embryonic);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","469","worm/PEMBRYO_FAX_WIG/L2_A_class_neuron","RNA expression profiling","data set","Mid-L2 22 hr post-L1 stage larvae","C. elegans","total-RNA;NC694;Mid-L2 22 hr post-L1 stage larvae;20 degree celsius;L2-A-class;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","470","worm/EMBRYO_FAX_WIG/EMB_bw_v2","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;PD4251;Mixed stage of Embryos;20 degree celsius;body wall muscle;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","472","worm/REINKE_TF_WIG/L2","RNA expression profiling","data set","Mid-L2 17.75 hrs post-L1 stage larvae","C. elegans","total-RNA;N2;Mid-L2 17.75 hrs post-L1 stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","473","worm/REINKE_TF_WIG/L4","RNA expression profiling","data set","Mid-L4 34.25 hrs post-L1 stage larvae","C. elegans","total-RNA;N2;Mid-L4 34.25 hrs post-L1 stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","474","worm/REINKE_TF_WIG/L3","RNA expression profiling","data set","Mid-L3 26.75 hrs post-L1 stage larvae","C. elegans","total-RNA;N2;Mid-L3 26.75 hrs post-L1 stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","475","worm/REINKE_TF_WIG/YA","RNA expression profiling","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","476","worm/REINKE_TF_WIG/N2EE","RNA expression profiling","data set","Early Embryos","C. elegans","total-RNA;N2;Early Embryos;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","477","worm/REINKE_TF_WIG/L2_polyA","RNA expression profiling","data set","Mid-L2 17.75 hrs post-L1 stage larvae","C. elegans","total-RNA;N2;Mid-L2 17.75 hrs post-L1 stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","478","worm/REINKE_TF_WIG/L4_male","RNA expression profiling","data set","Male  mid-L4 30 hrs post-L1 stage larvae","C. elegans","total-RNA;dpy28(y1);Male  mid-L4 30 hrs post-L1 stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","479","worm/REINKE_TF_WIG/N2LE","RNA expression profiling","data set","Late Embryos 4.5 hrs post-early embryo","C. elegans","total-RNA;N2;Late Embryos 4.5 hrs post-early embryo;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","481","worm/REINKE_TF_WIG/YA_gonad","RNA expression profiling","data set","Young Adult 42 hrs post-L1 stage larvae","C. elegans","total-RNA;N2;Young Adult 42 hrs post-L1 stage larvae;Gonad;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","484","worm/REINKE_TF_WIG/L1","RNA expression profiling","data set","Mid-L1 4.0 hrs post-L1 stage larvae","C. elegans","total-RNA;N2;Mid-L1 4.0 hrs post-L1 stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","485","worm/REINKE_TF_WIG/L4_soma","RNA expression profiling","data set","Mid-L4 34.25 hrs post-L1 stage larvae","C. elegans","total-RNA;JK1107;Mid-L4 34.25 hrs post-L1 stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","486","worm/PATHOGEN_TF_WIG/Hb_24","RNA expression profiling","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;P. luminescens (Hb);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","487","worm/PATHOGEN_TF_WIG/OG1RF_24h","RNA expression profiling","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;E. faecalis (OG1RF);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","488","worm/PATHOGEN_TF_WIG/Db_48h","RNA expression profiling","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;S. marcescens (Db11);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","489","worm/PATHOGEN_TF_WIG/Db_24h","RNA expression profiling","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;S. marcescens (Db11);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","490","worm/PATHOGEN_TF_WIG/OP50_48h","RNA expression profiling","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;E. coli (OP50);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","491","worm/PATHOGEN_TF_WIG/OP50_24h","RNA expression profiling","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;E. coli (OP50);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","513","fly/OR_EMBRYO_polyA/embryo_14-16h","RNA expression profiling","data set","Embryos 2-4 hr","D. melanogaster","total-RNA;Oregon-R;Embryos 2-4 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","514","fly/OR_EMBRYO_polyA/embryo_2-4h","RNA expression profiling","data set","Embryos 14-16 hr","D. melanogaster","total-RNA;Oregon-R;Embryos 14-16 hr;RNA-tiling-array"
"RACE","3-prime-UTR","mRNA","Piano, F.","515","worm/CEUP1_three_prime_UTR_3373_515","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","515","worm/CEUP1_UST_match_3373_515","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","515","worm/CEUP1_polyA_site_3373_515","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","515","worm/CEUP1_RST_match_3373_515","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RNA-seq","small-RNA","small RNA","Lai, E.","526","fly/Lai_RNASEQ_DUAL_T/dcr_2_ovaries","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Dcr-2L811fsX;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","526","fly/YA2_GSM280083.sam.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Dcr-2L811fsX;Adult Female;Adult ovaries;RNA-seq"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","538","fly/POST_EMBRYO_Total/Dm_larval_L3-12hr","RNA expression profiling","data set","L3 stage, 12 hr post-molt stage larvae","D. melanogaster","total-RNA;Y cn bw sp;L3 stage, 12 hr post-molt stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","539","fly/POST_EMBRYO_Total/Dm_larval_L3-clear","RNA expression profiling","data set","L3 stage, clear gut PS(7-9) stage larvae","D. melanogaster","total-RNA;Y cn bw sp;L3 stage, clear gut PS(7-9) stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","540","fly/POST_EMBRYO_Total/Dm_larval_L3-light-blue","RNA expression profiling","data set","L3 stage, dark blue gut(1-2) stage larvae","D. melanogaster","total-RNA;Y cn bw sp;L3 stage, dark blue gut(1-2) stage larvae;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","541","fly/POST_EMBRYO_Total/Dm_prepupae_White-2days","RNA expression profiling","data set","Pupae, White prepupae (WPP) + 2 days","D. melanogaster","total-RNA;Y cn bw sp;Pupae, White prepupae (WPP) + 2 days;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","542","fly/POST_EMBRYO_Total/Dm_prepupae_White-3days","RNA expression profiling","data set","Pupae, White prepupae (WPP) + 3 days","D. melanogaster","total-RNA;Y cn bw sp;Pupae, White prepupae (WPP) + 3 days;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","543","fly/POST_EMBRYO_Total/Dm_prepupae_White-4days","RNA expression profiling","data set","Pupae, White prepupae (WPP) + 4 days","D. melanogaster","total-RNA;Y cn bw sp;Pupae, White prepupae (WPP) + 4 days;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","544","fly/POST_EMBRYO_Total/Dm_prepupae_White-12hr","RNA expression profiling","data set","White prepupae (WPP) + 12 hr","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP) + 12 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","545","fly/POST_EMBRYO_Total/Dm_prepupae_White-24hr","RNA expression profiling","data set","White prepupae (WPP) + 24 hr","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP) + 24 hr;RNA-tiling-array"
"ChIP-chip","SDC-3","Non TF Chromatin binding factor","Lieb, J.","553","worm/LIEB_WIG_CHIPCHIP_DC/SDC3_N2_MXEMB_A","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","SDC-3;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","SDC-3","Non TF Chromatin binding factor","Lieb, J.","575","worm/LIEB_WIG_CHIPCHIP_DC/SDC3_N2_MXEMB_B","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","SDC-3;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","DPY-27","Non TF Chromatin binding factor","Lieb, J.","578","worm/LIEB_WIG_CHIPCHIP_DC/DPY27_N2_MXEMB_A","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","DPY-27;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","White, K.","581","fly/White_CC_Adult_Female/AdultFemale_H3K9Ac","Histone modification and replacement","data set","Adult Female","D. melanogaster","H3K9ac;Y cn bw sp;Adult Female;ChIP-chip"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","582","worm/Snyder_PHA4_GFP_COMB/PHA4_emb_GFP","TF binding sites","data set","Embryos","C. elegans","PHA-4;OP37;Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","582","worm/Snyder_PHA4_RECALL/PHA4_emb_GFP","TF binding sites","data set","Embryos","C. elegans","PHA-4;OP37;Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","584","worm/Snyder_PHA4_GFP_COMB/PHA4_StarvedL1_GFP","TF binding sites","data set","Starved L1 stage larvae","C. elegans","PHA-4;OP37;Starved L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","584","worm/Snyder_PHA4_RECALL/PHA4_StarvedL1_GFP","TF binding sites","data set","Starved L1 stage larvae","C. elegans","PHA-4;OP37;Starved L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","585","worm/Snyder_PHA4_RECALL/PHA4_FedL1_GFP","TF binding sites","data set","Fed L1 stage larvae","C. elegans","PHA-4;OP37;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","585","worm/Snyder_PHA4_GFP_COMB/PHA4_FedL1_GFP","TF binding sites","data set","Fed L1 stage larvae","C. elegans","PHA-4;OP37;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","AMA-1","Transcriptional Factor","Snyder, M.","586","worm/Snyder_PHA4_POLII_COMB/PHA4_POLII_emb","TF binding sites","data set","Embryos","C. elegans","AMA-1;OP37;Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","AMA-1","Transcriptional Factor","Snyder, M.","587","worm/Snyder_PHA4_POLII_COMB/PHA4_POLII_FedL1","TF binding sites","data set","Fed L1 stage larvae","C. elegans","AMA-1;OP37;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","AMA-1","Transcriptional Factor","Snyder, M.","588","worm/Snyder_PHA4_POLII_COMB/PHA4_POLII_StarvedL1","TF binding sites","data set","Starved L1 stage larvae","C. elegans","AMA-1;OP37;Starved L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","AMA-1","Transcriptional Factor","Snyder, M.","589","worm/Snyder_ANTIGFP_WIG_AMA1_COMB","TF binding sites","data set","L4-Young Adult stage larvae","C. elegans","AMA-1;OP34;L4-Young Adult stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","AMA-1","Transcriptional Factor","Snyder, M.","590","worm/Snyder_ANTIAMA_WIG_COMB_AMA1_POLII_L4YA","TF binding sites","data set","L4-Young Adult stage larvae","C. elegans","AMA-1;OP34;L4-Young Adult stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","DAF-16","Transcriptional Factor","Snyder, M.","591","worm/Snyder_ANTIGFP_WIG_COMB_DAF16_L4YA_GFP","TF binding sites","data set","L4-Young Adult stage larvae","C. elegans","DAF-16;TJ356;L4-Young Adult stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","AMA-1","Transcriptional Factor","Snyder, M.","592","worm/Snyder_ANTIAMA_WIG_COMB_DAF16_POLII_L4YA","TF binding sites","data set","L4-Young Adult stage larvae","C. elegans","AMA-1;TJ356;L4-Young Adult stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","MAB-5","Transcriptional Factor","Snyder, M.","593","worm/Snyder_ANTIGFP_WIG_COMB_MAB5_L3_GFP","TF binding sites","data set","Larvae L3 stage","C. elegans","MAB-5;OP26;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","AMA-1","Transcriptional Factor","Snyder, M.","594","worm/Snyder_ANTIAMA_WIG_COMB_MAB5_POLII_L3","TF binding sites","data set","Larvae L3 stage","C. elegans","AMA-1;OP26;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-chip","GROUCHO","Transcriptional Factor","White, K.","597","fly/White_CC_SG_NEURO/GROAviva","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","GROUCHO;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","Lieb, J.","599","worm/LIEB_WIG_CHIPCHIP_POL2/8WG16_N2_L4","Other chromatin binding sites","data set","Larvae L4 stage","C. elegans","pol2;Larvae L4 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","SNR1","Transcriptional Factor","White, K.","601","fly/White_CC_SG_TRITHORAX/Pupae_snr1","TF binding sites","data set","Pupae","D. melanogaster","SNR1;Y cn bw sp;Pupae;ChIP-chip"
"ChIP-chip","brahma","Transcriptional Factor","White, K.","602","fly/White_CC_SG_TRITHORAX/Pupae_brm","TF binding sites","data set","Pupae","D. melanogaster","brahma;Y cn bw sp;Pupae;ChIP-chip"
"ChIP-chip","UBX","Transcriptional Factor","White, K.","603","fly/White_CC_SG_HOMEOTIC/E3_8_UBX7701","TF binding sites","data set","Embryos 3-8 hr","D. melanogaster","UBX;Embryos 3-8 hr;ChIP-chip"
"ChIP-chip","ZFH1","Transcriptional Factor","White, K.","604","fly/White_CC_SG_LATECF","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","ZFH1;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","Invected","Transcriptional Factor","White, K.","605","fly/White_CC_SG_SEGPOL/E0_12_INV7657","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","Invected;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","DLL","Transcriptional Factor","White, K.","606","fly/White_CC_SG_TRANSFACT/E0_12_dll","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","DLL;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","cbp","Transcriptional Factor","White, K.","607","fly/White_CC_SG_TRANSFACT/E0_12_dCtBP7667","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","cbp;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","chinmo","Transcriptional Factor","White, K.","608","fly/White_CC_SG_CNS/E0_12_chinmo","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","chinmo;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","Brakeless","Transcriptional Factor","White, K.","609","fly/White_CC_SG_CNS/E0_12_bks","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","Brakeless;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","GSBN","Transcriptional Factor","White, K.","610","fly/White_CC_SG_SEGPOL/E7_24_gsbnpurif","TF binding sites","data set","Embryos 7-24 hr","D. melanogaster","GSBN;Embryos 7-24 hr;ChIP-chip"
"ChIP-chip","ENGRAILED","Transcriptional Factor","White, K.","611","fly/White_CC_SG_SEGPOL/E7_24_end300","TF binding sites","data set","Embryos 7-24 hr","D. melanogaster","ENGRAILED;Embryos 7-24 hr;ChIP-chip"
"ChIP-chip","UBX","Transcriptional Factor","White, K.","612","fly/White_CC_SG_HOMEOTIC/E3_8_UBX2","TF binding sites","data set","Embryos 3-8 hr","D. melanogaster","UBX;Embryos 3-8 hr;ChIP-chip"
"ChIP-chip","UBX","Transcriptional Factor","White, K.","613","fly/White_CC_SG_HOMEOTIC/E3_8_UBX1","TF binding sites","data set","Embryos 3-8 hr","D. melanogaster","UBX;Embryos 3-8 hr;ChIP-chip"
"ChIP-chip","UBX","Transcriptional Factor","White, K.","614","fly/White_CC_SG_HOMEOTIC/E0_12_UBX7701","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","UBX;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","TRAMTRACK","Transcriptional Factor","White, K.","615","fly/White_CC_SG_TRANSFACT/E0_12_TTK","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","TRAMTRACK;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","Stat92E","Transcriptional Factor","White, K.","616","fly/White_CC_SG_NTWCF/E0_12_Stat92E","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","Stat92E;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","RUNT","Transcriptional Factor","White, K.","617","fly/White_CC_SG_PAIRRULE","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","RUNT;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","KNOT","Transcriptional Factor","White, K.","618","fly/White_CC_SG_GAP/E0_12_KN","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","KNOT;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","inv","Transcriptional Factor","White, K.","619","fly/White_CC_SG_SEGPOL/E0_12_INVGFP","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","inv;INV-GFP;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","White, K.","620","fly/White_CC_embryo_0_12h/E0-12_H3K36Me3","Histone modification and replacement","data set","Embryos 0-12 hr","D. melanogaster","H3K36me3;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","White, K.","621","fly/White_CC_embryo_0_12h/E0_12_H3K9Me3","Histone modification and replacement","data set","Embryos 0-12 hr","D. melanogaster","H3K9me3;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","White, K.","622","fly/White_CC_embryo_0_12h/E0_12h_H3K4Me3","Histone modification and replacement","data set","Embryos 0-12 hr","D. melanogaster","H3K4me3;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","GRO","Transcriptional Factor","White, K.","623","fly/White_CC_SG_NEURO/E0_12_Gro3","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","GRO;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","FTZ-F1","Transcriptional Factor","White, K.","624","fly/White_CC_SG_NTWCF/E0_12_FTZ_F1","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","FTZ-F1;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","ENGRAILED","Transcriptional Factor","White, K.","625","fly/White_CC_SG_SEGPOL/E0_12_ENserum","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","ENGRAILED;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","Dichaete","Transcriptional Factor","White, K.","626","fly/White_CC_SG_CNS/E0_12_D","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","Dichaete;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","cnc","Transcriptional Factor","White, K.","627","fly/White_CC_SG_GAP/E0-12_CNC","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","cnc;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","BAB-1","Transcriptional Factor","White, K.","628","fly/White_CC_SG_TRANSFACT/E0_12_bab1","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","BAB-1;Embryos 0-12 hr;embryo;ChIP-chip"
"ChIP-chip","DPY-27","Non TF Chromatin binding factor","Lieb, J.","630","worm/LIEB_WIG_CHIPCHIP_DC/DPY27_N2_L4","Other chromatin binding sites","data set","Larvae L4 stage","C. elegans","DPY-27;Larvae L4 stage;20 degree celsius;ChIP-chip"
"RNA-seq","total-RNA","mRNA","Celniker, S.","633","fly/Kc167-COMBINED.sam.bam.sorted","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","634","worm/Egg_s_3.S-3.WS220.soap.sam_sorted","Gene Structure","data set","Mixed stage of Embryos","C. elegans","small-RNA;N2;Mixed stage of Embryos;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","635","worm/L1_s_5.S-3.WS220.soap.sam_sorted","Gene Structure","data set","Mid-L1 4 hrs post-L1 stage larvae","C. elegans","small-RNA;N2;Mid-L1 4 hrs post-L1 stage larvae;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","636","worm/L2_s_6.S-3.WS220.soap.sam1_header.sam_sorted","Gene Structure","data set","Mid-L2 14 hrs post-L1 stage larvae","C. elegans","small-RNA;N2;Mid-L2 14 hrs post-L1 stage larvae;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","637","worm/L3_s_7.S-3.WS220.soap.sam1_header.sam_sorted","Gene Structure","data set","Mid-L3 25 hrs post-L1 stage larvae","C. elegans","small-RNA;N2;Mid-L3 25 hrs post-L1 stage larvae;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","638","worm/L4_s_8.S-3.WS220.soap.sam1_header.sam","Gene Structure","data set","Mid-L4 36 hrs post-L1 stage larvae","C. elegans","small-RNA;N2;Mid-L4 36 hrs post-L1 stage larvae;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","639","worm/YA_Adult_s_1.S-3.WS220.soap.sam1_header.sam","Gene Structure","data set","Young adult 48 hrs post-L1 stage larvae","C. elegans","small-RNA;N2;Young adult 48 hrs post-L1 stage larvae;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","640","worm/yMale_dpyhim_s_6.S-3.WS220.soap.sam_sorted","Gene Structure","data set","Young Adult Males","C. elegans","small-RNA;dpy28(y1);Young Adult Males;RNA-seq"
"ChIP-chip","nejire","Non TF Chromatin binding factor","White, K.","643","fly/White_CC_SG_NAJIRE/E20_24_CBP","Other chromatin binding sites","data set","Embryos 20-24 hr","D. melanogaster","nejire;Embryos 20-24 hr;ChIP-chip"
"ChIP-chip","DPY-28","Non TF Chromatin binding factor","Lieb, J.","644","worm/LIEB_WIG_CHIPCHIP_DC/DPY28_N2_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","DPY-28;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","SDC-2","Non TF Chromatin binding factor","Lieb, J.","645","worm/LIEB_WIG_CHIPCHIP_DC/SDC2_N2_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","SDC-2;Mixed Embryos;20 degree celsius;ChIP-chip"
"RNA-seq","total-RNA","mRNA","Celniker, S.","650","fly/S2-DRSC-COMBINED.sam.bam.sorted","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","651","fly/ML-DmBG3-c2-COMBINED.sam.bam.sorted","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","652","fly/CME_W1_Cl.8-COMBINED.sam.bam.sorted","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","654","worm/EMBRYO_FAX_WIG/EMB_ACLASS","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;NC300;Mixed stage of Embryos;20 degree celsius;unc-4 neurons (embryonic);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","655","worm/PEMBRYO_FAX_WIG/L3_L4_dopa_neuron","RNA expression profiling","data set","L3-L4 22 hr 23dC 24 hr post-L1 stage larvae","C. elegans","total-RNA;NC1700;L3-L4 22 hr 23dC 24 hr post-L1 stage larvae;23 degree celsius;Dopaminergic neurons (L3-L4);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","656","worm/PEMBRYO_FAX_WIG/YA_reference","RNA expression profiling","data set","Young Adult 72 hr post-L1 stage larvae","C. elegans","total-RNA;N2;Young Adult 72 hr post-L1 stage larvae;20 degree celsius;reference (YA);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","657","worm/PEMBRYO_FAX_WIG/L2_coelomocytes","RNA expression profiling","data set","Mid-L2 22 hr post-L1 stage larvae","C. elegans","total-RNA;NC1668;Mid-L2 22 hr post-L1 stage larvae;20 degree celsius;Coelomocytes (L2);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","658","worm/PEMBRYO_FAX_WIG/L2_glut_rec","RNA expression profiling","data set","Mid-L2 22 hr post-L1 stage larvae","C. elegans","total-RNA;NC1842;Mid-L2 22 hr post-L1 stage larvae;20 degree celsius;Glutamate receptor expressing neurons (L2);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","659","worm/PEMBRYO_FAX_WIG/L3_L4_reference","RNA expression profiling","data set","L3-L4 22 hr 23dC 24 hr post-L1 stage larvae","C. elegans","total-RNA;N2;L3-L4 22 hr 23dC 24 hr post-L1 stage larvae;23 degree celsius;reference (L3-L4);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","660","worm/PEMBRYO_FAX_WIG/YA_CEPsh","RNA expression profiling","data set","Young Adult 72 hr post-L1 stage larvae","C. elegans","total-RNA;OS3991;Young Adult 72 hr post-L1 stage larvae;20 degree celsius;CEPsh (YA);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","661","worm/EMBRYO_FAX_WIG/EMB_GLP","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;SS747;Mixed stage of Embryos;20 degree celsius;germ line precursor (embryonic);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","662","worm/EMBRYO_FAX_WIG/EMB_hypodermal","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;DM8001;Mixed stage of Embryos;20 degree celsius;hypodermis;RNA-tiling-array"
"ChIP-chip","pol2","Non TF Chromatin binding factor","Lieb, J.","663","worm/LIEB_WIG_CHIPCHIP_POL2/8WG16_N2_EEMB","Other chromatin binding sites","data set","Early Embryos","C. elegans","pol2;Early Embryos;20 degree celsius;ChIP-chip"
"DNA-tiling-array","Replication-Timing","DNA Replication","MacAlpine, D.","668","fly/MacAlpine_M_WIG_RT_465_466_468/Kc167","Replication","data set","Late Embryonic stage","D. melanogaster","Replication-Timing;Kc167;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","Replication-Timing","DNA Replication","MacAlpine, D.","669","fly/MacAlpine_M_WIG_RT_465_466_468/S2","Replication","data set","Late Embryonic stage","D. melanogaster","Replication-Timing;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","Replication-Timing","DNA Replication","MacAlpine, D.","670","fly/MacAlpine_M_WIG_RT_465_466_468/Bg3","Replication","data set","Larvae 3rd instar","D. melanogaster","Replication-Timing;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;DNA-tiling-array"
"ChIP-chip","ORC2","DNA Replication","MacAlpine, D.","674","fly/MacAlpine_PRERC_WIG_1049/ORC2","Replication","data set","Late Embryonic stage","D. melanogaster","ORC2;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","MCM2-7","DNA Replication","MacAlpine, D.","675","fly/MacAlpine_PRERC_WIG_1049/MCM_cycE","Replication","data set","Late Embryonic stage","D. melanogaster","MCM2-7;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","Lieb, J.","691","worm/LIEB_WIG_CHIPCHIP_H3K9/H3K9ME3_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K9me3;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","DPY-27","Non TF Chromatin binding factor","Lieb, J.","693","worm/LIEB_WIG_CHIPCHIP_DC/DPY271dh_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","DPY-27;11dh;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","DPY-27","Non TF Chromatin binding factor","Lieb, J.","695","worm/LIEB_WIG_CHIPCHIP_DC/DPY27_YPT41_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","DPY-27;YPT41;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","DPY-27","Non TF Chromatin binding factor","Lieb, J.","696","worm/LIEB_WIG_CHIPCHIP_DC/DPY27_YPT47_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","DPY-27;YPT47;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","SDC-3","Non TF Chromatin binding factor","Lieb, J.","701","worm/LIEB_WIG_CHIPCHIP_DC/SDC3_YPT47_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","SDC-3;YPT47;Mixed Embryos;20 degree celsius;ChIP-chip"
"DNA-tiling-array","Replication-Origin","DNA Replication","MacAlpine, D.","709","fly/MacAlpine_K_WIG_934_939_941/Kc","Replication","data set","Late Embryonic stage","D. melanogaster","Replication-Origin;Kc167;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","Replication-Origin","DNA Replication","MacAlpine, D.","710","fly/MacAlpine_K_WIG_934_939_941/S2","Replication","data set","Late Embryonic stage","D. melanogaster","Replication-Origin;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","Replication-Origin","DNA Replication","MacAlpine, D.","711","fly/MacAlpine_K_WIG_934_939_941/Bg3","Replication","data set","Larvae 3rd instar","D. melanogaster","Replication-Origin;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;DNA-tiling-array"
"RNA-seq","total-RNA","mRNA","Celniker, S.","712","fly/whole_fly.sam.bam.sorted","Gene Structure","data set","Mixed Adult 7-11 day","D. melanogaster","total-RNA;Y cn bw sp;Mixed Adult 7-11 day;RNA-seq"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","713","fly/CEL_CLINES/ML_DmBG3_c2_polyA","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","715","fly/CEL_CLINES/S2_DRSC_nucl","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","total-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","716","fly/CEL_CLINES/ML_DmBG3_c2_nucl","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","717","fly/CEL_CLINES/C1_8_polyA","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","718","fly/CEL_CLINES/S2_DRSC_polyA","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","total-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array"
"CGH","Replication-Copy-Number","Copy Number Variation","MacAlpine, D.","725","fly/MacAlpine_CGH_WIG_596","Copy Number Variation","data set","Embryos 0-4 hr","D. melanogaster","Replication-Copy-Number;S2-DRSC;w1118;Embryos 0-4 hr;embryo-derived cell-line;CGH"
"ChIP-seq","CEH-14","Transcriptional Factor","Snyder, M.","734","worm/Snyder_ANTIGFP_WIG_CEH14_COMB","TF binding sites","data set","Larvae L2 stage","C. elegans","CEH-14;OP73;Larvae L2 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","CEH-14","Transcriptional Factor","Snyder, M.","734","worm/SNYDER_ANTIGFP_WIG_CEH14_RECALL","TF binding sites","data set","Larvae L2 stage","C. elegans","CEH-14;OP73;Larvae L2 stage;20 degree celsius;ChIP-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","737","fly/Lai_RNASEQ_DUAL_T/Female_heads","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Canton S;Adult Female;Female heads;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","737","fly/YAF_GSM240749.gff.sam.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Canton S;Adult Female;Female heads;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","738","fly/KC_GSM272653.gff.sam.bam.sorted","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;Kc-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","738","fly/Lai_RNASEQ_DUAL_CELLS/Kc167_cells","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;Kc-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","739","fly/Lai_RNASEQ_DUAL_T/Male_body","RNA expression profiling","data set","Adult Male","D. melanogaster","small-RNA;Canton S;Adult Male;Male body;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","739","fly/YAM_GSM286602.gff.sam.bam.sorted","RNA expression profiling","data set","Adult Male","D. melanogaster","small-RNA;Canton S;Adult Male;Male body;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","740","fly/Lai_RNASEQ_DUAL_E/2-6hr_embryo_1stRep","RNA expression profiling","data set","Embryos 2-6 hr","D. melanogaster","small-RNA;Canton S;Embryos 2-6 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","740","fly/E02_GSM286605.gff.sam.bam.sorted","RNA expression profiling","data set","Embryos 2-6 hr","D. melanogaster","small-RNA;Canton S;Embryos 2-6 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","741","fly/S2_GSM272651.gff.sam.bam.sorted","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","741","fly/Lai_RNASEQ_DUAL_CELLS/S2_Kc167_Ecdysone","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","742","fly/ID_GSM275691.gff.sam.bam.sorted","RNA expression profiling","data set","Adult Male","D. melanogaster","small-RNA;Canton S;Adult Male;Imaginal disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","742","fly/Lai_RNASEQ_DUAL_T/Imaginal_disc","RNA expression profiling","data set","Adult Male","D. melanogaster","small-RNA;Canton S;Adult Male;Imaginal disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","743","fly/Lai_RNASEQ_DUAL_T/Female_Body","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Canton S;Adult Female;Female body;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","743","fly/YAF_GSM286603.gff.sam.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Canton S;Adult Female;Female body;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","745","fly/E00_GSM286613.gff.sam.bam.sorted","RNA expression profiling","data set","Embryos 0-1 hr","D. melanogaster","small-RNA;Canton S;Embryos 0-1 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","745","fly/Lai_RNASEQ_DUAL_E/0-1h_embryo_2ndRep","RNA expression profiling","data set","Embryos 0-1 hr","D. melanogaster","small-RNA;Canton S;Embryos 0-1 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","746","fly/Lai_RNASEQ_DUAL_CELLS/S2_DRSC2_cells","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","746","fly/S2_GSM272652.gff.sam.bam.sorted","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","747","fly/YAM_GSM286601.gff.sam.bam.sorted","RNA expression profiling","data set","Adult Male","D. melanogaster","small-RNA;Canton S;Adult Male;Male heads;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","747","fly/Lai_RNASEQ_DUAL_T/Male_heads","RNA expression profiling","data set","Adult Male","D. melanogaster","small-RNA;Canton S;Adult Male;Male heads;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","748","fly/Lai_RNASEQ_DUAL_PE/L3_1stRep","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;Canton S;Larvae 3rd instar;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","748","fly/L3_GSM322208.gff.sam.bam.sorted","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;Canton S;Larvae 3rd instar;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","749","fly/L3_GSM322245.gff.sam.bam.sorted","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;Canton S;Larvae 3rd instar;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","749","fly/Lai_RNASEQ_DUAL_PE/L3_2ndRep","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;Canton S;Larvae 3rd instar;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","750","fly/YAF_GSM322533.gff.sam.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Canton S;Adult Female;Female heads;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","750","fly/Lai_RNASEQ_DUAL_T/Female_head_1stRep","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Canton S;Adult Female;Female heads;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","751","fly/Lai_RNASEQ_DUAL_T/Male_head_1stRep","RNA expression profiling","data set","Adult Male","D. melanogaster","small-RNA;Canton S;Adult Male;Male heads;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","751","fly/YAM_GSM322543.gff.sam.bam.sorted","RNA expression profiling","data set","Adult Male","D. melanogaster","small-RNA;Canton S;Adult Male;Male heads;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","752","fly/E02_GSM286606.gff.sam.bam.sorted","RNA expression profiling","data set","Embryos 2-6 hr","D. melanogaster","small-RNA;Canton S;Embryos 2-6 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","752","fly/Lai_RNASEQ_DUAL_E/2-6h_embryo_2ndRep","RNA expression profiling","data set","Embryos 2-6 hr","D. melanogaster","small-RNA;Canton S;Embryos 2-6 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","753","fly/Lai_RNASEQ_DUAL_E/6-10h_embryo_2ndRep","RNA expression profiling","data set","Embryos 6-10 hr","D. melanogaster","small-RNA;Canton S;Embryos 6-10 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","753","fly/E06_GSM286611.gff.sam.bam.sorted","RNA expression profiling","data set","Embryos 6-10 hr","D. melanogaster","small-RNA;Canton S;Embryos 6-10 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","754","fly/Lai_RNASEQ_DUAL_E/6-10h_embryo_1stRep","RNA expression profiling","data set","Embryos 6-10 hr","D. melanogaster","small-RNA;Canton S;Embryos 6-10 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","754","fly/E06_GSM286607.gff.sam.bam.sorted","RNA expression profiling","data set","Embryos 6-10 hr","D. melanogaster","small-RNA;Canton S;Embryos 6-10 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","755","fly/Lai_RNASEQ_DUAL_E/0-1h_embryo_1stRep","RNA expression profiling","data set","Embryos 0-1 hr","D. melanogaster","small-RNA;Canton S;Embryos 0-1 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","755","fly/E00_GSM286604.gff.sam.bam.sorted","RNA expression profiling","data set","Embryos 0-1 hr","D. melanogaster","small-RNA;Canton S;Embryos 0-1 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","757","fly/P02_GSM322219.gff.sam.bam.sorted","RNA expression profiling","data set","Pupae 2-4 day","D. melanogaster","small-RNA;Canton S;Pupae 2-4 day;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","757","fly/Lai_RNASEQ_DUAL_PE/2-4day_pupae_1stRep","RNA expression profiling","data set","Pupae 2-4 day","D. melanogaster","small-RNA;Canton S;Pupae 2-4 day;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","758","fly/Lai_RNASEQ_DUAL_PE/2-4day_pupae_2ndRep","RNA expression profiling","data set","Pupae 2-4 day","D. melanogaster","small-RNA;Canton S;Pupae 2-4 day;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","758","fly/P02_GSM322338.gff.sam.bam.sorted","RNA expression profiling","data set","Pupae 2-4 day","D. melanogaster","small-RNA;Canton S;Pupae 2-4 day;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","762","fly/L1_GSM360256.gff.sam.bam.sorted","RNA expression profiling","data set","Larvae 1st instar","D. melanogaster","small-RNA;Canton S;Larvae 1st instar;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","762","fly/Lai_RNASEQ_DUAL_PE/L1_1stRep","RNA expression profiling","data set","Larvae 1st instar","D. melanogaster","small-RNA;Canton S;Larvae 1st instar;RNA-seq"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","763","fly/EMBRYO_Total/embryo_6-8h","RNA expression profiling","data set","Embryos 6-8 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 6-8 hr;RNA-tiling-array"
"ChIP-chip","H3K9me3","Histone Modification","White, K.","764","fly/White_CC_embryo_4_8h/E4_8_H3K9Me3","Histone modification and replacement","data set","Embryos 4-8 hr","D. melanogaster","H3K9me3;Embryos 4-8 hr;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","White, K.","765","fly/White_CC_Pupae/Pupae_H3K9Me3","Histone modification and replacement","data set","Pupae","D. melanogaster","H3K9me3;Pupae;ChIP-chip"
"ChIP-chip","H3K27me3","Histone Modification","White, K.","767","fly/White_CC_embryo_12_16h/E12_16_H3K27Me3","Histone modification and replacement","data set","Embryos 12-16 hr","D. melanogaster","H3K27me3;Embryos 12-16 hr;ChIP-chip"
"ChIP-chip","H3K27me3","Histone Modification","White, K.","768","fly/White_CC_embryo_4_8h/E4_8_H3K27Me3","Histone modification and replacement","data set","Embryos 4-8 hr","D. melanogaster","H3K27me3;Embryos 4-8 hr;ChIP-chip"
"ChIP-chip","CTCF","Non TF Chromatin binding factor","White, K.","769","fly/White_INSULATORS_WIG/E0_12_CTCF_C","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","CTCF;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","CTCF","Non TF Chromatin binding factor","White, K.","770","fly/White_INSULATORS_WIG/E0_12_CTCF_N","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","CTCF;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","White, K.","771","fly/White_CC_embryo_0_4h/E0_4_H3K4Me3_new","Histone modification and replacement","data set","Embryos 0-4 hr","D. melanogaster","H3K4me3;Embryos 0-4 hr;ChIP-chip"
"RNA-seq","small-RNA","small RNA","Lai, E.","772","fly/Lai_RNASEQ_DUAL_T/adult_testes","RNA expression profiling","data set","Adult Male","D. melanogaster","small-RNA;Oregon-R;Adult Male;Adult testes;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","772","fly/YA02_GSM280085.sam.bam.sorted","RNA expression profiling","data set","Adult Male","D. melanogaster","small-RNA;Oregon-R;Adult Male;Adult testes;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","773","fly/Lai_RNASEQ_DUAL_T/adult_ovaries","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Y cn bw sp;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","773","fly/YA02_GSM280082.sam.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Y cn bw sp;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","774","fly/Lai_RNASEQ_DUAL_T/loqs_ovaries","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Loqs f00791;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","774","fly/YA_GSM280084.sam.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Loqs f00791;Adult Female;Adult ovaries;RNA-seq"
"ChIP-seq","H3K4me1","Histone Modification","White, K.","777","fly/White_CS_embryo_0_4h/E0_4_H3K4me1","Histone modification and replacement","data set","Embryos 0-4 hr","D. melanogaster","H3K4me1;Y cn bw sp;Embryos 0-4 hr;ChIP-seq"
"ChIP-seq","H3K4me1","Histone Modification","White, K.","778","fly/White_CS_embryo_4_8h/E4_8_H3K4Me1","Histone modification and replacement","data set","Embryos 4-8 hr","D. melanogaster","H3K4me1;Y cn bw sp;Embryos 4-8 hr;ChIP-seq"
"ChIP-seq","H3K4me1","Histone Modification","White, K.","779","fly/White_CS_embryo_8_12h/E8_12_H3K4Me1","Histone modification and replacement","data set","Embryos 8-12 hr","D. melanogaster","H3K4me1;Y cn bw sp;Embryos 8-12 hr;ChIP-seq"
"ChIP-seq","H3K4me1","Histone Modification","White, K.","780","fly/White_CS_embryo_12_16h/E12_16_H3K4Me1","Histone modification and replacement","data set","Embryos 12-16 hr","D. melanogaster","H3K4me1;Y cn bw sp;Embryos 12-16 hr;ChIP-seq"
"ChIP-seq","H3K4me1","Histone Modification","White, K.","781","fly/White_CS_embryo_16_20h/E16_20_H3K4Me1","Histone modification and replacement","data set","Embryos 16-20 hr","D. melanogaster","H3K4me1;Y cn bw sp;Embryos 16-20 hr;ChIP-seq"
"ChIP-seq","H3K4me1","Histone Modification","White, K.","782","fly/White_CS_embryo_20_24h/E20_24_H3K4Me1","Histone modification and replacement","data set","Embryos 20-24 hr","D. melanogaster","H3K4me1;Y cn bw sp;Embryos 20-24 hr;ChIP-seq"
"ChIP-seq","H3K4me1","Histone Modification","White, K.","783","fly/White_CS_L1/L1_H3K4Me1","Histone modification and replacement","data set","Larvae L1 stage","D. melanogaster","H3K4me1;Y cn bw sp;Larvae L1 stage;ChIP-seq"
"ChIP-seq","H3K4me1","Histone Modification","White, K.","784","fly/White_CS_L2/L2_H3K4Me1","Histone modification and replacement","data set","Larvae L2 stage","D. melanogaster","H3K4me1;Y cn bw sp;Larvae L2 stage;ChIP-seq"
"ChIP-seq","H3K4me1","Histone Modification","White, K.","785","fly/White_CS_L3/L3_H3K4Me1","Histone modification and replacement","data set","Larvae L3 stage","D. melanogaster","H3K4me1;Y cn bw sp;Larvae L3 stage;ChIP-seq"
"ChIP-seq","H3K4me1","Histone Modification","White, K.","786","fly/White_CS_Pupae/Pupae_H3K4Me1","Histone modification and replacement","data set","Pupae","D. melanogaster","H3K4me1;Y cn bw sp;Pupae;ChIP-seq"
"ChIP-seq","H3K4me1","Histone Modification","White, K.","787","fly/White_CS_Adult_Female/AdultFemale_H3K4Me1","Histone modification and replacement","data set","Adult Female","D. melanogaster","H3K4me1;Y cn bw sp;Adult Female;ChIP-seq"
"ChIP-seq","H3K4me1","Histone Modification","White, K.","788","fly/White_CS_Adult_Male/AdultMale_H3K4Me1","Histone modification and replacement","data set","Adult Male","D. melanogaster","H3K4me1;Y cn bw sp;Adult Male;ChIP-seq"
"ChIP-seq","H3K4me3","Histone Modification","White, K.","789","fly/White_CS_embryo_0_4h/E0_4_H3K4Me3","Histone modification and replacement","data set","Embryos 0-4 hr","D. melanogaster","H3K4me3;Y cn bw sp;Embryos 0-4 hr;ChIP-seq"
"ChIP-seq","H3K4me3","Histone Modification","White, K.","790","fly/White_CS_embryo_4_8h/E4_8_H3K4Me3","Histone modification and replacement","data set","Embryos 4-8 hr","D. melanogaster","H3K4me3;Y cn bw sp;Embryos 4-8 hr;ChIP-seq"
"ChIP-seq","H3K4me3","Histone Modification","White, K.","791","fly/White_CS_embryo_8_12h/E8_12_H3K4Me3","Histone modification and replacement","data set","Embryos 8-12 hr","D. melanogaster","H3K4me3;Y cn bw sp;Embryos 8-12 hr;ChIP-seq"
"ChIP-seq","H3K4me3","Histone Modification","White, K.","792","fly/White_CS_embryo_12_16h/E12_16_H3K4Me3","Histone modification and replacement","data set","Embryos 12-16 hr","D. melanogaster","H3K4me3;Y cn bw sp;Embryos 12-16 hr;ChIP-seq"
"ChIP-seq","H3K4me3","Histone Modification","White, K.","793","fly/White_CS_embryo_16_20h/E16_20_H3K4Me3","Histone modification and replacement","data set","Embryos 16-20 hr","D. melanogaster","H3K4me3;Y cn bw sp;Embryos 16-20 hr;ChIP-seq"
"ChIP-seq","H3K4me3","Histone Modification","White, K.","794","fly/White_CS_embryo_20_24h/E20_24_H3K4Me3","Histone modification and replacement","data set","Embryos 20-24 hr","D. melanogaster","H3K4me3;Y cn bw sp;Embryos 20-24 hr;ChIP-seq"
"ChIP-seq","H3K4me3","Histone Modification","White, K.","795","fly/White_CS_L1/L1_H3K4Me3","Histone modification and replacement","data set","Larvae L1 stage","D. melanogaster","H3K4me3;Y cn bw sp;Larvae L1 stage;ChIP-seq"
