# This file created by conda-build 3.18.9
# meta.yaml template originally from:
# /opt/recipe, last modified Tue Jan 28 19:19:35 2020
# ------------------------------------------------

package:
    name: freebayes
    version: 1.3.2
source:
    git_rev: 54bf40915ae7e46798503471ac57f593efdb5493
    git_url: https://github.com/ekg/freebayes.git
    patches:
        - qcfail.diff
build:
    number: '0'
    string: py37hc088bd4_0
requirements:
    build:
        - _libgcc_mutex 0.1 conda_forge
        - _openmp_mutex 4.5 0_gnu
        - binutils_impl_linux-64 2.33.1 he1b5a44_7
        - binutils_linux-64 2.33.1 h9595d00_16
        - gcc_impl_linux-64 7.3.0 hd420e75_4
        - gcc_linux-64 7.3.0 h553295d_16
        - gxx_impl_linux-64 7.3.0 hdf63c60_4
        - gxx_linux-64 7.3.0 h553295d_16
        - ld_impl_linux-64 2.33.1 h53a641e_7
        - libgcc-ng 9.2.0 h24d8f2e_2
        - libgomp 9.2.0 h24d8f2e_2
        - libstdcxx-ng 9.2.0 hdf63c60_2
    host:
        - _libgcc_mutex 0.1 conda_forge
        - _openmp_mutex 4.5 0_gnu
        - bzip2 1.0.8 h516909a_2
        - ca-certificates 2019.11.28 hecc5488_0
        - certifi 2019.11.28 py37_0
        - ld_impl_linux-64 2.33.1 h53a641e_7
        - libffi 3.2.1 he1b5a44_1006
        - libgcc-ng 9.2.0 h24d8f2e_2
        - libgomp 9.2.0 h24d8f2e_2
        - libstdcxx-ng 9.2.0 hdf63c60_2
        - ncurses 6.1 hf484d3e_1002
        - openssl 1.1.1d h516909a_0
        - pip 20.0.2 py37_0
        - python 3.7.6 h357f687_2
        - readline 8.0 hf8c457e_0
        - setuptools 45.1.0 py37_0
        - sqlite 3.30.1 hcee41ef_0
        - tk 8.6.10 hed695b0_0
        - wheel 0.34.1 py37_0
        - xz 5.2.4 h14c3975_1001
        - zlib 1.2.11 h516909a_1006
    run:
        - bzip2 >=1.0.8,<2.0a0
        - bzip2 >=1.0.8,<2.0a0
        - htslib
        - libgcc-ng >=7.3.0
        - libstdcxx-ng >=7.3.0
        - parallel
        - python >=3.7,<3.8.0a0
        - xz >=5.2.4,<5.3.0a0
        - xz >=5.2.4,<5.3.0a0
        - zlib >=1.2.11,<1.3.0a0
        - zlib >=1.2.11,<1.3.0a0
test:
    commands:
        - freebayes --version
        - vcfstreamsort -h
        - bamleftalign -h
about:
    home: https://github.com/ekg/freebayes
    license: MIT
    license_family: MIT
    license_file: LICENSE
    maintainers: jpuritz
    summary: Bayesian haplotype-based polymorphism discovery and genotyping
extra:
    copy_test_source_files: true
    final: true
    identifiers:
        - biotools:freebayes
    skip-lints:
        - missing_hash
        - uses_vcs_url
