# This file created by conda-build 3.21.4
# meta.yaml template originally from:
# /opt/recipe, last modified Sat Mar 27 22:44:55 2021
# ------------------------------------------------

package:
  name: fargene
  version: '0.1'
source:
  - sha256: 047b27c41cf8a632a3c3da9a825492f2d77eb53a87ad195d71c7ace6493409fb
    url: https://github.com/thanhleviet/fargene/archive/v0.1.tar.gz
  - sha256: a5e05e6664ea4fb22b34ea4115ccd17efe396cfeb43b8fe2cb2a45e4c5652c27
    url: ftp://ftp.ncbi.nlm.nih.gov/genomes/TOOLS/ORFfinder/linux-i64/ORFfinder.gz
build:
  number: '4'
  string: py27h21c881e_4
requirements:
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 1_gnu
    - ca-certificates 2020.12.5 ha878542_0
    - certifi 2019.11.28 py27h8c360ce_1
    - ld_impl_linux-64 2.35.1 hea4e1c9_2
    - libffi 3.2.1 he1b5a44_1007
    - libgcc-ng 9.3.0 h2828fa1_18
    - libgomp 9.3.0 h2828fa1_18
    - libstdcxx-ng 9.3.0 h6de172a_18
    - ncurses 6.2 h58526e2_4
    - openssl 1.1.1k h7f98852_0
    - pip 20.1.1 pyh9f0ad1d_0
    - python 2.7.15 h5a48372_1011_cpython
    - python_abi 2.7 1_cp27mu
    - readline 8.0 he28a2e2_2
    - setuptools 44.0.0 py27_0
    - sqlite 3.35.3 h74cdb3f_0
    - tk 8.6.10 h21135ba_1
    - wheel 0.36.2 pyhd3deb0d_0
    - zlib 1.2.11 h516909a_1010
  run:
    - PyYAML
    - biopython >=1.68
    - clustalo
    - emboss
    - hmmer
    - matplotlib
    - numpy
    - pip
    - prodigal
    - python >=2.7,<2.8.0a0
    - python_abi 2.7.* *_cp27mu
    - seqtk
    - spades
    - trim-galore
test:
  commands:
    - fargene --help
    - command -v ORFfinder
about:
  home: https://github.com/fannyhb/fargene
  license: MIT
  license_file: LICENSE.md
  summary: Fragmented Antibiotic Resistance Gene iENntifiEr takes either fragmented
    metagenomic data or longer sequences as input and predicts and delivers full-length
    antiobiotic resistance genes as output
extra:
  copy_test_source_files: true
  final: true
  recipe-maintainers:
    - thanhleviet