"ChIP-seq","H3K4me3","Histone Modification","White, K.","796","fly/White_CS_L2/L2_H3K4Me3","Histone modification and replacement","data set","Larvae L2 stage","D. melanogaster","H3K4me3;Y cn bw sp;Larvae L2 stage;ChIP-seq"
"ChIP-seq","H3K4me3","Histone Modification","White, K.","797","fly/White_CS_L3/L3_H3K4Me3","Histone modification and replacement","data set","Larvae L3 stage","D. melanogaster","H3K4me3;Y cn bw sp;Larvae L3 stage;ChIP-seq"
"ChIP-seq","H3K4me3","Histone Modification","White, K.","798","fly/White_CS_Pupae/Pupae_H3K4Me3","Histone modification and replacement","data set","Pupae","D. melanogaster","H3K4me3;Y cn bw sp;Pupae;ChIP-seq"
"ChIP-seq","H3K4me3","Histone Modification","White, K.","799","fly/White_CS_Adult_Female/AdultFemale_H3K4Me3","Histone modification and replacement","data set","Adult Female","D. melanogaster","H3K4me3;Y cn bw sp;Adult Female;ChIP-seq"
"ChIP-seq","H3K4me3","Histone Modification","White, K.","800","fly/White_CS_Adult_Male/AdultMale_H3K4Me3","Histone modification and replacement","data set","Adult Male","D. melanogaster","H3K4me3;Y cn bw sp;Adult Male;ChIP-seq"
"ChIP-seq","H3K9me3","Histone Modification","White, K.","801","fly/White_CS_embryo_0_4h/E0_4_H3K9Me3","Histone modification and replacement","data set","Embryos 0-4 hr","D. melanogaster","H3K9me3;Y cn bw sp;Embryos 0-4 hr;ChIP-seq"
"ChIP-seq","H3K9me3","Histone Modification","White, K.","802","fly/White_CS_embryo_4_8h/E4_8_H3K9Me3","Histone modification and replacement","data set","Embryos 4-8 hr","D. melanogaster","H3K9me3;Y cn bw sp;Embryos 4-8 hr;ChIP-seq"
"ChIP-seq","H3K9me3","Histone Modification","White, K.","803","fly/White_CS_embryo_8_12h/E8_12_H3K9Me3","Histone modification and replacement","data set","Embryos 8-12 hr","D. melanogaster","H3K9me3;Y cn bw sp;Embryos 8-12 hr;ChIP-seq"
"ChIP-seq","H3K9me3","Histone Modification","White, K.","804","fly/White_CS_embryo_12_16h/E12_16_H3K9Me3","Histone modification and replacement","data set","Embryos 12-16 hr","D. melanogaster","H3K9me3;Y cn bw sp;Embryos 12-16 hr;ChIP-seq"
"ChIP-seq","H3K9me3","Histone Modification","White, K.","805","fly/White_CS_embryo_16_20h/E16_20_H3K9Me3","Histone modification and replacement","data set","Embryos 16-20 hr","D. melanogaster","H3K9me3;Y cn bw sp;Embryos 16-20 hr;ChIP-seq"
"ChIP-seq","H3K9me3","Histone Modification","White, K.","806","fly/White_CS_embryo_20_24h/E20_24_H3K9Me3","Histone modification and replacement","data set","Embryos 20-24 hr","D. melanogaster","H3K9me3;Y cn bw sp;Embryos 20-24 hr;ChIP-seq"
"ChIP-seq","H3K9me3","Histone Modification","White, K.","807","fly/White_CS_L1/L1_H3K9Me3","Histone modification and replacement","data set","Larvae L1 stage","D. melanogaster","H3K9me3;Y cn bw sp;Larvae L1 stage;ChIP-seq"
"ChIP-seq","H3K9me3","Histone Modification","White, K.","808","fly/White_CS_L2/L2_H3K9Me3","Histone modification and replacement","data set","Larvae L2 stage","D. melanogaster","H3K9me3;Y cn bw sp;Larvae L2 stage;ChIP-seq"
"ChIP-seq","H3K9me3","Histone Modification","White, K.","809","fly/White_CS_Pupae/Pupae_H3K9Me3","Histone modification and replacement","data set","Pupae","D. melanogaster","H3K9me3;Y cn bw sp;Pupae;ChIP-seq"
"ChIP-seq","H3K27me3","Histone Modification","White, K.","810","fly/White_CS_embryo_0_4h/E0_4_H3K27Me3","Histone modification and replacement","data set","Embryos 0-4 hr","D. melanogaster","H3K27me3;Y cn bw sp;Embryos 0-4 hr;ChIP-seq"
"ChIP-seq","H3K27me3","Histone Modification","White, K.","811","fly/White_CS_embryo_4_8h/E4_8_H3K27Me3","Histone modification and replacement","data set","Embryos 4-8 hr","D. melanogaster","H3K27me3;Y cn bw sp;Embryos 4-8 hr;ChIP-seq"
"ChIP-seq","H3K27me3","Histone Modification","White, K.","812","fly/White_CS_embryo_8_12h/E8_12_H3K27Me3","Histone modification and replacement","data set","Embryos 8-12 hr","D. melanogaster","H3K27me3;Y cn bw sp;Embryos 8-12 hr;ChIP-seq"
"ChIP-seq","H3K27me3","Histone Modification","White, K.","813","fly/White_CS_embryo_12_16h/E12_16_H3K27Me3","Histone modification and replacement","data set","Embryos 12-16 hr","D. melanogaster","H3K27me3;Y cn bw sp;Embryos 12-16 hr;ChIP-seq"
"ChIP-seq","H3K27me3","Histone Modification","White, K.","814","fly/White_CS_embryo_16_20h/E16_20_H3K27Me3","Histone modification and replacement","data set","Embryos 16-20 hr","D. melanogaster","H3K27me3;Y cn bw sp;Embryos 16-20 hr;ChIP-seq"
"ChIP-seq","H3K27me3","Histone Modification","White, K.","815","fly/White_CS_embryo_20_24h/E20_24_H3K27Me3","Histone modification and replacement","data set","Embryos 20-24 hr","D. melanogaster","H3K27me3;Y cn bw sp;Embryos 20-24 hr;ChIP-seq"
"ChIP-seq","H3K27me3","Histone Modification","White, K.","816","fly/White_CS_L1/L1_H3K27Me3","Histone modification and replacement","data set","Larvae L1 stage","D. melanogaster","H3K27me3;Y cn bw sp;Larvae L1 stage;ChIP-seq"
"ChIP-seq","H3K27me3","Histone Modification","White, K.","817","fly/White_CS_L2/L2_H3K27Me3","Histone modification and replacement","data set","Larvae L2 stage","D. melanogaster","H3K27me3;Y cn bw sp;Larvae L2 stage;ChIP-seq"
"ChIP-seq","H3K27me3","Histone Modification","White, K.","818","fly/White_CS_L3/L3_H3K27Me3","Histone modification and replacement","data set","Larvae L3 stage","D. melanogaster","H3K27me3;Y cn bw sp;Larvae L3 stage;ChIP-seq"
"ChIP-seq","H3K27me3","Histone Modification","White, K.","819","fly/White_CS_Pupae/Pupae_H3K27Me3","Histone modification and replacement","data set","Pupae","D. melanogaster","H3K27me3;Y cn bw sp;Pupae;ChIP-seq"
"ChIP-seq","H3K27me3","Histone Modification","White, K.","820","fly/White_CS_Adult_Male/AdultMale_H3K27Me3","Histone modification and replacement","data set","Adult Male","D. melanogaster","H3K27me3;Y cn bw sp;Adult Male;ChIP-seq"
"ChIP-seq","H3K9ac","Histone Modification","White, K.","821","fly/White_CS_embryo_0_4h/E0_4_H3K9Ac","Histone modification and replacement","data set","Embryos 0-4 hr","D. melanogaster","H3K9ac;Y cn bw sp;Embryos 0-4 hr;ChIP-seq"
"ChIP-seq","H3K9ac","Histone Modification","White, K.","822","fly/White_CS_embryo_4_8h/E4_8_H3K9Ac","Histone modification and replacement","data set","Embryos 4-8 hr","D. melanogaster","H3K9ac;Y cn bw sp;Embryos 4-8 hr;ChIP-seq"
"ChIP-seq","H3K9ac","Histone Modification","White, K.","823","fly/White_CS_embryo_8_12h/E8_12_H3K9Ac","Histone modification and replacement","data set","Embryos 8-12 hr","D. melanogaster","H3K9ac;Y cn bw sp;Embryos 8-12 hr;ChIP-seq"
"ChIP-seq","H3K9ac","Histone Modification","White, K.","824","fly/White_CS_embryo_12_16h/E12_16_H3K9Ac","Histone modification and replacement","data set","Embryos 12-16 hr","D. melanogaster","H3K9ac;Y cn bw sp;Embryos 12-16 hr;ChIP-seq"
"ChIP-seq","H3K9ac","Histone Modification","White, K.","825","fly/White_CS_embryo_16_20h/E16_20_H3K9Ac","Histone modification and replacement","data set","Embryos 16-20 hr","D. melanogaster","H3K9ac;Y cn bw sp;Embryos 16-20 hr;ChIP-seq"
"ChIP-seq","H3K9ac","Histone Modification","White, K.","826","fly/White_CS_embryo_20_24h/E20_24_H3K9Ac","Histone modification and replacement","data set","Embryos 20-24 hr","D. melanogaster","H3K9ac;Y cn bw sp;Embryos 20-24 hr;ChIP-seq"
"ChIP-seq","H3K9ac","Histone Modification","White, K.","827","fly/White_CS_L1/L1_H3K9Ac","Histone modification and replacement","data set","Larvae L1 stage","D. melanogaster","H3K9ac;Y cn bw sp;Larvae L1 stage;ChIP-seq"
"ChIP-seq","H3K9ac","Histone Modification","White, K.","828","fly/White_CS_L2/L2_H3K9Ac","Histone modification and replacement","data set","Larvae L2 stage","D. melanogaster","H3K9ac;Y cn bw sp;Larvae L2 stage;ChIP-seq"
"ChIP-seq","H3K9ac","Histone Modification","White, K.","829","fly/White_CS_L3/L3_H3K9Ac","Histone modification and replacement","data set","Larvae L3 stage","D. melanogaster","H3K9ac;Y cn bw sp;Larvae L3 stage;ChIP-seq"
"ChIP-seq","H3K9ac","Histone Modification","White, K.","830","fly/White_CS_Pupae/Pupae_H3K9Ac","Histone modification and replacement","data set","Pupae","D. melanogaster","H3K9ac;Y cn bw sp;Pupae;ChIP-seq"
"ChIP-seq","H3K9ac","Histone Modification","White, K.","831","fly/White_CS_Adult_Female/AdultFemale_H3K9Ac","Histone modification and replacement","data set","Adult Female","D. melanogaster","H3K9ac;Y cn bw sp;Adult Female;ChIP-seq"
"ChIP-seq","H3K9ac","Histone Modification","White, K.","832","fly/White_CS_Adult_Male/AdultMale_H3K9Ac","Histone modification and replacement","data set","Adult Male","D. melanogaster","H3K9ac;Y cn bw sp;Adult Male;ChIP-seq"
"ChIP-seq","H3K27ac","Histone Modification","White, K.","834","fly/White_CS_embryo_0_4h/E0_4_H3K27Ac","Histone modification and replacement","data set","Embryos 0-4 hr","D. melanogaster","H3K27ac;Y cn bw sp;Embryos 0-4 hr;ChIP-seq"
"ChIP-seq","H3K27ac","Histone Modification","White, K.","835","fly/White_CS_embryo_4_8h/E4_8_H3K27Ac","Histone modification and replacement","data set","Embryos 4-8 hr","D. melanogaster","H3K27ac;Y cn bw sp;Embryos 4-8 hr;ChIP-seq"
"ChIP-seq","H3K27ac","Histone Modification","White, K.","836","fly/White_CS_embryo_8_12h/E8_12_H3K27Ac","Histone modification and replacement","data set","Embryos 8-12 hr","D. melanogaster","H3K27ac;Y cn bw sp;Embryos 8-12 hr;ChIP-seq"
"ChIP-seq","H3K27ac","Histone Modification","White, K.","837","fly/White_CS_embryo_12_16h/E12_16_H3K27Ac","Histone modification and replacement","data set","Embryos 12-16 hr","D. melanogaster","H3K27ac;Y cn bw sp;Embryos 12-16 hr;ChIP-seq"
"ChIP-seq","H3K27ac","Histone Modification","White, K.","838","fly/White_CS_embryo_16_20h/E16_20_H3K27Ac","Histone modification and replacement","data set","Embryos 16-20 hr","D. melanogaster","H3K27ac;Y cn bw sp;Embryos 16-20 hr;ChIP-seq"
"ChIP-seq","H3K27ac","Histone Modification","White, K.","839","fly/White_CS_embryo_20_24h/E20_24_H3K27Ac","Histone modification and replacement","data set","Embryos 20-24 hr","D. melanogaster","H3K27ac;Y cn bw sp;Embryos 20-24 hr;ChIP-seq"
"ChIP-seq","H3K27ac","Histone Modification","White, K.","840","fly/White_CS_L1/L1_H3K27Ac","Histone modification and replacement","data set","Larvae L1 stage","D. melanogaster","H3K27ac;Y cn bw sp;Larvae L1 stage;ChIP-seq"
"ChIP-seq","H3K27ac","Histone Modification","White, K.","841","fly/White_CS_L2/L2_H3K27Ac","Histone modification and replacement","data set","Larvae L2 stage","D. melanogaster","H3K27ac;Y cn bw sp;Larvae L2 stage;ChIP-seq"
"ChIP-seq","H3K27ac","Histone Modification","White, K.","842","fly/White_CS_L3/L3_H3K27Ac","Histone modification and replacement","data set","Larvae L3 stage","D. melanogaster","H3K27ac;Y cn bw sp;Larvae L3 stage;ChIP-seq"
"ChIP-seq","H3K27ac","Histone Modification","White, K.","843","fly/White_CS_Pupae/Pupae_H3K27Ac","Histone modification and replacement","data set","Pupae","D. melanogaster","H3K27ac;Y cn bw sp;Pupae;ChIP-seq"
"ChIP-seq","H3K27ac","Histone Modification","White, K.","844","fly/White_CS_Adult_Female/AdultFemale_H3K27Ac","Histone modification and replacement","data set","Adult Female","D. melanogaster","H3K27ac;Y cn bw sp;Adult Female;ChIP-seq"
"ChIP-seq","H3K27ac","Histone Modification","White, K.","845","fly/White_CS_Adult_Male/AdultMale_H3K27Ac","Histone modification and replacement","data set","Adult Male","D. melanogaster","H3K27ac;Y cn bw sp;Adult Male;ChIP-seq"
"ChIP-seq","pol2","Non TF Chromatin binding factor","White, K.","846","fly/White_CS_SG_POLII/E4_8_PolII","Other chromatin binding sites","data set","Embryos 4-8 hr","D. melanogaster","pol2;Y cn bw sp;Embryos 4-8 hr;ChIP-seq"
"ChIP-seq","pol2","Non TF Chromatin binding factor","White, K.","847","fly/White_CS_SG_POLII/E8_12_PolII","Other chromatin binding sites","data set","Embryos 8-12 hr","D. melanogaster","pol2;Y cn bw sp;Embryos 8-12 hr;ChIP-seq"
"ChIP-seq","pol2","Non TF Chromatin binding factor","White, K.","848","fly/White_CS_SG_POLII/E12_16_PolII","Other chromatin binding sites","data set","Embryos 12-16 hr","D. melanogaster","pol2;Y cn bw sp;Embryos 12-16 hr;ChIP-seq"
"ChIP-seq","nejire","Non TF Chromatin binding factor","White, K.","849","fly/White_CS_SG_POLII/E16_20_PolII","Other chromatin binding sites","data set","Embryos 16-20 hr","D. melanogaster","nejire;Y cn bw sp;Embryos 16-20 hr;ChIP-seq"
"ChIP-seq","pol2","Non TF Chromatin binding factor","White, K.","850","fly/White_CS_SG_POLII/E20_24_PolII","Other chromatin binding sites","data set","Embryos 20-24 hr","D. melanogaster","pol2;Y cn bw sp;Embryos 20-24 hr;ChIP-seq"
"ChIP-seq","pol2","Non TF Chromatin binding factor","White, K.","851","fly/White_CS_SG_POLII/L1_PolII","Other chromatin binding sites","data set","Larvae L1 stage","D. melanogaster","pol2;Y cn bw sp;Larvae L1 stage;ChIP-seq"
"ChIP-seq","pol2","Non TF Chromatin binding factor","White, K.","852","fly/White_CS_SG_POLII/L3_PolII","Other chromatin binding sites","data set","Larvae L3 stage","D. melanogaster","pol2;Y cn bw sp;Larvae L3 stage;ChIP-seq"
"ChIP-seq","pol2","Non TF Chromatin binding factor","White, K.","853","fly/White_CS_SG_POLII/Pupae_PolII","Other chromatin binding sites","data set","Pupae","D. melanogaster","pol2;Y cn bw sp;Pupae;ChIP-seq"
"ChIP-seq","nejire","Transcriptional Factor","White, K.","854","fly/White_CS_SG_NAJIRE/E0_4_CBP","TF binding sites","data set","Embryos 0-4 hr","D. melanogaster","nejire;Y cn bw sp;Embryos 0-4 hr;ChIP-seq"
"ChIP-seq","nejire","Transcriptional Factor","White, K.","855","fly/White_CS_SG_NAJIRE/E4_8_CBP","TF binding sites","data set","Embryos 4-8 hr","D. melanogaster","nejire;Y cn bw sp;Embryos 4-8 hr;ChIP-seq"
"ChIP-seq","nejire","Transcriptional Factor","White, K.","856","fly/White_CS_SG_NAJIRE/E12_16_CBP","TF binding sites","data set","Embryos 12-16 hr","D. melanogaster","nejire;Y cn bw sp;Embryos 12-16 hr;ChIP-seq"
"ChIP-seq","nejire","Transcriptional Factor","White, K.","857","fly/White_CS_SG_NAJIRE/E16_20_CBP","TF binding sites","data set","Embryos 16-20 hr","D. melanogaster","nejire;Y cn bw sp;Embryos 16-20 hr;ChIP-seq"
"ChIP-seq","nejire","Transcriptional Factor","White, K.","858","fly/White_CS_SG_NAJIRE/E20_24_CBP","TF binding sites","data set","Embryos 20-24 hr","D. melanogaster","nejire;Y cn bw sp;Embryos 20-24 hr;ChIP-seq"
"ChIP-seq","nejire","Transcriptional Factor","White, K.","859","fly/White_CS_SG_NAJIRE/L1_CBP","TF binding sites","data set","Larvae L1 stage","D. melanogaster","nejire;Y cn bw sp;Larvae L1 stage;ChIP-seq"
"ChIP-seq","nejire","Transcriptional Factor","White, K.","860","fly/White_CS_SG_NAJIRE/L3_CBP","TF binding sites","data set","Larvae L3 stage","D. melanogaster","nejire;Y cn bw sp;Larvae L3 stage;ChIP-seq"
"ChIP-seq","nejire","Transcriptional Factor","White, K.","861","fly/White_CS_SG_NAJIRE/Pupae","TF binding sites","data set","Pupae","D. melanogaster","nejire;Y cn bw sp;Pupae;ChIP-seq"
"ChIP-seq","nejire","Transcriptional Factor","White, K.","862","fly/White_CS_SG_NAJIRE/AdultFemale_CBP","TF binding sites","data set","Adult Female","D. melanogaster","nejire;Y cn bw sp;Adult Female;ChIP-seq"
"ChIP-seq","nejire","Transcriptional Factor","White, K.","863","fly/White_CS_SG_NAJIRE/AdultMale_CBP","TF binding sites","data set","Adult Male","D. melanogaster","nejire;Y cn bw sp;Adult Male;ChIP-seq"
"ChIP-chip","H3K4me1","Histone Modification","White, K.","864","fly/White_CC_embryo_8_12h/E8_12_H3K4Me1","Histone modification and replacement","data set","Embryos 8-12 hr","D. melanogaster","H3K4me1;Embryos 8-12 hr;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","White, K.","865","fly/White_CC_embryo_8_12h/E8_12_H3K4Me3","Histone modification and replacement","data set","Embryos 8-12 hr","D. melanogaster","H3K4me3;Embryos 8-12 hr;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","White, K.","866","fly/White_CC_embryo_8_12h/E8_12_H3K9Me3","Histone modification and replacement","data set","Embryos 8-12 hr","D. melanogaster","H3K9me3;Embryos 8-12 hr;ChIP-chip"
"ChIP-chip","H3K27me3","Histone Modification","White, K.","867","fly/White_CC_embryo_0_4h/E0_4_H3K27Me3","Histone modification and replacement","data set","Embryos 0-4 hr","D. melanogaster","H3K27me3;Y cn bw sp;Embryos 0-4 hr;ChIP-chip"
"ChIP-chip","H3K27me3","Histone Modification","White, K.","868","fly/White_CC_embryo_8_12h/E8_12_H3K27Me3","Histone modification and replacement","data set","Embryos 8-12 hr","D. melanogaster","H3K27me3;Embryos 8-12 hr;ChIP-chip"
"ChIP-chip","H3K27me3","Histone Modification","White, K.","869","fly/White_CC_Adult_Male/AdM_H3K27Me3_set2","Histone modification and replacement","data set","Adult Male","D. melanogaster","H3K27me3;Adult Male;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","White, K.","870","fly/White_CC_embryo_8_12h/E8_12_H3K9Ac","Histone modification and replacement","data set","Embryos 8-12 hr","D. melanogaster","H3K9ac;Y cn bw sp;Embryos 8-12 hr;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","White, K.","871","fly/White_CC_Adult_Male/AdultMale_H3K9Ac_Set2","Histone modification and replacement","data set","Adult Male","D. melanogaster","H3K9ac;Adult Male;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","White, K.","872","fly/White_CC_embryo_8_12h/E8_12_H3K27Ac","Histone modification and replacement","data set","Embryos 8-12 hr","D. melanogaster","H3K27ac;Y cn bw sp;Embryos 8-12 hr;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","White, K.","873","fly/White_CC_Adult_Male/AdultMale_H3K27Ac","Histone modification and replacement","data set","Adult Male","D. melanogaster","H3K27ac;Adult Male;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","White, K.","874","fly/White_CC_Adult_Male/AdultMale_H3K27Ac_set2","Histone modification and replacement","data set","Adult Male","D. melanogaster","H3K27ac;Adult Male;ChIP-chip"
"ChIP-chip","nejire","Non TF Chromatin binding factor","White, K.","875","fly/White_CC_SG_NAJIRE/E0_4_CBP","Other chromatin binding sites","data set","Embryos 0-4 hr","D. melanogaster","nejire;Embryos 0-4 hr;ChIP-chip"
"ChIP-chip","nejire","Transcriptional Factor","White, K.","876","fly/White_CC_SG_NAJIRE/E4_8_CBP","TF binding sites","data set","Embryos 4-8 hr","D. melanogaster","nejire;Embryos 4-8 hr;ChIP-chip"
"ChIP-chip","nejire","Transcriptional Factor","White, K.","877","fly/White_CC_SG_NAJIRE/E16_20_CBP","TF binding sites","data set","Embryos 16-20 hr","D. melanogaster","nejire;Embryos 16-20 hr;ChIP-chip"
"ChIP-chip","nejire","Transcriptional Factor","White, K.","878","fly/White_CC_SG_NAJIRE/L1_CBP","TF binding sites","data set","Larvae L1 stage","D. melanogaster","nejire;Larvae L1 stage;ChIP-chip"
"ChIP-chip","nejire","Transcriptional Factor","White, K.","879","fly/White_CC_SG_NAJIRE/L3_CBP","TF binding sites","data set","Larvae L3 stage","D. melanogaster","nejire;Larvae L3 stage;ChIP-chip"
"ChIP-chip","nejire","Transcriptional Factor","White, K.","880","fly/White_CC_SG_NAJIRE/Pupae_CBP","TF binding sites","data set","Pupae","D. melanogaster","nejire;Pupae;ChIP-chip"
"ChIP-chip","nejire","Transcriptional Factor","White, K.","881","fly/White_CC_SG_NAJIRE/AdultFemale_CBP","TF binding sites","data set","Adult Female","D. melanogaster","nejire;Adult Female;ChIP-chip"
"ChIP-chip","nejire","Transcriptional Factor","White, K.","882","fly/White_CC_SG_NAJIRE/AdultMale_CBP","TF binding sites","data set","Adult Male","D. melanogaster","nejire;Adult Male;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","White, K.","883","fly/White_CC_SG_POLII/L2_PolII","Other chromatin binding sites","data set","Larvae L2 stage","D. melanogaster","pol2;Larvae L2 stage;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","White, K.","884","fly/White_CC_SG_POLII/L3_PolII","Other chromatin binding sites","data set","Larvae L3 stage","D. melanogaster","pol2;Larvae L3 stage;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","White, K.","885","fly/White_CC_SG_8WG16/E0_4_8wg16_set2","Other chromatin binding sites","data set","Embryos 0-4 hr","D. melanogaster","pol2;Embryos 0-4 hr;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","White, K.","886","fly/White_CC_SG_8WG16/E4_8_8wg16_set2","Other chromatin binding sites","data set","Embryos 4-8 hr","D. melanogaster","pol2;Embryos 4-8 hr;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","White, K.","887","fly/White_CC_SG_8WG16/E4_8_8wg16","Other chromatin binding sites","data set","Embryos 4-8 hr","D. melanogaster","pol2;Embryos 4-8 hr;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","White, K.","888","fly/White_CC_SG_8WG16/E16_20_8wg16_set2","Other chromatin binding sites","data set","Embryos 16-20 hr","D. melanogaster","pol2;Embryos 16-20 hr;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","White, K.","889","fly/White_CC_SG_8WG16/L3_8wg16","Other chromatin binding sites","data set","Larvae L3 stage","D. melanogaster","pol2;Larvae L3 stage;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","White, K.","890","fly/White_CC_SG_8WG16/Pupae_PolII_set2","Other chromatin binding sites","data set","Pupae","D. melanogaster","pol2;Y cn bw sp;Pupae;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","White, K.","891","fly/White_CC_SG_8WG16/AdultFemale_8wg16_set2","Other chromatin binding sites","data set","Adult Female","D. melanogaster","pol2;Adult Female;ChIP-chip"
"ChIP-seq","H3K27ac","Histone Modification","White, K.","895","fly/White_CS_L2/L2_H3K27Ac_set2","Histone modification and replacement","data set","Larvae L2 stage","D. melanogaster","H3K27ac;Y cn bw sp;Larvae L2 stage;ChIP-seq"
"RACE","3-prime-UTR","mRNA","Piano, F.","896","worm/L2_pilot.sam_sorted","Gene Structure","data set","Mixed Embryos","C. elegans","3-prime-UTR;N2;Mixed Embryos;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","896","worm/L3_pilot.sam_sorted","Gene Structure","data set","Mixed Embryos","C. elegans","3-prime-UTR;N2;Mixed Embryos;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","896","worm/emb_pilot.sam_sorted","Gene Structure","data set","Mixed Embryos","C. elegans","3-prime-UTR;N2;Mixed Embryos;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","896","worm/L4_pilot.sam_sorted","Gene Structure","data set","Mixed Embryos","C. elegans","3-prime-UTR;N2;Mixed Embryos;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","896","worm/L1_pilot.sam_sorted","Gene Structure","data set","Mixed Embryos","C. elegans","3-prime-UTR;N2;Mixed Embryos;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","896","worm/YA_herm_pilot.sam_sorted","Gene Structure","data set","Mixed Embryos","C. elegans","3-prime-UTR;N2;Mixed Embryos;20 degree celsius;RACE"
"ChIP-chip","MRG1","Non TF Chromatin binding factor","Lieb, J.","897","worm/LIEB_WIG_CHIPCHIP_CHR_MRG1","Other chromatin binding sites","data set","Early Embryos","C. elegans","MRG1;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","Kruppel","Transcriptional Factor","White, K.","898","fly/White_CC_SG_GAP/E0_8_Kr_D2","TF binding sites","data set","Embryos 0-8 hr","D. melanogaster","Kruppel;Y cn bw sp;Embryos 0-8 hr;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","White, K.","899","fly/White_CC_SG_POLII/E0_12_PolII","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","pol2;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","nejire","Non TF Chromatin binding factor","White, K.","900","fly/White_CC_SG_NAJIRE/E0_4_CBP","Other chromatin binding sites","data set","Embryos 0-4 hr","D. melanogaster","nejire;Embryos 0-4 hr;ChIP-chip"
"ChIP-chip","Su(Hw)","Non TF Chromatin binding factor","White, K.","901","fly/White_INSULATORS_WIG/E0_12_SuHw_PG","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","Su(Hw);Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","Caudal","Transcriptional Factor","White, K.","902","fly/White_CC_SG_GAP/E0_4_GFP_7T","TF binding sites","data set","Embryos 0-4 hr","D. melanogaster","Caudal;7T-CAD;Embryos 0-4 hr;ChIP-chip"
"ChIP-chip","nejire","Non TF Chromatin binding factor","White, K.","903","fly/White_CC_SG_NAJIRE/E8_12_CBP_set2","Other chromatin binding sites","data set","Embryos 8-12 hr","D. melanogaster","nejire;Y cn bw sp;Embryos 8-12 hr;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","White, K.","904","fly/White_CC_SG_8WG16/L2_8wg16_set2","Other chromatin binding sites","data set","Larvae L2 stage","D. melanogaster","pol2;Y cn bw sp;Larvae L2 stage;ChIP-chip"
"ChIP-chip","nejire","Non TF Chromatin binding factor","White, K.","905","fly/White_CC_SG_NAJIRE/E12_16_CBP","Other chromatin binding sites","data set","Embryos 12-16 hr","D. melanogaster","nejire;Y cn bw sp;Embryos 12-16 hr;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","White, K.","906","fly/White_CC_SG_POLII/E12_16_PolII","Other chromatin binding sites","data set","Embryos 12-16 hr","D. melanogaster","pol2;Y cn bw sp;Embryos 12-16 hr;ChIP-chip"
"ChIP-chip","CTCF","Non TF Chromatin binding factor","White, K.","908","fly/White_INSULATORS_WIG/CTCF_N_Kc167","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","CTCF;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Lieb, J.","909","worm/LIEB_WIG_CHIPCHIP_H3K36/H3K36ME22C3_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K36me3;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","MES-4","Non TF Chromatin binding factor","Lieb, J.","911","worm/LIEB_WIG_CHIPCHIP_CHR_MES4/MES4_N2_EEMB","Other chromatin binding sites","data set","Early Embryos","C. elegans","MES-4;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","White, K.","912","fly/White_CC_Kc167","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K4me3;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","CTCF","Non TF Chromatin binding factor","White, K.","913","fly/White_INSULATORS_WIG/CTCF_N_S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","CTCF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","White, K.","914","fly/White_CC_S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K4me3;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"RNA-tiling-array","total-RNA","mRNA","White, K.","918","fly/White_CC_SG_CONTROL","RNA expression profiling","data set","Embryos 0-12 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 0-12 hr;RNA-tiling-array"
"ChIP-chip","H3K27me3","Histone Modification","White, K.","919","fly/White_CC_embryo_0_12h/E0_12_H3K27Me3","Histone modification and replacement","data set","Embryos 0-12 hr","D. melanogaster","H3K27me3;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","BEAF-32","Non TF Chromatin binding factor","Karpen, G.","921","fly/KARPEN_CHIPCHIP_INS_BG3/BEAF-70.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","BEAF-32;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","BEAF-32","Non TF Chromatin binding factor","Karpen, G.","922","fly/KARPEN_CHIPCHIP_INS_S2/BEAF-70.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","BEAF-32;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","BRE1","Non TF Chromatin binding factor","Karpen, G.","923","fly/KARPEN_CHIPCHIP_HISMODENZ_S2/BRE1_Q2539.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","BRE1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","CP190","Non TF Chromatin binding factor","Karpen, G.","924","fly/KARPEN_CHIPCHIP_INS_BG3/CP190-HB.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","CP190;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","CP190","Non TF Chromatin binding factor","Karpen, G.","925","fly/KARPEN_CHIPCHIP_INS_S2/CP190-HB.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","CP190;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","dMi-2","Non TF Chromatin binding factor","Karpen, G.","926","fly/KARPEN_CHIPCHIP_HISMODENZ_S2/dMi_2_Q2626.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","dMi-2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","dRING","Non TF Chromatin binding factor","Karpen, G.","927","fly/KARPEN_CHIPCHIP_HISMODENZ_BG3/dRING_Q3200.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","dRING;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","dRING","Non TF Chromatin binding factor","Karpen, G.","928","fly/KARPEN_CHIPCHIP_HISMODENZ_S2/dRING_Q3200.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","dRING;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K18ac","Histone Modification","Karpen, G.","930","fly/KARPEN_CHIPCHIP_HISMODS_H3_CL8/H3K18Ac_new.lot.Clone_8","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K18ac;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Karpen, G.","931","fly/KARPEN_CHIPCHIP_HISMODS_H3_OR/H3K36Me3_14_16h_OR_embryo","Histone modification and replacement","data set","Embryos 14-16 hr OR","D. melanogaster","H3K36me3;Oregon-R;Embryos 14-16 hr OR;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Karpen, G.","932","fly/KARPEN_CHIPCHIP_HISMODS_H3_OR/H3K36Me3_2_4h_OR_embryo","Histone modification and replacement","data set","Embryos 2-4 hr OR","D. melanogaster","H3K36me3;Oregon-R;Embryos 2-4 hr OR;ChIP-chip"
"ChIP-chip","H3K9me2","Histone Modification","Karpen, G.","936","fly/KARPEN_CHIPCHIP_HISMODS_H3_OR/H3K9Me2_Ab2_new.lot.2_4h_OR_embryo","Histone modification and replacement","data set","Embryos 2-4 hr OR","D. melanogaster","H3K9me2;Oregon-R;Embryos 2-4 hr OR;ChIP-chip"
"ChIP-chip","H3K9me2","Histone Modification","Karpen, G.","937","fly/KARPEN_CHIPCHIP_HISMODS_H3_CL8/H3K9Me2_Ab2_new.lot.Clone_8","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K9me2;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","H3K9me2","Histone Modification","Karpen, G.","938","fly/KARPEN_CHIPCHIP_HISMODS_H3_KC/H3K9Me2_Ab2_new.lot.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K9me2;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","Karpen, G.","940","fly/KARPEN_CHIPCHIP_HISMODS_H3_CL8/H3K9Me3_new.lot.Clone_8","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K9me3;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","HP1b","Non TF Chromatin binding factor","Karpen, G.","941","fly/KARPEN_CHIPCHIP_CHRPROT_S2/HP1b_Henikoff.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","HP1b;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","HP1c","Non TF Chromatin binding factor","Karpen, G.","942","fly/KARPEN_CHIPCHIP_CHRPROT_BG3/HP1c_MO462.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","HP1c;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","HP1c","Non TF Chromatin binding factor","Karpen, G.","943","fly/KARPEN_CHIPCHIP_CHRPROT_S2/HP1c_MO462.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","HP1c;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","HP2","Non TF Chromatin binding factor","Karpen, G.","944","fly/KARPEN_CHIPCHIP_CHRPROT_S2/HP2_Ab2-90.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","HP2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","JIL-1","Non TF Chromatin binding factor","Karpen, G.","945","fly/KARPEN_CHIPCHIP_DOSCOMP_S2/JIL1_Q3433.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","JIL-1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","MBD-R2","Non TF Chromatin binding factor","Karpen, G.","946","fly/KARPEN_CHIPCHIP_CHRPROT_S2/WDS_Q2691.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","MBD-R2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","NURF301","Non TF Chromatin binding factor","Karpen, G.","947","fly/KARPEN_CHIPCHIP_HISMODENZ_S2/NURF301_Q2602.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","NURF301;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","PCL","Non TF Chromatin binding factor","Karpen, G.","948","fly/KARPEN_CHIPCHIP_POLYCOMB_BG3/PCL_Q3412.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","PCL;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","PIWI","Non TF Chromatin binding factor","Karpen, G.","949","fly/KARPEN_CHIPCHIP_REMODEL_KC/PIWI-Q2569.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","PIWI;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","Karpen, G.","950","fly/KARPEN_CHIPCHIP_CHRPROT_BG3/POL_II_ALG.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","pol2;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","Su(Hw)","Non TF Chromatin binding factor","Karpen, G.","951","fly/KARPEN_CHIPCHIP_CHRPROT_BG3/Su_Hw-HB.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","Su(Hw);ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","Su(var)3-9","Non TF Chromatin binding factor","Karpen, G.","952","fly/KARPEN_CHIPCHIP_HISMODENZ_BG3/Su_var.3_9.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","Su(var)3-9;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","WDS","Non TF Chromatin binding factor","Karpen, G.","953","fly/KARPEN_CHIPCHIP_CHRPROT_S2/WDS_Q2691.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","WDS;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K4me2","Histone Modification","Karpen, G.","954","fly/KARPEN_CHIPCHIP_HISMODS_H3_OR/H3K4Me2_OR_HEADnuc","Histone modification and replacement","data set","Mixed Adult","D. melanogaster","H3K4me2;Oregon-R;Mixed Adult;Heads OR;ChIP-chip"
"ChIP-chip","HP1a","Non TF Chromatin binding factor","Karpen, G.","955","fly/KARPEN_CHIPCHIP_CHROMPROTS_L3/HP1_Dm_L3nuc","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","HP1a;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","H3K9me2","Histone Modification","Karpen, G.","956","fly/KARPEN_CHIPCHIP_HISMODS_H3_L3/H3K9me2antibody2.D.melL3Nuclei","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K9me2;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","HP1a","Non TF Chromatin binding factor","Karpen, G.","957","fly/KARPEN_CHIPCHIP_CHROMPROT_OR/HP1_OR_HEADnuc","Other chromatin binding sites","data set","Mixed Adult","D. melanogaster","HP1a;Oregon-R;Mixed Adult;Heads OR;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","Karpen, G.","958","fly/KARPEN_CHIPCHIP_HISMODS_H3_L3/H3K9Me3_new.lot.Dm_L3nuc","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K9me3;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","H3K79me1","Histone Modification","Karpen, G.","963","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K79Me.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K79me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","Karpen, G.","964","fly/KARPEN_CHIPCHIP_HISMODS_H3_CL8/H3K9Ac.Clone_8","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K9ac;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","H3K4me2","Histone Modification","Karpen, G.","965","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K4Me2.Ab.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K4me2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","Karpen, G.","966","fly/KARPEN_CHIPCHIP_HISMODS_H3_OR/H3K4Me3_LP_2_4h_OR_embryo","Histone modification and replacement","data set","Embryos 2-4 hr OR","D. melanogaster","H3K4me3;Oregon-R;Embryos 2-4 hr OR;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","Karpen, G.","967","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K4Me3.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K4me3;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","White, K.","970","fly/White_CC_embryo_0_4h/E0_4_H3K27Ac_set2","Histone modification and replacement","data set","Embryos 0-4 hr","D. melanogaster","H3K27ac;Y cn bw sp;Embryos 0-4 hr;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","White, K.","971","fly/White_CC_embryo_0_4h/E0_4_H3K9Me3_set2","Histone modification and replacement","data set","Embryos 0-4 hr","D. melanogaster","H3K9me3;Y cn bw sp;Embryos 0-4 hr;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Lieb, J.","973","worm/LIEB_WIG_CHIPCHIP_H3K36/H3K36ME313C9_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K36me3;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","senseless","Transcriptional Factor","White, K.","978","fly/White_CC_SG_PRONEUR/E4_8_sens","TF binding sites","data set","Embryos 4-8 hr","D. melanogaster","senseless;Embryos 4-8 hr;ChIP-chip"
"ChIP-chip","senseless","Transcriptional Factor","White, K.","979","fly/White_CC_SG_PRONEUR/E4_8_GFP_sens","TF binding sites","data set","Embryos 4-8 hr","D. melanogaster","senseless;SENS-GFP;Embryos 4-8 hr;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","Lieb, J.","982","worm/LIEB_WIG_CHIPCHIP_H3K9/H3K9ME32F3_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K9me3;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-seq","pol2","Non TF Chromatin binding factor","White, K.","984","fly/White_CS_SG_POLII/L2_PolII","Other chromatin binding sites","data set","Larvae L2 stage","D. melanogaster","pol2;Y cn bw sp;Larvae L2 stage;ChIP-seq"
"ChIP-seq","nejire","Transcriptional Factor","White, K.","985","fly/White_CS_SG_NAJIRE/E8_12_CBP_set2","TF binding sites","data set","Embryos 8-12 hr","D. melanogaster","nejire;Y cn bw sp;Embryos 8-12 hr;ChIP-seq"
"RACE","3-prime-UTR","mRNA","Piano, F.","992","worm/L2_pilot.sam_sorted","Gene Structure","data set","Mixed Embryos","C. elegans","3-prime-UTR;N2;Mixed Embryos;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","992","worm/L3_pilot.sam_sorted","Gene Structure","data set","Mixed Embryos","C. elegans","3-prime-UTR;N2;Mixed Embryos;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","992","worm/emb_pilot.sam_sorted","Gene Structure","data set","Mixed Embryos","C. elegans","3-prime-UTR;N2;Mixed Embryos;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","992","worm/L4_pilot.sam_sorted","Gene Structure","data set","Mixed Embryos","C. elegans","3-prime-UTR;N2;Mixed Embryos;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","992","worm/L1_pilot.sam_sorted","Gene Structure","data set","Mixed Embryos","C. elegans","3-prime-UTR;N2;Mixed Embryos;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","992","worm/YA_herm_pilot.sam_sorted","Gene Structure","data set","Mixed Embryos","C. elegans","3-prime-UTR;N2;Mixed Embryos;20 degree celsius;RACE"
"RACE","UTR","mRNA","Celniker, S.","1040","fly/RACE_454_match_ALL","Gene Structure","data set","Mixed Embryos 0-24 hr","D. melanogaster","UTR;Y cn bw sp;Mixed Embryos 0-24 hr;RACE"
"RACE","UTR","mRNA","Celniker, S.","1041","fly/RACE_454_match_ALL","Gene Structure","data set","Mixed Embryos 0-24 hr","D. melanogaster","UTR;Y cn bw sp;Mixed Embryos 0-24 hr;RACE"
"RACE","UTR","mRNA","Celniker, S.","1042","fly/RACE_454_match_ALL","Gene Structure","data set","Mixed Embryos 0-24 hr","D. melanogaster","UTR;Y cn bw sp;Mixed Embryos 0-24 hr;RACE"
"RACE","UTR","mRNA","Celniker, S.","1043","fly/RACE_454_match_ALL","Gene Structure","data set","Mixed Embryos 0-24 hr","D. melanogaster","UTR;Y cn bw sp;Mixed Embryos 0-24 hr;RACE"
"RACE","UTR","mRNA","Celniker, S.","1044","fly/RACE_454_match_ALL","Gene Structure","data set","Mixed Embryos 0-24 hr","D. melanogaster","UTR;Y cn bw sp;Mixed Embryos 0-24 hr;RACE"
"RNA-seq","small-RNA","small RNA","Lai, E.","2005","fly/Lai_RNASEQ_DUAL_CELLS/ML-DmD21_BS90","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmD21;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2005","fly/ML_V021.sam.gz.bam.sorted","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmD21;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2006","fly/1182_V026.sam.gz.bam.sorted","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;1182-4H;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2006","fly/Lai_RNASEQ_DUAL_CELLS/1182-4Hcell_BS23","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;1182-4H;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2008","fly/YAM01_V083.sam.gz.bam.sorted","RNA expression profiling","data set","Adult Male, eclosion + 1 day","D. melanogaster","small-RNA;Y cn bw sp;Adult Male, eclosion + 1 day;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2008","fly/Lai_RNASEQ_DUAL_PE/1day_AdultFemale_BS152","RNA expression profiling","data set","Adult Male, eclosion + 1 day","D. melanogaster","small-RNA;Y cn bw sp;Adult Male, eclosion + 1 day;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2009","fly/Lai_RNASEQ_DUAL_PE/1day_AdultMale_BS149","RNA expression profiling","data set","Adult Female, eclosion + 1 day","D. melanogaster","small-RNA;Y cn bw sp;Adult Female, eclosion + 1 day;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2009","fly/YAF01_V084.sam.bam.sorted","RNA expression profiling","data set","Adult Female, eclosion + 1 day","D. melanogaster","small-RNA;Y cn bw sp;Adult Female, eclosion + 1 day;RNA-seq"
"RNA-seq","PolyA-RNA","mRNA","White, K.","2010","fly/E0-4_accepted_hits.sam.bam.sorted","RNA expression profiling","data set","Embryos 0-4 hr","D. melanogaster","PolyA-RNA;Y cn bw sp;Embryos 0-4 hr;RNA-seq"
"RNA-seq","PolyA-RNA","mRNA","White, K.","2019","fly/E04-8_accepted_hits.sam.bam.sorted","RNA expression profiling","data set","Embryos 4-8 hr","D. melanogaster","PolyA-RNA;Y cn bw sp;Embryos 4-8 hr;RNA-seq"
"RNA-seq","PolyA-RNA","mRNA","White, K.","2020","fly/E08-12_accepted_hits.sam.bam.sorted","RNA expression profiling","data set","Embryos 8-12 hr","D. melanogaster","PolyA-RNA;Y cn bw sp;Embryos 8-12 hr;RNA-seq"
"RNA-seq","PolyA-RNA","mRNA","White, K.","2021","fly/E12-16_accepted_hits.sam.bam.sorted","RNA expression profiling","data set","Embryos 12-16 hr","D. melanogaster","PolyA-RNA;Y cn bw sp;Embryos 12-16 hr;RNA-seq"
"RNA-seq","PolyA-RNA","mRNA","White, K.","2022","fly/E16-20_accepted_hits.sam.bam.sorted","RNA expression profiling","data set","Embryos 16-20 hr","D. melanogaster","PolyA-RNA;Y cn bw sp;Embryos 16-20 hr;RNA-seq"
"RNA-seq","PolyA-RNA","mRNA","White, K.","2023","fly/E20-24_accepted_hits.sam.bam.sorted","RNA expression profiling","data set","Embryos 20-24 hr","D. melanogaster","PolyA-RNA;Y cn bw sp;Embryos 20-24 hr;RNA-seq"
"RNA-seq","PolyA-RNA","mRNA","White, K.","2024","fly/L1_accepted_hits.sam.bam.sorted","RNA expression profiling","data set","Larvae L1 stage","D. melanogaster","PolyA-RNA;Y cn bw sp;Larvae L1 stage;RNA-seq"
"RNA-seq","PolyA-RNA","mRNA","White, K.","2025","fly/L2_accepted_hits.sam.bam.sorted","RNA expression profiling","data set","Larvae L2 stage","D. melanogaster","PolyA-RNA;Y cn bw sp;Larvae L2 stage;RNA-seq"
"RNA-seq","PolyA-RNA","mRNA","White, K.","2026","fly/YAdultFemale_accepted_hits.sam.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","PolyA-RNA;Y cn bw sp;Adult Female;RNA-seq"
"RNA-seq","PolyA-RNA","mRNA","White, K.","2027","fly/YAdultMale_accepted_hits.sam.bam.sorted","RNA expression profiling","data set","Adult Male","D. melanogaster","PolyA-RNA;Y cn bw sp;Adult Male;RNA-seq"
"RNA-seq","PolyA-RNA","mRNA","White, K.","2029","fly/L3_accepted_hits.sam.bam.sorted","RNA expression profiling","data set","Larvae L3 stage","D. melanogaster","PolyA-RNA;Y cn bw sp;Larvae L3 stage;RNA-seq"
"RNA-seq","PolyA-RNA","mRNA","White, K.","2030","fly/Pupae_accepted_hits.sam.bam.sorted","RNA expression profiling","data set","Pupae","D. melanogaster","PolyA-RNA;Y cn bw sp;Pupae;RNA-seq"
