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master-test.sh
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gemini/GeminiQuery.py
gemini/__init__.py
gemini/anno_info.py
gemini/annotations.py
gemini/compression.py
gemini/config.py
gemini/database.py
gemini/dgidb.py
gemini/gemini_actionable_mutations.py
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gemini/mendelianerror.py
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gemini/popgen.py
gemini/sql.py
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gemini/stats.py
gemini/structural_variants.py
gemini/tool_burden_tests.py
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gemini/tool_homozygosity_runs.py
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gemini/tool_lof_sieve.py
gemini/tool_pathways.py
gemini/tool_qc.py
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gemini/annotation_provenance/clinvar.py
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gemini/annotation_provenance/make-cadd.sh
gemini/annotation_provenance/make-cancer-census.sh
gemini/annotation_provenance/make-clinvar.sh
gemini/annotation_provenance/make-cosmic.sh
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gemini/annotation_provenance/make-dbsnp.sh
gemini/annotation_provenance/make-encode-chrom-segs.sh
gemini/annotation_provenance/make-encode-tfbs-clustering.sh
gemini/annotation_provenance/make-esp-variants.sh
gemini/annotation_provenance/make-exac.sh
gemini/annotation_provenance/make-fitcons.sh
gemini/annotation_provenance/make-geno2mp.sh
gemini/annotation_provenance/make-gerp.sh
gemini/annotation_provenance/make-ncbi-grc-patches.py
gemini/annotation_provenance/make-pfam-ucsc.sh
gemini/annotation_provenance/make-polyphen2.sh
gemini/annotation_provenance/make-recombination.sh
gemini/annotation_provenance/make-rmsk-meta.sh
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