#NEXUS

BEGIN TAXA;
	DIMENSIONS NTAX = 11;
	TAXLABELS
		'D_UG_99_99UGB25647' 'D_UG_99_99UGB21875' 'D_UG_99_99UGA07412' 'B_AR_99_ARMA132' 'A1_KE_99_KSM4021' 'B_BO_99_BOL0122' 'A1_KE_99_KNH1135' 'A1_KE_99_KNH1088' 'D_UG_99_99UGD26830' 'D_UG_99_99UGD23550' 'D_UG_99_99UGB32394' ;
END;

BEGIN CHARACTERS;
	DIMENSIONS NCHAR = 864;
	FORMAT
		DATATYPE = DNA
		GAP=-
		MISSING=?
	;

MATRIX
	'D_UG_99_99UGB25647'  TTCTTGGATGGAATAGATAAGGCTCAAGAAGAACATGAGAAATACCACAGCAATTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCTGTGGTAGCAAAAGAAATAGTAGCTAGCTGTGATAAATGTCAGCTAAAAGGAGAAGCCTTGCATGGACAAGTAGACTGCAGTCCAGGAATATGGCAATTAGATTGTACACATTTAGAAGGAAAAGTTATCCTGGTCGCAGTCCATGTAGCCAGTGGCTATATAGAAGCAGAAGTTATTCCAGCAGAAACAGGGCAGGAAACAGCCTACTTTCTCTTGAAATTAGCAGGAAGATGGCCAGTAAAAGCAGTACATACAGACAATGGCAGCAATTTCACTAGCGCTGCAGTTAAGGCCGCCTGTTGGTGGGCAGGCATCAAGCAGGAATTTGGAATTCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAATAAAGAATTAAAGAAAATCATAGGACAGGTAAGAGATCAAGCTGAATATCTTAAGACAGCAGTACAAATGGCAGTATTCATCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGATACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACAAATCACAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCAATTTGGAAAGGACCAGCAAAACTTCTCTGGAAAGGTGAAGGGGCAGTAGTGATACAAGACAATAGTGAAATAAAGGTAGTACCAAGAAGAAAAGCAAAGATCATTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGAT
	'D_UG_99_99UGB21875'  TTCTTGGATGGAATAGATAAGGCTCAAGAAGAACATGAGAAATACCACAACAATTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCTGTGGTGGCAAAAGAAATAGTAGCTAGCTGTGATAAATGTCAGCTAAAAGGAGAAGCCTTGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAATTAGATTGTACACATTTAGAAGGAAAAGTTATCCTGGTAGCAGTCCATGTAGCCAGTGGCTATATAGAAGCAGAAGTTATCCCAGCAGAAACAGGGCAGGAAACAGCCTACTTTCTCTTGAAATTGGCAGGAAGATGGCCAGTAAAAACAGTACATACAGACAATGGCAGCAATTTCACCAGCGCTGCGGTTAAGGCCGCCTGTTGGTGGGCAGGCATCAAACAGGAATTTGGAATTCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAATAAAGAATTAAAGAAAATTATAGGACAAGTAAGAGATCAAGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATTCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAGTTACAAAAACAAATCATAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCAATTTGGAAAGGACCAGCAAAGCTTCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGACAATAGTGAAATAAAGGTAGTACCAAGAAGAAAAGTAAAGATCATTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGAT
	'D_UG_99_99UGA07412'  TTCTTGGATGGAATAGATAAGGCTCAAGAGGAACATGAAAAATACCACAACAATTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCGGTGGTAGCAAAAGAAATAGTAGCTAGCTGTGATAAATGCCAGCTAAAAGGAGAAGCCTTGCATGGACAAGTAGACTGTAGTCCAGGGATATGGCAATTAGATTGTACACATTTAGAAGGAAAAGTTATCCTGGTAGCAGTCCATGTAGCCAGTGGCTATATAGAAGCAGAGGTTATTCCAGCAGAAACAGGACAKGAAACAGCCTACTTTCTCTTGAAACTAGCAGGAAGGTGGCCGGTAAAAGTAGTACATACCGACAATGGCAGCAACTTCACCAGCGCTGCAGTTAAGGCCGCCTGCTGGTGGGCAGACATCAAGCAGGAATTTGGAATTCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAATAAAGAATTAAAGAAGATTATAGGACAGGTAAGAGATCAAGCTGAACATCTGAAGACAGCAGTACAAATGGCAGTATTCATTCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGATATACAAACTAAAGAATTACAAAAACAAATCACAAAAATTMRAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCAATTTGGAAAGGACCAGCAAAGCTTCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGACAATAGTGAAATAAAAGTAGTACCAAGAAGAAAAGCAAAGATCATTAGGGAYTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGAT
	'B_AR_99_ARMA132'     TTTTTAGATGGAATAGATAAGGCCCAAGAAGACCATGAGAAATATCACAGTAATTGGAGAGCAATGGCTGATGATTTTAACCTGCCACCTATAGTAGCAAAAGAGATAATAGCCTGCTGTGATAAATGTCAGCTAAAAGGAGAAGCCATACATGGGCAAGTAGACTGTAGTCCAGGAATATGGCAGCTAGATTGTACACACTTAGAAGGAAAAGTTATCCTGGTAGCAGTCCATGTAGCCAGTGGATATTTAGAAGCAGAAGTTATTCCAGCAGAAACAGGGCAAGAAACAGCATACTTTCTCTTAAAATTAGCAGGAAGATGGCCAGTAAAAACAATACATACAGACAATGGCCCCAATTTCGTCAGTACTGCGGTTAAAGCCGCCTGTTGGTGGGCGGGGATCAAGCAGGAATTTGGCATTCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAATAAAGAATTAAAGAAAATTATAGGACAGGTAAGAGATCAGGCTGAACATCTCAAGACAGCAGTACAAATGGCAGTATTCATCCACAATTTTAAGAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACAAATTACAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCAATTTGGAAAGGACCAGCAAAACTTCTCTGGAAAGGTGAAGGGGCAGTAGTGATACAAGAGAATAGTGACATAAAAGTAGTGCCAAGAAGAAAAGCAAAGATCATTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAGGTAGACAGGATGAGGAT
	'A1_KE_99_KSM4021'    TTTTTAGATGGGATAGATAAAGCTCAAGAAGAACATGAAAGATATCACAGCAATTGGAAAGCAATGGCTAGTGATTTTAACCTGCCACCTGTAGTAGCAAAGGAAATAGTAGCCAGCTGTGATAAATGTCAACTAAAAGGGGAAGCCATACATGGACAAGTAGACTGCAGTCCAGGGATATGGCAATTAGATTGCACACATCTAGAAGGAAAAGTAATTCTGGTAGCAGTTCATGTAGCCAGTGGTTATATAGAAGCAGAAGTTATCCCAGCAGAAACAGGACAGGAGACAGCATACTTTCTACTAAAATTAGCAGGAAGATGGCCAGTAAAAGTAGTACACACAGACAATGGCAGCAATTTCACCAGTGCTGCAGTTAAAGCAGCCTGTTGGTGGGCAGGTATCCAACAAGAATTTGGGATTCCCTACAATCCCCAAAGTCAAGGAGTAGTGGAATCTATGAATAAGGAATTAAAGAAAATCATAGGGCAGGTAAGAGAGCAAGCTGAACACCTTAGAACAGCAGTACAAATGGCAGTATTCATTCACAATTTTAAAAGAAAAGGGGGGATTGGAGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACAAATTACAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCAGTTTGGAAAGGACCAGCAAAACTACTCTGGAAAGGTGAAGGGGCAGTAGTAATACAGGATAATAGTGATATAAAGGTAGTACCAAGAAGGAAAGCAAAGATCATAAGGGACTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAGGTAGACAGGATGAGGAT
	'B_BO_99_BOL0122'     TTTCTGGATGGAATAGATAAGGCCCAAGATGAGCATGAGAAATATCACAGTAATTGGAGAGCAATTGCTAGTGATTTTAACCTGCCACCTGTAGTAGCAAAACAAATAGTAGCTAACTGTGATAAATGTCAGGTAAAGGGAGAAGCCATGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAACTAGATTGTACACATTTAGAAGGAAAAATTATCCTGGTAGCAGTTCATGTAGCCAGTGGATATATAGAAGCAGAAGTTATCCCAGCAGAAACAGGGCAGGAAACAGCATACTTTATCTTAAAATTAGCAGGAAGGTGGCCAGTAAAAACAATACATACAGACAATGGCAGCAATTTCACCAGTAATGCGGTCAAGGCCGCCTGCTGGTGGGCAGGGGTCAAGCAGGAATTTGGCATTCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAATAATGAATTAAAGAAAATTATAGGACAAGTAAGAGATCAGGCTGAACATCTTAAAACAGCAGTACAAATGGCAGTATTCATCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAGTAGACATAATAGCAACAGACATACAAACTAAAGAACTACAAAAACAAATTACAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAAGGACCAGCAAAGCTCCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGATAATAGTGACATAAAAGTAGTGCCAAGGAGAAAAGCAAAGATCATTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGAT
	'A1_KE_99_KNH1135'    TTTTTAGATGGGATAGATAAAGCTCAAGAAGAACATGAAAGATATCACAGCAATTGGAGAACAATGGCTAGTGACTTTAATCTGCCACCTATAGTAGCAAAGGAAATAGTTGCCAGCTGTGATAAATGTCAACTAAAAGGGGAAGCCATGCATGGACAAGTAGACTGTAGTCCAGGGATATGGCAGTTAGATTGCACACATCTGGAAGGAAAAGTAATTCTGGTAGCAGTCCATGTAGCCAGTGGCTACATAGAAGCAGAAGTTATCCCAGCAGAGACAGGACAGGAGACAGCATACTTTCTGCTAAAATTAGCAGGAAGGTGGCCAGTAAAAGTGGTACACACAGACAATGGCAGCAATTTCACCAGCGCTGCAGTTAAAGCAGCCTGTTGGTGGGCAGGTATCCAACAGGAATTTGGAATTCCCTACAATCCCCAGAGTCAAGGAGTAGTAGAATCTATGAATAAGGAATTAAAGAAAATCATAGGACAAGTAAGAGAGCAAGCTGAACACCTTAAAACAGCAGTACAAATGGCAGTATTCATTCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACAAATTACAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCAATTTGGAAAGGACCAGCAAAACTACTCTGGAAAGGTGAAGGGGCAGTAGTAATACAGGACAATAGTGATATAAAAGTAGTACCAAGAAGAAAAGCAAAAATCATTAGAGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAGGTAGACAGGATGAGGAT
	'A1_KE_99_KNH1088'    TTCTTAGATGGGATAGATAAAGCTCAAGAAGAACATGAAAGATATCACAGCAATTGGAAAGCAATGGCTAGTGATTTTAATTTGCCACCTATAGTAGCAAAGGAAATAGTAGCCAGCTGTGATAAATGCCAGCTAAAAGGGGAAGCCATACATGGACAGGTAGACTGCAGCCCAGGGATGTGGCAATTAGATTGCACACATCTAGAAGGAAAAGTAATTCTGGTAGCAGTCCATGTAGCCAGTGGCTATATAGAAGCAGAAGTTATCCCAGCAGAAACAGGACAGGAGACAGCATATTTTCTACTAAAATTAGCAGGAAGATGGCCAGTAAAAGTAGTACACACAGACAATGGCAGCAATTTCACCAGCACTGCATTTAAGGCAGCCTGTTGGTGGGCAGGTGTCCAACAGGAATTTGGGATCCCCTACAATCCCCAAAGTCAAGGAGTAGTGGAATCTATGAATAAAGAATTAAAGAAAATCATAGGACAAGTAAGAGAGCAAGCTGAACACCTTAAGACAGCAGTACAAATGGCAGTATTCATTCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACAAATTACAAAAATTCAAAAATTTCGGGTTTATTACAGGGACAGCAGAGATCCAATTTGGAAAGGACCAGCAAAACTACTCTGGAAAGGTGAAGGGGCAGTGGTAATACAGGACAATAGTGATATAAAGGTAGTACCAAGAAGAAAAGTAAAGATCATTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAGGTAGACAGGATGAGGAT
	'D_UG_99_99UGD26830'  TTTTTGGATGGAATAGATAAGGCGCAAGAAGAACATGAGAAATACCACAACAATTGGAGAGCAATGGCTAGTGATTTTAACCTACCACCTGTGGTAGCAAAAGAGATAGTAGCTAGCTGTGATAAATGTCAGCTAAAAGGAGAAGCCTTGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAGTTAGATTGTACACATTTAGAAGGAAAAGTTATCTTGGTAGCAGTCCATGTAGCCAGTGGCTATATAGAAGCAGAAGTTATTCCAGCAGAAACAGGGCAGGAAACAGCCTACTTTCTCTTAAAATTAGCAGGAAGATGGCCAGTAAAAGTAGTACATACAGACAATGGCAGCAATTTCACCAGCGCTGTAGTTAAGGCCGCCTGTTGGTGGGCAGGCATCAAACAGGAATTTGGAATTCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCAATGAATAAAGAATTGAAGAAAATTATCGGACAGGTAAGAGATCAAGCTGAACATCTTAAAACAGCAGTACAAATGGCAGTATTCATCCACAATTTTAAAAGAAAAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACAAATCATAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCAATTTGGAAAGGACCAGCAAAGCTTCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGACAATAGTGAAATAAAGGTAGTCCCAAGAAGAAAAGTAAAGATCATTAGGGATTATGGAAAACAAATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGAT
	'D_UG_99_99UGD23550'  TTTCTGGATGGAATAGATAAGGCTCAAGAAAAACATGAGAAATACCACAGCAACTGGAGAGCAATGGCTAGTGATTTCAACCTACCACCTGTGGTAGCAAAAGAAATAATAGCTAGCTGTGATAAATGTCAGCTAAAAGGAGAAGCCTTGCATGGACAAGTAGATTGTAGTCCAGGAATATGGCAATTAGACTGTACCCATTTAGAAGGAAAAGTTATCCTAGTAGCAGTCCATGTAGCCAGTGGCTACATAGAAGCAGAAGTTATTCCAGCAGAAACAGGGCAGGAAACAGCCTACTTCCTCTTAAAATTAGCAGGAAGATGGCCAGTAAAAGTAGTACATACAGACAATGGCAGCAACTTCACCAGCGCTGCAGTTAAGGCCGCCTGTTGGTGGGCAGGCATCAAGCAGGAATTTGGAATTCCCTATAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAATAAAGAATTAAAGAAAATTATAGGACAGGTAAGAGATCAAGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTATTCATCCACAATTTTAAAAGAAAAGGGGGGATTGGGAGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACAAATCACAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAGCAGAGATCCACTTTGGAAAGGACCAGCAAAGCTTCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGACAATAGTGAAATAAAAGTAGTACCAAGAAGAAAAGCAAAGATTATTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGAT
	'D_UG_99_99UGB32394'  TTCCTGGATGGAATAGATAAGGCTCAAGAAGAACATGAGAAATACCACAACAATTGGAGAGCAATGGCTAGTGATTTTAACCTGCCACCTGTGGTAGCAAAAGAAATAGTAGCTAGCTGTGATAAATGTCAGCTAAAAGGGGAAGCCTTGCATGGACAAGTAGACTGTAGTCCAGGAATATGGCAATTAGATTGTACACATTTAGAAGGAAAAGTTATCCTGGTAGCAGTCCATGTCGCCAGTGGCTACATAGAAGCAGAAGTTATTCCAGCGGAAACAGGACAGGAAACAGCCTACTTTCTTTTGAAACTGGCAGGAAGATGGCCAGTAAAAGTAGTACATACAGACAATGGCAGCAATTTCACTAGCGCTGCAGTTAAGGCTGCCTGTTGGTGGGCAGGCATCAAGCAGGAATTTGGAATTCCCTACAATCCCCAAAGTCAAGGAGTAGTAGAATCTATGAATAAAGAATTAAAAAAGATTATAGGACAGGTAAGAGATCAAGCTGAACATCTTAAGACAGCAGTACAAATGGCAGTCTTCATTCACAATTTTAAAAGAAGAGGGGGGATTGGGGGGTACAGTGCAGGGGAAAGAATAATAGACATAATAGCAACAGACATACAAACTAAAGAATTACAAAAACAAATCATAAAAATTCAAAATTTTCGGGTTTATTACAGGGACAACAGAGATCCAATTTGGAAAGGACCAGCAAAGCTTCTCTGGAAAGGTGAAGGGGCAGTAGTAATACAAGACAATAGTGACATAAAGGTAGTACCAAGAAGAAAAGTAAAAATTATTAGGGATTATGGAAAACAGATGGCAGGTGATGATTGTGTGGCAAGTAGACAGGATGAGGAT;
END;

BEGIN TREES;
	Tree Integrase_Tree = (((A1_KE_99_KNH1088:0.0248996,A1_KE_99_KSM4021:0.0205024):0.00322046,A1_KE_99_KNH1135:0.0236991):0.057531,(B_BO_99_BOL0122:0.039459,B_AR_99_ARMA132:0.0389111):0.0227006,((((D_UG_99_99UGD26830:0.0198025,(D_UG_99_99UGB21875:0.0100619,D_UG_99_99UGB32394:0.024448):0.00164981):0.00300225,D_UG_99_99UGA07412:0.024512):0.00150403,D_UG_99_99UGB25647:0.0113034):0.00145467,D_UG_99_99UGD23550:0.0247076):0.0111343);
END;