"RT-PCR","total-RNA","mRNA","Waterston, R.","2304","worm/Waterston_match_part_3637_2304","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;ggacactgacatggactgaaggagta;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","2304","worm/Waterston_intron_3637_2304","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;ggacactgacatggactgaaggagta;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","2304","worm/Waterston_EST_match_all/IntronsChrII","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;ggacactgacatggactgaaggagta;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","2304","worm/Waterston_intron_all/IntronsChrII","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;ggacactgacatggactgaaggagta;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"ChIP-chip","H3","Histone Modification","Lieb, J.","2312","worm/LIEB_WIG_CHIPCHIP_COREHIS/H3144_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3","Histone Modification","Lieb, J.","2313","worm/LIEB_WIG_CHIPCHIP_COREHIS/H3609253_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3;Early Embryos;20 degree celsius;ChIP-chip"
"RACE","3-prime-UTR","mRNA","Piano, F.","2327","worm/UTRome_V2_3_three_prime_UTR_6102_2745","Gene Structure","data set","L1 8 hr post-L1 stage larvae","C. elegans","3-prime-UTR;N2;L1 8 hr post-L1 stage larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2327","worm/UTRome_V2_3_polyA_signal_sequence_6102_2745","Gene Structure","data set","L1 8 hr post-L1 stage larvae","C. elegans","3-prime-UTR;N2;L1 8 hr post-L1 stage larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2327","worm/L1.ws220.sam_sorted","Gene Structure","data set","L1 8 hr post-L1 stage larvae","C. elegans","3-prime-UTR;N2;L1 8 hr post-L1 stage larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2327","worm/UTRome_V2_3_polyA_site_6102_2745","Gene Structure","data set","L1 8 hr post-L1 stage larvae","C. elegans","3-prime-UTR;N2;L1 8 hr post-L1 stage larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2328","worm/L2.ws220.sam_sorted","Gene Structure","data set","L2 20 hr post-L1 stage larvae","C. elegans","3-prime-UTR;N2;L2 20 hr post-L1 stage larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2329","worm/L3.ws220.sam_sorted","Gene Structure","data set","L3 30 hr post-L1 stage larvae","C. elegans","3-prime-UTR;N2;L3 30 hr post-L1 stage larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2330","worm/L4.ws220.sam_sorted","Gene Structure","data set","L4 45 hr post-L1 stage larvae","C. elegans","3-prime-UTR;N2;L4 45 hr post-L1 stage larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2331","worm/E.ws220.sam_sorted","Gene Structure","data set","Mixed Embryos","C. elegans","3-prime-UTR;N2;Mixed Embryos;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2332","worm/YA_herm.ws220.sam_sorted","Gene Structure","data set","Adult 70 hr post-L1 stage larvae","C. elegans","3-prime-UTR;N2;Adult 70 hr post-L1 stage larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2333","worm/YM_male.ws220.sam_sorted","Gene Structure","data set","Adult Males 70 hr post-L1 stage larvae","C. elegans","3-prime-UTR;him-8(e1489);Adult Males 70 hr post-L1 stage larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2334","worm/L33daf11.ws220.sam_sorted","Gene Structure","data set","Dauer Larvae","C. elegans","3-prime-UTR;daf-11(m47);Dauer Larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2335","worm/L33daf02.ws220.sam_sorted","Gene Structure","data set","Dauer Larvae","C. elegans","3-prime-UTR;daf-2(e1370);Dauer Larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2336","worm/L33daf07.ws220.sam_sorted","Gene Structure","data set","Dauer Larvae","C. elegans","3-prime-UTR;daf-7(e1372);Dauer Larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2337","worm/L33daf09.ws220.sam_sorted","Gene Structure","data set","Dauer Larvae","C. elegans","3-prime-UTR;daf-9(m540);Dauer Larvae;20 degree celsius;RACE"
"ChIP-chip","H3K36me2","Histone Modification","Lieb, J.","2338","worm/LIEB_WIG_CHIPCHIP_H3K36/H3K36ME2608457_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K36me2;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","Lieb, J.","2339","worm/LIEB_WIG_CHIPCHIP_H3K79/H3K79ME1361912_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K9me3;Early Embryos;20 degree celsius;ChIP-chip"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","2340","fly/CEL_TISSUES/Dm_MatedOvary_F_4d","RNA expression profiling","data set","Adult Female, eclosion + 4 days","D. melanogaster","total-RNA;Oregon-R;Adult Female, eclosion + 4 days;Adult ovaries;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","2341","fly/CEL_TISSUES/Dm_VirginHead_F_1d","RNA expression profiling","data set","Adult Female, eclosion + 1 day","D. melanogaster","total-RNA;Oregon-R;Adult Female, eclosion + 1 day;Female heads;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","2342","fly/CEL_TISSUES/Dm_VirginHead_F_4d","RNA expression profiling","data set","Adult Female, eclosion + 1 day","D. melanogaster","total-RNA;Oregon-R;Adult Female, eclosion + 1 day;Female heads;RNA-tiling-array"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2354","worm/YA_Young_Adult_25dC_46hrs_post-L1.alignments.ws220.bam.sorted","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"ChIP-chip","no-antibody-control","Non TF Chromatin binding factor","Lieb, J.","2364","worm/LIEB_WIG_CHIPCHIP_H3K36/NA_N2_EEMB","Other chromatin binding sites","data set","Early Embryos","C. elegans","no-antibody-control;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","no-antibody-control","Non TF Chromatin binding factor","Lieb, J.","2364","worm/LIEB_WIG_CHIPCHIP_H3K9/NA_N2_EEMB","Other chromatin binding sites","data set","Early Embryos","C. elegans","no-antibody-control;Early Embryos;20 degree celsius;ChIP-chip"
"RNA-seq","small-RNA","small RNA","Lai, E.","2374","fly/Lai_RNASEQ_DUAL_CELLS/Kc167_Rubin","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;Kc-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2374","fly/KC_GSM399110.sam.gz.bam.sorted","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;Kc-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2375","fly/Lai_RNASEQ_DUAL_CELLS/S2_NP","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-NP;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2375","fly/S2_GSM371638.sam.gz.bam.sorted","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-NP;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2376","fly/ID_GSM399105.sam.bam.sorted","RNA expression profiling","data set","Adult Male","D. melanogaster","small-RNA;Canton S;Adult Male;Imaginal disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2376","fly/Lai_RNASEQ_DUAL_T/imaginal_disc_brain","RNA expression profiling","data set","Adult Male","D. melanogaster","small-RNA;Canton S;Adult Male;Imaginal disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2379","fly/S22_GSM280087.sam.bam.sorted","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2379","fly/Lai_RNASEQ_DUAL_ENR_C/S2cells_Ago2IP","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2380","fly/S21_GSM280088.sam.bam.sorted","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2380","fly/Lai_RNASEQ_DUAL_ENR_C/S2cells_Ago1IP","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2381","fly/Lai_RNASEQ_DUAL_ENR_T/Adult_ovaries_AGO2IP","RNA expression profiling","data set","Adult","D. melanogaster","small-RNA;Y cn bw sp;Adult;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2381","fly/YA_GSM280086.sam.bam.sorted","RNA expression profiling","data set","Adult","D. melanogaster","small-RNA;Y cn bw sp;Adult;Adult ovaries;RNA-seq"
"ChIP-chip","no-antibody-control","Non TF Chromatin binding factor","Lieb, J.","2382","worm/LIEB_WIG_CHIPCHIP_DC/IGG_N2_EEMB","Other chromatin binding sites","data set","Early Embryos","C. elegans","no-antibody-control;Early Embryos;20 degree celsius;ChIP-chip"
"CGH","Replication-Copy-Number","Copy Number Variation","MacAlpine, D.","2384","fly/MacAlpine_CGH_WIG/Follicle_OregonR_mod","Copy Number Variation","data set","Adult Female, eclosion + 1 day","D. melanogaster","Replication-Copy-Number;Oregon-R;Adult Female, eclosion + 1 day;oocyte associated follicle cell;CGH"
"CGH","Replication-Copy-Number","Copy Number Variation","MacAlpine, D.","2385","fly/MacAlpine_CGH_WIG/Salivary_Y_cn_bw_sp","Copy Number Variation","data set","Adult Female, eclosion + 1 day","D. melanogaster","Replication-Copy-Number;Oregon-R Orr-Weaver;Adult Female, eclosion + 1 day;oocyte associated follicle cell;CGH"
"ChIP-chip","H3K9me3","Histone Modification","Lieb, J.","2398","worm/LIEB_WIG_CHIPCHIP_H3K9/H3K9ME32F3_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K9me3;N2;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Lieb, J.","2399","worm/LIEB_WIG_CHIPCHIP_H3K36/H3K36ME22C3_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K36me3;N2;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K27me3","Histone Modification","Lieb, J.","2400","worm/LIEB_WIG_CHIPCHIP_H3K27/H3K27ME31E7_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K27me3;N2;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Lieb, J.","2401","worm/LIEB_WIG_CHIPCHIP_H3K36/H3K36ME313C9_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K36me3;N2;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K4me2","Histone Modification","Lieb, J.","2402","worm/LIEB_WIG_CHIPCHIP_H3K4/H3K4ME2_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K4me2;N2;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K9me2","Histone Modification","Lieb, J.","2406","worm/LIEB_WIG_CHIPCHIP_H3K9/H3K9ME26D11_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K9me2;N2;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3","Histone Modification","Lieb, J.","2407","worm/LIEB_WIG_CHIPCHIP_COREHIS/H3144_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3;N2;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3","Histone Modification","Lieb, J.","2408","worm/LIEB_WIG_CHIPCHIP_COREHIS/H3144_N2_L3_LM","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3;N2;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3","Histone Modification","Lieb, J.","2409","worm/LIEB_WIG_CHIPCHIP_COREHIS/H3_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3;N2;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K79me1","Histone Modification","Lieb, J.","2410","worm/LIEB_WIG_CHIPCHIP_H3K9/H3K9ME3339901_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K79me1;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-seq","DPY-27","Transcriptional Factor","Snyder, M.","2416","worm/SNYDER_ANTIGFP_DPY27_RECALL","TF binding sites","data set","Embryos","C. elegans","DPY-27;OP32;Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","DPY-27","Transcriptional Factor","Snyder, M.","2416","worm/Snyder_ANTIGFP_WIG_DPY27_COMB","TF binding sites","data set","Embryos","C. elegans","DPY-27;OP32;Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","LIN-11","Transcriptional Factor","Snyder, M.","2429","worm/SNYDER_ANTIGFP_LIN11_RECALL","TF binding sites","data set","Larvae L2 stage","C. elegans","LIN-11;OP62;Larvae L2 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","LIN-11","Transcriptional Factor","Snyder, M.","2429","worm/Snyder_ANTIGFP_WIG_LIN11_COMB","TF binding sites","data set","Larvae L2 stage","C. elegans","LIN-11;OP62;Larvae L2 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","UNC-130","Transcriptional Factor","Snyder, M.","2430","worm/Snyder_ANTIGFP_UNC130_RECALL","TF binding sites","data set","Fed L1 stage larvae","C. elegans","UNC-130;OP77;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","UNC-130","Transcriptional Factor","Snyder, M.","2430","worm/Snyder_ANTIGFP_WIG_UNC130_COMB","TF binding sites","data set","Fed L1 stage larvae","C. elegans","UNC-130;OP77;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","HLH-1","Transcriptional Factor","Snyder, M.","2431","worm/SNYDER_ANTIGFP_HLH1_RECALL","TF binding sites","data set","Embryos","C. elegans","HLH-1;OP64;Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","HLH-1","Transcriptional Factor","Snyder, M.","2431","worm/Snyder_ANTIGFP_WIG_COMB_HLH1_emb_GFP","TF binding sites","data set","Embryos","C. elegans","HLH-1;OP64;Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","LIN-39","Transcriptional Factor","Snyder, M.","2432","worm/SNYDER_ANTIGFP_LIN39_RECALL","TF binding sites","data set","Larvae L3 stage","C. elegans","LIN-39;OP18;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","LIN-39","Transcriptional Factor","Snyder, M.","2432","worm/Snyder_ANTIGFP_WIG_COMB_LIN39_L3_GFP","TF binding sites","data set","Larvae L3 stage","C. elegans","LIN-39;OP18;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","AMA-1","Transcriptional Factor","Snyder, M.","2435","worm/Snyder_N2_WIG_COMB/N2_POLII_eemb","TF binding sites","data set","Early Embryos","C. elegans","AMA-1;N2;Early Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","AMA-1","Transcriptional Factor","Snyder, M.","2436","worm/Snyder_N2_WIG_COMB/N2_POLII_lemb","TF binding sites","data set","Late Embryos 4.5 hrs post-early embryo","C. elegans","AMA-1;N2;Late Embryos 4.5 hrs post-early embryo;20 degree celsius;ChIP-seq"
"ChIP-seq","AMA-1","Transcriptional Factor","Snyder, M.","2437","worm/Snyder_N2_WIG_COMB/N2_POLII_L1","TF binding sites","data set","Fed L1 stage larvae","C. elegans","AMA-1;N2;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","AMA-1","Transcriptional Factor","Snyder, M.","2438","worm/Snyder_N2_WIG_COMB/N2_POLII_L2","TF binding sites","data set","Larvae L2 stage","C. elegans","AMA-1;N2;Larvae L2 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","AMA-1","Transcriptional Factor","Snyder, M.","2439","worm/Snyder_N2_WIG_COMB/N2_POLII_L3","TF binding sites","data set","Larvae L3 stage","C. elegans","AMA-1;N2;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","AMA-1","Transcriptional Factor","Snyder, M.","2440","worm/Snyder_N2_WIG_COMB/N2_POLII_L4","TF binding sites","data set","Larvae L4 stage","C. elegans","AMA-1;N2;Larvae L4 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","AMA-1","Transcriptional Factor","Snyder, M.","2441","worm/Snyder_N2_WIG_COMB/N2_POLII_YA","TF binding sites","data set","Young Adult","C. elegans","AMA-1;N2;Young Adult;20 degree celsius;ChIP-seq"
"ChIP-chip","H3K79me2","Histone Modification","Lieb, J.","2442","worm/LIEB_WIG_CHIPCHIP_H3K79/H3K79ME2346021_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K79me2;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K79me3","Histone Modification","Lieb, J.","2443","worm/LIEB_WIG_CHIPCHIP_H3K79/H3K79ME3361576_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K79me3;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K9me2","Histone Modification","Lieb, J.","2444","worm/LIEB_WIG_CHIPCHIP_H3K9/H3K9ME26D11_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K9me2;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","HCP-3","Chromatin Structure","Lieb, J.","2446","worm/LIEB_WIG_CHIPCHIP_CSP/HCP3_N2_MXEMB","Chromatin structure","data set","Mixed Embryos","C. elegans","HCP-3;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-seq","GEI-11","Transcriptional Factor","Snyder, M.","2451","worm/SNYDER_ANTIGFP_CHIPCHIP_GEI11/GEI11_L4_GFP","TF binding sites","data set","Larvae L4 stage","C. elegans","GEI-11;OP179;Larvae L4 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","GEI-11","Transcriptional Factor","Snyder, M.","2451","worm/SNYDER_ANTIGFP_GEI11_RECALL","TF binding sites","data set","Larvae L4 stage","C. elegans","GEI-11;OP179;Larvae L4 stage;20 degree celsius;ChIP-seq"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","2454","worm/PEMBRYO_FAX_WIG/L3-L4_hypodermis","RNA expression profiling","data set","L3-L4 22 hr 23dC 24 hr post-L1 stage larvae","C. elegans","total-RNA;NC1790;L3-L4 22 hr 23dC 24 hr post-L1 stage larvae;23 degree celsius;hypodermis (L3-L4);RNA-tiling-array"
"RACE","3-prime-UTR","mRNA","Piano, F.","2455","worm/L1.ws220.sam_sorted","Gene Structure","data set","L1 8 hr post-L1 stage larvae","C. elegans","3-prime-UTR;N2;L1 8 hr post-L1 stage larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2456","worm/L2.ws220.sam_sorted","Gene Structure","data set","L2 20 hr post-L1 stage larvae","C. elegans","3-prime-UTR;N2;L2 20 hr post-L1 stage larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2457","worm/L3.ws220.sam_sorted","Gene Structure","data set","L3 30 hr post-L1 stage larvae","C. elegans","3-prime-UTR;N2;L3 30 hr post-L1 stage larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2458","worm/L4.ws220.sam_sorted","Gene Structure","data set","L4 45 hr post-L1 stage larvae","C. elegans","3-prime-UTR;N2;L4 45 hr post-L1 stage larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2459","worm/YM_male.ws220.sam_sorted","Gene Structure","data set","Adult Males 70 hr post-L1 stage larvae","C. elegans","3-prime-UTR;him-8(e1489);Adult Males 70 hr post-L1 stage larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2460","worm/YA_herm.ws220.sam_sorted","Gene Structure","data set","Adult 70 hr post-L1 stage larvae","C. elegans","3-prime-UTR;N2;Adult 70 hr post-L1 stage larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2461","worm/L33daf02.ws220.sam_sorted","Gene Structure","data set","Dauer Larvae","C. elegans","3-prime-UTR;daf-2(e1370);Dauer Larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2462","worm/L33daf07.ws220.sam_sorted","Gene Structure","data set","Dauer Larvae","C. elegans","3-prime-UTR;daf-7(e1372);Dauer Larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2463","worm/L33daf09.ws220.sam_sorted","Gene Structure","data set","Dauer Larvae","C. elegans","3-prime-UTR;daf-9(m540);Dauer Larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2464","worm/L33daf11.ws220.sam_sorted","Gene Structure","data set","Dauer Larvae","C. elegans","3-prime-UTR;daf-11(m47);Dauer Larvae;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2465","worm/E.ws220.sam_sorted","Gene Structure","data set","Mixed Embryos","C. elegans","3-prime-UTR;N2;Mixed Embryos;20 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco2_A_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco1_V1_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco2_C_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco1_F_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco2_E_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco1_H_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco2_F_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco2_B_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco1_B_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco2_H_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco2_D_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco1_A_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco1_G_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco1_D_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco2_G_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco1_E_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2482","worm/marco1_C_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2484","worm/F_bowtie.map.sam.gz_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2484","worm/A_bowtie.map.sam.gz_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2484","worm/D_bowtie.map.sam.gz_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2484","worm/G_bowtie.map.sam.gz_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2484","worm/H_bowtie.map.sam.gz_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","2484","worm/C_bowtie.map.sam.gz_sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","2499","worm/EMBRYO_FAX_WIG/EMB_BAG","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;MT17370;Mixed stage of Embryos;25 degree celsius;BAG neurons (embryonic);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","2500","worm/EMBRYO_FAX_WIG/EMB_PVC","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;NC2015;Mixed stage of Embryos;25 degree celsius;PVC neurons (embryonic);RNA-tiling-array"
"DNA-tiling-array","His2Av","Chromatin Structure","Henikoff, S.","2502","fly/Henikoff_Salt_Ext_S2/600mM_pellet","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","His2Av;600 mM salt;precipitate;Fly biotin-tagged H2Av;time-point-1 – 2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","His2Av","Chromatin Structure","Henikoff, S.","2503","fly/Henikoff_Salt_Ext_S2/150mM_fraction","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","His2Av;150 mM salt;soluble fraction;Fly biotin-tagged H2Av;time-point-1-2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","His2Av","Chromatin Structure","Henikoff, S.","2504","fly/Henikoff_VARS","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","His2Av;15 mM salt;soluble fraction;Fly biotin-tagged H2Av;time-point-1-2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","His2A","Chromatin Structure","Henikoff, S.","2505","fly/Henikoff_VARS","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","His2A;15 mM salt;soluble fraction;Fly biotin-tagged H2A;time-point-1-2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","His2Av","Chromatin Structure","Henikoff, S.","2506","fly/HenikoffNUCL/Nucleosome_Density_S2","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","His2Av;15 mM salt;soluble fraction;Fly biotin-tagged H2Av;time-point-1-2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2507","fly/Henikoff_Salt_Ext_EMBRYO/150mM_fraction_Emb_1-3hr","Chromatin structure","data set","Embryonic stage 3 hr","D. melanogaster","Nucleosome;150 mM salt;soluble fraction;B3;time-point-1-2 hours;Embryonic stage 3 hr;DNA-tiling-array"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2508","fly/Henikoff_Salt_Ext_EMBRYO/600mM_fraction_Emb_1-3hr","Chromatin structure","data set","Embryonic stage 3 hr","D. melanogaster","Nucleosome;600 mM salt;soluble fraction;B3;time-point-1-2 hours;Embryonic stage 3 hr;DNA-tiling-array"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2509","fly/Henikoff_Salt_Ext_EMBRYO/600mM_pellet_Emb_1-3hr","Chromatin structure","data set","Embryonic stage 3 hr","D. melanogaster","Nucleosome;600 mM salt;precipitate;B3;time-point-1-2 hours;Embryonic stage 3 hr;DNA-tiling-array"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2510","fly/Henikoff_Salt_Ext_EMBRYO/150mM_fraction_Emb_4-6hr","Chromatin structure","data set","Extended germ band stage","D. melanogaster","Nucleosome;150 mM salt;soluble fraction;B3;time-point-1-2 hours;Extended germ band stage;DNA-tiling-array"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2511","fly/Henikoff_Salt_Ext_EMBRYO/600mM_fraction_Emb_4-6hr","Chromatin structure","data set","Extended germ band stage","D. melanogaster","Nucleosome;600 mM salt;soluble fraction;B3;time-point-1-2 hours;Extended germ band stage;DNA-tiling-array"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2512","fly/Henikoff_Salt_Ext_EMBRYO/600mM_Pellet_Emb_4-6hr","Chromatin structure","data set","Extended germ band stage","D. melanogaster","Nucleosome;600 mM salt;precipitate;B3;time-point-1-2 hours;Extended germ band stage;DNA-tiling-array"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2513","fly/Henikoff_Salt_Ext_WIG/80mM_fraction_wing_disc","Chromatin structure","data set","Larvae 3rd instar","D. melanogaster","Nucleosome;80 mM salt;soluble fraction;ML-DmD16-c3;time-point-1-2 hours;Larvae 3rd instar;dorsal mesothoracic disc;DNA-tiling-array"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2514","fly/Henikoff_Salt_Ext_WIG/150mM_fraction_wing_disc","Chromatin structure","data set","Larvae 3rd instar","D. melanogaster","Nucleosome;150 mM salt;soluble fraction;ML-DmD16-c3;time-point-1-2 hours;Larvae 3rd instar;dorsal mesothoracic disc;DNA-tiling-array"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2515","fly/Henikoff_Salt_Ext_WIG/600mM_fraction_wing_disc","Chromatin structure","data set","Larvae 3rd instar","D. melanogaster","Nucleosome;600 mM salt;soluble fraction;ML-DmD16-c3;time-point-1-2 hours;Larvae 3rd instar;dorsal mesothoracic disc;DNA-tiling-array"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2516","fly/Henikoff_Salt_Ext_WIG/600mM_pellet_wing_disc","Chromatin structure","data set","Larvae 3rd instar","D. melanogaster","Nucleosome;600 mM salt;precipitate;ML-DmD16-c3;time-point-1-2 hours;Larvae 3rd instar;dorsal mesothoracic disc;DNA-tiling-array"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2517","fly/Henikoff_Salt_Ext_S2/80mM_fraction_S2","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","Nucleosome;80 mM salt;soluble fraction;S2-DRSC;time-point-1 – 2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","His2A","Chromatin Structure","Henikoff, S.","2518","fly/Henikoff_Salt_Ext_HVARS/80mM_fraction_H2A","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","His2A;80 mM salt;soluble fraction;Fly biotin-tagged H2A;time-point-1 – 2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","His2Av","Chromatin Structure","Henikoff, S.","2519","fly/Henikoff_Salt_Ext_HVARS/80mM_fraction_H2Av","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","His2Av;80 mM salt;soluble fraction;Fly biotin-tagged H2Av;time-point-1 – 2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","His3.3A","Chromatin Structure","Henikoff, S.","2520","fly/Henikoff_Salt_Ext_HVARS/80mM_fraction_H3.3","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","His3.3A;80 mM salt;soluble fraction;Fly biotin-tagged H3.3;time-point-1 – 2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","His2Av","Chromatin Structure","Henikoff, S.","2521","fly/Henikoff_Salt_Ext_HVARS/80-150mM_fraction_H2Av","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","His2Av;80-150 mM salt;soluble fraction;Fly biotin-tagged H2Av;time-point-1.5 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2522","fly/Henikoff_Salt_Ext_S2/80-150mM_fraction_S2","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","Nucleosome;80-150 mM salt;soluble fraction;S2-DRSC;time-point-3 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","His3.3A","Chromatin Structure","Henikoff, S.","2523","fly/Henikoff_Salt_Ext_HVARS/80-600mM_fraction_H3.3","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","His3.3A;80-600 mM salt;soluble fraction;Fly biotin-tagged H3.3;time-point-1 – 2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","His2Av","Chromatin Structure","Henikoff, S.","2524","fly/Henikoff_Salt_Ext_HVARS/80-600mM_fraction_H2Av","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","His2Av;80-600 mM salt;soluble fraction;Fly biotin-tagged H2Av;time-point-1 – 2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","His2Av","Chromatin Structure","Henikoff, S.","2525","fly/Henikoff_Salt_Ext_HVARS/150-600mM_fraction_H2Av","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","His2Av;150-600 mM salt;soluble fraction;Fly biotin-tagged H2Av;time-point-1 – 2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","His3","Chromatin Structure","Henikoff, S.","2526","fly/Henikoff_Salt_Ext_HVARS/150-600mM_fraction_H3.3","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","His3;150-600 mM salt;soluble fraction;Fly biotin-tagged H3;time-point-1 – 2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2527","fly/Henikoff_Salt_Ext_S2/150-600mM_fraction_S2","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","Nucleosome;150-600 mM salt;soluble fraction;S2-DRSC;time-point-1 – 2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","His3.3A","Chromatin Structure","Henikoff, S.","2528","fly/HenikoffNUCL/Mononucleosomes_H3.3","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","His3.3A;15 mM salt;soluble fraction;Fly biotin-tagged H3.3;time-point-1 – 2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","His2Av","Chromatin Structure","Henikoff, S.","2529","fly/HenikoffNUCL/Mononucleosomes_H2Av","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","His2Av;15 mM salt;soluble fraction;Fly biotin-tagged H2Av;time-point-1 – 2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","HIS-72","Chromatin Structure","Henikoff, S.","2531","worm/Henikoff_Salt_Ext_VISTA/80mM_fraction","Chromatin structure","data set","Mixed Embryos","C. elegans","HIS-72;80 mM salt;soluble fraction;JJ2061;time-point-18 hours;Mixed Embryos;DNA-tiling-array"
"DNA-tiling-array","HIS-72","Chromatin Structure","Henikoff, S.","2532","worm/Henikoff_Salt_Ext_VISTA/600mM_fraction","Chromatin structure","data set","Mixed Embryos","C. elegans","HIS-72;600 mM salt;soluble fraction;JJ2061;time-point-2 hours;Mixed Embryos;DNA-tiling-array"
"DNA-tiling-array","HIS-72","Chromatin Structure","Henikoff, S.","2533","worm/Henikoff_Salt_Ext_VISTA/600mM_Pellet","Chromatin structure","data set","Mixed Embryos","C. elegans","HIS-72;600 mM salt;precipitate;JJ2061;time-point-18 hours;Mixed Embryos;DNA-tiling-array"
"DNA-tiling-array","HIS-72","Chromatin Structure","Henikoff, S.","2534","worm/Henikoff_Salt_H3_VISTA/80mM_fraction","Chromatin structure","data set","Mixed Embryos","C. elegans","HIS-72;80 mM salt;soluble fraction;JJ2061;time-point-2 hours;Mixed Embryos;DNA-tiling-array"
"DNA-tiling-array","HIS-72","Chromatin Structure","Henikoff, S.","2535","worm/Henikoff_Salt_H3_VISTA/350mM_fraction","Chromatin structure","data set","Mixed Embryos","C. elegans","HIS-72;350 mM salt;soluble fraction;JJ2061;time-point-1 - 4 hours;Mixed Embryos;DNA-tiling-array"
"DNA-tiling-array","HIS-72","Chromatin Structure","Henikoff, S.","2536","worm/Henikoff_Salt_H3_VISTA/600mM_fraction","Chromatin structure","data set","Mixed Embryos","C. elegans","HIS-72;600 mM salt;soluble fraction;JJ2061;time-point-18 hours;Mixed Embryos;DNA-tiling-array"
"DNA-tiling-array","HIS-72","Chromatin Structure","Henikoff, S.","2537","worm/HenikoffNUCL/Emb_Mononucleosomes","Chromatin structure","data set","Mixed Embryos","C. elegans","HIS-72;80 mM salt;soluble fraction;JJ2061;time-point-1 - 4 hours;Mixed Embryos;DNA-tiling-array"
"DNA-tiling-array","HIS-72","Chromatin Structure","Henikoff, S.","2538","worm/HenikoffNUCL/Adt_Mononucleosomes","Chromatin structure","data set","Young Adult","C. elegans","HIS-72;80 mM salt;soluble fraction;JJ2061;time-point-1 - 4 hours;Young Adult;DNA-tiling-array"
"RNA-seq","small-RNA","small RNA","Lai, E.","2543","fly/P0_GSM360260.sam.bam.sorted","RNA expression profiling","data set","Pupae 0-1 day","D. melanogaster","small-RNA;Canton S;Pupae 0-1 day;Whole organism;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2543","fly/Lai_RNASEQ_DUAL_PE/0-1day_pupae","RNA expression profiling","data set","Pupae 0-1 day","D. melanogaster","small-RNA;Canton S;Pupae 0-1 day;Whole organism;RNA-seq"
"CGH","Replication-Copy-Number","Copy Number Variation","MacAlpine, D.","2544","fly/MacAlpine_CGH_WIG/Follicle_OregonR-Orr-Weaver","Copy Number Variation","data set","Embryos 0-4 hr","D. melanogaster","Replication-Copy-Number;Embryos 0-4 hr;larval salivary gland;CGH"
"CGH","Replication-Copy-Number","Copy Number Variation","MacAlpine, D.","2545","fly/MacAlpine_CGH_WIG/Salivary_OregonR-Orr-Weaver","Copy Number Variation","data set","Embryos 0-4 hr","D. melanogaster","Replication-Copy-Number;Oregon-R Orr-Weaver;Embryos 0-4 hr;larval salivary gland;CGH"
"RNA-seq","small-RNA","small RNA","Lai, E.","2546","fly/Lai_RNASEQ_DUAL_PE/L1_2ndRep","RNA expression profiling","data set","Larvae 1st instar","D. melanogaster","small-RNA;Canton S;Larvae 1st instar;Whole organism;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2546","fly/L1_GSM360257.sam.bam.sorted","RNA expression profiling","data set","Larvae 1st instar","D. melanogaster","small-RNA;Canton S;Larvae 1st instar;Whole organism;RNA-seq"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","2548","worm/EMBRYO_FAX_WIG/EMB_PhM","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;NC1293;Mixed stage of Embryos;25 degree celsius;pharyngeal muscle;RNA-tiling-array"
"CAGE","5-prime-UTR","mRNA","Celniker, S.","2549","fly/Celniker_CAGE_Illumina","Gene Structure","data set","Mixed Embryos 0-24 hr","D. melanogaster","5-prime-UTR;Y cn bw sp;Mixed Embryos 0-24 hr;CAGE"
"CAGE","5-prime-UTR","mRNA","Celniker, S.","2549","fly/Dm_CAGE_HYB","Gene Structure","data set","Mixed Embryos 0-24 hr","D. melanogaster","5-prime-UTR;Y cn bw sp;Mixed Embryos 0-24 hr;CAGE"
"CNV-seq","Replication-Copy-Number","Copy Number Variation","MacAlpine, D.","2551","fly/MacAlpine_CNV/S2","Copy Number Variation","data set","Late Embryonic stage","D. melanogaster","Replication-Copy-Number;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;CNV-seq"
"CNV-seq","Replication-Copy-Number","Copy Number Variation","MacAlpine, D.","2552","fly/MacAlpine_CNV/Kc167","Copy Number Variation","data set","Late Embryonic stage","D. melanogaster","Replication-Copy-Number;Kc167;Late Embryonic stage;embryo-derived cell-line;CNV-seq"
"CNV-seq","Replication-Copy-Number","Copy Number Variation","MacAlpine, D.","2553","fly/MacAlpine_CNV/Bg3","Copy Number Variation","data set","Larvae 3rd instar","D. melanogaster","Replication-Copy-Number;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;CNV-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2554","fly/YAM2_GSM399107.sam.bam.sorted","RNA expression profiling","data set","Adult Male","D. melanogaster","small-RNA;Canton S;Adult Male;Male body;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2554","fly/Lai_RNASEQ_DUAL_T/Male_body_2ndRep","RNA expression profiling","data set","Adult Male","D. melanogaster","small-RNA;Canton S;Adult Male;Male body;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2555","fly/YAF2_GSM399106.sam.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Canton S;Adult Female;Female body;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2555","fly/Lai_RNASEQ_DUAL_T/Female_body_2ndRep","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Canton S;Adult Female;Female body;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2556","fly/P02_GSM360262.sam.bam.sorted","RNA expression profiling","data set","Pupae 0-2 day","D. melanogaster","small-RNA;Canton S;Pupae 0-2 day;Whole organism;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2556","fly/Lai_RNASEQ_DUAL_PE/0-2day_pupae","RNA expression profiling","data set","Pupae 0-2 day","D. melanogaster","small-RNA;Canton S;Pupae 0-2 day;Whole organism;RNA-seq"
"Mass-spec","total-RNA","mRNA","Waterston, R.","2557","worm/Waterston_MS_match","Gene Structure","data set","Mass spec","C. elegans","total-RNA;N2;Mass spec;20 degree celsius;Mass-spec"
"ChIP-chip","HDAC11","Non TF Chromatin binding factor","White, K.","2558","fly/White_CC_SG_CHROMISOL/HDAC11_494","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC11;Y cn bw sp;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","HDAC1","Non TF Chromatin binding factor","White, K.","2559","fly/White_CC_SG_CHROMISOL/HDAC1_500","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC1;Y cn bw sp;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","HDAC1","Non TF Chromatin binding factor","White, K.","2560","fly/White_CC_SG_CHROMISOL/HDAC1_501","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC1;Y cn bw sp;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","HDAC3","Non TF Chromatin binding factor","White, K.","2561","fly/White_CC_SG_CHROMISOL/HDAC3_498","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC3;Y cn bw sp;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","HDAC3","Non TF Chromatin binding factor","White, K.","2562","fly/White_CC_SG_CHROMISOL/HDAC3_499","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC3;Y cn bw sp;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","HDAC4a","Non TF Chromatin binding factor","White, K.","2563","fly/White_CC_SG_CHROMISOL/HDAC4a_492","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC4a;Y cn bw sp;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","HDAC4a","Non TF Chromatin binding factor","White, K.","2564","fly/White_CC_SG_CHROMISOL/HDAC4a_493","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC4a;Y cn bw sp;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","HDAC6","Non TF Chromatin binding factor","White, K.","2565","fly/White_CC_SG_CHROMISOL/HDAC6_496","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC6;Y cn bw sp;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","HDAC6","Non TF Chromatin binding factor","White, K.","2566","fly/White_CC_SG_CHROMISOL/HDAC6_497","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC6;Y cn bw sp;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","HDAC11","Non TF Chromatin binding factor","White, K.","2567","fly/White_CC_SG_CHROMISOL/HDAC11_495","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC11;Y cn bw sp;Embryos 0-12 hr;ChIP-chip"
"ChIP-chip","GAF","Transcriptional Factor","White, K.","2568","fly/White_CC_SG_TRITHORAX/Kc167_Trl","TF binding sites","data set","Late Embryonic stage","D. melanogaster","GAF;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Brakeless","Transcriptional Factor","White, K.","2569","fly/White_CC_SG_CNS/E-0-4h_bks","TF binding sites","data set","Embryos 0-4 hr","D. melanogaster","Brakeless;Embryos 0-4 hr;ChIP-chip"
"ChIP-chip","Caudal","Transcriptional Factor","White, K.","2570","fly/White_CC_SG_TRANSFACT/E0-4h_cad","TF binding sites","data set","Embryos 0-4 hr","D. melanogaster","Caudal;Embryos 0-4 hr;ChIP-chip"
"ChIP-chip","Dichaete","Transcriptional Factor","White, K.","2571","fly/White_CC_SG_CNS/E0-8_D","TF binding sites","data set","Embryos 0-8 hr","D. melanogaster","Dichaete;Embryos 0-8 hr;ChIP-chip"
"ChIP-chip","Disco","Transcriptional Factor","White, K.","2572","fly/White_CC_SG_PRONEUR/E0-8h_disco","TF binding sites","data set","Embryos 0-8 hr","D. melanogaster","Disco;Embryos 0-8 hr;ChIP-chip"
"ChIP-chip","GATAe","Transcriptional Factor","White, K.","2573","fly/White_CC_SG_TRANSFACT/E0-8h_GATAe","TF binding sites","data set","Embryos 0-8 hr","D. melanogaster","GATAe;Embryos 0-8 hr;ChIP-chip"
"ChIP-chip","Hairy","Transcriptional Factor","White, K.","2574","fly/White_CC_SG_TRANSFACT/E0-8h_h","TF binding sites","data set","Embryos 0-8 hr","D. melanogaster","Hairy;Embryos 0-8 hr;ChIP-chip"
"ChIP-chip","Huckebein","Transcriptional Factor","White, K.","2575","fly/White_CC_SG_GAP/E0-8h_hkb","TF binding sites","data set","Embryos 0-8 hr","D. melanogaster","Huckebein;Embryos 0-8 hr;ChIP-chip"
"ChIP-chip","Jumeau","Transcriptional Factor","White, K.","2576","fly/White_CC_SG_CNS/E0-8h_jumu","TF binding sites","data set","Embryos 0-8 hr","D. melanogaster","Jumeau;Embryos 0-8 hr;ChIP-chip"
"ChIP-chip","senseless","Transcriptional Factor","White, K.","2577","fly/White_CC_SG_PRONEUR/E4-8h_sens","TF binding sites","data set","Embryos 4-8 hr","D. melanogaster","senseless;Embryos 4-8 hr;ChIP-chip"
"ChIP-chip","Enhancer of zeste","Non TF Chromatin binding factor","White, K.","2585","fly/White_AGILENT_SG/ISO1_8-16_Ez","Other chromatin binding sites","data set","Embryos 8-16 hr","D. melanogaster","Enhancer of zeste;Embryos 8-16 hr;ChIP-chip"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2586","fly/S2_2586_hits.DCCheader.sam.gz.bam.sorted","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2587","worm/Hillier_confirmed_SL_ADHARP2_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;Harposporium;N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2587","worm/rainbow_genelet_ADHARP2_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;Harposporium;N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2587","worm/Hillier_confirmed_polyA_ADHARP2_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;Harposporium;N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2587","worm/Hillier_confirmed_introns_ADHARP2_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;Harposporium;N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2587","worm/rainbow_transcript_ADHARP2_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;Harposporium;N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2588","worm/Hillier_confirmed_introns_ADCONTR2_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;E. coli (OP50);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2588","worm/Hillier_confirmed_polyA_ADCONTR2_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;E. coli (OP50);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2588","worm/Hillier_confirmed_SL_ADCONTR2_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;E. coli (OP50);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2588","worm/rainbow_genelet_ADCONTR2_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;E. coli (OP50);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2588","worm/rainbow_transcript_ADCONTR2_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;E. coli (OP50);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2589","worm/Hillier_confirmed_SL_ADDB10EXP1_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;S. marcescens (Db11);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2589","worm/Hillier_confirmed_polyA_ADDB10EXP1_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;S. marcescens (Db11);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2589","worm/rainbow_genelet_ADDB10EXP1_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;S. marcescens (Db11);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2589","worm/Hillier_confirmed_introns_ADDB10EXP1_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;S. marcescens (Db11);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2589","worm/rainbow_transcript_ADDB10EXP1_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;S. marcescens (Db11);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2590","worm/rainbow_transcript_L4JK1107_NODNASE","Gene Structure","data set","Mid-L4 34.25 hrs post-L1 stage larvae","C. elegans","total-RNA;JK1107;Mid-L4 34.25 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2590","worm/Hillier_confirmed_introns_L4JK1107_NODNASE","Gene Structure","data set","Mid-L4 34.25 hrs post-L1 stage larvae","C. elegans","total-RNA;JK1107;Mid-L4 34.25 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2590","worm/rainbow_genelet_L4JK1107_NODNASE","Gene Structure","data set","Mid-L4 34.25 hrs post-L1 stage larvae","C. elegans","total-RNA;JK1107;Mid-L4 34.25 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2590","worm/Hillier_confirmed_SL_L4JK1107_NODNASE","Gene Structure","data set","Mid-L4 34.25 hrs post-L1 stage larvae","C. elegans","total-RNA;JK1107;Mid-L4 34.25 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2590","worm/Hillier_confirmed_polyA_L4JK1107_NODNASE","Gene Structure","data set","Mid-L4 34.25 hrs post-L1 stage larvae","C. elegans","total-RNA;JK1107;Mid-L4 34.25 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2591","worm/Hillier_confirmed_polyA_ADDB10CONR1_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;E. coli (OP50);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2591","worm/Hillier_confirmed_SL_ADDB10CONR1_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;E. coli (OP50);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2591","worm/Hillier_confirmed_introns_ADDB10CONR1_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;E. coli (OP50);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2591","worm/rainbow_genelet_ADDB10CONR1_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;E. coli (OP50);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2591","worm/rainbow_transcript_ADDB10CONR1_24HR","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;E. coli (OP50);N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2592","fly/CME_2592_hits.DCCheader.sam.gz.bam.sorted","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2593","fly/KC167_2593_hits.DCCheader.sam.gz.bam.sorted","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2594","fly/ML_2594_hits.DCCheader.sam.gz.bam.sorted","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;RNA-seq"
