# This file created by conda-build 3.19.2
# meta.yaml template originally from:
# /opt/recipe, last modified Fri Feb 26 18:06:04 2021
# ------------------------------------------------

package:
    name: hatchet
    version: 0.2.9
source:
    -   sha256: 67531ff13fb20d1ad63c621ff8f0632a050a3fdc592c5ec494aea1daf795b1aa
        url: https://github.com/raphael-group/hatchet/archive/v0.2.9.zip
    -   folder: gurobi902
        sha256: 6527581aef11c3e425c52993d108861ef53ec13971d9931861bf9c88d9d111f3
        url: https://packages.gurobi.com/9.0/gurobi9.0.2_linux64.tar.gz
build:
    number: '1'
    string: py37h9a982cc_1
requirements:
    build:
        - _libgcc_mutex 0.1 conda_forge
        - _openmp_mutex 4.5 1_gnu
        - binutils_impl_linux-64 2.35.1 h193b22a_2
        - binutils_linux-64 2.35 h67ddf6f_30
        - bzip2 1.0.8 h7f98852_4
        - c-ares 1.17.1 h36c2ea0_0
        - ca-certificates 2020.12.5 ha878542_0
        - cmake 3.19.6 h3020d66_0
        - expat 2.2.10 h9c3ff4c_0
        - gcc_impl_linux-64 7.5.0 hda68d29_13
        - gcc_linux-64 7.5.0 h47867f9_30
        - gxx_impl_linux-64 7.5.0 h64c220c_13
        - gxx_linux-64 7.5.0 h555fc39_30
        - kernel-headers_linux-64 2.6.32 h77966d4_13
        - krb5 1.17.2 h926e7f8_0
        - ld_impl_linux-64 2.35.1 hea4e1c9_2
        - libcurl 7.71.1 hcdd3856_8
        - libedit 3.1.20191231 he28a2e2_2
        - libev 4.33 h516909a_1
        - libgcc-ng 9.3.0 h2828fa1_18
        - libgomp 9.3.0 h2828fa1_18
        - libnghttp2 1.43.0 h812cca2_0
        - libssh2 1.9.0 hab1572f_5
        - libstdcxx-ng 9.3.0 h6de172a_18
        - libuv 1.41.0 h7f98852_0
        - lz4-c 1.9.3 h9c3ff4c_0
        - ncurses 6.2 h58526e2_4
        - openssl 1.1.1j h7f98852_0
        - rhash 1.4.1 h7f98852_0
        - sysroot_linux-64 2.12 h77966d4_13
        - tk 8.6.10 h21135ba_1
        - xz 5.2.5 h516909a_1
        - zlib 1.2.11 h516909a_1010
        - zstd 1.4.8 ha95c52a_1
    host:
        - _libgcc_mutex 0.1 conda_forge
        - _openmp_mutex 4.5 1_gnu
        - ca-certificates 2020.12.5 ha878542_0
        - certifi 2020.12.5 py37h89c1867_1
        - ld_impl_linux-64 2.35.1 hea4e1c9_2
        - libffi 3.3 h58526e2_2
        - libgcc-ng 9.3.0 h2828fa1_18
        - libgomp 9.3.0 h2828fa1_18
        - libstdcxx-ng 9.3.0 h6de172a_18
        - ncurses 6.2 h58526e2_4
        - openssl 1.1.1j h7f98852_0
        - pip 21.0.1 pyhd8ed1ab_0
        - python 3.7.10 hffdb5ce_100_cpython
        - python_abi 3.7 1_cp37m
        - readline 8.0 he28a2e2_2
        - setuptools 49.6.0 py37h89c1867_3
        - sqlite 3.34.0 h74cdb3f_0
        - tk 8.6.10 h21135ba_1
        - wheel 0.36.2 pyhd3deb0d_0
        - xz 5.2.5 h516909a_1
        - zlib 1.2.11 h516909a_1010
    run:
        - bcftools
        - biopython
        - libgcc-ng >=7.5.0
        - libstdcxx-ng >=7.5.0
        - matplotlib-base
        - pandas
        - psutil
        - pysam
        - python >=3.7,<3.8.0a0
        - python_abi 3.7.* *_cp37m
        - requests
        - samtools
        - scikit-learn
        - scipy
        - seaborn
test:
    imports:
        - hatchet
about:
    description: 'HATCHet is an algorithm to infer allele and clone-specific copy-number

        aberrations (CNAs), clone proportions, and whole-genome duplications

        (WGD) for several tumor clones jointly from multiple bulk-tumor samples

        of the same patient or from a single bulk-tumor sample.

        '
    home: https://github.com/raphael-group/hatchet
    license: BSD-3
    summary: Holistic Allele-specific Tumor Copy-number Heterogeneity
extra:
    copy_test_source_files: true
    final: true