"ChIP-seq","HLH-8","Transcriptional Factor","Snyder, M.","2597","worm/Snyder_ANTIAMA_WIG_COMB_HLH8_POLII_L3","TF binding sites","data set","Larvae L3 stage","C. elegans","HLH-8;OP74;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","2598","worm/Snyder_PHA4_RECALL/PHA4_GFP_lemb","TF binding sites","data set","Late Embryos","C. elegans","PHA-4;OP37;Late Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","2598","worm/Snyder_PHA4_GFP_COMB/PHA4_GFP_lemb","TF binding sites","data set","Late Embryos","C. elegans","PHA-4;OP37;Late Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","MEP-1","Transcriptional Factor","Snyder, M.","2600","worm/Snyder_ANTIGFP_MEP1_RECALL","TF binding sites","data set","Embryos","C. elegans","MEP-1;OP70;Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","MEP-1","Transcriptional Factor","Snyder, M.","2600","worm/Snyder_ANTIGFP_WIG_COMB_MEP1_GFP_emb","TF binding sites","data set","Embryos","C. elegans","MEP-1;OP70;Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","MDL-1","Transcriptional Factor","Snyder, M.","2601","worm/Snyder_ANTIGFP_WIG_COMB_MDL1_GFP_L1","TF binding sites","data set","Fed L1 stage larvae","C. elegans","MDL-1;OP106;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","MDL-1","Transcriptional Factor","Snyder, M.","2601","worm/Snyder_ANTIGFP_MDL1_RECALL","TF binding sites","data set","Fed L1 stage larvae","C. elegans","MDL-1;OP106;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-chip","mod(mdg4)","Non TF Chromatin binding factor","White, K.","2602","fly/White_AGILENT_SG/ISO1_8-16_mod_mdg4","Other chromatin binding sites","data set","Embryos 8-16 hr","D. melanogaster","mod(mdg4);Embryos 8-16 hr;ChIP-chip"
"ChIP-chip","eve","Transcriptional Factor","White, K.","2603","fly/White_AGILENT_SG/R13_1-6-GFP_BC","TF binding sites","data set","Embryos 1-6 hr","D. melanogaster","eve;R13-YFP;Embryos 1-6 hr;ChIP-chip"
"ChIP-chip","H3K36me1","Histone Modification","Lieb, J.","2604","worm/LIEB_WIG_CHIPCHIP_H3K36/AB9048_H3K36ME1206009_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K36me1;Early Embryos;20 degree celsius;ChIP-chip"
"RNA-seq","small-RNA","small RNA","Lai, E.","2605","fly/OSS.sam.bam.sorted","RNA expression profiling","data set","Adult stage","D. melanogaster","small-RNA;OvarySomaticSheet;Adult stage;ovary;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2605","fly/Lai_RNASEQ_DUAL_CELLS/OSS","RNA expression profiling","data set","Adult stage","D. melanogaster","small-RNA;OvarySomaticSheet;Adult stage;ovary;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2606","fly/Lai_RNASEQ_DUAL_CELLS/Kc167_2rep","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2606","fly/KC_Lai_Kc167_2rep.sam.bam.sorted","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2608","fly/S2RPlus_2rep.sam.bam.sorted","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2R+;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2608","fly/Lai_RNASEQ_DUAL_CELLS/S2Rplus_2rep","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2R+;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"ChIP-seq","LIN-15B","Transcriptional Factor","Snyder, M.","2610","worm/SNYDER_ANTIGFP_CHIPCHIP_LIN15B/LIN15B_GFP_L3","TF binding sites","data set","Larvae L3 stage","C. elegans","LIN-15B;OP184;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","LIN-15B","Transcriptional Factor","Snyder, M.","2610","worm/SNYDER_ANTIGFP_LIN15B_RECALL","TF binding sites","data set","Larvae L3 stage","C. elegans","LIN-15B;OP184;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","BLMP-1","Transcriptional Factor","Snyder, M.","2612","worm/Snyder_ANTIGFP_WIG_COMB_BLMP1_GFP_L1","TF binding sites","data set","Fed L1 stage larvae","C. elegans","BLMP-1;OP109;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","LIN-13","Transcriptional Factor","Snyder, M.","2613","worm/Snyder_ANTIGFP_WIG_COMB_LIN13_GFP_emb","TF binding sites","data set","Embryos","C. elegans","LIN-13;OP51;Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","LIN-13","Transcriptional Factor","Snyder, M.","2613","worm/Snyder_ANTIGFP_LIN13_RECALL","TF binding sites","data set","Embryos","C. elegans","LIN-13;OP51;Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","ELT-3","Transcriptional Factor","Snyder, M.","2614","worm/SNYDER_ANTIGFP_ELT3_RECALL","TF binding sites","data set","Fed L1 stage larvae","C. elegans","ELT-3;OP75;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","ELT-3","Transcriptional Factor","Snyder, M.","2614","worm/Snyder_ANTIGFP_WIG_COMB_ELT3_GFP_L1","TF binding sites","data set","Fed L1 stage larvae","C. elegans","ELT-3;OP75;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","CEH-30","Transcriptional Factor","Snyder, M.","2620","worm/Snyder_ANTIGFP_WIG_COMB_CEH30_GFP_lemb","TF binding sites","data set","Late Embryos","C. elegans","CEH-30;OP120;Late Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","CEH-30","Transcriptional Factor","Snyder, M.","2620","worm/SNYDER_ANTIGFP_CEH30_RECALL","TF binding sites","data set","Late Embryos","C. elegans","CEH-30;OP120;Late Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","EGL-27","Transcriptional Factor","Snyder, M.","2621","worm/Snyder_ANTIGFP_EGL27_RECALL","TF binding sites","data set","Fed L1 stage larvae","C. elegans","EGL-27;OP177;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","EGL-27","Transcriptional Factor","Snyder, M.","2621","worm/Snyder_ANTIGFP_WIG_COMB_EGL27_GFP_L1","TF binding sites","data set","Fed L1 stage larvae","C. elegans","EGL-27;OP177;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","SKN-1","Transcriptional Factor","Snyder, M.","2622","worm/Snyder_ANTIGFP_WIG_COMB_SKN1_GFP_L1","TF binding sites","data set","Fed L1 stage larvae","C. elegans","SKN-1;OP178;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","SKN-1","Transcriptional Factor","Snyder, M.","2622","worm/Snyder_ANTIGFP_COMB_SKN1_RECALL","TF binding sites","data set","Fed L1 stage larvae","C. elegans","SKN-1;OP178;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","PQM-1","Transcriptional Factor","Snyder, M.","2623","worm/Snyder_ANTIGFP_WIG_COMB_PQM1_GFP_L3","TF binding sites","data set","Larvae L3 stage","C. elegans","PQM-1;OP201;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","PQM-1","Transcriptional Factor","Snyder, M.","2623","worm/Snyder_ANTIGFP_PQM1_RECALL","TF binding sites","data set","Larvae L3 stage","C. elegans","PQM-1;OP201;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","Caudal","Transcriptional Factor","White, K.","2625","fly/White_CS_SG_GAP/A-Female_7T","TF binding sites","data set","Adult Female","D. melanogaster","Caudal;7T-CAD;Adult Female;ChIP-seq"
"ChIP-seq","Caudal","Transcriptional Factor","White, K.","2626","fly/White_CS_SG_GAP/E0-4h_7T","TF binding sites","data set","Embryos 0-4 hr","D. melanogaster","Caudal;7T-CAD;Embryos 0-4 hr;ChIP-seq"
"ChIP-seq","HDAC4a","Non TF Chromatin binding factor","White, K.","2627","fly/White_CS_SG_CHROMISOL/HDAC-492","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC4a;Y cn bw sp;Embryos 0-12 hr;ChIP-seq"
"ChIP-seq","HDAC4a","Non TF Chromatin binding factor","White, K.","2628","fly/White_CS_SG_CHROMISOL/HDAC-493","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC4a;Y cn bw sp;Embryos 0-12 hr;ChIP-seq"
"ChIP-seq","HDAC11","Non TF Chromatin binding factor","White, K.","2629","fly/White_CS_SG_CHROMISOL/HDAC-494","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC11;Y cn bw sp;Embryos 0-12 hr;ChIP-seq"
"ChIP-seq","HDAC11","Non TF Chromatin binding factor","White, K.","2630","fly/White_CS_SG_CHROMISOL/HDAC-495","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC11;Y cn bw sp;Embryos 0-12 hr;ChIP-seq"
"ChIP-seq","HDAC6","Non TF Chromatin binding factor","White, K.","2631","fly/White_CS_SG_CHROMISOL/HDAC-496","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC6;Y cn bw sp;Embryos 0-12 hr;ChIP-seq"
"ChIP-seq","HDAC6","Non TF Chromatin binding factor","White, K.","2632","fly/White_CS_SG_CHROMISOL/HDAC-497","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC6;Y cn bw sp;Embryos 0-12 hr;ChIP-seq"
"ChIP-seq","HDAC3","Non TF Chromatin binding factor","White, K.","2633","fly/White_CS_SG_CHROMISOL/HDAC-498","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC3;Y cn bw sp;Embryos 0-12 hr;ChIP-seq"
"ChIP-seq","HDAC3","Non TF Chromatin binding factor","White, K.","2634","fly/White_CS_SG_CHROMISOL/HDAC-499","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC3;Y cn bw sp;Embryos 0-12 hr;ChIP-seq"
"ChIP-seq","HDAC1","Non TF Chromatin binding factor","White, K.","2635","fly/White_CS_SG_CHROMISOL/HDAC-500","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC1;Y cn bw sp;Embryos 0-12 hr;ChIP-seq"
"ChIP-seq","HDAC1","Non TF Chromatin binding factor","White, K.","2636","fly/White_CS_SG_CHROMISOL/HDAC-501","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","HDAC1;Y cn bw sp;Embryos 0-12 hr;ChIP-seq"
"ChIP-seq","Caudal","Transcriptional Factor","White, K.","2637","fly/White_CS_SG_GAP/E4-8h_7T","TF binding sites","data set","Embryos 4-8 hr","D. melanogaster","Caudal;7T-CAD;Embryos 4-8 hr;ChIP-seq"
"ChIP-seq","CTCF","Non TF Chromatin binding factor","White, K.","2638","fly/White_INSULATORS_WIG_CS/S2_CTCF200","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","CTCF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-seq"
"ChIP-seq","CTCF","Non TF Chromatin binding factor","White, K.","2639","fly/White_INSULATORS_WIG_CS/S2_CTCF500","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","CTCF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-seq"
"ChIP-seq","EcR","Transcriptional Factor","White, K.","2640","fly/White_ECR_SG_CS/W3L_EcRGFP","TF binding sites","data set","Larvae L3 stage","D. melanogaster","EcR;EcR-GFP;Larvae L3 stage;ChIP-seq"
"ChIP-seq","EcR","Transcriptional Factor","White, K.","2641","fly/White_ECR_SG_CS/WPP","TF binding sites","data set","Pupae, White prepupae (WPP) 10-11 hr","D. melanogaster","EcR;EcR-GFP;Pupae, White prepupae (WPP) 10-11 hr;ChIP-seq"
"ChIP-seq","EcR","Transcriptional Factor","White, K.","2642","fly/White_ECR_SG_CS/WPP30-33","TF binding sites","data set","White prepupae (WPP) 30-33 hr","D. melanogaster","EcR;EcR-GFP;White prepupae (WPP) 30-33 hr;ChIP-seq"
"ChIP-chip","H3K9me1","Histone Modification","Lieb, J.","2646","worm/LIEB_WIG_CHIPCHIP_H3K9/AB9045_H3K9ME1291918_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K9me1;Early Embryos;20 degree celsius;ChIP-chip"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2647","worm/EXONS_W2647","Gene Structure","data set","All stages","C. elegans","total-RNA;All stages;RNA-seq"
"ChIP-chip","Chriz","Non TF Chromatin binding factor","Karpen, G.","2648","fly/KARPEN_CHIPCHIP_CHROMPROT_OR/CHRIZ_BR_14_16h_OR_emb","Other chromatin binding sites","data set","Embryos 14-16 hr OR","D. melanogaster","Chriz;Oregon-R;Embryos 14-16 hr OR;ChIP-chip"
"ChIP-chip","Ez","Non TF Chromatin binding factor","Karpen, G.","2650","fly/KARPEN_CHIPCHIP_HISMODENZ_BG3/Ez_BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","Ez;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","GAF","Non TF Chromatin binding factor","Karpen, G.","2651","fly/KARPEN_CHIPCHIP_INS_BG3/GAF_BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","GAF;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K18ac","Histone Modification","Karpen, G.","2652","fly/KARPEN_CHIPCHIP_HISMODS_H3_OR/H3K18Ac_new_2_4h_OR_emb","Histone modification and replacement","data set","Embryos 2-4 hr OR","D. melanogaster","H3K18ac;Oregon-R;Embryos 2-4 hr OR;ChIP-chip"
"ChIP-chip","H3K4me1","Histone Modification","Karpen, G.","2653","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K4Me1_BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K4me1;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K4me2","Histone Modification","Karpen, G.","2654","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K4Me2_Millipore_BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K4me2;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K4me2","Histone Modification","Karpen, G.","2655","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K4Me2_Millipore_S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K4me2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K4me2","Histone Modification","Karpen, G.","2656","fly/KARPEN_CHIPCHIP_HISMODS_H3_OR/H3K4Me2_14_16h_OR_emb","Histone modification and replacement","data set","Embryos 14-16 hr OR","D. melanogaster","H3K4me2;Oregon-R;Embryos 14-16 hr OR;ChIP-chip"
"ChIP-chip","H3K4me2","Histone Modification","Karpen, G.","2657","fly/KARPEN_CHIPCHIP_HISMODS_H3_L3/H3K4Me2_L3nuc","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K4me2;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","H3K79me1","Histone Modification","Karpen, G.","2658","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K79Me1_S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K79me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9acS10P","Histone Modification","Karpen, G.","2659","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K9AcS10P_new_BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K9acS10P;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9acS10P","Histone Modification","Karpen, G.","2660","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K9AcS0P_1new_S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K9acS10P;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9me2","Histone Modification","Karpen, G.","2661","fly/KARPEN_CHIPCHIP_HISMODS_H3_OR/H3K9Me2_Ab2_new_14_16h_OR_emb","Histone modification and replacement","data set","Embryos 14-16 hr OR","D. melanogaster","H3K9me2;Oregon-R;Embryos 14-16 hr OR;ChIP-chip"
"ChIP-chip","H3K9me2","Histone Modification","Karpen, G.","2662","fly/KARPEN_CHIPCHIP_HISMODS_H3_OR/H3K9Me2_Ab2_new_2_4h_OR_emb","Histone modification and replacement","data set","Embryos 2-4 hr OR","D. melanogaster","H3K9me2;Oregon-R;Embryos 2-4 hr OR;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","Karpen, G.","2663","fly/KARPEN_CHIPCHIP_HISMODS_H3_OR/H3K9Me3_new_14_16h_OR_emb","Histone modification and replacement","data set","Embryos 14-16 hr OR","D. melanogaster","H3K9me3;Oregon-R;Embryos 14-16 hr OR;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","Karpen, G.","2664","fly/KARPEN_CHIPCHIP_HISMODS_H3_OR/H3K9Me3_new_OR_HEADnuc","Histone modification and replacement","data set","Mixed Adult","D. melanogaster","H3K9me3;Oregon-R;Mixed Adult;Heads OR;ChIP-chip"
"ChIP-chip","HP1a","Non TF Chromatin binding factor","Karpen, G.","2665","fly/KARPEN_CHIPCHIP_CHROMPROT_OR/HP1_wa191_2_4h_OR_emb","Other chromatin binding sites","data set","Embryos 2-4 hr OR","D. melanogaster","HP1a;Oregon-R;Embryos 2-4 hr OR;ChIP-chip"
"ChIP-chip","HP1a","Non TF Chromatin binding factor","Karpen, G.","2666","fly/KARPEN_CHIPCHIP_CHRPROT_BG3/HP1_wa191_BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","HP1a;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","HP1a","Non TF Chromatin binding factor","Karpen, G.","2667","fly/KARPEN_CHIPCHIP_CHROMPROT_CL8/HP1_wa191_Cl8","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","HP1a;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","HP1a","Non TF Chromatin binding factor","Karpen, G.","2668","fly/KARPEN_CHIPCHIP_CHRPROT_S2/HP1a_wa184_S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","HP1a;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","HP1c","Non TF Chromatin binding factor","Karpen, G.","2669","fly/KARPEN_CHIPCHIP_CHROMPROT_CL8/HP1c_MO_462_Cl8","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","HP1c;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","HP1c","Non TF Chromatin binding factor","Karpen, G.","2670","fly/KARPEN_CHIPCHIP_CHRPROT_KC/HP1c_MO_462_Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","HP1c;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Su(var)3-7","Non TF Chromatin binding factor","Karpen, G.","2671","fly/KARPEN_CHIPCHIP_HISMODENZ_BG3/Su_var3_7_Q3448_BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","Su(var)3-7;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","Su(var)3-7","Non TF Chromatin binding factor","Karpen, G.","2672","fly/KARPEN_CHIPCHIP_HISMODENZ_S2/Su_var3_7_Q3448_S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Su(var)3-7;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Su(var)3-9","Non TF Chromatin binding factor","Karpen, G.","2673","fly/KARPEN_CHIPCHIP_HISMODENZ_S2/Su_var3_9_S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Su(var)3-9;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","mod(mdg4)","Non TF Chromatin binding factor","Karpen, G.","2674","fly/KARPEN_CHIPCHIP_INS_S2/mod2_2_VC_S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","mod(mdg4);S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"integrated-gene-model","transcript","mRNA","Celniker, S.","2675","fly/MB8","Gene Structure","data set","All stages","D. melanogaster","transcript;All stages;integrated-gene-model"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2676","fly/Dm_SOLiD_WIG/embryo_0-2hr","Gene Structure","data set","Embryos 0-2 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 0-2 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2677","fly/Dm_SOLiD_WIG/embryo_2-4hr","Gene Structure","data set","Embryos 2-4 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 2-4 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2678","fly/Dm_SOLiD_WIG/embryo_4-6hr","Gene Structure","data set","Embryos 4-6 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 4-6 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2679","fly/Dm_SOLiD_WIG/embryo_6-8hr","Gene Structure","data set","Embryos 6-8 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 6-8 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2680","fly/Dm_SOLiD_WIG/embryo_8-10hr","Gene Structure","data set","Embryos 8-10 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 8-10 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2681","fly/Dm_SOLiD_WIG/embryo_10-12hr","Gene Structure","data set","Embryos 10-12 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 10-12 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2682","fly/Dm_SOLiD_WIG/embryo_12-14hr","Gene Structure","data set","Embryos 12-14 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 12-14 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2683","fly/Dm_SOLiD_WIG/embryo_14-16hr","Gene Structure","data set","Embryos 14-16 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 14-16 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2684","fly/Dm_SOLiD_WIG/embryo_16-18hr","Gene Structure","data set","Embryos 16-18 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 16-18 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2685","fly/Dm_SOLiD_WIG/embryo_18-20hr","Gene Structure","data set","Embryos 18-20 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 18-20 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2686","fly/Dm_SOLiD_WIG/embryo_20-22hr","Gene Structure","data set","Embryos 20-22 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 20-22 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2687","fly/Dm_SOLiD_WIG/embryo_22-24hr","Gene Structure","data set","Embryos 22-24 hrSC","D. melanogaster","total-RNA;Y cn bw sp;Embryos 22-24 hrSC;RNA-seq"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2688","fly/Transcript_regions_2688","Gene Structure","data set","Embryos 0-2 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 0-2 hr;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2689","fly/Transcript_regions_2689","Gene Structure","data set","Embryos 2-4 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 2-4 hr;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2690","fly/Transcript_regions_2690","Gene Structure","data set","Embryos 4-6 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 4-6 hr;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2691","fly/Transcript_regions_2691","Gene Structure","data set","Embryos 6-8 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 6-8 hr;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2692","fly/Transcript_regions_2692","Gene Structure","data set","Embryos 8-10 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 8-10 hr;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2693","fly/Transcript_regions_2693","Gene Structure","data set","Embryos 10-12 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 10-12 hr;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2694","fly/Transcript_regions_2694","Gene Structure","data set","Embryos 12-14 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 12-14 hr;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2695","fly/Transcript_regions_2695","Gene Structure","data set","Embryos 14-16 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 14-16 hr;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2696","fly/Transcript_regions_2696","Gene Structure","data set","Embryos 16-18 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 16-18 hr;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2697","fly/Transcript_regions_2697","Gene Structure","data set","Embryos 18-20 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 18-20 hr;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2698","fly/Transcript_regions_2698","Gene Structure","data set","Embryos 20-22 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 20-22 hr;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2699","fly/Transcript_regions_2699","Gene Structure","data set","Embryos 22-24 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 22-24 hr;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2700","fly/Transcript_regions_2700","Gene Structure","data set","Larvae L1 stage","D. melanogaster","total-RNA;Y cn bw sp;Larvae L1 stage;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2701","fly/Transcript_regions_2701","Gene Structure","data set","Larvae L2 stage","D. melanogaster","total-RNA;Y cn bw sp;Larvae L2 stage;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2702","fly/Transcript_regions_2702","Gene Structure","data set","L3 stage, 12 hr post-molt stage larvae","D. melanogaster","total-RNA;Y cn bw sp;L3 stage, 12 hr post-molt stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2703","fly/Transcript_regions_2703","Gene Structure","data set","L3 stage, dark blue gut(1-2) stage larvae","D. melanogaster","total-RNA;Y cn bw sp;L3 stage, dark blue gut(1-2) stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2704","fly/Transcript_regions_2704","Gene Structure","data set","L3 stage, light blue gut(3-6) stage larvae","D. melanogaster","total-RNA;Y cn bw sp;L3 stage, light blue gut(3-6) stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2705","fly/Transcript_regions_2705","Gene Structure","data set","L3 stage, clear gut PS(7-9) stage larvae","D. melanogaster","total-RNA;Y cn bw sp;L3 stage, clear gut PS(7-9) stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2706","fly/Transcript_regions_2706","Gene Structure","data set","White prepupae (WPP)","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP);integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2707","fly/Transcript_regions_2707","Gene Structure","data set","White prepupae (WPP) + 12 hr","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP) + 12 hr;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2708","fly/Transcript_regions_2708","Gene Structure","data set","White prepupae (WPP) + 24 hr","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP) + 24 hr;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2709","fly/Transcript_regions_2709","Gene Structure","data set","White prepupae (WPP) + 2 days","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP) + 2 days;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2710","fly/Transcript_regions_2710","Gene Structure","data set","White prepupae (WPP) + 3 days","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP) + 3 days;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2711","fly/Transcript_regions_2711","Gene Structure","data set","White prepupae (WPP) + 4 days","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP) + 4 days;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2712","fly/Transcript_regions_2712","Gene Structure","data set","Adult Female, eclosion + 1 day","D. melanogaster","total-RNA;Y cn bw sp;Adult Female, eclosion + 1 day;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2713","fly/Transcript_regions_2713","Gene Structure","data set","Adult Male, eclosion + 1 day","D. melanogaster","total-RNA;Y cn bw sp;Adult Male, eclosion + 1 day;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2714","fly/Transcript_regions_2714","Gene Structure","data set","Adult Female, eclosion + 5 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Female, eclosion + 5 days;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2715","fly/Transcript_regions_2715","Gene Structure","data set","Adult Male, eclosion + 5 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Male, eclosion + 5 days;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2716","fly/Transcript_regions_2716","Gene Structure","data set","Adult Female, eclosion + 30 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Female, eclosion + 30 days;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2717","fly/Transcript_regions_2717","Gene Structure","data set","Adult Male, eclosion + 30 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Male, eclosion + 30 days;integrated-gene-model"
"RT-PCR","total-RNA","mRNA","Waterston, R.","2718","worm/Waterston_intron_all","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;TGTGTAATGGAACTCCGAGAGTATTGTC;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","2718","worm/Waterston_EST_match_all/IntronsChrI","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;TGTGTAATGGAACTCCGAGAGTATTGTC;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","2718","worm/Waterston_match_part_5252_2718","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;TGTGTAATGGAACTCCGAGAGTATTGTC;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RT-PCR","total-RNA","mRNA","Waterston, R.","2718","worm/Waterston_intron_5252_2718","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;TGTGTAATGGAACTCCGAGAGTATTGTC;N2;Mixed Larval Stages Grown 4-5 Days;RT-PCR"
"RACE","total-RNA","mRNA","Waterston, R.","2720","worm/Waterston_EST_match_all/SL_Acceptor_Site","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;GAGAGCTATTCCAATTTTTATCCGCA;N2;Mixed Larval Stages Grown 4-5 Days;RACE"
"RACE","total-RNA","mRNA","Waterston, R.","2720","worm/Waterston_match_part_5277_2720","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;GAGAGCTATTCCAATTTTTATCCGCA;N2;Mixed Larval Stages Grown 4-5 Days;RACE"
"RACE","total-RNA","mRNA","Waterston, R.","2720","worm/SL_Acceptor_site_W2720","Gene Structure","data set","Mixed Larval Stages Grown 4-5 Days","C. elegans","total-RNA;GAGAGCTATTCCAATTTTTATCCGCA;N2;Mixed Larval Stages Grown 4-5 Days;RACE"
"RNA-seq","small-RNA","small RNA","Lai, E.","2721","fly/CMEW1_Cl_8.sam.bam.sorted","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2721","fly/Lai_RNASEQ_DUAL_CELLS/CMEW1_Cl_8","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2725","fly/S2_GSM361908.sam.bam.sorted","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2725","fly/Lai_RNASEQ_DUAL_CELLS/S2_Rubin","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"ChIP-chip","H3K4me1","Histone Modification","Lieb, J.","2726","worm/LIEB_WIG_CHIPCHIP_H3K4/AB8895_H3K4ME1733246_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K4me1;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","LEM-2","Non TF Chromatin binding factor","Lieb, J.","2729","worm/LIEB_WIG_CHROMNUC_ENV/SDQ3891_LEM2_N2_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","LEM-2;Mixed Embryos;20 degree celsius;ChIP-chip"
"RNA-seq","small-RNA","small RNA","Waterston, R.","2730","worm/YA_spe9day0_merged_ws220.soap.sam.bam.sorted","Gene Structure","data set","Young adult DAY0post-L4 molt stage larvae","C. elegans","small-RNA;spe-9(hc88);Young adult DAY0post-L4 molt stage larvae;23 degree celsius;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","2732","worm/YA_spe9day5_s_2.S3_ws220.soap.sam.bam.sorted","Gene Structure","data set","Adult 5 days post-L4 stage larvae","C. elegans","small-RNA;spe-9(hc88);Adult 5 days post-L4 stage larvae;23 degree celsius;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","2733","worm/YA_spe9day8_merged_ws220.soap.sam.bam.sorted","Gene Structure","data set","Adult spe-9(hc88) 8 days post-L4 molt stage larvae","C. elegans","small-RNA;spe-9(hc88);Adult spe-9(hc88) 8 days post-L4 molt stage larvae;23 degree celsius;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","2734","worm/YA_spe9day12_s_5.S3_ws220.soap.sam_sorted","Gene Structure","data set","Adult 12 days post-L4 stage larvae","C. elegans","small-RNA;spe-9(hc88);Adult 12 days post-L4 stage larvae;23 degree celsius;RNA-seq"
"ChIP-chip","NPP-13","Non TF Chromatin binding factor","Lieb, J.","2738","worm/LIEB_WIG_CHROMNUC_ENV/SDQ3897_NPP13_N2_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","NPP-13;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K9me1","Histone Modification","Lieb, J.","2739","worm/LIEB_WIG_CHIPCHIP_H3K9/AB8896_H3K9ME1104560_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K9me1;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","Lieb, J.","2740","worm/LIEB_WIG_CHIPCHIP_H3K27/AB4729_H3K27AC361571_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K27ac;Early Embryos;20 degree celsius;ChIP-chip"
"RNA-seq","small-RNA","small RNA","Lai, E.","2741","fly/E12_GSM364902.sam.bam.sorted","RNA expression profiling","data set","Embryos 12-24 hr","D. melanogaster","small-RNA;Canton S;Embryos 12-24 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2741","fly/Lai_RNASEQ_DUAL_E/12-24hr_embryo_CantonS","RNA expression profiling","data set","Embryos 12-24 hr","D. melanogaster","small-RNA;Canton S;Embryos 12-24 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2742","fly/E12_V082.sam.gz.bam.sorted","RNA expression profiling","data set","Embryos 14-16 hr","D. melanogaster","small-RNA;Y cn bw sp;Embryos 14-16 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2742","fly/Lai_RNASEQ_DUAL_E/12-24hr_embryo_BS61-64-67-73","RNA expression profiling","data set","Embryos 14-16 hr","D. melanogaster","small-RNA;Y cn bw sp;Embryos 14-16 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2743","fly/Lai_RNASEQ_DUAL_E/2-6hr_embryo_BS43-46","RNA expression profiling","data set","Embryos 2-4 hr","D. melanogaster","small-RNA;Y cn bw sp;Embryos 2-4 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2743","fly/E02_V081.sam.gz.bam.sorted","RNA expression profiling","data set","Embryos 2-4 hr","D. melanogaster","small-RNA;Y cn bw sp;Embryos 2-4 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2744","fly/Lai_RNASEQ_DUAL_ENR_T/CantonS_ovaries_Ago1IP","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Canton S;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2744","fly/O_V063.sam.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Canton S;Adult Female;Adult ovaries;RNA-seq"
"integrated-gene-model","3-prime-UTR","mRNA","Piano, F.","2745","worm/UTRome_V2_3_three_prime_UTR_6102_2745","Gene Structure","data set","All stages","C. elegans","3-prime-UTR;All stages;integrated-gene-model"
"integrated-gene-model","3-prime-UTR","mRNA","Piano, F.","2745","worm/UTRome_V2_3_polyA_signal_sequence_6102_2745","Gene Structure","data set","All stages","C. elegans","3-prime-UTR;All stages;integrated-gene-model"
"integrated-gene-model","3-prime-UTR","mRNA","Piano, F.","2745","worm/UTRome_V2_3_polyA_site_6102_2745","Gene Structure","data set","All stages","C. elegans","3-prime-UTR;All stages;integrated-gene-model"
"RNA-seq","small-RNA","small RNA","Lai, E.","2746","fly/Lai_RNASEQ_DUAL_ENR_T/Ago2-414_ovaries_Ago1IP","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Ago2 414;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2746","fly/O_V064.sam.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Ago2 414;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2748","fly/Lai_RNASEQ_DUAL_T/r2d2_ovaries","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;r2d2 1;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2748","fly/R2_V088.sam.gz.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;r2d2 1;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2749","fly/R2O_V066.sam.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;r2d2 1;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2749","fly/Lai_RNASEQ_DUAL_ENR_T/r2d2_ovaries_Ago1IP","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;r2d2 1;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2751","fly/YAM_V090.sam.bam.sorted","RNA expression profiling","data set","Adult Male","D. melanogaster","small-RNA;Canton S;Adult Male;Male body;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2751","fly/Lai_RNASEQ_DUAL_T/CantonS_Male_body","RNA expression profiling","data set","Adult Male","D. melanogaster","small-RNA;Canton S;Adult Male;Male body;RNA-seq"
"ChIP-seq","ORC2","DNA Replication","MacAlpine, D.","2753","fly/MacAlpine_ORC_CHIPSEQ_COMB/S2_dOrc2","Replication","data set","Late Embryonic stage","D. melanogaster","ORC2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-seq"
"ChIP-seq","ORC2","DNA Replication","MacAlpine, D.","2754","fly/MacAlpine_ORC_CHIPSEQ_COMB/BG3_dOrc2","Replication","data set","Larvae 3rd instar","D. melanogaster","ORC2;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-seq"
"ChIP-seq","ORC2","DNA Replication","MacAlpine, D.","2755","fly/MacAlpine_ORC_CHIPSEQ_COMB/Kc167_dOrc2","Replication","data set","Late Embryonic stage","D. melanogaster","ORC2;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-seq"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2756","fly/Henikoff_Salt_Ext_Kc/Kc_600_mM_Salt_Extracted_Chromatin","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","Nucleosome;600 mM salt;soluble fraction;Kc167;time-point-1 to 2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2757","fly/Henikoff_Salt_Ext_Kc/Kc_600_mM_Salt_Extracted_Chromatin_Pellet","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","Nucleosome;600 mM salt;precipitate;Kc167;time-point-1 to 2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"RNA-tiling-array","PolyA-RNA","mRNA","Henikoff, S.","2758","fly/Henikoff_Salt_Ext_TA/Kc_RNA_Expression_Tiling_Array","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","PolyA-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2759","fly/Henikoff_Salt_Ext_Kc/Kc_H2Av_Knockdown_600_mM_Salt_Extracted_Chromatin","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","Nucleosome;600 mM salt;soluble fraction;Kc167;time-point-1 to 2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"DNA-tiling-array","Nucleosome","Chromatin Structure","Henikoff, S.","2760","fly/Henikoff_Salt_Ext_Kc/Kc_H2Av_Knockdown_600_mM_Salt_Extracted_Chromatin_Pellet","Chromatin structure","data set","Late Embryonic stage","D. melanogaster","Nucleosome;600 mM salt;precipitate;Kc167;time-point-1 to 2 hours;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array"
"RNA-tiling-array","PolyA-RNA","mRNA","Henikoff, S.","2761","fly/Henikoff_Salt_Ext_TA/Kc_H2Av_Knockdown_RNA_Expression_Tiling_Array","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","PolyA-RNA;Kc167;CG5499-RNAi;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array"
"RNA-tiling-array","PolyA-RNA","mRNA","Henikoff, S.","2762","worm/Henikoff_Transcription_Ext_VISTA","RNA expression profiling","data set","Young Adult","C. elegans","PolyA-RNA;N2;Young Adult;RNA-tiling-array"
"DNA-seq","Nucleosome","Chromatin Structure","Lieb, J.","2763","worm/LiebNUCL/MXEMB","Chromatin structure","data set","Mixed Embryos","C. elegans","Nucleosome;N2;Mixed Embryos;20 degree celsius;DNA-seq"
"DNA-seq","Nucleosome","Chromatin Structure","Lieb, J.","2764","worm/LiebNUCL/GermlinelessAdults","Chromatin structure","data set","Germlineless young adult","C. elegans","Nucleosome;JK1107;Germlineless young adult;20 degree celsius;DNA-seq"
"ChIP-chip","H4K20me1","Histone Modification","Lieb, J.","2765","worm/LIEB_WIG_CHIPCHIP_H4/AB9051_H4K20ME1104513_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H4K20me1;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H4acTetra","Histone Modification","Lieb, J.","2766","worm/LIEB_WIG_CHIPCHIP_H4/LPAR109_H4TETRAAC109_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H4acTetra;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","cbp","Non TF Chromatin binding factor","Lieb, J.","2767","worm/LIEB_WIG_CHIPCHIP_CHR_CPB1","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","cbp;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H4","Histone Modification","Lieb, J.","2768","worm/LIEB_WIG_CHIPCHIP_COREHIS/MP05858_H4DAM1636076_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H4;Larvae L3 stage;20 degree celsius;ChIP-chip"
"RNA-tiling-array","PolyA-RNA","mRNA","Henikoff, S.","2769","fly/Henikoff_Salt_Ext_TA/S2_RNA_Expression_Tiling_Array","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","PolyA-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array"
"ChIP-chip","H3K9me1","Histone Modification","Lieb, J.","2770","worm/LIEB_WIG_CHIPCHIP_H3K9/AB9045_H3K9ME1291918_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K9me1;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","Lieb, J.","2771","worm/LIEB_WIG_CHIPCHIP_H3K27/AB4729_H3K27AC361571_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K27ac;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","Lieb, J.","2773","worm/LIEB_WIG_CHIPCHIP_H3K27/WA30634849_H3K27AC_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K27ac;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H4K8ac","Histone Modification","Lieb, J.","2774","worm/LIEB_WIG_CHIPCHIP_H4/AB15823_H4K8AC487128_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H4K8ac;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K4me1","Histone Modification","Lieb, J.","2775","worm/LIEB_WIG_CHIPCHIP_H3K4/AB8895_H3K4ME1733246_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K4me1;Larvae L3 stage;20 degree celsius;ChIP-chip"
"RNA-seq","small-RNA","small RNA","Waterston, R.","2776","worm/miRNA_W2776","Gene Structure","data set","Mixed stage of Embryos","C. elegans","small-RNA;N2;Mixed stage of Embryos;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","2777","worm/miRNA_W2777","Gene Structure","data set","Mid-L1 4 hrs post-L1 stage larvae","C. elegans","small-RNA;N2;Mid-L1 4 hrs post-L1 stage larvae;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","2778","worm/miRNA_W2778","Gene Structure","data set","Mid-L2 14 hrs post-L1 stage larvae","C. elegans","small-RNA;N2;Mid-L2 14 hrs post-L1 stage larvae;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","2779","worm/miRNA_W2779","Gene Structure","data set","Mid-L3 25 hrs post-L1 stage larvae","C. elegans","small-RNA;N2;Mid-L3 25 hrs post-L1 stage larvae;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","2780","worm/miRNA_W2780","Gene Structure","data set","Mid-L4 36 hrs post-L1 stage larvae","C. elegans","small-RNA;N2;Mid-L4 36 hrs post-L1 stage larvae;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","2781","worm/miRNA_W2781","Gene Structure","data set","Young adult 48 hrs post-L1 stage larvae","C. elegans","small-RNA;N2;Young adult 48 hrs post-L1 stage larvae;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","2782","worm/miRNA_W2782","Gene Structure","data set","Young Adult Males","C. elegans","small-RNA;dpy28(y1);Young Adult Males;RNA-seq"
"ChIP-seq","MCM2-7","DNA Replication","MacAlpine, D.","2783","fly/MacAlpine_MCM_CHIPSEQ_COMB/Kc167_MCM_2_7","Replication","data set","Late Embryonic stage","D. melanogaster","MCM2-7;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-seq"
"ChIP-chip","H4K20me1","Histone Modification","Lieb, J.","2784","worm/LIEB_WIG_CHIPCHIP_H4/AB9051_H4K20ME1104513_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H4K20me1;Larvae L3 stage;20 degree celsius;ChIP-chip"
"RNA-seq","small-RNA","small RNA","Waterston, R.","2785","worm/miRNA_W2785","Gene Structure","data set","Young adult DAY0post-L4 molt stage larvae","C. elegans","small-RNA;spe-9(hc88);Young adult DAY0post-L4 molt stage larvae;23 degree celsius;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","2786","worm/miRNA_W2786","Gene Structure","data set","Adult 5 days post-L4 stage larvae","C. elegans","small-RNA;spe-9(hc88);Adult 5 days post-L4 stage larvae;23 degree celsius;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","2787","worm/miRNA_W2787","Gene Structure","data set","Adult spe-9(hc88) 8 days post-L4 molt stage larvae","C. elegans","small-RNA;spe-9(hc88);Adult spe-9(hc88) 8 days post-L4 molt stage larvae;23 degree celsius;RNA-seq"
"RNA-seq","small-RNA","small RNA","Waterston, R.","2788","worm/miRNA_W2788","Gene Structure","data set","Adult 12 days post-L4 stage larvae","C. elegans","small-RNA;spe-9(hc88);Adult 12 days post-L4 stage larvae;23 degree celsius;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2820","fly/Lai_RNASEQ_DUAL_CELLS/CMEL1_BS28","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;CME-L1;Larvae 3rd instar;ventral prothoracic disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2820","fly/CMEL1_V009.sam.gz.bam.sorted","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;CME-L1;Larvae 3rd instar;ventral prothoracic disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Piano, F.","2821","worm/miRNA_eri-1_solexa.ws220.sam.gz_sorted","RNA expression profiling","data set","Young Adult","C. elegans","small-RNA;GR1373;Young Adult;25 degree celsius;RNA-seq"
"RNA-seq","small-RNA","small RNA","Piano, F.","2822","worm/miRNA-glp-4_solexa.ws220.sam.gz_sorted","RNA expression profiling","data set","Young Adult","C. elegans","small-RNA;SS104;Young Adult;25 degree celsius;RNA-seq"
"RNA-seq","small-RNA","small RNA","Piano, F.","2823","worm/miRNA_spermatids_solexa.ws220.sam.gz_sorted","RNA expression profiling","data set","Adult Males 70 hr post-L1 stage larvae","C. elegans","small-RNA;him-8(e1489);Adult Males 70 hr post-L1 stage larvae;25 degree celsius;spermatids;RNA-seq"
"RNA-seq","small-RNA","small RNA","Piano, F.","2825","worm/miRNA_mixed_stage_solexa.ws220.sam.gz_sorted","RNA expression profiling","data set","Mixed Population Worms","C. elegans","small-RNA;N2;Mixed Population Worms;25 degree celsius;RNA-seq"
"RNA-seq","small-RNA","small RNA","Piano, F.","2826","worm/miRNA_embryos_solexa.ws220.sam.gz_sorted","RNA expression profiling","data set","Mixed Embryos","C. elegans","small-RNA;N2;Mixed Embryos;25 degree celsius;RNA-seq"
"RNA-seq","small-RNA","small RNA","Piano, F.","2827","worm/miRNA_eri-1.ws220.sam.gz_sorted","RNA expression profiling","data set","Young Adult","C. elegans","small-RNA;GR1373;Young Adult;25 degree celsius;RNA-seq"
"RNA-seq","small-RNA","small RNA","Piano, F.","2828","worm/miRNA-glp-4.ws220.sam.gz_sorted","RNA expression profiling","data set","Young Adult","C. elegans","small-RNA;SS104;Young Adult;25 degree celsius;RNA-seq"
"RNA-seq","small-RNA","small RNA","Piano, F.","2829","worm/miRNA_spermatids.ws220.sam.gz_sorted","RNA expression profiling","data set","Adult Males 70 hr post-L1 stage larvae","C. elegans","small-RNA;him-8(e1489);Adult Males 70 hr post-L1 stage larvae;25 degree celsius;spermatids;RNA-seq"
"RNA-seq","small-RNA","small RNA","Piano, F.","2830","worm/miRNA_oocytes_solexa.ws220.sam.gz_sorted","RNA expression profiling","data set","Adult Males 70 hr post-L1 stage larvae","C. elegans","small-RNA;BA1;Adult Males 70 hr post-L1 stage larvae;25 degree celsius;unfertilized oocytes;RNA-seq"
"RNA-seq","small-RNA","small RNA","Piano, F.","2831","worm/miRNA_young_adult.ws220.sam.gz_sorted","RNA expression profiling","data set","Young Adult","C. elegans","small-RNA;N2;Young Adult;25 degree celsius;RNA-seq"
"RNA-seq","small-RNA","small RNA","Piano, F.","2832","worm/miRNA_oocytes.ws220.sam.gz_sorted","RNA expression profiling","data set","Adult Males 70 hr post-L1 stage larvae","C. elegans","small-RNA;BA1;Adult Males 70 hr post-L1 stage larvae;25 degree celsius;unfertilized oocytes;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2833","fly/Lai_RNASEQ_DUAL_ENR_T/Dcr-2_L811fsX_ovaries_Ago1IP","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Dcr-2L811fsX;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2833","fly/OR2_V065.sam.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Dcr-2L811fsX;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2834","fly/Lai_RNASEQ_DUAL_T/Ago2_414_ovaries","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Ago2 414;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2834","fly/O_V089.sam.gz.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Ago2 414;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2866","fly/YF1.2913_BS153.bam.sorted","Gene Structure","data set","Adult Female, eclosion + 1 day","D. melanogaster","total-RNA;Y cn bw sp;Adult Female, eclosion + 1 day;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2866","fly/YF1.2866_merged_hits.sam.bam.sorted","Gene Structure","data set","Adult Female, eclosion + 1 day","D. melanogaster","total-RNA;Y cn bw sp;Adult Female, eclosion + 1 day;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2867","fly/YF30.2914_BS165.bam.sorted","Gene Structure","data set","Adult Female, eclosion + 30 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Female, eclosion + 30 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2867","fly/YF30.2867_merged_hits.sam.bam.sorted","Gene Structure","data set","Adult Female, eclosion + 30 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Female, eclosion + 30 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2868","fly/YF5.2868_merged_hits.sam.bam.sorted","Gene Structure","data set","Adult Female, eclosion + 5 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Female, eclosion + 5 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2868","fly/YF5.2915_BS159.bam.sorted","Gene Structure","data set","Adult Female, eclosion + 5 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Female, eclosion + 5 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2869","fly/YM1.2916_BS150.bam.sorted","Gene Structure","data set","Adult Male, eclosion + 1 day","D. melanogaster","total-RNA;Y cn bw sp;Adult Male, eclosion + 1 day;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2869","fly/YM1.2869_merged_hits.sam.bam.sorted","Gene Structure","data set","Adult Male, eclosion + 1 day","D. melanogaster","total-RNA;Y cn bw sp;Adult Male, eclosion + 1 day;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2870","fly/YM30.2870_merged_hits.sam.bam.sorted","Gene Structure","data set","Adult Male, eclosion + 30 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Male, eclosion + 30 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2871","fly/YM5.2871_merged_hits.sam.bam.sorted","Gene Structure","data set","Adult Male, eclosion + 5 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Male, eclosion + 5 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2872","fly/L1.2872_merged_hits.sam.bam.sorted","Gene Structure","data set","Larvae L1 stage","D. melanogaster","total-RNA;Y cn bw sp;Larvae L1 stage;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2872","fly/L1.2919_BS107.bam.sorted","Gene Structure","data set","Larvae L1 stage","D. melanogaster","total-RNA;Y cn bw sp;Larvae L1 stage;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2873","fly/L2.2873_merged_hits.sam.bam.sorted","Gene Structure","data set","Larvae L2 stage","D. melanogaster","total-RNA;Y cn bw sp;Larvae L2 stage;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2874","fly/L312.2874_merged_hits.sam.bam.sorted","Gene Structure","data set","L3 stage, 12 hr post-molt stage larvae","D. melanogaster","total-RNA;Y cn bw sp;L3 stage, 12 hr post-molt stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2875","fly/L313.2875_merged_hits.sam.bam.sorted","Gene Structure","data set","L3 stage, dark blue gut(1-2) stage larvae","D. melanogaster","total-RNA;Y cn bw sp;L3 stage, dark blue gut(1-2) stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2876","fly/L314.2876_merged_hits.sam.bam.sorted","Gene Structure","data set","L3 stage, light blue gut(3-6) stage larvae","D. melanogaster","total-RNA;Y cn bw sp;L3 stage, light blue gut(3-6) stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2877","fly/L315.2877_merged_hits.sam.bam.sorted","Gene Structure","data set","L3 stage, clear gut PS(7-9) stage larvae","D. melanogaster","total-RNA;Y cn bw sp;L3 stage, clear gut PS(7-9) stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2878","fly/P0.2878_merged_hits.sam.bam.sorted","Gene Structure","data set","White prepupae (WPP)","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP);RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2879","fly/P12.2879_merged_hits.sam.bam.sorted","Gene Structure","data set","White prepupae (WPP) + 12 hr","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP) + 12 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2880","fly/P24.2880_merged_hits.sam.bam.sorted","Gene Structure","data set","White prepupae (WPP) + 24 hr","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP) + 24 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2881","fly/P48.2881_merged_hits.sam.bam.sorted","Gene Structure","data set","Pupae, White prepupae (WPP) + 2 days","D. melanogaster","total-RNA;Y cn bw sp;Pupae, White prepupae (WPP) + 2 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2882","fly/P72.2882_merged_hits.sam.bam.sorted","Gene Structure","data set","Pupae, White prepupae (WPP) + 3 days","D. melanogaster","total-RNA;Y cn bw sp;Pupae, White prepupae (WPP) + 3 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2883","fly/P96.2883_merged_hits.sam.bam.sorted","Gene Structure","data set","Pupae, White prepupae (WPP) + 4 days","D. melanogaster","total-RNA;Y cn bw sp;Pupae, White prepupae (WPP) + 4 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2884","fly/E0.2884_merged_hits.sam.bam.sorted","Gene Structure","data set","Embryos 0-2 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 0-2 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2884","fly/E0.2898_BS40.bam.sorted","Gene Structure","data set","Embryos 0-2 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 0-2 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2885","fly/E2.2885_merged_hits.sam.bam.sorted","Gene Structure","data set","Embryos 2-4 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 2-4 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2885","fly/E2.2899_BS43.bam.sorted","Gene Structure","data set","Embryos 2-4 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 2-4 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2886","fly/E4.2900_BS46.bam.sorted","Gene Structure","data set","Embryos 4-6 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 4-6 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2886","fly/E4.2886_merged_hits.sam.bam.sorted","Gene Structure","data set","Embryos 4-6 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 4-6 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2887","fly/E6.2887_merged_hits.sam.bam.sorted","Gene Structure","data set","Embryos 6-8 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 6-8 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2888","fly/E8.2888_merged_hits.sam.bam.sorted","Gene Structure","data set","Embryos 8-10 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 8-10 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2889","fly/E10.2889_merged_hits.sam.bam.sorted","Gene Structure","data set","Embryos 10-12 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 10-12 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2890","fly/E12.2890_merged_hits.sam.bam.sorted","Gene Structure","data set","Embryos 12-14 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 12-14 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2891","fly/E14.2891_merged_hits.sam.bam.sorted","Gene Structure","data set","Embryos 14-16 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 14-16 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2892","fly/E16.2892_merged_hits.sam.bam.sorted","Gene Structure","data set","Embryos 16-18 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 16-18 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2893","fly/E18.2893_merged_hits.sam.bam.sorted","Gene Structure","data set","Embryos 18-20 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 18-20 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2894","fly/E20.2894_merged_hits.sam.bam.sorted","Gene Structure","data set","Embryos 20-22 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 20-22 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2895","fly/E22.2895_merged_hits.sam.bam.sorted","Gene Structure","data set","Embryos 22-24 hrSC","D. melanogaster","total-RNA;Y cn bw sp;Embryos 22-24 hrSC;RNA-seq"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","2896","fly/POST_EMBRYO_Total/Dm_adult_Female_30daysPostEclosion","RNA expression profiling","data set","Adult Female, eclosion + 30 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Female, eclosion + 30 days;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","2897","fly/POST_EMBRYO_Total/Dm_adult_Male_30daysPostEclosion","RNA expression profiling","data set","Adult Male, eclosion + 30 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Male, eclosion + 30 days;RNA-tiling-array"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2898","fly/E0.2898_BS40.bam.sorted","Gene Structure","data set","Embryos 0-2 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 0-2 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2899","fly/E2.2899_BS43.bam.sorted","Gene Structure","data set","Embryos 2-4 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 2-4 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2900","fly/E4.2900_BS46.bam.sorted","Gene Structure","data set","Embryos 4-6 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 4-6 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2901","fly/E6.2901_BS49.bam.sorted","Gene Structure","data set","Embryos 6-8 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 6-8 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2902","fly/E8.2902_BS54.bam.sorted","Gene Structure","data set","Embryos 8-10 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 8-10 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2903","fly/E10.2903_BS55.bam.sorted","Gene Structure","data set","Embryos 10-12 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 10-12 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2904","fly/E12.2904_BS58.bam.sorted","Gene Structure","data set","Embryos 12-14 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 12-14 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2905","fly/E14.2905_BS62.bam.sorted","Gene Structure","data set","Embryos 14-16 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 14-16 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2906","fly/E16.2906_BS66.bam.sorted","Gene Structure","data set","Embryos 16-18 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 16-18 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2907","fly/E18.2907_BS67.bam.sorted","Gene Structure","data set","Embryos 18-20 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 18-20 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2908","fly/E20.2908_BS71.bam.sorted","Gene Structure","data set","Embryos 20-22 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 20-22 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2909","fly/E22.2909_BS73.bam.sorted","Gene Structure","data set","Embryos 22-24 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 22-24 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2910","fly/L2.2910_BS111.bam.sorted","Gene Structure","data set","Larvae L2 stage","D. melanogaster","total-RNA;Y cn bw sp;Larvae L2 stage;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2911","fly/L312.2911_BS113.bam.sorted","Gene Structure","data set","L3 stage, 12 hr post-molt stage larvae","D. melanogaster","total-RNA;Y cn bw sp;L3 stage, 12 hr post-molt stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2912","fly/L315.2912_BS203.bam.sorted","Gene Structure","data set","L3 stage, clear gut PS(7-9) stage larvae","D. melanogaster","total-RNA;Y cn bw sp;L3 stage, clear gut PS(7-9) stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2913","fly/YF1.2913_BS153.bam.sorted","Gene Structure","data set","Adult Female, eclosion + 1 day","D. melanogaster","total-RNA;Y cn bw sp;Adult Female, eclosion + 1 day;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2914","fly/YF30.2914_BS165.bam.sorted","Gene Structure","data set","Adult Female, eclosion + 30 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Female, eclosion + 30 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2915","fly/YF5.2915_BS159.bam.sorted","Gene Structure","data set","Adult Female, eclosion + 5 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Female, eclosion + 5 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2916","fly/YM1.2916_BS150.bam.sorted","Gene Structure","data set","Adult Male, eclosion + 1 day","D. melanogaster","total-RNA;Y cn bw sp;Adult Male, eclosion + 1 day;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2917","fly/YM30.2917_BS162.bam.sorted","Gene Structure","data set","Adult Male, eclosion + 30 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Male, eclosion + 30 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2918","fly/YM5.2918_BS156.bam.sorted","Gene Structure","data set","Adult Male, eclosion + 5 days","D. melanogaster","total-RNA;Y cn bw sp;Adult Male, eclosion + 5 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2919","fly/L1.2919_BS107.bam.sorted","Gene Structure","data set","Larvae L1 stage","D. melanogaster","total-RNA;Y cn bw sp;Larvae L1 stage;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2920","fly/L313.2920_BS196.bam.sorted","Gene Structure","data set","L3 stage, dark blue gut(1-2) stage larvae","D. melanogaster","total-RNA;Y cn bw sp;L3 stage, dark blue gut(1-2) stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2921","fly/L314.2921_BS200.bam.sorted","Gene Structure","data set","L3 stage, light blue gut(3-6) stage larvae","D. melanogaster","total-RNA;Y cn bw sp;L3 stage, light blue gut(3-6) stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2922","fly/P12.2922_BS133.bam.sorted","Gene Structure","data set","White prepupae (WPP) + 12 hr","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP) + 12 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2923","fly/P24.2923_BS136.bam.sorted","Gene Structure","data set","White prepupae (WPP) + 24 hr","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP) + 24 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2924","fly/P48.2924_BS137.bam.sorted","Gene Structure","data set","White prepupae (WPP) + 2 days","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP) + 2 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2925","fly/P72.2925_BS140.bam.sorted","Gene Structure","data set","White prepupae (WPP) + 3 days","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP) + 3 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2926","fly/P96.2926_BS143.bam.sorted","Gene Structure","data set","White prepupae (WPP) + 4 days","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP) + 4 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2927","fly/P0.2927_BS129.bam.sorted","Gene Structure","data set","White prepupae (WPP)","D. melanogaster","total-RNA;Y cn bw sp;White prepupae (WPP);RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","2928","fly/2928_MXEMB.bam.sorted","Gene Structure","data set","Mixed Embryos 0-24 hr","D. melanogaster","total-RNA;Y cn bw sp;Mixed Embryos 0-24 hr;RNA-seq"
"integrated-gene-model","total-RNA","mRNA","Celniker, S.","2929","fly/RACE_TSS_2929","Gene Structure","data set","Cleavage stage","D. melanogaster","total-RNA;Cleavage stage;integrated-gene-model"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2934","worm/itranscript_confirmed_SL_AGGREGATED19","Gene Structure","data set","All stages","C. elegans","total-RNA;N2;All stages;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2934","worm/rainbow_itrans_AGGREGATED19","Gene Structure","data set","All stages","C. elegans","total-RNA;N2;All stages;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2934","worm/itranscript_confirmed_introns_AGGREGATED19","Gene Structure","data set","All stages","C. elegans","total-RNA;N2;All stages;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2934","worm/itranscript_confirmed_polyA_AGGREGATED19","Gene Structure","data set","All stages","C. elegans","total-RNA;N2;All stages;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2934","worm/rainbow_itransRNA_AGGREGATED19","Gene Structure","data set","All stages","C. elegans","total-RNA;N2;All stages;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","2935","worm/EXONS_W2935","Gene Structure","data set","All stages","C. elegans","total-RNA;N2;All stages;RNA-seq"
"integrated-gene-model","insulators","Non TF Chromatin binding factor","White, K.","2946","fly/Insulators_CLASSES_KW","Other chromatin binding sites","data set","Embryos 0-12 hr","D. melanogaster","insulators;Embryos 0-12 hr;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2947","worm/Hillier_confirmed_polyA_SPE9A","Gene Structure","data set","Adult spe-9(hc88) 8 days post-L4 molt stage larvae","C. elegans","total-RNA;23 degree celsius;spe-9(hc88);Adult spe-9(hc88) 8 days post-L4 molt stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2947","worm/rainbow_genelet_SPE9A","Gene Structure","data set","Adult spe-9(hc88) 8 days post-L4 molt stage larvae","C. elegans","total-RNA;23 degree celsius;spe-9(hc88);Adult spe-9(hc88) 8 days post-L4 molt stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2947","worm/rainbow_transcript_SPE9A","Gene Structure","data set","Adult spe-9(hc88) 8 days post-L4 molt stage larvae","C. elegans","total-RNA;23 degree celsius;spe-9(hc88);Adult spe-9(hc88) 8 days post-L4 molt stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2947","worm/Hillier_confirmed_introns_SPE9A","Gene Structure","data set","Adult spe-9(hc88) 8 days post-L4 molt stage larvae","C. elegans","total-RNA;23 degree celsius;spe-9(hc88);Adult spe-9(hc88) 8 days post-L4 molt stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2947","worm/Hillier_confirmed_SL_SPE9A","Gene Structure","data set","Adult spe-9(hc88) 8 days post-L4 molt stage larvae","C. elegans","total-RNA;23 degree celsius;spe-9(hc88);Adult spe-9(hc88) 8 days post-L4 molt stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2948","worm/Hillier_confirmed_polyA_DAUD2","Gene Structure","data set","Dauer daf-2(el370) 91 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;daf-2(e1370);Dauer daf-2(el370) 91 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2948","worm/Hillier_confirmed_introns_DAUD2","Gene Structure","data set","Dauer daf-2(el370) 91 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;daf-2(e1370);Dauer daf-2(el370) 91 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2948","worm/rainbow_genelet_DAUD2","Gene Structure","data set","Dauer daf-2(el370) 91 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;daf-2(e1370);Dauer daf-2(el370) 91 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2948","worm/Hillier_confirmed_SL_DAUD2","Gene Structure","data set","Dauer daf-2(el370) 91 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;daf-2(e1370);Dauer daf-2(el370) 91 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2948","worm/rainbow_transcript_DAUD2","Gene Structure","data set","Dauer daf-2(el370) 91 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;daf-2(e1370);Dauer daf-2(el370) 91 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2949","worm/Hillier_confirmed_polyA_DAUD2ENTR","Gene Structure","data set","Dauer entry daf-2(el370) 48 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;daf-2(e1370);Dauer entry daf-2(el370) 48 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2949","worm/rainbow_transcript_DAUD2ENTR","Gene Structure","data set","Dauer entry daf-2(el370) 48 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;daf-2(e1370);Dauer entry daf-2(el370) 48 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2949","worm/rainbow_genelet_DAUD2ENTR","Gene Structure","data set","Dauer entry daf-2(el370) 48 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;daf-2(e1370);Dauer entry daf-2(el370) 48 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2949","worm/Hillier_confirmed_introns_DAUD2ENTR","Gene Structure","data set","Dauer entry daf-2(el370) 48 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;daf-2(e1370);Dauer entry daf-2(el370) 48 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2950","worm/rainbow_transcript_DAUD2EXT","Gene Structure","data set","Dauer exit daf-2(el370) 91 hrs 15dC 12 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;daf-2(e1370);Dauer exit daf-2(el370) 91 hrs 15dC 12 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2950","worm/rainbow_genelet_DAUD2EXT","Gene Structure","data set","Dauer exit daf-2(el370) 91 hrs 15dC 12 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;daf-2(e1370);Dauer exit daf-2(el370) 91 hrs 15dC 12 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2950","worm/Hillier_confirmed_introns_DAUD2EXT","Gene Structure","data set","Dauer exit daf-2(el370) 91 hrs 15dC 12 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;daf-2(e1370);Dauer exit daf-2(el370) 91 hrs 15dC 12 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2950","worm/Hillier_confirmed_SL_DAUD2EXT","Gene Structure","data set","Dauer exit daf-2(el370) 91 hrs 15dC 12 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;daf-2(e1370);Dauer exit daf-2(el370) 91 hrs 15dC 12 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2950","worm/Hillier_confirmed_polyA_DAUD2EXT","Gene Structure","data set","Dauer exit daf-2(el370) 91 hrs 15dC 12 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;daf-2(e1370);Dauer exit daf-2(el370) 91 hrs 15dC 12 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2951","worm/Hillier_confirmed_SL_EE","Gene Structure","data set","Early Embryos","C. elegans","total-RNA;25 degree celsius;N2;Early Embryos;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2951","worm/rainbow_transcript_EE","Gene Structure","data set","Early Embryos","C. elegans","total-RNA;25 degree celsius;N2;Early Embryos;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2951","worm/Hillier_confirmed_introns_EE","Gene Structure","data set","Early Embryos","C. elegans","total-RNA;25 degree celsius;N2;Early Embryos;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2951","worm/Hillier_confirmed_polyA_EE","Gene Structure","data set","Early Embryos","C. elegans","total-RNA;25 degree celsius;N2;Early Embryos;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2951","worm/rainbow_genelet_EE","Gene Structure","data set","Early Embryos","C. elegans","total-RNA;25 degree celsius;N2;Early Embryos;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2952","worm/Hillier_confirmed_SL_EHIM8","Gene Structure","data set","Embryos him-8(e1480)","C. elegans","total-RNA;20 degree celsius;him-8(e1489);Embryos him-8(e1480);integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2952","worm/rainbow_transcript_EHIM8","Gene Structure","data set","Embryos him-8(e1480)","C. elegans","total-RNA;20 degree celsius;him-8(e1489);Embryos him-8(e1480);integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2952","worm/Hillier_confirmed_introns_EHIM8","Gene Structure","data set","Embryos him-8(e1480)","C. elegans","total-RNA;20 degree celsius;him-8(e1489);Embryos him-8(e1480);integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2952","worm/rainbow_genelet_EHIM8","Gene Structure","data set","Embryos him-8(e1480)","C. elegans","total-RNA;20 degree celsius;him-8(e1489);Embryos him-8(e1480);integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2952","worm/Hillier_confirmed_polyA_EHIM8","Gene Structure","data set","Embryos him-8(e1480)","C. elegans","total-RNA;20 degree celsius;him-8(e1489);Embryos him-8(e1480);integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2954","worm/Hillier_confirmed_polyA_L1LIN35","Gene Structure","data set","Lin-35(n745)  mid-L1 4.0 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;MT10430;Lin-35(n745)  mid-L1 4.0 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2954","worm/rainbow_genelet_L1LIN35","Gene Structure","data set","Lin-35(n745)  mid-L1 4.0 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;MT10430;Lin-35(n745)  mid-L1 4.0 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2954","worm/Hillier_confirmed_introns_L1LIN35","Gene Structure","data set","Lin-35(n745)  mid-L1 4.0 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;MT10430;Lin-35(n745)  mid-L1 4.0 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2954","worm/Hillier_confirmed_SL_L1LIN35","Gene Structure","data set","Lin-35(n745)  mid-L1 4.0 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;MT10430;Lin-35(n745)  mid-L1 4.0 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2954","worm/rainbow_transcript_L1LIN35","Gene Structure","data set","Lin-35(n745)  mid-L1 4.0 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;MT10430;Lin-35(n745)  mid-L1 4.0 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2955","worm/Hillier_confirmed_SL_L1","Gene Structure","data set","Mid-L1 4.0 hrs post-L1 stage larvae","C. elegans","total-RNA;20 degree celsius;N2;Mid-L1 4.0 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2955","worm/Hillier_confirmed_polyA_L1","Gene Structure","data set","Mid-L1 4.0 hrs post-L1 stage larvae","C. elegans","total-RNA;20 degree celsius;N2;Mid-L1 4.0 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2955","worm/Hillier_confirmed_introns_L1","Gene Structure","data set","Mid-L1 4.0 hrs post-L1 stage larvae","C. elegans","total-RNA;20 degree celsius;N2;Mid-L1 4.0 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2955","worm/rainbow_transcript_L1","Gene Structure","data set","Mid-L1 4.0 hrs post-L1 stage larvae","C. elegans","total-RNA;20 degree celsius;N2;Mid-L1 4.0 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2955","worm/rainbow_genelet_L1","Gene Structure","data set","Mid-L1 4.0 hrs post-L1 stage larvae","C. elegans","total-RNA;20 degree celsius;N2;Mid-L1 4.0 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2956","worm/Hillier_confirmed_polyA_L2","Gene Structure","data set","Mid-L2 17.75 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;N2;Mid-L2 17.75 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2956","worm/rainbow_genelet_L2","Gene Structure","data set","Mid-L2 17.75 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;N2;Mid-L2 17.75 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2956","worm/Hillier_confirmed_introns_L2","Gene Structure","data set","Mid-L2 17.75 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;N2;Mid-L2 17.75 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2956","worm/rainbow_transcript_L2","Gene Structure","data set","Mid-L2 17.75 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;N2;Mid-L2 17.75 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2956","worm/Hillier_confirmed_SL_L2","Gene Structure","data set","Mid-L2 17.75 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;N2;Mid-L2 17.75 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2957","worm/Hillier_confirmed_SL_DAUD2ENTR","Gene Structure","data set","Mid-L3 26.75 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;N2;Mid-L3 26.75 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2957","worm/Hillier_confirmed_SL_L3","Gene Structure","data set","Mid-L3 26.75 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;N2;Mid-L3 26.75 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2957","worm/rainbow_genelet_L3","Gene Structure","data set","Mid-L3 26.75 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;N2;Mid-L3 26.75 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2957","worm/Hillier_confirmed_polyA_L3","Gene Structure","data set","Mid-L3 26.75 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;N2;Mid-L3 26.75 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2957","worm/Hillier_confirmed_introns_L3","Gene Structure","data set","Mid-L3 26.75 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;N2;Mid-L3 26.75 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2957","worm/rainbow_transcript_L3","Gene Structure","data set","Mid-L3 26.75 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;N2;Mid-L3 26.75 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2959","worm/Hillier_confirmed_polyA_L4DPY28","Gene Structure","data set","Male  mid-L4 30 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;dpy28(y1);Male  mid-L4 30 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2959","worm/Hillier_confirmed_SL_L4DPY28","Gene Structure","data set","Male  mid-L4 30 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;dpy28(y1);Male  mid-L4 30 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2959","worm/rainbow_genelet_L4DPY28","Gene Structure","data set","Male  mid-L4 30 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;dpy28(y1);Male  mid-L4 30 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2959","worm/rainbow_transcript_L4DPY28","Gene Structure","data set","Male  mid-L4 30 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;dpy28(y1);Male  mid-L4 30 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2959","worm/Hillier_confirmed_introns_L4DPY28","Gene Structure","data set","Male  mid-L4 30 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;dpy28(y1);Male  mid-L4 30 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2960","worm/Hillier_confirmed_polyA_YA","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2960","worm/rainbow_transcript_YA","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2960","worm/Hillier_confirmed_introns_YA","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2960","worm/rainbow_genelet_YA","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;integrated-gene-model"
"integrated-gene-model","total-RNA","mRNA","Waterston, R.","2960","worm/Hillier_confirmed_SL_YA","Gene Structure","data set","Young Adult (pre-gravid) 46 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;integrated-gene-model"
"ChIP-chip","ZFP-1","Non TF Chromatin binding factor","Lieb, J.","2969","worm/LIEB_WIG_CHIPCHIP_CHR_ZFP1/JL00006_ZFP1_N2_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","ZFP-1;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","Y39G10AR.18","Histone Modification","Lieb, J.","2970","worm/LIEB_WIG_CHIPCHIP_CHROMSIL/SDQ4129_Y39G10AR18_N2_MXEMB","Histone modification and replacement","data set","Mixed Embryos","C. elegans","Y39G10AR.18;Mixed Embryos;20 degree celsius;ChIP-chip"
"RNA-seq","small-RNA","small RNA","Lai, E.","2971","fly/V001.sam.gz.bam.sorted","RNA expression profiling","data set","Embryos 2-18 hr","D. melanogaster","small-RNA;w1118;Embryos 2-18 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2971","fly/Lai_RNASEQ_DUAL_E/2-18hr_embryos_non-irradiated","RNA expression profiling","data set","Embryos 2-18 hr","D. melanogaster","small-RNA;w1118;Embryos 2-18 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2972","fly/V002.sam.gz.bam.sorted","RNA expression profiling","data set","Embryos 2-18 hr","D. melanogaster","small-RNA;w1118;Embryos 2-18 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2972","fly/Lai_RNASEQ_DUAL_E/2-18hr_embryos_irradiated","RNA expression profiling","data set","Embryos 2-18 hr","D. melanogaster","small-RNA;w1118;Embryos 2-18 hr;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2973","fly/Lai_RNASEQ_DUAL_CELLS/S2_Rubin_Ecdysone","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2973","fly/2973_merged_sam","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2974","fly/Lai_RNASEQ_DUAL_CELLS/Kc_Rubin_Ecdysone","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;Kc-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2974","fly/2974_merged_sam","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;Kc-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2975","fly/V098.sam.gz.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Dcr-2L811fsX;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2975","fly/Lai_RNASEQ_DUAL_T/Dcr-2_L811fsX_Ovary","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Dcr-2L811fsX;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2976","fly/V097.sam.gz.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Canton S;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","2976","fly/Lai_RNASEQ_DUAL_T/CantonS_Adult_ovaries","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Canton S;Adult Female;Adult ovaries;RNA-seq"
"ChIP-seq","MCM2-7","DNA Replication","MacAlpine, D.","2979","fly/MacAlpine_MCM_CHIPSEQ_COMB/S2_DRSC_MCM_2_7","Replication","data set","Late Embryonic stage","D. melanogaster","MCM2-7;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","2980","fly_dp/2980_merged_hits_all.sam.bam.sorted","RNA expression profiling","data set","Dpse Adult Female","D. pseudoobscura","total-RNA;D.pseudoobscura wild-type;Dpse Adult Female;Dpse Female heads;RNA-seq"
"ChIP-chip","ASH-1","Non TF Chromatin binding factor","Karpen, G.","2984","fly/KARPEN_CHIPCHIP_HISMODENZ_S2/ASH1Q4177.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","ASH-1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","dSFMBT","Non TF Chromatin binding factor","Karpen, G.","2986","fly/KARPEN_CHIPCHIP_POLYCOMB_BG3/dSFMBTQ2642.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","dSFMBT;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","E(Z)","Non TF Chromatin binding factor","Karpen, G.","2987","fly/KARPEN_CHIPCHIP_HISMODENZ_BG3/EZ-Q3421.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","E(Z);ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","E(Z)","Non TF Chromatin binding factor","Karpen, G.","2988","fly/KARPEN_CHIPCHIP_HISMODENZ_S2/EZ-Q3421.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","E(Z);S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H2AV","Histone Modification","Karpen, G.","2989","fly/KARPEN_CHIPCHIP_HVARS_OR/H2AV_9751.14-16hrORembryo","Histone modification and replacement","data set","Embryos 14-16 hr OR","D. melanogaster","H2AV;Oregon-R;Embryos 14-16 hr OR;ChIP-chip"
"ChIP-chip","H2AV","Histone Modification","Karpen, G.","2990","fly/KARPEN_CHIPCHIP_HVARS_OR/H2AV_9751.2-4hrORembryo","Histone modification and replacement","data set","Embryos 2-4 hr OR","D. melanogaster","H2AV;Oregon-R;Embryos 2-4 hr OR;ChIP-chip"
"ChIP-chip","H2AV","Histone Modification","Karpen, G.","2991","fly/KARPEN_CHIPCHIP_HVARS_S2/H2AV_9751.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H2AV;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H2Bubi","Histone Modification","Karpen, G.","2992","fly/KARPEN_CHIPCHIP_HVARS_OR/H2B-ubiq_NRO3.14-16hrORembryo","Histone modification and replacement","data set","Embryos 14-16 hr OR","D. melanogaster","H2Bubi;Oregon-R;Embryos 14-16 hr OR;ChIP-chip"
"ChIP-chip","H2Bubi","Histone Modification","Karpen, G.","2993","fly/KARPEN_CHIPCHIP_HVARS_OR/H2B-ubiq_NRO3.2-4hrORembryo","Histone modification and replacement","data set","Embryos 2-4 hr OR","D. melanogaster","H2Bubi;Oregon-R;Embryos 2-4 hr OR;ChIP-chip"
"ChIP-chip","H2Bubi","Histone Modification","Karpen, G.","2994","fly/KARPEN_CHIPCHIP_HVARS_CL8","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H2Bubi;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","H3K18ac","Histone Modification","Karpen, G.","2995","fly/KARPEN_CHIPCHIP_HISMODS_H3_L3/H3K18Ac_newlot.D.mel3rdInstarLarvaeNuclei","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K18ac;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","H3K18ac","Histone Modification","Karpen, G.","2996","fly/KARPEN_CHIPCHIP_HISMODS_H3_KC/H3K18Ac_newlot.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K18ac;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K23ac","Histone Modification","Karpen, G.","2997","fly/KARPEN_CHIPCHIP_HISMODS_H3_OR/H3K23ac.14-16hrORembryo","Histone modification and replacement","data set","Embryos 14-16 hr OR","D. melanogaster","H3K23ac;Oregon-R;Embryos 14-16 hr OR;ChIP-chip"
"ChIP-chip","H3K23ac","Histone Modification","Karpen, G.","2998","fly/KARPEN_CHIPCHIP_HISMODS_H3_KC/H3K23ac.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K23ac;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K27me2","Histone Modification","Karpen, G.","2999","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K27me2-TJ.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K27me2;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K27me2","Histone Modification","Karpen, G.","3000","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K27me2-TJ.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K27me2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K36me1","Histone Modification","Karpen, G.","3001","fly/KARPEN_CHIPCHIP_HISMODS_H3_OR/H3K36me1.2-4hrORembryo","Histone modification and replacement","data set","Embryos 2-4 hr OR","D. melanogaster","H3K36me1;Oregon-R;Embryos 2-4 hr OR;ChIP-chip"
"ChIP-chip","H3K36me1","Histone Modification","Karpen, G.","3002","fly/KARPEN_CHIPCHIP_HISMODS_H3_CL8/H3K36me1.Clone_8","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K36me1;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","H3K36me1","Histone Modification","Karpen, G.","3003","fly/KARPEN_CHIPCHIP_HISMODS_H3_KC/H3K36me1.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K36me1;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Karpen, G.","3004","fly/KARPEN_CHIPCHIP_HISMODS_H3_CL8/H3K36me3.Clone_8","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K36me3;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","H3K79me1","Histone Modification","Karpen, G.","3005","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K79Me1.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K79me1;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","Karpen, G.","3006","fly/KARPEN_CHIPCHIP_HISMODS_H3_L3/H3K9ac.D.mel3rdInstarLarvaeNuclei","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K9ac;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","Karpen, G.","3007","fly/KARPEN_CHIPCHIP_HISMODS_H3_KC/H3K9ac.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K9ac;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9acS10P","Histone Modification","Karpen, G.","3008","fly/KARPEN_CHIPCHIP_HISMODS_H3_L3/H3K9acS10P_newabcamlot.D.mel3rdInstarLarvaeNuclei","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K9acS10P;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","H3K9acS10P","Histone Modification","Karpen, G.","3009","fly/KARPEN_CHIPCHIP_HISMODS_H3_KC/H3K9acS10P_newabcamlot.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K9acS10P;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9acS10P","Histone Modification","Karpen, G.","3010","fly/KARPEN_CHIPCHIP_HISMODS_H3_CL8/H3K9acS10P_newlot.Clone_8","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K9acS10P;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","H3K9me2","Histone Modification","Karpen, G.","3011","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K9me2-Ab2_newlot.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K9me2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","Karpen, G.","3012","fly/KARPEN_CHIPCHIP_HISMODS_H3_OR/H3K9me3abcam.2-4hrORembryo","Histone modification and replacement","data set","Embryos 2-4 hr OR","D. melanogaster","H3K9me3;Oregon-R;Embryos 2-4 hr OR;ChIP-chip"
"ChIP-chip","H3K9me3","Histone Modification","Karpen, G.","3013","fly/KARPEN_CHIPCHIP_HISMODS_H3_KC/H3K9me3abcam.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K9me3;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H4K20me1","Histone Modification","Karpen, G.","3014","fly/KARPEN_CHIPCHIP_HISMODS_H4_S2/H4K20me.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H4K20me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","HP1b","Non TF Chromatin binding factor","Karpen, G.","3015","fly/KARPEN_CHIPCHIP_CHROMPROT_OR/HP1b_Henikoff.14-16hrORembryo","Other chromatin binding sites","data set","Embryos 14-16 hr OR","D. melanogaster","HP1b;Oregon-R;Embryos 14-16 hr OR;ChIP-chip"
"ChIP-chip","HP1b","Non TF Chromatin binding factor","Karpen, G.","3017","fly/KARPEN_CHIPCHIP_CHROMPROT_CL8/HP1b_Henikoff.Clone_8","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","HP1b;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","HP1b","Non TF Chromatin binding factor","Karpen, G.","3019","fly/KARPEN_CHIPCHIP_CHRPROT_KC/HP1b_Henikoff.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","HP1b;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","HP1b","Non TF Chromatin binding factor","Karpen, G.","3020","fly/KARPEN_CHIPCHIP_CHRPROT_S2/HP1bQ4114.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","HP1b;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","HP1c","Non TF Chromatin binding factor","Karpen, G.","3021","fly/KARPEN_CHIPCHIP_CHROMPROT_OR/HP1c_MO462.14-16hrORembryo","Other chromatin binding sites","data set","Embryos 14-16 hr OR","D. melanogaster","HP1c;Oregon-R;Embryos 14-16 hr OR;ChIP-chip"
"ChIP-chip","HP1c","Non TF Chromatin binding factor","Karpen, G.","3022","fly/KARPEN_CHIPCHIP_CHROMPROT_OR/HP1c_MO462.2-4hrORembryo","Other chromatin binding sites","data set","Embryos 2-4 hr OR","D. melanogaster","HP1c;Oregon-R;Embryos 2-4 hr OR;ChIP-chip"
"ChIP-chip","HP1c","Histone Modification","Karpen, G.","3023","fly/KARPEN_CHIPCHIP_CHROMPROTS_L3/HP1c_MO462.D.mel3rdInstarLarvaeNuclei","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","HP1c;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","HP1a","Non TF Chromatin binding factor","Karpen, G.","3024","fly/KARPEN_CHIPCHIP_CHROMPROT_OR/HP1wa191.14-16hrORembryo","Other chromatin binding sites","data set","Embryos 14-16 hr OR","D. melanogaster","HP1a;Oregon-R;Embryos 14-16 hr OR;ChIP-chip"
"ChIP-chip","HP2","Non TF Chromatin binding factor","Karpen, G.","3025","fly/KARPEN_CHIPCHIP_CHROMPROT_OR/HP2_Ab2-90.14-16hrORembryo","Other chromatin binding sites","data set","Embryos 14-16 hr OR","D. melanogaster","HP2;Oregon-R;Embryos 14-16 hr OR;ChIP-chip"
"ChIP-chip","HP2","Non TF Chromatin binding factor","Karpen, G.","3026","fly/KARPEN_CHIPCHIP_CHRPROT_BG3/HP2_Ab2-90.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","HP2;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","HP2","Non TF Chromatin binding factor","Karpen, G.","3027","fly/KARPEN_CHIPCHIP_CHROMPROT_CL8/HP2_Ab2-90.Clone_8","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","HP2;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","HP2","Histone Modification","Karpen, G.","3028","fly/KARPEN_CHIPCHIP_CHROMPROTS_L3/HP2_Ab2-90.D.mel3rdInstarLarvaeNuclei","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","HP2;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","HP2","Non TF Chromatin binding factor","Karpen, G.","3029","fly/KARPEN_CHIPCHIP_CHRPROT_KC/HP2_Ab2-90.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","HP2;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","ISWI","Non TF Chromatin binding factor","Karpen, G.","3030","fly/KARPEN_CHIPCHIP_REMODEL_BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","ISWI;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","ISWI","Non TF Chromatin binding factor","Karpen, G.","3031","fly/KARPEN_CHIPCHIP_REMODEL_KC/ISWI_Q4095.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","ISWI;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","ISWI","Non TF Chromatin binding factor","Karpen, G.","3032","fly/KARPEN_CHIPCHIP_REMODEL_S2/ISWI_Q4095.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","ISWI;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","JHDM1","Non TF Chromatin binding factor","Karpen, G.","3033","fly/KARPEN_CHIPCHIP_HISMODENZ_S2/JHDM1_Q2634.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","JHDM1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","JIL-1","Non TF Chromatin binding factor","Karpen, G.","3034","fly/KARPEN_CHIPCHIP_DOSCOMP_OR","Other chromatin binding sites","data set","Embryos 14-16 hr OR","D. melanogaster","JIL-1;Oregon-R;Embryos 14-16 hr OR;ChIP-chip"
"ChIP-chip","JIL-1","Non TF Chromatin binding factor","Karpen, G.","3035","fly/KARPEN_CHIPCHIP_DOSCOMP_BG3/JIL1_Q3433.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","JIL-1;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","JIL-1","Non TF Chromatin binding factor","Karpen, G.","3036","fly/KARPEN_CHIPCHIP_DOSCOMP_CL8/JIL1_Q3433.Clone_8","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","JIL-1;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","JIL-1","Non TF Chromatin binding factor","Karpen, G.","3037","fly/KARPEN_CHIPCHIP_DOSCOMP_KC_/JIL1_Q3433.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","JIL-1;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","JIL-1","Non TF Chromatin binding factor","Karpen, G.","3038","fly/KARPEN_CHIPCHIP_DOSCOMP_S2/JIL-1_Q4170.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","JIL-1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","MBD-R2","Non TF Chromatin binding factor","Karpen, G.","3039","fly/KARPEN_CHIPCHIP_CHRPROT_S2/MBD-R2_Q4167.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","MBD-R2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","MLE","Non TF Chromatin binding factor","Karpen, G.","3040","fly/KARPEN_CHIPCHIP_CHRPROT_S2/MLE_Q4142.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","MLE;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","MOF","Histone Modification","Karpen, G.","3041","fly/KARPEN_CHIPCHIP_DOSCOMP_BG3/MOF_Q4145.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","MOF;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","MOF","Non TF Chromatin binding factor","Karpen, G.","3042","fly/KARPEN_CHIPCHIP_DOSCOMP_CL8/MOF_Q4145.Clone_8","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","MOF;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","MOF","Non TF Chromatin binding factor","Karpen, G.","3043","fly/KARPEN_CHIPCHIP_DOSCOMP_KC_/MOF_Q4145.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","MOF;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","MOF","Non TF Chromatin binding factor","Karpen, G.","3044","fly/KARPEN_CHIPCHIP_DOSCOMP_S2/MOF_Q4145.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","MOF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","MRG15","Non TF Chromatin binding factor","Karpen, G.","3045","fly/KARPEN_CHIPCHIP_HISMODENZ_BG3/MRG15_Q2481.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","MRG15;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","MRG15","Non TF Chromatin binding factor","Karpen, G.","3046","fly/KARPEN_CHIPCHIP_HISMODENZ_KC/MRG15_Q2481.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","MRG15;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","MRG15","Non TF Chromatin binding factor","Karpen, G.","3047","fly/KARPEN_CHIPCHIP_HISMODENZ_S2/MRG15_Q2481.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","MRG15;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","NURF301","Non TF Chromatin binding factor","Karpen, G.","3048","fly/KARPEN_CHIPCHIP_REMODEL_S2/Nurf301_Q4159.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","NURF301;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","PCL","Non TF Chromatin binding factor","Karpen, G.","3049","fly/KARPEN_CHIPCHIP_POLYCOMB_S2/PCLQ3412.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","PCL;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","PIWI","Histone Modification","Karpen, G.","3051","fly/KARPEN_CHIPCHIP_REMODEL_L3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","PIWI;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","POF","Non TF Chromatin binding factor","Karpen, G.","3052","fly/KARPEN_CHIPCHIP_CHRPROT_BG3/POF_MO459.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","POF;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","POF","Histone Modification","Karpen, G.","3053","fly/KARPEN_CHIPCHIP_CHROMPROTS_L3/POF_MO459.D.mel3rdInstarLarvaeNuclei","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","POF;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","PR-Set7","Non TF Chromatin binding factor","Karpen, G.","3054","fly/KARPEN_CHIPCHIP_CHRPROT_S2/PR-Set7_Q3484.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","PR-Set7;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Psc","Non TF Chromatin binding factor","Karpen, G.","3055","fly/KARPEN_CHIPCHIP_POLYCOMB_BG3/Psc.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","Psc;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","RPD3","Non TF Chromatin binding factor","Karpen, G.","3057","fly/KARPEN_CHIPCHIP_HISMODENZ_S2/RPD3-Q3451.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","RPD3;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","SPT16","Non TF Chromatin binding factor","Karpen, G.","3058","fly/KARPEN_CHIPCHIP_REMODEL_S2/SPT16_Q2583.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","SPT16;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Su(var)3-7","Non TF Chromatin binding factor","Karpen, G.","3060","fly/KARPEN_CHIPCHIP_HISMODENZ_KC/Su_var_3-7-Q3448.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Su(var)3-7;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Su(var)3-9","Non TF Chromatin binding factor","Karpen, G.","3061","fly/KARPEN_CHIPCHIP_HISMODENZ_S2/Su_var_3-9-Q2598.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Su(var)3-9;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","WDS","Non TF Chromatin binding factor","Karpen, G.","3062","fly/KARPEN_CHIPCHIP_REMODEL_KC/WDS_Q2691.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","WDS;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","ZW5","Non TF Chromatin binding factor","Karpen, G.","3064","fly/KARPEN_CHIPCHIP_INS_BG3/ZW5.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","ZW5;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-seq","GEI-11","Transcriptional Factor","Snyder, M.","3066","worm/SNYDER_ANTIGFP_CHIPCHIP_GEI11/GEI11_L3_GFP","TF binding sites","data set","Larvae L3 stage","C. elegans","GEI-11;20 degree celsius;OP179;Larvae L3 stage;ChIP-seq"
"ChIP-seq","CEH-26","Transcriptional Factor","Snyder, M.","3068","worm/SNYDER_ANTIGFP_CHIPCHIP_CEH26","TF binding sites","data set","Late Embryos","C. elegans","CEH-26;OP500;Late Embryos;20 degree celsius;ChIP-seq"
"ChIP-seq","MEF-2","Transcriptional Factor","Snyder, M.","3071","worm/SNYDER_ANTIGFP_CHIPCHIP_MEF2","TF binding sites","data set","Fed L1 stage larvae","C. elegans","MEF-2;OP301;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","EFL-1","Transcriptional Factor","Snyder, M.","3072","worm/SNYDER_ANTIGFP_CHIPCHIP_EFL1/PIE1_EFL1_GFP_YA","TF binding sites","data set","Young Adult","C. elegans","EFL-1;YL445;Young Adult;20 degree celsius;ChIP-seq"
"ChIP-seq","DPL-1","Transcriptional Factor","Snyder, M.","3073","worm/SNYDER_ANTIGFP_CHIPCHIP_DPL1/PIE1_DPL1_GFP_YA","TF binding sites","data set","Young Adult","C. elegans","DPL-1;YL390;Young Adult;20 degree celsius;ChIP-seq"
"ChIP-seq","EFL-1","Transcriptional Factor","Snyder, M.","3074","worm/SNYDER_ANTIGFP_CHIPCHIP_EFL1/Pefl1_EFL1_GFP_L1","TF binding sites","data set","Fed L1 stage larvae","C. elegans","EFL-1;YL424;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","DPL-1","Transcriptional Factor","Snyder, M.","3075","worm/SNYDER_ANTIGFP_CHIPCHIP_DPL1/Pdpl1_DPL1_GFP_L1","TF binding sites","data set","Fed L1 stage larvae","C. elegans","DPL-1;YL425;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","CES-1","Transcriptional Factor","Snyder, M.","3076","worm/SNYDER_ANTIGFP_CHIPCHIP_CES1/CES1_GFP_L1","TF binding sites","data set","Fed L1 stage larvae","C. elegans","CES-1;OP174;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","LIN-15B","Transcriptional Factor","Snyder, M.","3078","worm/SNYDER_ANTIGFP_CHIPCHIP_LIN15B/LIN15B_GFP_L4","TF binding sites","data set","Larvae L4 stage","C. elegans","LIN-15B;OP184;Larvae L4 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","NHR-11","Transcriptional Factor","Snyder, M.","3079","worm/SNYDER_ANTIGFP_CHIPCHIP_NHR11","TF binding sites","data set","Larvae L2 stage","C. elegans","NHR-11;OP305;Larvae L2 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","CES-1","Transcriptional Factor","Snyder, M.","3081","worm/SNYDER_ANTIGFP_CHIPCHIP_CES1/CES1_GFP_L3","TF binding sites","data set","Larvae L3 stage","C. elegans","CES-1;20 degree celsius;OP174;Larvae L3 stage;ChIP-seq"
"ChIP-seq","SEA-2","Transcriptional Factor","Snyder, M.","3082","worm/SNYDER_ANTIGFP_CHIPCHIP_SEA2","TF binding sites","data set","Larvae L3 stage","C. elegans","SEA-2;OP193;Larvae L3 stage;20 degree celsius;ChIP-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3083","fly/3083_merged_hits_all.sam.bam.sorted","RNA expression profiling","data set","Dmel Adult Female 8 days","D. melanogaster","total-RNA;Oregon-R;Dmel Adult Female 8 days;Dmel Female heads;RNA-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3084","fly/3084_merged_hits_all.sam.bam.sorted","RNA expression profiling","data set","Dmel Adult Male 8 days","D. melanogaster","total-RNA;Oregon-R;Dmel Adult Male 8 days;Dmel Male heads;RNA-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3085","fly_dp/3085_merged_hits_all.sam.bam.sorted","RNA expression profiling","data set","Dpse Adult Male","D. pseudoobscura","total-RNA;D.pseudoobscura wild-type;Dpse Adult Male;Dpse Male heads;RNA-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3086","fly_dmoj/3086_merged_hits_all.sam.bam.sorted","RNA expression profiling","data set","Dmoj Adult Male","D. mojavensis","total-RNA;Dmojavensis;Dmoj Adult Male;Dmoj Male heads;RNA-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3087","fly_dmoj/3087_merged_hits_all.sam.bam.sorted","RNA expression profiling","data set","Dmoj Adult Female","D. mojavensis","total-RNA;Dmojavensis;Dmoj Adult Female;Dmoj Female heads;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3089","fly/CG10128.sub_3089.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG10128-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3090","fly/CG9373.sub_3090.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG9373-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3091","fly/CG8781.sub_3091.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG8781-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3092","fly/CG8636.sub_3092.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG8636-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3093","fly/CG7437.sub_3093.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG7437-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3094","fly/CG6779.sub_3094.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG6779-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3095","fly/CG6227.sub_3095.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG6227-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3096","fly/CG5655.sub_3096.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG5655-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3097","fly/CG33106.sub_3097.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG33106-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3098","fly/CG32423.sub_3098.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG32423-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3099","fly/CG17838.sub_3099.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG17838-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3100","fly/CG1101.sub_3100.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG1101-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3101","fly/CG10203.sub_3101.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG10203-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3102","fly/CG8749.sub_3102.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG8749-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3103","fly/CG5821.sub_3103.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG5821-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3104","fly/CG5170.sub_3104.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG5170-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3105","fly/CG4602.sub_3105.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG4602-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3106","fly/CG6841.sub_3106.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG6841-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3107","fly/CG6203.sub_3107.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG6203-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3108","fly/CG5422.sub_3108.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG5422-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3109","fly/CG8912.sub_3109.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG8912-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3110","fly/CG8241.sub_3110.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG8241-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3111","fly/CG16901.sub_3111.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG16901-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3112","fly/CG13425.sub_3112.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG13425-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3113","fly/CG10279.sub_3113.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG10279-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3114","fly/CG6049.sub_3114.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG6049-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3115","fly/CG3312.sub_3115.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG3312-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3116","fly/CG31716.sub_3116.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG31716-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3117","fly/CG30122.sub_3117.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG30122-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3118","fly/CG11266.sub_3118.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG11266-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3119","fly/CG8019.sub_3119.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG8019-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3120","fly/CG7971.sub_3120.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG7971-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3121","fly/CG4816.sub_3121.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG4816-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3122","fly/CG3584.sub_3122.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG3584-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3123","fly/CG1646.sub_3123.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG1646-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3124","fly/CG10851.sub_3124.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG10851-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3125","fly/CG5099.sub_3125.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG5099-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3126","fly/CG4760.sub_3126.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG4760-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3127","fly/CG18350.sub_3127.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG18350-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3128","fly/CG16788.sub_3128.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG16788-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3129","fly/CG1559.sub_3129.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG1559-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3130","fly/CG10377.sub_3130.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG10377-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3131","fly/CG9412.sub_3131.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG9412-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3132","fly/CG6946.sub_3132.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG6946-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3133","fly/CG1987.sub_3133.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG1987-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3134","fly/CG9983.sub_3134.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG9983-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3135","fly/CG5442.sub_3135.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG5442-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3136","fly/CG31000.sub_3136.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG31000-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3137","fly/CG17136.sub_3137.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG17136-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3138","fly/Untreated.sub_3138.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;Untreated-(RNAi-control);S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3139","fly/CG4878.sub_3139.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG4878-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3140","fly/CG4262.sub_3140.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG4262-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3141","fly/CG18426.sub_3141.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG18426-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3142","fly/CG12749.sub_3142.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG12749-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3143","fly/CG7878.sub_3143.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG7878-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3144","fly/CG5836.sub_3144.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG5836-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3145","fly/CG3249.sub_3145.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG3249-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3146","fly/CG10328.sub_3146.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;CG10328-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"ChIP-seq","DAF-12","Transcriptional Factor","Snyder, M.","3147","worm/SNYDER_ANTIGFP_CHIPCHIP_DAF12/DAF12_GFP_L3_OP167","TF binding sites","data set","Larvae L3 stage","C. elegans","DAF-12;OP167;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","F16B12.6","Transcriptional Factor","Snyder, M.","3148","worm/SNYDER_ANTIGFP_CHIPCHIP_F16B12","TF binding sites","data set","Fed L1 stage larvae","C. elegans","F16B12.6;OP114;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","GEI-11","Transcriptional Factor","Snyder, M.","3149","worm/SNYDER_ANTIGFP_CHIPCHIP_GEI11/GEI11_L2_GFP","TF binding sites","data set","Larvae L2 stage","C. elegans","GEI-11;OP179;Larvae L2 stage;20 degree celsius;ChIP-seq"
"ChIP-chip","H3K79me3","Histone Modification","Lieb, J.","3151","worm/LIEB_WIG_CHIPCHIP_H3K79/AB2621_H3K79ME3361576_N2_MXEMB","Histone modification and replacement","data set","Mixed Embryos","C. elegans","H3K79me3;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","IgG control","Non TF Chromatin binding factor","Lieb, J.","3153","worm/LIEB_WIG_CHIPCHIP_CHR_IGG/AB46540_NIGG_N2_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","IgG control;N2;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-seq","EOR-1","Transcriptional Factor","Snyder, M.","3155","worm/SNYDER_ANTIGFP_CHIPCHIP_EOR1/EOR1_L3_GFP","TF binding sites","data set","Larvae L3 stage","C. elegans","EOR-1;OP81;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","ALR-1","Transcriptional Factor","Snyder, M.","3156","worm/Snyder_ANTIGFP_WIG_ALR1_COMB","TF binding sites","data set","Larvae L2 stage","C. elegans","ALR-1;OP200;Larvae L2 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","ALR-1","Transcriptional Factor","Snyder, M.","3156","worm/Snyder_ANTIGFP_ALR1_RECALL","TF binding sites","data set","Larvae L2 stage","C. elegans","ALR-1;OP200;Larvae L2 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","PES-1","Transcriptional Factor","Snyder, M.","3157","worm/Snyder_ANTIGFP_WIG_COMB_PES1_L4_GFP","TF binding sites","data set","Larvae L4 stage","C. elegans","PES-1;OP87;Larvae L4 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","PES-1","Transcriptional Factor","Snyder, M.","3157","worm/Snyder_ANTIGFP_PES1_RECALL","TF binding sites","data set","Larvae L4 stage","C. elegans","PES-1;OP87;Larvae L4 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","3158","worm/Snyder_PHA4_GFP_COMB/PHA4_L2_GFP","TF binding sites","data set","Larvae L2 stage","C. elegans","PHA-4;OP37;Larvae L2 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","3158","worm/Snyder_PHA4_RECALL/PHA4_L2_GFP","TF binding sites","data set","Larvae L2 stage","C. elegans","PHA-4;OP37;Larvae L2 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","EGL-5","Transcriptional Factor","Snyder, M.","3159","worm/Snyder_ANTIGFP_WIG_COMB_EGL5_L3_GFP","TF binding sites","data set","Larvae L3 stage","C. elegans","EGL-5;OP54;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","EGL-5","Transcriptional Factor","Snyder, M.","3159","worm/SNYDER_ANTIGFP_EGL5_RECALL","TF binding sites","data set","Larvae L3 stage","C. elegans","EGL-5;OP54;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","3161","worm/Snyder_PHA4_GFP_COMB/PHA4_GFP_YA","TF binding sites","data set","Young Adult","C. elegans","PHA-4;OP37;Young Adult;20 degree celsius;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","3161","worm/Snyder_PHA4_RECALL/PHA4_GFP_YA","TF binding sites","data set","Young Adult","C. elegans","PHA-4;OP37;Young Adult;20 degree celsius;ChIP-seq"
"ChIP-chip","LEM-2","Non TF Chromatin binding factor","Lieb, J.","3164","worm/LIEB_WIG_CHROMNUC_ENV/SDQ4051_LEM2_SP646_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","LEM-2;SP646;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","LEM-2","Non TF Chromatin binding factor","Lieb, J.","3165","worm/LIEB_WIG_CHROMNUC_ENV/SDQ3891_LEM2_VC1317_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","LEM-2;VC1317;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","LEM-2","Non TF Chromatin binding factor","Lieb, J.","3166","worm/LIEB_WIG_CHROMNUC_ENV/SDQ4051_LEM2_N2_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","LEM-2;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K36me1","Histone Modification","Karpen, G.","3170","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K36me1.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K36me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K27me3","Histone Modification","Lieb, J.","3171","worm/LIEB_WIG_CHIPCHIP_H3K27/HK00013_H3K27ME31E7_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K27me3;Early Embryos;20 degree celsius;ChIP-chip"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","3172","worm/EMBRYO_FAX_WIG/EMB_0hr_ref_array","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;N2;Mixed stage of Embryos;20 degree celsius;reference (early embryo);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","3173","worm/EMBRYO_FAX_WIG/EMB_AVE_neurons","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;NC1750;Mixed stage of Embryos;20 degree celsius;embryo-AVE;RNA-tiling-array"
"ChIP-chip","H3K27me1","Histone Modification","Lieb, J.","3179","worm/LIEB_WIG_CHIPCHIP_H3K27/UP07448_H3K27ME124439_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K27me1;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K27me1","Histone Modification","Lieb, J.","3180","worm/LIEB_WIG_CHIPCHIP_H3K27/TJ00001_H3K27ME18835_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K27me1;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H4K8ac","Histone Modification","Lieb, J.","3181","worm/LIEB_WIG_CHIPCHIP_H4/AB15823_H4K8AC487128_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H4K8ac;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H4K16ac","Histone Modification","Lieb, J.","3182","worm/LIEB_WIG_CHIPCHIP_H4/MP07329_H4K16ACDAM1612187_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H4K16ac;Early Embryos;20 degree celsius;ChIP-chip"
"RNA-seq","small-RNA","small RNA","Lai, E.","3190","fly/V007.sam.gz.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Canton S;Adult Female;Female heads;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3190","fly/Lai_RNASEQ_DUAL_T/CantonSAdultFemaleHeadHeatShocked","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Canton S;Adult Female;Female heads;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3193","fly/Lai_RNASEQ_DUAL_CELLS/ML-DmD21_BS88","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmD21;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3193","fly/V027.sam.gz.bam.sorted","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmD21;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3195","fly/V013.sam.gz.bam.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Canton S;Adult Female;Female heads;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3195","fly/Lai_RNASEQ_DUAL_T/CantonSAdultFemaleHeadAged","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Canton S;Adult Female;Female heads;RNA-seq"
"ChIP-chip","H4K20me1","Histone Modification","Lieb, J.","3196","worm/LIEB_WIG_CHIPCHIP_H4/DISN147_H4K20ME1001_N2_LTEMB","Histone modification and replacement","data set","Late Embryos","C. elegans","H4K20me1;Late Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","Lieb, J.","3197","worm/LIEB_WIG_CHIPCHIP_H3K4/H3K4ME3_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K4me3;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K4me2","Histone Modification","Lieb, J.","3198","worm/LIEB_WIG_CHIPCHIP_H3K4/H3K4ME2_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K4me2;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K4me2","Histone Modification","Lieb, J.","3199","worm/LIEB_WIG_CHIPCHIP_H3K4/MP07030_H3K4ME2DAM1570816_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K4me2;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","Lieb, J.","3200","worm/LIEB_WIG_CHIPCHIP_H3K27/WA30634849_H3K27AC_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K27ac;Early Embryos;20 degree celsius;ChIP-chip"
"CNV-seq","Replication-Copy-Number","Copy Number Variation","MacAlpine, D.","3201","fly/MacAlpine_CNV/Cl8","Copy Number Variation","data set","Larvae 3rd instar","D. melanogaster","Replication-Copy-Number;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;CNV-seq"
"ChIP-chip","H3K79me1","Histone Modification","Lieb, J.","3202","worm/LIEB_WIG_CHIPCHIP_H3K79/AB2886_H3K79ME1361912_N2_MXEMB","Histone modification and replacement","data set","Mixed Embryos","C. elegans","H3K79me1;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K27me1","Histone Modification","Lieb, J.","3203","worm/LIEB_WIG_CHIPCHIP_H3K27/UP07448_H3K27ME124439_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K27me1;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K79me2","Histone Modification","Lieb, J.","3204","worm/LIEB_WIG_CHIPCHIP_H3K79/AB3594_H3K79ME2346021_N2_MXEMB","Histone modification and replacement","data set","Mixed Embryos","C. elegans","H3K79me2;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K36me1","Histone Modification","Lieb, J.","3205","worm/LIEB_WIG_CHIPCHIP_H3K36/AB9048_H3K36ME1206009_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K36me1;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3","Histone Modification","Lieb, J.","3206","worm/LIEB_WIG_CHIPCHIP_COREHIS/AB1791_H3_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3;N2;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-seq","W03F9.2","Transcriptional Factor","Snyder, M.","3217","worm/SNYDER_ANTIGFP_CHIPCHIP_W03F9","TF binding sites","data set","L4-Young Adult stage larvae","C. elegans","W03F9.2;OP215;L4-Young Adult stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","ZAG-1","Transcriptional Factor","Snyder, M.","3220","worm/SNYDER_ANTIGFP_CHIPCHIP_ZAG1/ZAG1_GFP_L2","TF binding sites","data set","Larvae L2 stage","C. elegans","ZAG-1;OP83;Larvae L2 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","CES-1","Transcriptional Factor","Snyder, M.","3221","worm/SNYDER_ANTIGFP_CHIPCHIP_CES1/CES1_GFP_L4","TF binding sites","data set","Larvae L4 stage","C. elegans","CES-1;OP174;Larvae L4 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","UNC-62","Transcriptional Factor","Snyder, M.","3222","worm/SNYDER_ANTIGFP_CHIPCHIP_UNC62/UNC62_GFP_L3","TF binding sites","data set","Larvae L3 stage","C. elegans","UNC-62;OP600;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","NHR-28","Transcriptional Factor","Snyder, M.","3223","worm/SNYDER_ANTIGFP_CHIPCHIP_NHR28/NHR28_GFP_L4","TF binding sites","data set","Larvae L4 stage","C. elegans","NHR-28;OP317;Larvae L4 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","FOS-1","Transcriptional Factor","Snyder, M.","3224","worm/SNYDER_ANTIGFP_CHIPCHIP_FOS1/FOS1_GFP_L2","TF binding sites","data set","Larvae L2 stage","C. elegans","FOS-1;OP304;Larvae L2 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","dfd","Transcriptional Factor","White, K.","3229","fly/White_CS_SG_TRANSFACT/10T-E16-24h_GFP","TF binding sites","data set","Embryos 16-24 hr","D. melanogaster","dfd;10T-DFD-GFP;Embryos 16-24 hr;ChIP-seq"
"ChIP-seq","dfd","Transcriptional Factor","White, K.","3230","fly/White_CS_SG_TRANSFACT/10T-W3L_GFP","TF binding sites","data set","Larvae L3 stage","D. melanogaster","dfd;10T-DFD-GFP;Larvae L3 stage;ChIP-seq"
"ChIP-seq","Caudal","Transcriptional Factor","White, K.","3231","fly/White_CS_SG_GAP/7T_3dFemale","TF binding sites","data set","Adult Female 3 days","D. melanogaster","Caudal;7T-CAD;Adult Female 3 days;ChIP-seq"
"ChIP-seq","Sin3A","Transcriptional Factor","White, K.","3232","fly/White_CS_SG_CHROMISOL/Sin3A","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","Sin3A;Embryos 0-12 hr;ChIP-seq"
"ChIP-seq","nejire","Transcriptional Factor","White, K.","3233","fly/White_CS_SG_NAJIRE/E0-4_CBP","TF binding sites","data set","Embryos 0-4 hr","D. melanogaster","nejire;Embryos 0-4 hr;ChIP-seq"
"ChIP-seq","tll","Transcriptional Factor","White, K.","3234","fly/White_CS_SG_HOMEOTIC/E0-4_GFP_tll","TF binding sites","data set","Embryos 0-4 hr","D. melanogaster","tll;Embryos 0-4 hr;ChIP-seq"
"ChIP-seq","Disco","Transcriptional Factor","White, K.","3235","fly/White_CS_SG_PRONEUR","TF binding sites","data set","Embryos 0-8 hr","D. melanogaster","Disco;Embryos 0-8 hr;ChIP-seq"
"ChIP-seq","dfd","Transcriptional Factor","White, K.","3236","fly/White_CS_SG_HOMEOTIC/E0-8_GFP_Dfd","TF binding sites","data set","Embryos 0-8 hr","D. melanogaster","dfd;Embryos 0-8 hr;ChIP-seq"
"ChIP-seq","PCL","Transcriptional Factor","White, K.","3237","fly/White_CS_SG_POLYCOMB","TF binding sites","data set","Embryos 0-8 hr","D. melanogaster","PCL;Embryos 0-8 hr;ChIP-seq"
"ChIP-seq","GAF","Transcriptional Factor","White, K.","3238","fly/White_CS_SG_TRITHORAX","TF binding sites","data set","Embryos 16-24 hr","D. melanogaster","GAF;Embryos 16-24 hr;ChIP-seq"
"ChIP-seq","eve","Transcriptional Factor","White, K.","3239","fly/White_CS_SG_HOMEOTIC/E1-6_GFP_eve","TF binding sites","data set","Embryos 1-6 hr","D. melanogaster","eve;Embryos 1-6 hr;ChIP-seq"
"ChIP-seq","CG8478","Transcriptional Factor","White, K.","3240","fly/White_CS_SG_TRANSFACT/E8-16_CG8478","TF binding sites","data set","Embryos 8-16 hr","D. melanogaster","CG8478;Embryos 8-16 hr;ChIP-seq"
"ChIP-seq","Huckebein","Transcriptional Factor","White, K.","3242","fly/White_CS_SG_GAP/E8-16_hkb","TF binding sites","data set","Embryos 8-16 hr","D. melanogaster","Huckebein;Embryos 8-16 hr;ChIP-seq"
"ChIP-seq","KNI","Transcriptional Factor","White, K.","3243","fly/White_CS_SG_TRANSFACT/E8-16_kni","TF binding sites","data set","Embryos 8-16 hr","D. melanogaster","KNI;Embryos 8-16 hr;ChIP-seq"
"ChIP-seq","ORC2","DNA Replication","MacAlpine, D.","3247","fly/MacAlpine_CHIPSEQ_TISSUES/Overnight_embryo_ORC","Replication","data set","Mixed Embryos 0-24 hr","D. melanogaster","ORC2;Mixed Embryos 0-24 hr;ChIP-seq"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","3248","fly/EMBRYO_SG7b_Total","RNA expression profiling","data set","Embryos 4-6 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 4-6 hr;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Celniker, S.","3250","fly/EMBRYO_SG7b_polyA","RNA expression profiling","data set","Embryos 4-6 hr","D. melanogaster","total-RNA;Y cn bw sp;Embryos 4-6 hr;RNA-tiling-array"
"ChIP-seq","pol2","Transcriptional Factor","MacAlpine, D.","3251","fly/MacAlpine_CHIPSEQ_TISSUES/Overnight_embryo_PolII","TF binding sites","data set","Mixed Embryos 0-24 hr","D. melanogaster","pol2;Mixed Embryos 0-24 hr;ChIP-seq"
"ChIP-seq","ORC2","DNA Replication","MacAlpine, D.","3253","fly/MacAlpine_CHIPSEQ_TISSUES/Salivary_Gland_ORC","Replication","data set","L3 stage wandering stage larvae","D. melanogaster","ORC2;SuUR - Orr-Weaver;L3 stage wandering stage larvae;salivary glands;ChIP-seq"
"ChIP-seq","UNC-62","Transcriptional Factor","Snyder, M.","3254","worm/SNYDER_ANTIGFP_CHIPCHIP_UNC62/UNC62_GFP_L2","TF binding sites","data set","Larvae L2 stage","C. elegans","UNC-62;OP600;Larvae L2 stage;20 degree celsius;ChIP-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3255","fly/1182-4H.sub_3255.bam","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;1182-4H;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3256","fly/ML-DmD16-c3.sub_3256.bam","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD16-c3;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3257","fly/ML-DmD9.sub_3257.bam","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD9;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3258","fly/ML-DmD8.sub_3258.bam","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD8;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3259","fly/ML-DmD32.sub_3259.bam","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD32;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3260","fly/GM2.sub_3260.bam","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;GM2;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3261","fly/ML-DmD21.sub_3261.bam","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD21;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3262","fly/BG2c2.sub_3262.bam","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmBG2-c2;Larvae 3rd instar;CNS-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3263","fly/Kc167.sub_3263.bam","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3264","fly/CME_W2.sub_3264.bam","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;CME W2;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3265","fly/MBN2.sub_3265.bam","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;Mbn2;Late Embryonic stage;embryonic/larval hemocyte;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3266","fly/S1.sub_3266.bam","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;S1;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3267","fly/S2Rplus.sub_3267.bam","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;S2R+;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3268","fly/ML-DmD17-c3.sub_3268.bam","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD17-c3;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3270","fly/ML-DmD11.sub_3270.bam","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD11;Larvae 3rd instar;eye-antenna disc-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3271","fly/ML-DmD4-c1.sub_3271.bam","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD4-c1;Larvae 3rd instar;imaginal disc-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3272","fly/ML-DmBG1-c1.sub_3272.bam","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmBG1-c1;Larvae 3rd instar;CNS-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3273","fly/S3.sub_3273.bam","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;S3;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3274","fly/ML-DMD20-c5.sub_3274.bam","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD20-c5;Larvae 3rd instar;antenna disc-derived cell-line;RNA-seq"
"DNA-seq","Nucleosome","Chromatin Structure","Lieb, J.","3276","worm/LiebNUCL/Lieb_Mononucleosomes_DH245_AD","Chromatin structure","data set","Germline containing young adult","C. elegans","Nucleosome;fem-2(b245);Germline containing young adult;20 degree celsius;DNA-seq"
"ChIP-seq","Replication-Copy-Number","DNA Replication","MacAlpine, D.","3277","fly/MacAlpine_CNV_TISSUES/Fatbody_CGH","Replication","data set","L3 stage wandering stage larvae","D. melanogaster","Replication-Copy-Number;Oregon-R;L3 stage wandering stage larvae;fat body;ChIP-seq"
"ChIP-seq","Replication-Copy-Number","DNA Replication","MacAlpine, D.","3278","fly/MacAlpine_CNV_TISSUES/Midgut_CGH","Replication","data set","L3 stage wandering stage larvae","D. melanogaster","Replication-Copy-Number;Oregon-R;L3 stage wandering stage larvae;midgut;ChIP-seq"
"ChIP-chip","ASH-1","Non TF Chromatin binding factor","Karpen, G.","3279","fly/KARPEN_CHIPCHIP_HISMODENZ_BG3/ASH1Q4177.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","ASH-1;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","CTCF","Non TF Chromatin binding factor","Karpen, G.","3280","fly/KARPEN_CHIPCHIP_INS_BG3/CTCF.BG3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","CTCF;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","CTCF","Non TF Chromatin binding factor","Karpen, G.","3281","fly/KARPEN_CHIPCHIP_INS_S2/CTCF.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","CTCF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H2AV","Histone Modification","Karpen, G.","3282","fly/KARPEN_CHIPCHIP_HVARS_KC/H2AV_9751.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H2AV;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H2BK5ac","Histone Modification","Karpen, G.","3283","fly/KARPEN_CHIPCHIP_HVARS_S2/H2BK5ac.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H2BK5ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H2Bubi","Histone Modification","Karpen, G.","3284","fly/KARPEN_CHIPCHIP_HVARS_L3/H2B-ubiq_NRO3.D.mel3rdInstarLarvaeNuclei","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H2Bubi;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","H4K20me1","Histone Modification","Karpen, G.","3285","fly/KARPEN_CHIPCHIP_HISMODS_H4_OR","Histone modification and replacement","data set","Embryos 14-16 hr OR","D. melanogaster","H4K20me1;Oregon-R;Embryos 14-16 hr OR;ChIP-chip"
"ChIP-chip","H4K20me1","Histone Modification","Karpen, G.","3286","fly/KARPEN_CHIPCHIP_HISMODS_H4_BG3/H4K20me_2ndlot.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H4K20me1;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H4K20me1","Histone Modification","Karpen, G.","3287","fly/KARPEN_CHIPCHIP_HISMODS_H4_KC/H4K20me_2ndlot.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H4K20me1;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H4K8ac","Histone Modification","Karpen, G.","3288","fly/KARPEN_CHIPCHIP_HISMODS_H4_CL8/H4K8ac.Clone_8","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H4K8ac;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip"
"ChIP-chip","H4K8ac","Histone Modification","Karpen, G.","3289","fly/KARPEN_CHIPCHIP_HISMODS_H4_KC/H4K8ac.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H4K8ac;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","HP1b","Non TF Chromatin binding factor","Karpen, G.","3290","fly/KARPEN_CHIPCHIP_CHROMPROT_OR/HP1bQ4114.14-16hrORembryo","Other chromatin binding sites","data set","Embryos 14-16 hr OR","D. melanogaster","HP1b;Oregon-R;Embryos 14-16 hr OR;ChIP-chip"
"ChIP-chip","HP1c","Non TF Chromatin binding factor","Karpen, G.","3291","fly/KARPEN_CHIPCHIP_CHRPROT_S2/HP1cQ4064.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","HP1c;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","JIL-1","Non TF Chromatin binding factor","Karpen, G.","3292","fly/KARPEN_CHIPCHIP_DOSCOMP_L3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","JIL-1;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","MSL-1","Non TF Chromatin binding factor","Karpen, G.","3293","fly/KARPEN_CHIPCHIP_DOSCOMP_S2/MSL-1_Q4453.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","MSL-1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","POF","Non TF Chromatin binding factor","Karpen, G.","3294","fly/KARPEN_CHIPCHIP_CHRPROT_S2/POF.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","POF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","Karpen, G.","3295","fly/KARPEN_CHIPCHIP_CHRPROT_S2/RNAPolII_abcam.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","pol2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","RPD3","Non TF Chromatin binding factor","Karpen, G.","3296","fly/KARPEN_CHIPCHIP_HISMODENZ_KC/RPD3-Q3451.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","RPD3;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Su(var)3-7","Non TF Chromatin binding factor","Karpen, G.","3297","fly/KARPEN_CHIPCHIP_HISMODENZ_OR","Other chromatin binding sites","data set","Embryos 14-16 hr OR","D. melanogaster","Su(var)3-7;Oregon-R;Embryos 14-16 hr OR;ChIP-chip"
"ChIP-chip","H1","Histone Modification","Karpen, G.","3299","fly/KARPEN_CHIPCHIP_HVARS_BG3/H1.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H1;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H1","Histone Modification","Karpen, G.","3300","fly/KARPEN_CHIPCHIP_HVARS_S2/H1.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3","Histone Modification","Karpen, G.","3302","fly/KARPEN_CHIPCHIP_HVARS_BG3/H3antibody3.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H4","Histone Modification","Karpen, G.","3303","fly/KARPEN_CHIPCHIP_HVARS_BG3/H4.BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H4;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H4","Histone Modification","Karpen, G.","3304","fly/KARPEN_CHIPCHIP_HVARS_S2/H4.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H4;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"RNA-seq","small-RNA","small RNA","Lai, E.","3307","fly/Lai_GM2.sorted","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;GM2;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3307","fly/Lai_RNASEQ_DUAL_CELLS/GM2cells","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;GM2;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3309","fly/Lai_RNASEQ_DUAL_CELLS/ML-DmD16c3","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmD16-c3;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3309","fly/V034.sam.gz.bam.sorted","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmD16-c3;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3310","fly/Lai_RNASEQ_DUAL_CELLS/MLDmD20c5","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmD20-c5;Larvae 3rd instar;antenna disc-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3310","fly/Lai_ML-DmD20c5.sorted","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmD20-c5;Larvae 3rd instar;antenna disc-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3311","fly/Lai_RNASEQ_DUAL_CELLS/S1","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S1;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3311","fly/V032.sam.gz.bam.sorted","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S1;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3314","fly/Lai_r2d2_ovary","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;r2d2 1;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3314","fly/Lai_RNASEQ_DUAL_T/r2d2_ovaries_totalRNA","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;r2d2 1;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3315","fly/Lai_ago2_ovary.sorted","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Ago2 414;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3315","fly/Lai_RNASEQ_DUAL_T/Ago2-414_ovaries_total_RNA","RNA expression profiling","data set","Adult Female","D. melanogaster","small-RNA;Ago2 414;Adult Female;Adult ovaries;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3317","fly/submission_3317.sorted","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3318","fly/V014.sam.gz.bam.sorted","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-HDR;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3318","fly/Lai_RNASEQ_DUAL_CELLS/S2-DRSC_DTT-4h","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-HDR;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"ChIP-chip","H3K79me1","Histone Modification","Lieb, J.","3320","worm/LIEB_WIG_CHIPCHIP_H3K79/AB2886_H3K79ME1_361912_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K79me1;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K79me2","Histone Modification","Lieb, J.","3321","worm/LIEB_WIG_CHIPCHIP_H3K79/AB3594_H3K79ME2346021_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K79me2;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K79me3","Histone Modification","Lieb, J.","3322","worm/LIEB_WIG_CHIPCHIP_H3K79/AB2621_H3K79ME3_361576_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K79me3;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-seq","ALR-1","Transcriptional Factor","Snyder, M.","3330","worm/Snyder_ANTIGFP_ALR1_RECALL","TF binding sites","data set","Larvae L2 stage","C. elegans","ALR-1;20 degree celsius;OP200;Larvae L2 stage;ChIP-seq"
"ChIP-seq","EGL-27","Transcriptional Factor","Snyder, M.","3335","worm/Snyder_ANTIGFP_EGL27_RECALL","TF binding sites","data set","Fed L1 stage larvae","C. elegans","EGL-27;20 degree celsius;OP177;Fed L1 stage larvae;ChIP-seq"
"ChIP-seq","EGL-5","Transcriptional Factor","Snyder, M.","3336","worm/SNYDER_ANTIGFP_EGL5_RECALL","TF binding sites","data set","Larvae L3 stage","C. elegans","EGL-5;20 degree celsius;OP54;Larvae L3 stage;ChIP-seq"
"ChIP-seq","ELT-3","Transcriptional Factor","Snyder, M.","3337","worm/SNYDER_ANTIGFP_ELT3_RECALL","TF binding sites","data set","Fed L1 stage larvae","C. elegans","ELT-3;20 degree celsius;OP75;Fed L1 stage larvae;ChIP-seq"
"ChIP-seq","EOR-1","Transcriptional Factor","Snyder, M.","3338","worm/SNYDER_ANTIGFP_EOR1_RECALL","TF binding sites","data set","Larvae L3 stage","C. elegans","EOR-1;20 degree celsius;OP81;Larvae L3 stage;ChIP-seq"
"ChIP-seq","GEI-11","Transcriptional Factor","Snyder, M.","3339","worm/SNYDER_ANTIGFP_GEI11_RECALL","TF binding sites","data set","Larvae L4 stage","C. elegans","GEI-11;20 degree celsius;OP179;Larvae L4 stage;ChIP-seq"
"ChIP-seq","HLH-1","Transcriptional Factor","Snyder, M.","3340","worm/SNYDER_ANTIGFP_HLH1_RECALL","TF binding sites","data set","Embryos","C. elegans","HLH-1;20 degree celsius;OP64;Embryos;ChIP-seq"
"ChIP-seq","LIN-11","Transcriptional Factor","Snyder, M.","3341","worm/SNYDER_ANTIGFP_LIN11_RECALL","TF binding sites","data set","Larvae L2 stage","C. elegans","LIN-11;20 degree celsius;OP62;Larvae L2 stage;ChIP-seq"
"ChIP-seq","LIN-13","Transcriptional Factor","Snyder, M.","3342","worm/Snyder_ANTIGFP_LIN13_RECALL","TF binding sites","data set","Embryos","C. elegans","LIN-13;20 degree celsius;OP51;Embryos;ChIP-seq"
"ChIP-seq","LIN-15","Transcriptional Factor","Snyder, M.","3343","worm/SNYDER_ANTIGFP_LIN15B_RECALL","TF binding sites","data set","Larvae L3 stage","C. elegans","LIN-15;20 degree celsius;OP184;Larvae L3 stage;ChIP-seq"
"ChIP-seq","LIN-39","Transcriptional Factor","Snyder, M.","3344","worm/SNYDER_ANTIGFP_LIN39_RECALL","TF binding sites","data set","Larvae L3 stage","C. elegans","LIN-39;20 degree celsius;OP18;Larvae L3 stage;ChIP-seq"
"ChIP-seq","MAB-5","Transcriptional Factor","Snyder, M.","3345","worm/Snyder_ANTIGFP_COMB_MAB5_RECALL","TF binding sites","data set","Larvae L3 stage","C. elegans","MAB-5;20 degree celsius;OP26;Larvae L3 stage;ChIP-seq"
"ChIP-seq","MDL-1","Transcriptional Factor","Snyder, M.","3346","worm/Snyder_ANTIGFP_MDL1_RECALL","TF binding sites","data set","Fed L1 stage larvae","C. elegans","MDL-1;20 degree celsius;OP106;Fed L1 stage larvae;ChIP-seq"
"ChIP-seq","MEP-1","Transcriptional Factor","Snyder, M.","3347","worm/Snyder_ANTIGFP_MEP1_RECALL","TF binding sites","data set","Embryos","C. elegans","MEP-1;20 degree celsius;OP70;Embryos;ChIP-seq"
"ChIP-seq","PES-1","Transcriptional Factor","Snyder, M.","3348","worm/Snyder_ANTIGFP_PES1_RECALL","TF binding sites","data set","Larvae L4 stage","C. elegans","PES-1;20 degree celsius;OP87;Larvae L4 stage;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","3349","worm/Snyder_PHA4_RECALL","TF binding sites","data set","Embryos","C. elegans","PHA-4;20 degree celsius;OP37;Embryos;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","3350","worm/Snyder_PHA4_RECALL","TF binding sites","data set","Fed L1 stage larvae","C. elegans","PHA-4;20 degree celsius;OP37;Fed L1 stage larvae;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","3351","worm/Snyder_PHA4_RECALL","TF binding sites","data set","Larvae L2 stage","C. elegans","PHA-4;20 degree celsius;OP37;Larvae L2 stage;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","3352","worm/Snyder_PHA4_RECALL","TF binding sites","data set","Late Embryos","C. elegans","PHA-4;20 degree celsius;OP37;Late Embryos;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","3353","worm/Snyder_PHA4_RECALL","TF binding sites","data set","Starved L1 stage larvae","C. elegans","PHA-4;20 degree celsius;OP37;Starved L1 stage larvae;ChIP-seq"
"ChIP-seq","PHA-4","Transcriptional Factor","Snyder, M.","3354","worm/Snyder_PHA4_RECALL","TF binding sites","data set","Young Adult","C. elegans","PHA-4;20 degree celsius;OP37;Young Adult;ChIP-seq"
"ChIP-seq","PQM-1","Transcriptional Factor","Snyder, M.","3355","worm/Snyder_ANTIGFP_PQM1_RECALL","TF binding sites","data set","Larvae L3 stage","C. elegans","PQM-1;20 degree celsius;OP201;Larvae L3 stage;ChIP-seq"
"ChIP-seq","SKN-1","Transcriptional Factor","Snyder, M.","3356","worm/Snyder_ANTIGFP_COMB_SKN1_RECALL","TF binding sites","data set","Fed L1 stage larvae","C. elegans","SKN-1;20 degree celsius;OP178;Fed L1 stage larvae;ChIP-seq"
"ChIP-seq","UNC-130","Transcriptional Factor","Snyder, M.","3357","worm/Snyder_ANTIGFP_UNC130_RECALL","TF binding sites","data set","Fed L1 stage larvae","C. elegans","UNC-130;20 degree celsius;OP77;Fed L1 stage larvae;ChIP-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3358","fly/submission_3358.sorted","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3359","fly/submission_3359.sorted","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3360","fly/submission_3360.sorted","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"ChIP-chip","ZFP-1","Non TF Chromatin binding factor","Lieb, J.","3361","worm/LIEB_WIG_CHIPCHIP_CHR_ZFP1/JL00006_ZFP1_RB774_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","ZFP-1;Mixed Embryos;20 degree celsius;ChIP-chip"
"integrated-gene-model","chromatin-state","Histone Modification","Karpen, G.","3362","fly/9STATE_BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","chromatin-state;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;integrated-gene-model"
"integrated-gene-model","chromatin-state","Histone Modification","Karpen, G.","3363","fly/9STATE_S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","chromatin-state;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;integrated-gene-model"
"integrated-gene-model","chromatin-state","Histone Modification","Karpen, G.","3364","fly/30STATE_BG3","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","chromatin-state;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;integrated-gene-model"
"integrated-gene-model","chromatin-state","Histone Modification","Karpen, G.","3365","fly/30STATE_S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","chromatin-state;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;integrated-gene-model"
"ChIP-seq","C01B12.2","Transcriptional Factor","Snyder, M.","3371","worm/SNYDER_ANTIGFP_CHIPCHIP_C01B12","TF binding sites","data set","Larvae L2 stage","C. elegans","C01B12.2;OP343;Larvae L2 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","EOR-1","Transcriptional Factor","Snyder, M.","3372","worm/SNYDER_ANTIGFP_CHIPCHIP_EOR1/EOR1_GFP_L3_2","TF binding sites","data set","Larvae L3 stage","C. elegans","EOR-1;OP81;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","EOR-1","Transcriptional Factor","Snyder, M.","3372","worm/SNYDER_ANTIGFP_EOR1_RECALL","TF binding sites","data set","Larvae L3 stage","C. elegans","EOR-1;OP81;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","NHR-6","Transcriptional Factor","Snyder, M.","3374","worm/Snyder_ANTIGFP_WIG_COMB_NHR6v2_L2_GFP","TF binding sites","data set","Larvae L2 stage","C. elegans","NHR-6;OP90;Larvae L2 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","UNC-62","Transcriptional Factor","Snyder, M.","3375","worm/SNYDER_ANTIGFP_CHIPCHIP_UNC62/UNC62_GFP_L1","TF binding sites","data set","Fed L1 stage larvae","C. elegans","UNC-62;OP600;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","ZAG-1","Transcriptional Factor","Snyder, M.","3376","worm/SNYDER_ANTIGFP_CHIPCHIP_ZAG1/ZAG1_GFP_L3","TF binding sites","data set","Larvae L3 stage","C. elegans","ZAG-1;OP83;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","ZAG-1","Transcriptional Factor","Snyder, M.","3377","worm/SNYDER_ANTIGFP_CHIPCHIP_ZAG1/ZAG1_GFP_L1","TF binding sites","data set","Fed L1 stage larvae","C. elegans","ZAG-1;OP83;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","F45C12.2","Transcriptional Factor","Snyder, M.","3378","worm/SNYDER_ANTIGFP_CHIPCHIP_F45C12","TF binding sites","data set","Larvae L3 stage","C. elegans","F45C12.2;OP212;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","DAF-12","Transcriptional Factor","Snyder, M.","3380","worm/SNYDER_ANTIGFP_CHIPCHIP_DAF12/DAF12_GFP_L4","TF binding sites","data set","Larvae L4 stage","C. elegans","DAF-12;OP222;Larvae L4 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","DAF-12","Transcriptional Factor","Snyder, M.","3381","worm/SNYDER_ANTIGFP_CHIPCHIP_DAF12/DAF12_GFP_L3_OP222","TF binding sites","data set","Larvae L3 stage","C. elegans","DAF-12;OP222;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","ALY-2","Transcriptional Factor","Snyder, M.","3382","worm/SNYDER_ANTIGFP_CHIPCHIP_ALY2/ALY2_GFP_L3","TF binding sites","data set","Larvae L3 stage","C. elegans","ALY-2;OP217;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","ALY-2","Transcriptional Factor","Snyder, M.","3384","worm/SNYDER_ANTIGFP_CHIPCHIP_ALY2/ALY2_GFP_L1","TF binding sites","data set","Fed L1 stage larvae","C. elegans","ALY-2;OP217;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-seq","R02D3.7","Transcriptional Factor","Snyder, M.","3385","worm/SNYDER_ANTIGFP_CHIPCHIP_R02D3","TF binding sites","data set","Larvae L2 stage","C. elegans","R02D3.7;OP218;Larvae L2 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","NHR-28","Transcriptional Factor","Snyder, M.","3386","worm/SNYDER_ANTIGFP_CHIPCHIP_NHR28/NHR28_GFP_L3","TF binding sites","data set","Larvae L3 stage","C. elegans","NHR-28;OP317;Larvae L3 stage;20 degree celsius;ChIP-seq"
"ChIP-seq","FOS-1","Transcriptional Factor","Snyder, M.","3387","worm/SNYDER_ANTIGFP_CHIPCHIP_FOS1/FOS1_GFP_L1","TF binding sites","data set","Fed L1 stage larvae","C. elegans","FOS-1;OP304;Fed L1 stage larvae;20 degree celsius;ChIP-seq"
"ChIP-chip","LEM-2","Non TF Chromatin binding factor","Lieb, J.","3389","worm/LIEB_WIG_CHROMNUC_ENV/SDQ3891_LEM2_SP646_MXEMB","Other chromatin binding sites","data set","Mixed Embryos","C. elegans","LEM-2;SP646;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-seq","Hr39","Transcriptional Factor","White, K.","3390","fly/White_CS_SG_TRANSFACT/E16-24h_Hr39","TF binding sites","data set","Embryos 16-24 hr","D. melanogaster","Hr39;Embryos 16-24 hr;ChIP-seq"
"ChIP-seq","HP1","Transcriptional Factor","White, K.","3391","fly/White_CS_SG_TRANSFACT/E16-24h_HP1_Abcam","TF binding sites","data set","Embryos 16-24 hr","D. melanogaster","HP1;Embryos 16-24 hr;ChIP-seq"
"ChIP-seq","HP1","Transcriptional Factor","White, K.","3392","fly/White_CS_SG_TRANSFACT/E16-24h_HP1_Covance","TF binding sites","data set","Embryos 16-24 hr","D. melanogaster","HP1;Embryos 16-24 hr;ChIP-seq"
"ChIP-seq","bonus","Transcriptional Factor","White, K.","3393","fly/White_CS_SG_TRANSFACT/E16-24h_bon","TF binding sites","data set","Embryos 16-24 hr","D. melanogaster","bonus;Embryos 16-24 hr;ChIP-seq"
"ChIP-seq","Kruppel","Transcriptional Factor","White, K.","3394","fly/White_CS_SG_GAP/E16-24h_Kr-D2","TF binding sites","data set","Embryos 16-24 hr","D. melanogaster","Kruppel;Embryos 16-24 hr;ChIP-seq"
"ChIP-seq","Dichaete","Transcriptional Factor","White, K.","3395","fly/White_CS_SG_TRANSFACT/E0-8h_D","TF binding sites","data set","Embryos 0-8 hr","D. melanogaster","Dichaete;Embryos 0-8 hr;ChIP-seq"
"ChIP-seq","Su(var)3-9","Transcriptional Factor","White, K.","3396","fly/White_CS_SG_TRANSFACT/E0-12h_SuVar3-9","TF binding sites","data set","Embryos 0-12 hr","D. melanogaster","Su(var)3-9;Embryos 0-12 hr;ChIP-seq"
"ChIP-seq","trem","Transcriptional Factor","White, K.","3399","fly/White_CS_SG_TRANSFACT/A.Female_Trem","TF binding sites","data set","Adult Female","D. melanogaster","trem;Adult Female;ChIP-seq"
"ChIP-seq","eve","Transcriptional Factor","White, K.","3400","fly/White_CS_SG_TRANSFACT/R13_E1-6h_Set2","TF binding sites","data set","Embryos 1-6 hr","D. melanogaster","eve;R13-YFP;Embryos 1-6 hr;ChIP-seq"
"ChIP-seq","eve","Transcriptional Factor","White, K.","3401","fly/White_CS_SG_TRANSFACT/5T_8-16_NW_GFP","TF binding sites","data set","Embryos 8-16 hr","D. melanogaster","eve;5T-eve-GFP;Embryos 8-16 hr;ChIP-seq"
"ChIP-seq","Caudal","Transcriptional Factor","White, K.","3403","fly/White_CS_SG_GAP/7T_W3L_GFP","TF binding sites","data set","Larvae L3 stage","D. melanogaster","Caudal;7T-CAD;Larvae L3 stage;ChIP-seq"
"RACE","3-prime-UTR","mRNA","Piano, F.","3404","worm/minipool1.sam.bam.sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RACE","3-prime-UTR","mRNA","Piano, F.","3404","worm/minipool2.sam.bam.sorted","Gene Structure","data set","Mixed Population Worms","C. elegans","3-prime-UTR;N2;Mixed Population Worms;25 degree celsius;RACE"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","3405","worm/PEMBRYO_FAX_WIG/L2_AFD_neurons","RNA expression profiling","data set","Mid-L2 22 hr post-L1 stage larvae","C. elegans","total-RNA;20 degree celsius;IX823;Mid-L2 22 hr post-L1 stage larvae;AFD neurons (L2);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","3406","worm/PEMBRYO_FAX_WIG/L2_GABA_motor_neurons_alr-1","RNA expression profiling","data set","Mid-L2 22 hr post-L1 stage larvae","C. elegans","total-RNA;20 degree celsius;NC2145;Mid-L2 22 hr post-L1 stage larvae;GABA neurons (L2);RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","3407","worm/EMBRYO_FAX_WIG/EMB_malesomaticprecurs_cellZ1-Z4","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;20 degree celsius;DZ683;Mixed stage of Embryos;Z1;RNA-tiling-array"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","3408","worm/EMBRYO_FAX_WIG/EMB_hermsomaticprecurs_cellZ1-Z4","RNA expression profiling","data set","Mixed stage of Embryos","C. elegans","total-RNA;20 degree celsius;DZ685;Mixed stage of Embryos;Somatic gonad precursor cells Z1-Z4 (herm embryo);RNA-tiling-array"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3411","fly/3411_merged.sorted","Gene Structure","data set","Adult, eclosion + 4 days","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult, eclosion + 4 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3412","fly/3412_merged.sorted","Gene Structure","data set","Adult, eclosion + 4 days","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult, eclosion + 4 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3413","fly/3413_merged.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;copper(2+) sulfate;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3414","fly/3414_merged.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;zinc dichloride;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3415","fly/3415_merged.sorted","Gene Structure","data set","Adult mixed-sex flies, eclosion + 4 days","D. melanogaster","total-RNA;copper(2+) sulfate;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3416","fly/3416_merged.sorted","Gene Structure","data set","Adult mixed-sex flies, eclosion + 4 days","D. melanogaster","total-RNA;zinc dichloride;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3417","fly/3417_merged.sorted","Gene Structure","data set","Adult mixed-sex flies, eclosion + 4 days","D. melanogaster","total-RNA;caffeine;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3418","fly/3418_merged.sorted","Gene Structure","data set","Adult mixed-sex flies, eclosion + 4 days","D. melanogaster","total-RNA;cadmium dichloride;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3419","fly/3419_merged.sorted","Gene Structure","data set","Adult mixed-sex flies, eclosion + 4 days","D. melanogaster","total-RNA;caffeine;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3420","fly/3420_merged.sorted","Gene Structure","data set","Adult mixed-sex flies, eclosion + 4 days","D. melanogaster","total-RNA;paraquat;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3421","fly/3421_merged.sorted","Gene Structure","data set","Adult mixed-sex flies, eclosion + 4 days","D. melanogaster","total-RNA;cadmium dichloride;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3422","fly/3422_merged.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;caffeine;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3423","fly/3423_merged.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;rotenone;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3424","fly/3424_merged.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;cadmium dichloride;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3425","fly/3425_merged.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;cadmium dichloride;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3426","fly/3426_merged.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;rotenone;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3427","fly/3427_merged.sorted","Gene Structure","data set","Adult mixed-sex flies, eclosion + 4 days","D. melanogaster","total-RNA;paraquat;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3428","fly/3428_merged.sorted","Gene Structure","data set","Adult, eclosion + 4 days","D. melanogaster","total-RNA;36 degree celsius;Oregon R-modENCODE;Adult, eclosion + 4 days;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3429","fly/3429_merged.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;ethanol;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3430","fly/3430_merged.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;ethanol;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3431","fly/3431_merged.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;ethanol;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq"
"ChIP-chip","AMA-1","Histone Modification","Lieb, J.","3432","worm/LIEB_WIG_CHIPCHIP_POL2/SDQ2357_AMA1_N2_MXEMB","Histone modification and replacement","data set","Mixed Embryos","C. elegans","AMA-1;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H4K20me1","Histone Modification","Lieb, J.","3434","worm/LIEB_WIG_CHIPCHIP_H4/DISN147_H4K20ME1_001_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","H4K20me1;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","DPY-27","Non TF Chromatin binding factor","Lieb, J.","3435","worm/LIEB_WIG_CHIPCHIP_DC/JL00001_DPY27_N2_EEMB","Other chromatin binding sites","data set","Early Embryos","C. elegans","DPY-27;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","HPL-2","Histone Modification","Lieb, J.","3438","worm/LIEB_WIG_CHIPCHIP_CHROMSIL/SDQ2324_HPL2_N2_LTEMB","Histone modification and replacement","data set","Late Embryos","C. elegans","HPL-2;Late Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","LIN-15B","Histone Modification","Lieb, J.","3439","worm/LIEB_WIG_CHIPCHIP_LIN15B","Histone modification and replacement","data set","Late Embryos","C. elegans","LIN-15B;Late Embryos;20 degree celsius;ChIP-chip"
"RNA-tiling-array","total-RNA","mRNA","Waterston, R.","3440","worm/PEMBRYO_FAX_WIG/L3_L4_rectal_epithel_cell","RNA expression profiling","data set","L3-L4 22 hr 23dC 24 hr post-L1 stage larvae","C. elegans","total-RNA;23 degree celsius;CB6845;L3-L4 22 hr 23dC 24 hr post-L1 stage larvae;rectal epithelial cells (L3-L4);RNA-tiling-array"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3442","fly/submission_3442.sorted","Gene Structure","data set","Adult Female, eclosion + 1 day","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult Female, eclosion + 1 day;Female virgin heads;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3443","fly/submission_3443.sorted","Gene Structure","data set","Adult mated female eclosion + 20 days","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult mated female eclosion + 20 days;Mated Female heads;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3444","fly/submission_3444.sorted","Gene Structure","data set","Adult Male, eclosion + 1 day","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult Male, eclosion + 1 day;Male heads;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3445","fly/submission_3445.sorted","Gene Structure","data set","Adult, eclosion + 1 day","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult, eclosion + 1 day;digestive system;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3446","fly/submission_3446.sorted","Gene Structure","data set","Adult, eclosion + 1 day","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult, eclosion + 1 day;carcass;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3447","fly/submission_3447.sorted","Gene Structure","data set","Adult Female, eclosion + 1 day","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult Female, eclosion + 1 day;Female virgin heads;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3448","fly/submission_3448.sorted","Gene Structure","data set","Adult mated female eclosion + 20 days","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult mated female eclosion + 20 days;Mated Female heads;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3449","fly/submission_3449.sorted","Gene Structure","data set","Adult Male, eclosion + 1 day","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult Male, eclosion + 1 day;Male heads;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3450","fly/submission_3450.sorted","Gene Structure","data set","Adult Female, eclosion + 4 days","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult Female, eclosion + 4 days;virgin adult ovaries;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3451","fly/submission_3451.sorted","Gene Structure","data set","Adult mated female eclosion + 4 days","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult mated female eclosion + 4 days;mated adult ovaries;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3452","fly/submission_3452.sorted","Gene Structure","data set","Adult Male, eclosion + 4 days","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult Male, eclosion + 4 days;testes;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3453","fly/submission_3453.sorted","Gene Structure","data set","Adult Male, eclosion + 4 days","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult Male, eclosion + 4 days;male accessory glands;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3454","fly/submission_3454.sorted","Gene Structure","data set","Adult, eclosion + 1 day","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult, eclosion + 1 day;digestive system;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3455","fly/submission_3455.sorted","Gene Structure","data set","Adult, eclosion + 1 day","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult, eclosion + 1 day;carcass;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3456","fly/submission_3456.sorted","Gene Structure","data set","Adult Female, eclosion + 1 day","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult Female, eclosion + 1 day;Female virgin heads;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3457","fly/submission_3457.sorted","Gene Structure","data set","Adult mated female eclosion + 20 days","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult mated female eclosion + 20 days;Mated Female heads;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3458","fly/submission_3458.sorted","Gene Structure","data set","Adult Male, eclosion + 1 day","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult Male, eclosion + 1 day;Male heads;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3459","fly/submission_3459.sorted","Gene Structure","data set","Adult, eclosion + 1 day","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult, eclosion + 1 day;digestive system;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3460","fly/submission_3460.sorted","Gene Structure","data set","Adult, eclosion + 1 day","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult, eclosion + 1 day;carcass;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3461","fly/submission_3461.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;Oregon R-modENCODE;L3 stage wandering stage larvae;fat body;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3462","fly/submission_3462.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;Oregon R-modENCODE;L3 stage wandering stage larvae;imaginal discs;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3463","fly/submission_3463.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;Oregon R-modENCODE;L3 stage wandering stage larvae;salivary glands;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3464","fly/submission_3464.sorted","Gene Structure","data set","Adult, eclosion + 1 day","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult, eclosion + 1 day;digestive system;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3465","fly/submission_3465.sorted","Gene Structure","data set","Adult, eclosion + 1 day","D. melanogaster","total-RNA;Oregon R-modENCODE;Adult, eclosion + 1 day;carcass;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3466","fly/submission_3466.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;Oregon R-modENCODE;L3 stage wandering stage larvae;central nervous system;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3467","fly/submission_3467.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;Oregon R-modENCODE;L3 stage wandering stage larvae;salivary glands;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3468","fly/submission_3468.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;Oregon R-modENCODE;L3 stage wandering stage larvae;fat body;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3469","fly/submission_3469.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;Oregon R-modENCODE;L3 stage wandering stage larvae;central nervous system;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3470","fly/submission_3470.sorted","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","total-RNA;Oregon R-modENCODE;L3 stage wandering stage larvae;fat body;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3471","fly/1182-4H.sub_3471.sorted","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;1182-4H;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3472","fly/CME_W2.sub_3472.merged","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;CME W2;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3473","fly/GM2.sub_3473.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;GM2;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3474","fly/ML-DmBG2-c2.sub_3474.merged","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmBG2-c2;Larvae 3rd instar;CNS-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3475","fly/ML-DmD20-c5.sub_3475.merged","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD20-c5;Larvae 3rd instar;antenna disc-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3476","fly/CME_L1.sub_3476.merged","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;CME-L1;Larvae 3rd instar;ventral prothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3477","fly/ML-DmBG1-c1.sub_3477.sorted","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD17-c3;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3478","fly/ML-DmD11.sub_3478.merged","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD11;Larvae 3rd instar;eye-antenna disc-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3479","fly/ML-DmD16-c3.sub_3479.merged","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD16-c3;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3480","fly/ML-DmD17-c3.sub_3480.merged","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD17-c3;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3481","fly/ML-DmD21.sub_3481.sorted","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD21;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3482","fly/ML-DmD32.sub_3482.merged","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD32;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3483","fly/ML-DmD4-c1.sub_3483.merged","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD4-c1;Larvae 3rd instar;imaginal disc-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3484","fly/ML-DmD8.sub_3484.sorted","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD8;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3485","fly/ML-DmD9.sub_3485.sorted","Gene Structure","data set","Larvae 3rd instar","D. melanogaster","total-RNA;ML-DmD9;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3486","fly/S1.sub_3486.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;S1;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3487","fly/S2Rplus.sub_3487.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;S2R+;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3488","fly/Sg4.sub_3488.sorted","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;Sg4;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3492","fly/MBN2.sub_3492.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;Mbn2;Late Embryonic stage;embryonic/larval hemocyte;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3493","fly/Kc167.sub_3493.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3494","fly/S3.sub_3494.merged","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;S3;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3506","fly/Lai_Sg4.sorted","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;Sg4;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3506","fly/Lai_RNASEQ_DUAL_CELLS/Sg4","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;Sg4;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3508","fly/Lai_ML-DmBG1-C1.sorted","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmBG1-c1;Larvae 3rd instar;CNS-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3508","fly/Lai_RNASEQ_DUAL_CELLS/ML-DmBG1c1","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmBG1-c1;Larvae 3rd instar;CNS-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3510","fly/Lai_RNASEQ_DUAL_CELLS/ML-DmBG3-C2","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3510","fly/Lai_ML-DmBG3-C2.sorted","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3511","fly/Lai_S2-DRSC.sorted","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3511","fly/Lai_RNASEQ_DUAL_CELLS/S2_DRSC","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3512","fly/Lai_RNASEQ_DUAL_CELLS/ML-DmD9","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmD9;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3512","fly/Lai_MLDmD9.sorted","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmD9;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3513","fly/Lai_MLDmD8.sorted","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmD8;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3513","fly/Lai_RNASEQ_DUAL_CELLS/ML-DmD8","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmD8;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3514","fly/Lai_RNASEQ_DUAL_CELLS/ML-DmD32","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmD32;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3514","fly/Lai_MLDmD32.sorted","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;ML-DmD32;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3516","worm/3516.merged.sam.gz.bam.sorted","Gene Structure","data set","Adult Drechmeria coniospora 1 5 hrs","C. elegans","total-RNA;N2;Adult Drechmeria coniospora 1 5 hrs;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3517","worm/3517.merged.sam.gz.bam.sorted","Gene Structure","data set","Adult Drechmeria coniospora 2 12 hrs","C. elegans","total-RNA;N2;Adult Drechmeria coniospora 2 12 hrs;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3519","worm/3519.merged.sam.gz.bam.sorted","Gene Structure","data set","Adult Enterococcus faecalis 1 24 hrs","C. elegans","total-RNA;N2;Adult Enterococcus faecalis 1 24 hrs;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3521","worm/3521.merged.sam.gz.bam.sorted","Gene Structure","data set","L1LIN35-1cap1 stage larvae","C. elegans","total-RNA;N2;L1LIN35-1cap1 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3524","worm/3524.merged.sam.gz.bam.sorted","Gene Structure","data set","Larvae L4MALE6cap2 stage","C. elegans","total-RNA;N2;Larvae L4MALE6cap2 stage;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3526","worm/3526.merged.sam.gz.bam.sorted","Gene Structure","data set","Early Embryos capture EE-2cap5","C. elegans","total-RNA;N2;Early Embryos capture EE-2cap5;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3530","worm/3530.merged.sam.gz.bam.sorted","Gene Structure","data set","N2 L4cap4 stage larvae","C. elegans","total-RNA;N2;N2 L4cap4 stage larvae;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3531","worm/3531.merged.sam.gz.bam.sorted","Gene Structure","data set","N2 LE-2cap6","C. elegans","total-RNA;N2;N2 LE-2cap6;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3533","worm/3533.merged.sam.gz.bam.sorted","Gene Structure","data set","Adult Drechmeria coniospora control EcoliOP50 exposed 2 12 hrs","C. elegans","total-RNA;N2;Adult Drechmeria coniospora control EcoliOP50 exposed 2 12 hrs;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3534","worm/3534.merged.sam.gz.bam.sorted","Gene Structure","data set","Adult Photorhabdus luminescens 2 24 hrs","C. elegans","total-RNA;N2;Adult Photorhabdus luminescens 2 24 hrs;25 degree celsius;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3535","worm/3535.merged.sam.gz.bam.sorted","Gene Structure","data set","N2 L4RRcap3 stage larvae","C. elegans","total-RNA;N2;N2 L4RRcap3 stage larvae;25 degree celsius;RNA-seq"
"ChIP-chip","H3K4me3","Non TF Chromatin binding factor","Karpen, G.","3537","fly/KARPEN_CHIPCHIP_RNAi_BG3/H3K4me3_ab8580lot1.BG3.CTCF_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","H3K4me3;CG8591-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H4K20me1","Histone Modification","Lieb, J.","3538","worm/LIEB_WIG_CHIPCHIP_H4/DISN147_H4K20ME1_001_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H4K20me1;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","pol2","Histone Modification","Lieb, J.","3544","worm/LIEB_WIG_CHIPCHIP_POL2/ABAB817_8WG16_N2_EEMB","Histone modification and replacement","data set","Early Embryos","C. elegans","pol2;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","pol2","Histone Modification","Lieb, J.","3545","worm/LIEB_WIG_CHIPCHIP_POL2/ABAB817_8WG16_N2_LTEMB","Histone modification and replacement","data set","Late Embryos","C. elegans","pol2;Late Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","Lieb, J.","3546","worm/LIEB_WIG_CHIPCHIP_H3K4/WA30534819_H3K4ME3_N2_EEMB_s1","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K4me3;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","Lieb, J.","3547","worm/LIEB_WIG_CHIPCHIP_H3K4/WA30534819_H3K4ME3_N2_LTEMB_s2","Histone modification and replacement","data set","Late Embryos","C. elegans","H3K4me3;Late Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","Lieb, J.","3548","worm/LIEB_WIG_CHIPCHIP_H3K4/WA30534819_H3K4ME3_N2_L1_s3","Histone modification and replacement","data set","Larvae L1 stage","C. elegans","H3K4me3;Larvae L1 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","Lieb, J.","3549","worm/LIEB_WIG_CHIPCHIP_H3K4/WA30534819_H3K4ME3_N2_L2_s4","Histone modification and replacement","data set","Larvae L2 stage","C. elegans","H3K4me3;Larvae L2 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","Lieb, J.","3550","worm/LIEB_WIG_CHIPCHIP_H3K4/WA30534819_H3K4ME3_N2_L3_s5","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K4me3;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","Lieb, J.","3551","worm/LIEB_WIG_CHIPCHIP_H3K4/WA30534819_H3K4ME3_N2_L4_s6","Histone modification and replacement","data set","Larvae L4 stage","C. elegans","H3K4me3;Larvae L4 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","Lieb, J.","3552","worm/LIEB_WIG_CHIPCHIP_H3K4/WA30534819_H3K4ME3_N2_YA_s7","Histone modification and replacement","data set","Germline containing young adult","C. elegans","H3K4me3;Germline containing young adult;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Lieb, J.","3553","worm/LIEB_WIG_CHIPCHIP_H3K36/HK00001_H3K36ME3_13C9_N2_EEMB_s1","Histone modification and replacement","data set","Early Embryos","C. elegans","H3K36me3;Early Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Lieb, J.","3554","worm/LIEB_WIG_CHIPCHIP_H3K36/HK00001_H3K36ME3_13C9_N2_LTEMB_s2","Histone modification and replacement","data set","Late Embryos","C. elegans","H3K36me3;Late Embryos;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Lieb, J.","3555","worm/LIEB_WIG_CHIPCHIP_H3K36/HK00001_H3K36ME3_13C9_N2_L1_s3","Histone modification and replacement","data set","Larvae L1 stage","C. elegans","H3K36me3;Larvae L1 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Lieb, J.","3556","worm/LIEB_WIG_CHIPCHIP_H3K36/HK00001_H3K36ME3_13C9_N2_L2_s4","Histone modification and replacement","data set","Larvae L2 stage","C. elegans","H3K36me3;Larvae L2 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Lieb, J.","3557","worm/LIEB_WIG_CHIPCHIP_H3K36/HK00001_H3K36ME3_13C9_N2_L3_s5","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K36me3;Larvae L3 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Lieb, J.","3558","worm/LIEB_WIG_CHIPCHIP_H3K36/HK00001_H3K36ME3_13C9_N2_L4_s6","Histone modification and replacement","data set","Larvae L4 stage","C. elegans","H3K36me3;Larvae L4 stage;20 degree celsius;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Lieb, J.","3559","worm/LIEB_WIG_CHIPCHIP_H3K36/HK00001_H3K36ME3_13C9_N2_YA_s7","Histone modification and replacement","data set","Germline containing young adult","C. elegans","H3K36me3;Germline containing young adult;20 degree celsius;ChIP-chip"
"ChIP-chip","ZFP-1","Histone Modification","Lieb, J.","3561","worm/LIEB_WIG_CHIPCHIP_CHR_ZFP1/SDQ3517_ZFP1_N2_MXEMB","Histone modification and replacement","data set","Mixed Embryos","C. elegans","ZFP-1;Mixed Embryos;20 degree celsius;ChIP-chip"
"ChIP-seq","H3","Histone Modification","Lieb, J.","3562","worm/LIEB_WIG_CHIPSEQ_COREHIS","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3;20 degree celsius;N2;Larvae L3 stage;ChIP-seq"
"ChIP-seq","trimethylated Lys-36 of H3","Histone Modification","Lieb, J.","3563","worm/LIEB_WIG_CHIPSEQ_H3K36","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","trimethylated Lys-36 of H3;20 degree celsius;Larvae L3 stage;ChIP-seq"
"ChIP-seq","LIN-52","Histone Modification","Lieb, J.","3565","worm/LIEB_WIG_CHIPSEQ_TF/BH00001_LIN52_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","LIN-52;20 degree celsius;N2;Larvae L3 stage;ChIP-seq"
"ChIP-seq","LIN-37","Histone Modification","Lieb, J.","3566","worm/LIEB_WIG_CHIPSEQ_TF/BH00003_LIN37_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","LIN-37;20 degree celsius;Larvae L3 stage;ChIP-seq"
"ChIP-seq","LIN-54","Histone Modification","Lieb, J.","3567","worm/LIEB_WIG_CHIPSEQ_TF/BH00004_LIN54_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","LIN-54;20 degree celsius;Larvae L3 stage;ChIP-seq"
"ChIP-seq","LIN-9","Histone Modification","Lieb, J.","3568","worm/LIEB_WIG_CHIPSEQ_TF/BH00005_LIN9_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","LIN-9;20 degree celsius;Larvae L3 stage;ChIP-seq"
"ChIP-seq","LIN-35","Histone Modification","Lieb, J.","3570","worm/LIEB_WIG_CHIPSEQ_TF/JA00011_LIN35_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","LIN-35;20 degree celsius;Larvae L3 stage;ChIP-seq"
"ChIP-seq","DPY-27","Non TF Chromatin binding factor","Lieb, J.","3571","worm/LIEB_WIG_CHIPSEQ_DC","Other chromatin binding sites","data set","Larvae L3 stage","C. elegans","DPY-27;20 degree celsius;Larvae L3 stage;ChIP-seq"
"ChIP-seq","H4acTetra","Histone Modification","Lieb, J.","3572","worm/LIEB_WIG_CHIPSEQ_H4","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H4acTetra;20 degree celsius;Larvae L3 stage;ChIP-seq"
"ChIP-seq","EPC-1","Histone Modification","Lieb, J.","3573","worm/LIEB_WIG_CHIPSEQ_POLYCOMB","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","EPC-1;20 degree celsius;Larvae L3 stage;ChIP-seq"
"ChIP-seq","DPL-1","Histone Modification","Lieb, J.","3575","worm/LIEB_WIG_CHIPSEQ_TF/SDQ3599_DPL1_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","DPL-1;20 degree celsius;Larvae L3 stage;ChIP-seq"
"ChIP-seq","H3K4me3","Histone Modification","Lieb, J.","3576","worm/LIEB_WIG_CHIPSEQ_H3K4","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","H3K4me3;20 degree celsius;Larvae L3 stage;ChIP-seq"
"ChIP-seq","EFL-1","Histone Modification","Lieb, J.","3577","worm/LIEB_WIG_CHIPSEQ_TF/SDQ3590_EFL1_N2_L3","Histone modification and replacement","data set","Larvae L3 stage","C. elegans","EFL-1;20 degree celsius;Larvae L3 stage;ChIP-seq"
"ChIP-seq","TAG315","Histone Modification","Lieb, J.","3579","worm/LIEB_WIG_CHIPSEQ_TF/SDQ4470_TAG315_N2_MXEMB","Histone modification and replacement","data set","Mixed Embryos","C. elegans","TAG315;20 degree celsius;N2;Mixed Embryos;ChIP-seq"
"ChIP-seq","SFC-1","Histone Modification","Lieb, J.","3580","worm/LIEB_WIG_CHIPSEQ_TF/SDQ4526_TF3C_N2_MXEMB","Histone modification and replacement","data set","Mixed Embryos","C. elegans","SFC-1;20 degree celsius;N2;Mixed Embryos;ChIP-seq"
"ChIP-seq","RPC-1","Histone Modification","Lieb, J.","3581","worm/LIEB_WIG_CHIPSEQ_TF/SDQ4663_RPC1_N2_MXEMB","Histone modification and replacement","data set","Mixed Embryos","C. elegans","RPC-1;20 degree celsius;N2;Mixed Embryos;ChIP-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3608","fly_simul/Dsim_sub3608_merged.bam","RNA expression profiling","data set","Dsim Adult Male Whole Species","D. simulans","total-RNA;Dsim wildtype;Dsim Adult Male Whole Species;RNA-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3609","fly_simul/Dsim_sub3609_merged.bam","RNA expression profiling","data set","Dsim Adult Female Whole Species","D. simulans","total-RNA;Dsim wildtype;Dsim Adult Female Whole Species;RNA-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3610","fly_dmoj/Dmoj_sub3610.merged.bam","RNA expression profiling","data set","Dmoj Adult Male Whole Species","D. mojavensis","total-RNA;Dmojavensis;Dmoj Adult Male Whole Species;RNA-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3611","fly_dmoj/Dmoj_sub3611.merged.bam","RNA expression profiling","data set","Dmoj Adult Female Whole Species","D. mojavensis","total-RNA;Dmojavensis;Dmoj Adult Female Whole Species;RNA-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3613","fly_virilis/Dvir_sub3613_merged.bam","RNA expression profiling","data set","Dvir Adult Female Whole Species","D. virilis","total-RNA;Dvir wildtype;Dvir Adult Female Whole Species;RNA-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3615","fly_yakuba/Dyak_sub3615_merged.bam","RNA expression profiling","data set","Dyak Adult Female Whole Species","D. yakuba","total-RNA;Dyak wildtype;Dyak Adult Female Whole Species;RNA-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3617","fly_ananas/Dana_sub3617.merged.bam","RNA expression profiling","data set","Dana Adult Female Whole Species","D. ananassae","total-RNA;Dananassae;Dana Adult Female Whole Species;RNA-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3620","fly_dp/Dpse_sub3620.merged.bam","RNA expression profiling","data set","Dpse Adult Male Whole Species","D. pseudoobscura","total-RNA;D.pseudoobscura wild-type;Dpse Adult Male Whole Species;RNA-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3621","fly_dp/Dpse_sub3621.merged.bam","RNA expression profiling","data set","Dpse Adult Female Whole Species","D. pseudoobscura","total-RNA;D.pseudoobscura wild-type;Dpse Adult Female Whole Species;RNA-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3622","fly_simul/Dsim_sub3622.merged.bam","RNA expression profiling","data set","Dsim Adult Female Whole Species","D. simulans","total-RNA;D.sim w501;Dsim Adult Female Whole Species;RNA-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3623","fly_simul/Dsim_sub3623.merged.bam","RNA expression profiling","data set","Dsim Adult Male Whole Species","D. simulans","total-RNA;D.sim w501;Dsim Adult Male Whole Species;RNA-seq"
"ChIP-seq","pol2","DNA Replication","MacAlpine, D.","3625","fly/MacAlpine_CHIPSEQ_TISSUES/0-2HourRNAPolIIChIP-Seqexperiment","Replication","data set","Embryos 0-2 hr","D. melanogaster","pol2;Embryos 0-2 hr;ChIP-seq"
"ChIP-seq","ORC2","DNA Replication","MacAlpine, D.","3628","fly/MacAlpine_CHIPSEQ_TISSUES/0-2HourORCChIP-Seqexperiment","Replication","data set","Embryos 0-2 hr","D. melanogaster","ORC2;Embryos 0-2 hr;ChIP-seq"
"DNA-seq","Replication-Timing","DNA Replication","MacAlpine, D.","3630","fly/MacAlpine_REPLISEQ/Mid_Repli-Seq","Replication","data set","Late Embryonic stage","D. melanogaster","Replication-Timing;Late Embryonic stage;embryo-derived cell-line;DNA-seq"
"DNA-seq","Replication-Timing","DNA Replication","MacAlpine, D.","3630","fly/MacAlpine_REPLISEQ/Early_Repli-Seq","Replication","data set","Late Embryonic stage","D. melanogaster","Replication-Timing;Late Embryonic stage;embryo-derived cell-line;DNA-seq"
"DNA-seq","Replication-Timing","DNA Replication","MacAlpine, D.","3630","fly/MacAlpine_REPLISEQ/Late_Repli-Seq","Replication","data set","Late Embryonic stage","D. melanogaster","Replication-Timing;Late Embryonic stage;embryo-derived cell-line;DNA-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3631","fly/Dmel_sub3631.merged.bam","RNA expression profiling","data set","Adult Female","D. melanogaster","total-RNA;Dmel y1w67c23;Adult Female;RNA-seq"
"RNA-seq","total-RNA","mRNA","Oliver, B.","3632","fly/Dmel_sub3632.merged.bam","RNA expression profiling","data set","Adult Male","D. melanogaster","total-RNA;Dmel y1w67c23;Adult Male;RNA-seq"
"RNA-seq","total-RNA","mRNA","Celniker, S.","3633","fly/S2_DRSC_Untreated.SAM.bam.sorted","Gene Structure","data set","Late Embryonic stage","D. melanogaster","total-RNA;Untreated-(RNAi-control);S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3634","fly/AdVirginF_Ecl_1day_Heads.merged.bam","Gene Structure","data set","Adult Female, eclosion + 1 day","D. melanogaster","transfrag;Oregon R-modENCODE;Adult Female, eclosion + 1 day;Female virgin heads;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3635","fly/AdMatedF_Ecl_1day_Heads.merged.bam","Gene Structure","data set","Adult mated female eclosion + 20 days","D. melanogaster","transfrag;Oregon R-modENCODE;Adult mated female eclosion + 20 days;Mated Female heads;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3636","fly/AdMatedM_Ecl_1day_Heads.merged.bam","Gene Structure","data set","Adult Male, eclosion + 1 day","D. melanogaster","transfrag;Oregon R-modENCODE;Adult Male, eclosion + 1 day;Male heads;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3637","fly/AdMixedMF_Ecl_1day_DigestiveSystem.merged.bam","Gene Structure","data set","Adult, eclosion + 1 day","D. melanogaster","transfrag;Oregon R-modENCODE;Adult, eclosion + 1 day;digestive system;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3638","fly/AdMixedMF_Ecl_1day_Carcass.merged.bam","Gene Structure","data set","Adult, eclosion + 1 day","D. melanogaster","transfrag;Oregon R-modENCODE;Adult, eclosion + 1 day;carcass;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3639","fly/AdVirginF_Ecl_4days_Heads.merged.bam","Gene Structure","data set","Adult Female, eclosion + 1 day","D. melanogaster","transfrag;Oregon R-modENCODE;Adult Female, eclosion + 1 day;Female virgin heads;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3640","fly/AdMatedF_Ecl_4days_Heads.merged.bam","Gene Structure","data set","Adult mated female eclosion + 20 days","D. melanogaster","transfrag;Oregon R-modENCODE;Adult mated female eclosion + 20 days;Mated Female heads;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3641","fly/AdMatedM_Ecl_4days_Heads.merged.bam","Gene Structure","data set","Adult Male, eclosion + 1 day","D. melanogaster","transfrag;Oregon R-modENCODE;Adult Male, eclosion + 1 day;Male heads;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3642","fly/AdVirginF_Ecl_4days_Ovaries.merged.bam","Gene Structure","data set","Adult Female, eclosion + 4 days","D. melanogaster","transfrag;Oregon R-modENCODE;Adult Female, eclosion + 4 days;virgin adult ovaries;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3643","fly/AdMatedF_Ecl_4days_Ovaries.merged.bam","Gene Structure","data set","Adult mated female eclosion + 4 days","D. melanogaster","transfrag;Oregon R-modENCODE;Adult mated female eclosion + 4 days;mated adult ovaries;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3644","fly/AdMatedM_Ecl_4days_Testes.merged.bam","Gene Structure","data set","Adult Male, eclosion + 4 days","D. melanogaster","transfrag;Oregon R-modENCODE;Adult Male, eclosion + 4 days;testes;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3645","fly/AdMatedM_Ecl_4days_AccessoryGlands.merged.bam","Gene Structure","data set","Adult Male, eclosion + 4 days","D. melanogaster","transfrag;Oregon R-modENCODE;Adult Male, eclosion + 4 days;male accessory glands;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3646","fly/AdMixedMF_Ecl_4day_DigestiveSystem.merged.bam","Gene Structure","data set","Adult, eclosion + 1 day","D. melanogaster","transfrag;Oregon R-modENCODE;Adult, eclosion + 1 day;digestive system;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3647","fly/AdMixedMF_Ecl_4days_Carcass.merged.bam","Gene Structure","data set","Adult, eclosion + 1 day","D. melanogaster","transfrag;Oregon R-modENCODE;Adult, eclosion + 1 day;carcass;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3648","fly/AdVirginF_Ecl_20days_Heads.merged.bam","Gene Structure","data set","Adult Female, eclosion + 1 day","D. melanogaster","transfrag;Oregon R-modENCODE;Adult Female, eclosion + 1 day;Female virgin heads;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3649","fly/AdMatedF_Ecl_20days_Heads.merged.bam","Gene Structure","data set","Adult mated female eclosion + 20 days","D. melanogaster","transfrag;Oregon R-modENCODE;Adult mated female eclosion + 20 days;Mated Female heads;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3650","fly/AdMatedM_Ecl_20days_Heads.merged.bam","Gene Structure","data set","Adult Male, eclosion + 1 day","D. melanogaster","transfrag;Oregon R-modENCODE;Adult Male, eclosion + 1 day;Male heads;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3651","fly/AdMixedMF_Ecl_20days_DigestiveSystem.merged.bam","Gene Structure","data set","Adult, eclosion + 1 day","D. melanogaster","transfrag;Oregon R-modENCODE;Adult, eclosion + 1 day;digestive system;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3652","fly/AdMixedMF_Ecl_20days_Carcass.merged.bam","Gene Structure","data set","Adult, eclosion + 1 day","D. melanogaster","transfrag;Oregon R-modENCODE;Adult, eclosion + 1 day;carcass;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3653","fly/L3_FatBody.merged.bam","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","transfrag;Oregon R-modENCODE;L3 stage wandering stage larvae;fat body;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3654","fly/L3_ImaginalDiscs.merged.bam","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","transfrag;Oregon R-modENCODE;L3 stage wandering stage larvae;imaginal discs;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3655","fly/L3_SalivaryGlands.merged.bam","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","transfrag;Oregon R-modENCODE;L3 stage wandering stage larvae;salivary glands;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3656","fly/L3_DigestiveSystem.merged.bam","Gene Structure","data set","Adult, eclosion + 1 day","D. melanogaster","transfrag;Oregon R-modENCODE;Adult, eclosion + 1 day;digestive system;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3657","fly/L3_Carcass.merged.bam","Gene Structure","data set","Adult, eclosion + 1 day","D. melanogaster","transfrag;Oregon R-modENCODE;Adult, eclosion + 1 day;carcass;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3658","fly/L3_CNS.merged.bam","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","transfrag;Oregon R-modENCODE;L3 stage wandering stage larvae;central nervous system;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3659","fly/WPP_SalivaryGlands.merged.bam","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","transfrag;Oregon R-modENCODE;L3 stage wandering stage larvae;salivary glands;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3660","fly/WPP_FatBody.merged.bam","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","transfrag;Oregon R-modENCODE;L3 stage wandering stage larvae;fat body;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3661","fly/WPP_2days_CNS.merged.bam","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","transfrag;Oregon R-modENCODE;L3 stage wandering stage larvae;central nervous system;integrated-gene-model"
"integrated-gene-model","transfrag","mRNA","Celniker, S.","3662","fly/WPP_2days_Fat.589_BS326.sorted.bam","Gene Structure","data set","L3 stage wandering stage larvae","D. melanogaster","transfrag;Oregon R-modENCODE;L3 stage wandering stage larvae;fat body;integrated-gene-model"
"ChIP-chip","BEAF-32","Non TF Chromatin binding factor","Karpen, G.","3663","fly/KARPEN_CHIPCHIP_RNAi_BG3/BEAF-HB.BG3.BEAF_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","BEAF-32;CG10159-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","BEAF-32","Non TF Chromatin binding factor","Karpen, G.","3664","fly/KARPEN_CHIPCHIP_RNAi_BG3/BEAF-HB.BG3.CP190_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","BEAF-32;CG6384-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","BEAF-32","Non TF Chromatin binding factor","Karpen, G.","3665","fly/KARPEN_CHIPCHIP_RNAi_BG3/BEAF-HB.BG3.LacZ_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","BEAF-32;Fly-LacZ-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","CP190","Non TF Chromatin binding factor","Karpen, G.","3666","fly/KARPEN_CHIPCHIP_RNAi_BG3/CP190-HB.BG3.BEAF_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","CP190;CG10159-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","CP190","Non TF Chromatin binding factor","Karpen, G.","3667","fly/KARPEN_CHIPCHIP_RNAi_BG3/CP190-HB.BG3.CTCF_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","CP190;CG8591-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","CP190","Non TF Chromatin binding factor","Karpen, G.","3668","fly/KARPEN_CHIPCHIP_RNAi_BG3/CP190-HB.BG3.LacZ_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","CP190;Fly-LacZ-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","CP190","Non TF Chromatin binding factor","Karpen, G.","3669","fly/KARPEN_CHIPCHIP_RNAi_BG3/CP190-HB.BG3.mod_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","CP190;CG32491-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","CP190","Non TF Chromatin binding factor","Karpen, G.","3670","fly/KARPEN_CHIPCHIP_RNAi_BG3/CP190-HB.BG3.SU_HW_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","CP190;CG8573-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","CTCF","Non TF Chromatin binding factor","Karpen, G.","3671","fly/KARPEN_CHIPCHIP_RNAi_BG3/CTCF-VC.BG3.CP190_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","CTCF;CG6384-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","CTCF","Non TF Chromatin binding factor","Karpen, G.","3672","fly/KARPEN_CHIPCHIP_RNAi_BG3/CTCF-VC.BG3.CTCF_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","CTCF;CG8591-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","CTCF","Non TF Chromatin binding factor","Karpen, G.","3673","fly/KARPEN_CHIPCHIP_RNAi_BG3/CTCF-VC.BG3.LacZ_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","CTCF;Fly-LacZ-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","CTCF","Non TF Chromatin binding factor","Karpen, G.","3674","fly/KARPEN_CHIPCHIP_RNAi_BG3/CTCF-VC.BG3.SU_HW_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","CTCF;CG8573-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","dMi-2","Non TF Chromatin binding factor","Karpen, G.","3675","fly/KARPEN_CHIPCHIP_HISMODENZ_KC/dMi-2_Q4443.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","dMi-2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","dMi-2","Non TF Chromatin binding factor","Karpen, G.","3676","fly/KARPEN_CHIPCHIP_HISMODENZ_S2/dMi-2_Q4443.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","dMi-2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H2AV","Histone Modification","Karpen, G.","3678","fly/KARPEN_CHIPCHIP_HVARS_L3/H2AV_9751.D.mel3rdInstarLarvaeNuclei","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H2AV;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","H3K27me3","Non TF Chromatin binding factor","Karpen, G.","3679","fly/KARPEN_CHIPCHIP_RNAi_BG3/H3K27Me3_Abcam2.BG3.BEAF_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","H3K27me3;CG10159-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K27me3","Non TF Chromatin binding factor","Karpen, G.","3680","fly/KARPEN_CHIPCHIP_RNAi_BG3/H3K27Me3_Abcam2.BG3.CP190_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","H3K27me3;CG6384-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K27me3","Non TF Chromatin binding factor","Karpen, G.","3681","fly/KARPEN_CHIPCHIP_RNAi_BG3/H3K27Me3_Abcam2.BG3.CTCF_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","H3K27me3;CG8591-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K27me3","Non TF Chromatin binding factor","Karpen, G.","3682","fly/KARPEN_CHIPCHIP_RNAi_BG3/H3K27Me3_Abcam2.BG3.LacZ_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","H3K27me3;Fly-LacZ-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K27me3","Non TF Chromatin binding factor","Karpen, G.","3683","fly/KARPEN_CHIPCHIP_RNAi_BG3/H3K27Me3_Abcam2.BG3.SU_HW_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","H3K27me3;CG8573-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K36me3","Histone Modification","Karpen, G.","3687","fly/KARPEN_CHIPCHIP_HISMODS_H3_L3/H3K36me3abcam.D.mel3rdInstarLarvaeNuclei","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K36me3;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","H3K4me2","Histone Modification","Karpen, G.","3688","fly/KARPEN_CHIPCHIP_HISMODS_H3_L3/H3K4me2_JBC1360331.D.mel3rdInstarLarvaeNucleiSexedFemale","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K4me2;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","H3K4me2","Histone Modification","Karpen, G.","3689","fly/KARPEN_CHIPCHIP_HISMODS_H3_L3/H3K4me2_JBC1360331.D.mel3rdInstarLarvaeNucleiSexedMale","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K4me2;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","H3K4me3","Non TF Chromatin binding factor","Karpen, G.","3691","fly/KARPEN_CHIPCHIP_RNAi_BG3/H3K4me3_ab8580lot1.BG3.SU_HW_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","H3K4me3;CG8573-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9me2","Histone Modification","Karpen, G.","3694","fly/KARPEN_CHIPCHIP_HISMODS_H3_L3/H3K9me2-Ab2_newlot.D.mel3rdInstarLarvaeNucleiSexedFemale","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K9me2;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","HP1a","Non TF Chromatin binding factor","Karpen, G.","3700","fly/KARPEN_CHIPCHIP_CHRPROT_S2/HP1a_552.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","HP1a;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","HP1a","Non TF Chromatin binding factor","Karpen, G.","3704","fly/KARPEN_CHIPCHIP_CHROMPROTS_L3/HP1wa191.D.mel3rdInstarLarvaeNucleiSexedFemale","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","HP1a;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","HP1a","Non TF Chromatin binding factor","Karpen, G.","3705","fly/KARPEN_CHIPCHIP_CHROMPROTS_L3/HP1wa191.D.mel3rdInstarLarvaeNucleiSexedMale","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","HP1a;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","HP1a","Non TF Chromatin binding factor","Karpen, G.","3707","fly/KARPEN_CHIPCHIP_RNAi_S2/HP1wa191.S2.GFP_RNAi","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","HP1a;Fly-GFP-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","JHDM1","Non TF Chromatin binding factor","Karpen, G.","3708","fly/KARPEN_CHIPCHIP_HISMODENZ_KC/JHDM1_Q2634.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","JHDM1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","POF","Non TF Chromatin binding factor","Karpen, G.","3709","fly/KARPEN_CHIPCHIP_CHROMPROTS_L3/POF_MO459.D.mel3rdInstarLarvaeNucleiSexedMale","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","POF;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","POF","Non TF Chromatin binding factor","Karpen, G.","3710","fly/KARPEN_CHIPCHIP_CHRPROT_KC/POF_MO459.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","POF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","Karpen, G.","3712","fly/KARPEN_CHIPCHIP_RNAi_S2/RNAPolII_abcam.S2.Egg_RNAi","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","pol2;CG12196-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","Karpen, G.","3713","fly/KARPEN_CHIPCHIP_RNAi_S2/RNAPolII_abcam.S2.GFP_RNAi","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","pol2;Fly-GFP-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Su(Hw)","Non TF Chromatin binding factor","Karpen, G.","3714","fly/KARPEN_CHIPCHIP_RNAi_BG3/SU_HW-HB.BG3.CP190_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","Su(Hw);CG6384-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","Su(Hw)","Non TF Chromatin binding factor","Karpen, G.","3715","fly/KARPEN_CHIPCHIP_RNAi_BG3/SU_HW-HB.BG3.CTCF_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","Su(Hw);CG8591-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","Su(Hw)","Non TF Chromatin binding factor","Karpen, G.","3716","fly/KARPEN_CHIPCHIP_RNAi_BG3/SU_HW-HB.BG3.LacZ_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","Su(Hw);Fly-LacZ-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","Su(Hw)","Non TF Chromatin binding factor","Karpen, G.","3717","fly/KARPEN_CHIPCHIP_RNAi_BG3/SU_HW-HB.BG3.mod_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","Su(Hw);CG32491-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","Su(Hw)","Non TF Chromatin binding factor","Karpen, G.","3718","fly/KARPEN_CHIPCHIP_RNAi_BG3/SU_HW-HB.BG3.SU_HW_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","Su(Hw);CG8573-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","Su(Hw)","Non TF Chromatin binding factor","Karpen, G.","3719","fly/KARPEN_CHIPCHIP_RNAi_S2/SU_HW-HB.S2.LacZ_RNAi","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Su(Hw);Fly-LacZ-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"cDNA-sequencing","UTR","mRNA","Celniker, S.","3722","fly/Celniker_cDNA","Gene Structure","data set","","D. melanogaster","UTR;Y cn bw sp;cDNA-sequencing"
"RNA-seq","small-RNA","small RNA","Lai, E.","3741","fly/Lai_SAM_mbn2","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;Mbn2;Late Embryonic stage;embryonic/larval hemocyte;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3741","fly/Lai_RNASEQ_DUAL_CELLS/mbn2","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;Mbn2;Late Embryonic stage;embryonic/larval hemocyte;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3742","fly/Lai_SAM_1182_4H","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;1182-4H;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3742","fly/Lai_RNASEQ_DUAL_CELLS/1182-4H","RNA expression profiling","data set","Late Embryonic stage","D. melanogaster","small-RNA;1182-4H;Late Embryonic stage;embryo-derived cell-line;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3743","fly/Lai_SAM_CMEW2","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;CME W2;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"RNA-seq","small-RNA","small RNA","Lai, E.","3743","fly/Lai_RNASEQ_DUAL_CELLS/CMEW2","RNA expression profiling","data set","Larvae 3rd instar","D. melanogaster","small-RNA;CME W2;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq"
"ChIP-chip","ASH-1","Non TF Chromatin binding factor","Karpen, G.","3744","fly/KARPEN_CHIPCHIP_HISMODENZ_KC/ASH1Q4177.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","ASH-1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","BEAF-32","Non TF Chromatin binding factor","Karpen, G.","3745","fly/KARPEN_CHIPCHIP_INS_KC/BEAF-HB.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","BEAF-32;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","CP190","Non TF Chromatin binding factor","Karpen, G.","3747","fly/KARPEN_CHIPCHIP_RNAi_BG3/CP190-HB.BG3.CP190_RNAi","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","CP190;CG6384-RNAi;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip"
"ChIP-chip","CP190","Non TF Chromatin binding factor","Karpen, G.","3748","fly/KARPEN_CHIPCHIP_INS_KC/CP190-HB.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","CP190;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","CTCF","Non TF Chromatin binding factor","Karpen, G.","3749","fly/KARPEN_CHIPCHIP_INS_KC/CTCF.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","CTCF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","dRING","Non TF Chromatin binding factor","Karpen, G.","3750","fly/KARPEN_CHIPCHIP_HISMODENZ_KC/dRINGQ3200.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","dRING;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","dSFMBT","Non TF Chromatin binding factor","Karpen, G.","3751","fly/KARPEN_CHIPCHIP_POLYCOMB_S2/dSFMBTQ2642.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","dSFMBT;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","E(Z)","Non TF Chromatin binding factor","Karpen, G.","3752","fly/KARPEN_CHIPCHIP_HISMODENZ_KC/EZ-Q3419.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","E(Z);S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","GAF","Non TF Chromatin binding factor","Karpen, G.","3753","fly/KARPEN_CHIPCHIP_INS_KC/GAF.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","GAF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K23ac","Histone Modification","Karpen, G.","3755","fly/KARPEN_CHIPCHIP_HISMODS_H3_CL8/H3K23ac.Clone_8","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K23ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K27ac","Histone Modification","Karpen, G.","3757","fly/KARPEN_CHIPCHIP_HISMODS_H3_KC/H3K27Ac.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K27ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K27me2","Histone Modification","Karpen, G.","3758","fly/KARPEN_CHIPCHIP_HISMODS_H3_KC/H3K27me2.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K27me2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K4me1","Histone Modification","Karpen, G.","3760","fly/KARPEN_CHIPCHIP_HISMODS_H3_KC/H3K4me1.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K4me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K4me3","Histone Modification","Karpen, G.","3761","fly/KARPEN_CHIPCHIP_HISMODS_H3_KC/H3K4me3_ab8580lot1.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K4me3;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K79me1","Histone Modification","Karpen, G.","3762","fly/KARPEN_CHIPCHIP_HISMODS_H3_KC/H3K79Me1.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K79me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K79me2","Histone Modification","Karpen, G.","3763","fly/KARPEN_CHIPCHIP_HISMODS_H3_KC/H3K79Me2AbCam.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K79me2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9ac","Histone Modification","Karpen, G.","3765","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K9ac.BG3","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K9ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9me1","Histone Modification","Karpen, G.","3768","fly/KARPEN_CHIPCHIP_HISMODS_H3_BG3/H3K9me1_newlot.BG3","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K9me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9me1","Histone Modification","Karpen, G.","3769","fly/KARPEN_CHIPCHIP_HISMODS_H3_KC/H3K9me1_newlot.Kc","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K9me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9me1","Histone Modification","Karpen, G.","3770","fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K9me1.S2","Histone modification and replacement","data set","Late Embryonic stage","D. melanogaster","H3K9me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","H3K9me2","Histone Modification","Karpen, G.","3772","fly/KARPEN_CHIPCHIP_HISMODS_H3_L3/H3K9me2-Ab2_newlot.D.mel3rdInstarLarvaeNucleiSexedMale","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K9me2;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","HP1a","Non TF Chromatin binding factor","Karpen, G.","3777","fly/KARPEN_CHIPCHIP_CHRPROT_S2/HP1a_hinge.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","HP1a;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","HP4","Non TF Chromatin binding factor","Karpen, G.","3782","fly/KARPEN_CHIPCHIP_CHROMPROTS_L3/HP4Q4072.D.mel3rdInstarLarvaeNuclei","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","HP4;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","JMJD2A/KDM4A","Non TF Chromatin binding factor","Karpen, G.","3783","fly/KARPEN_CHIPCHIP_HISMODENZ_BG3/JMJD2A-KDM4A_Q2541.BG3","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","JMJD2A/KDM4A;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","JMJD2A/KDM4A","Non TF Chromatin binding factor","Karpen, G.","3784","fly/KARPEN_CHIPCHIP_HISMODENZ_S2/JMJD2A_Q2541.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","JMJD2A/KDM4A;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","LSD1","Non TF Chromatin binding factor","Karpen, G.","3785","fly/KARPEN_CHIPCHIP_HISMODENZ_BG3/LSD1_Q3430.BG3","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","LSD1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","LSD1","Non TF Chromatin binding factor","Karpen, G.","3786","fly/KARPEN_CHIPCHIP_HISMODENZ_KC/LSD1_Q3430.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","LSD1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","MBD-R2","Non TF Chromatin binding factor","Karpen, G.","3787","fly/KARPEN_CHIPCHIP_CHRPROT_KC/POF_MO459.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","MBD-R2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","MLE","Non TF Chromatin binding factor","Karpen, G.","3788","fly/KARPEN_CHIPCHIP_CHRPROT_S2/MLE_Q4143.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","MLE;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","mod(mdg4)","Non TF Chromatin binding factor","Karpen, G.","3789","fly/KARPEN_CHIPCHIP_INS_KC/mod2.2-VC.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","mod(mdg4);S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","NURF301","Non TF Chromatin binding factor","Karpen, G.","3790","fly/KARPEN_CHIPCHIP_REMODEL_KC/NURF301_Q2602.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","NURF301;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Pc","Non TF Chromatin binding factor","Karpen, G.","3791","fly/KARPEN_CHIPCHIP_POLYCOMB_KC/Pc.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Pc;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","PCL","Non TF Chromatin binding factor","Karpen, G.","3792","fly/KARPEN_CHIPCHIP_POLYCOMB_KC/PCLQ3412.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","PCL;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","POF","Non TF Chromatin binding factor","Karpen, G.","3795","fly/KARPEN_CHIPCHIP_CHROMPROTS_L3/POF_MO459.D.mel3rdInstarLarvaeNucleiSexedFemale","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","POF;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","Psc","Non TF Chromatin binding factor","Karpen, G.","3797","fly/KARPEN_CHIPCHIP_POLYCOMB_KC/Psc.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Psc;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","pol2","Non TF Chromatin binding factor","Karpen, G.","3799","fly/KARPEN_CHIPCHIP_CHROMPROTS_L3/RNAPolII_abcam.D.mel3rdInstarLarvaeNuclei","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","pol2;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","Smc3","Non TF Chromatin binding factor","Karpen, G.","3800","fly/KARPEN_CHIPCHIP_CHRPROT_KC/POF_MO459.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Smc3;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","ZW5","Non TF Chromatin binding factor","Karpen, G.","3803","fly/KARPEN_CHIPCHIP_INS_KC/ZW5.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","ZW5;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","ZW5","Non TF Chromatin binding factor","Karpen, G.","3804","fly/KARPEN_CHIPCHIP_INS_S2/ZW5.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","ZW5;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3873","worm/N2_EE_50-0.alignments.sam.gz.bam.sorted.bam","Gene Structure","data set","N2 EE 50-0","C. elegans","total-RNA;20 degree celsius;N2;N2 EE 50-0;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3874","worm/N2_EE_50-30.alignments.sam.gz.bam.sorted.bam","Gene Structure","data set","N2 EE 50-30","C. elegans","total-RNA;20 degree celsius;N2;N2 EE 50-30;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3875","worm/N2_EE_50-60.alignments.sam.gz.bam.sorted.bam","Gene Structure","data set","N2 EE 50-60","C. elegans","total-RNA;20 degree celsius;N2;N2 EE 50-60;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3876","worm/N2_EE_50-90.alignments.sam.gz.bam.sorted.bam","Gene Structure","data set","N2 EE 50-90","C. elegans","total-RNA;20 degree celsius;N2;N2 EE 50-90;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3877","worm/N2_EE_50-120.sam.gz.bam.sorted.bam","Gene Structure","data set","N2 EE 50-120","C. elegans","total-RNA;20 degree celsius;N2;N2 EE 50-120;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3879","worm/L4_25dC_36hrs_post-L1.alignments.ws220.bam.sorted","Gene Structure","data set","Mid-L4 34.25 hrs post-L1 stage larvae","C. elegans","total-RNA;20 degree celsius;N2;Mid-L4 34.25 hrs post-L1 stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3880","worm/L3_25dC_25hrs_post-L1.alignments.ws220.bam.sorted","Gene Structure","data set","L3-1 stage larvae","C. elegans","total-RNA;20 degree celsius;N2;L3-1 stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3881","worm/L2_25dC_14hrs_post-L1.all_alignments.ws220.bam.sorted","Gene Structure","data set","L2-4 stage larvae","C. elegans","total-RNA;20 degree celsius;N2;L2-4 stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3882","worm/L1_20dC_4hrs_post-L1.alignments.ws220.bam.sorted","Gene Structure","data set","Mid-L1 4.0 hrs post-L1 stage larvae","C. elegans","total-RNA;20 degree celsius;N2;Mid-L1 4.0 hrs post-L1 stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3883","worm/embryo_20dC_4.5hrs_post-early_embryo.alignments.ws220.bam.sorted","Gene Structure","data set","Early Embryos EE-2","C. elegans","total-RNA;20 degree celsius;N2;Early Embryos EE-2;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3884","worm/early_embryo.alignments.ws220.bam.sorted","Gene Structure","data set","Early Embryos EE-2","C. elegans","total-RNA;20 degree celsius;N2;Early Embryos EE-2;RNA-seq"
"ChIP-chip","H3K23ac","Histone Modification","Karpen, G.","3887","fly/KARPEN_CHIPCHIP_HISMODS_H3_L3/H3K23ac.D.mel3rdInstarLarvaeNuclei","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K23ac;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","H3K9me2","Histone Modification","Karpen, G.","3890","fly/KARPEN_CHIPCHIP_HISMODS_H3_L3/H3K9me2-Ab2_newlot.D.mel3rdInstarLarvaeNuclei","Histone modification and replacement","data set","Larvae 3rd instar","D. melanogaster","H3K9me2;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","HP1a","Non TF Chromatin binding factor","Karpen, G.","3893","fly/KARPEN_CHIPCHIP_RNAi_S2/HP1wa191.S2.HP1a_RNAi","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","HP1a;CG8409-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Pho","Non TF Chromatin binding factor","Karpen, G.","3894","fly/KARPEN_CHIPCHIP_POLYCOMB_S2/Pho.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Pho;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","POF","Non TF Chromatin binding factor","Karpen, G.","3897","fly/KARPEN_CHIPCHIP_CHRPROT_S2/POF_MO459.S2","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","POF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"ChIP-chip","Su(var)3-9","Non TF Chromatin binding factor","Karpen, G.","3898","fly/KARPEN_CHIPCHIP_HISMODENZ_L3","Other chromatin binding sites","data set","Larvae 3rd instar","D. melanogaster","Su(var)3-9;Oregon-R;Larvae 3rd instar;ChIP-chip"
"ChIP-chip","Su(var)3-9","Non TF Chromatin binding factor","Karpen, G.","3899","fly/KARPEN_CHIPCHIP_HISMODENZ_KC/Su_var_3-9-Q2598.Kc","Other chromatin binding sites","data set","Late Embryonic stage","D. melanogaster","Su(var)3-9;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3901","worm/YA_Adult_spe-9_23dC_8days_post-L4_molt.alignments.ws220.bam.sorted","Gene Structure","data set","Adult spe-9(hc88) 8 days post-L4 molt stage larvae","C. elegans","total-RNA;23 degree celsius;spe-9(hc88);Adult spe-9(hc88) 8 days post-L4 molt stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3902","worm/L33_dauer_daf-2_25dC_91hrs_post-L1.alignments.ws220.bam.sorted","Gene Structure","data set","Dauer daf-2(e1370) 91 hrs post-L1 stage larvae","C. elegans","total-RNA;20 degree celsius;daf-2(e1370);Dauer daf-2(e1370) 91 hrs post-L1 stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3903","worm/L33_dauer_entry_daf-2_25dC_48hrs_post-L1.alignments.ws220.bam.sorted","Gene Structure","data set","Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae","C. elegans","total-RNA;20 degree celsius;daf-2(e1370);Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3904","worm/L33_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1.alignments.ws220.bam.sorted","Gene Structure","data set","Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae","C. elegans","total-RNA;20 degree celsius;daf-2(e1370);Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3905","worm/embryo_him-8_20dC_post-L1.alignments.ws220.bam.sorted","Gene Structure","data set","Embryos him-8(e1480) EmMalesHIM8-2 hr","C. elegans","total-RNA;20 degree celsius;him-8(e1489);Embryos him-8(e1480) EmMalesHIM8-2 hr;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3906","worm/YA_Adult_Harposporium_exposed_2_24hrs.alignments.ws220.bam.sorted","Gene Structure","data set","Adult Harposporium exposed 2 24 hrs","C. elegans","total-RNA;25 degree celsius;N2;Adult Harposporium exposed 2 24 hrs;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3907","worm/YA_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs.alignments.ws220.bam.sorted","Gene Structure","data set","Adult Harposporium control EcoliOP50 exposed 2 24 hrs","C. elegans","total-RNA;20 degree celsius;N2;Adult Harposporium control EcoliOP50 exposed 2 24 hrs;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3908","worm/L4_soma_JK1107_no_DNaseI.alignments.ws220.bam.sorted","Gene Structure","data set","L4 soma JK1107 no DNaseI L4JK1107soma-2 stage larvae","C. elegans","total-RNA;20 degree celsius;JK1107;L4 soma JK1107 no DNaseI L4JK1107soma-2 stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3909","worm/yM_male_mid-L4_25dC_30hrs_post-L1.alignments.ws220.bam.sorted","Gene Structure","data set","Male  mid-L4 L4MALE5 stage larvae","C. elegans","total-RNA;20 degree celsius;N2;Male  mid-L4 L4MALE5 stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3910","worm/L1_lin35.alignments.ws220.bam.sorted","Gene Structure","data set","Lin-35(n745)  mid-L1 4.0 hrs post-L1 stage larvae","C. elegans","total-RNA;25 degree celsius;MT10430;Lin-35(n745)  mid-L1 4.0 hrs post-L1 stage larvae;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3911","worm/YA_Adult_S_macescens_Db10_exposed_1_24hrs.alignments.ws220.bam.sorted","Gene Structure","data set","Adult S macescens Db10 exposed 1 24 hrs","C. elegans","total-RNA;25 degree celsius;N2;Adult S macescens Db10 exposed 1 24 hrs;RNA-seq"
"RNA-seq","total-RNA","mRNA","Waterston, R.","3912","worm/YA_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs.alignments.ws220.bam.sorted","Gene Structure","data set","Adult S macescens Db10 control EcoliOP50 exposed 1 24 hrs","C. elegans","total-RNA;25 degree celsius;N2;Adult S macescens Db10 control EcoliOP50 exposed 1 24 hrs;RNA-seq"
