/* Generated by Cython 3.0.10 */

/* BEGIN: Cython Metadata
{
    "distutils": {
        "define_macros": [
            [
                "NPY_NO_DEPRECATED_API",
                "NPY_1_7_API_VERSION"
            ]
        ],
        "depends": [
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/_core/include/numpy/arrayobject.h",
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/_core/include/numpy/arrayscalars.h",
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/_core/include/numpy/ndarrayobject.h",
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/_core/include/numpy/ndarraytypes.h",
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/_core/include/numpy/ufuncobject.h",
            "/opt/conda/conda-bld/dysgu_1720171860637/work/dysgu/find_reads.hpp",
            "/opt/conda/conda-bld/dysgu_1720171860637/work/dysgu/graph_objects.hpp",
            "/opt/conda/conda-bld/dysgu_1720171860637/work/dysgu/robin_hood.h",
            "/opt/conda/conda-bld/dysgu_1720171860637/work/dysgu/xxhash64.h"
        ],
        "extra_compile_args": [
            "-std=c++11",
            "-Wno-sign-compare",
            "-Wno-unused-function",
            "-Wno-unused-result",
            "-Wno-ignored-qualifiers",
            "-Wno-deprecated-declarations",
            "-fpermissive",
            "-Wno-unreachable-code-fallthrough"
        ],
        "include_dirs": [
            "dysgu",
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/_core/include",
            "/opt/conda/conda-bld/dysgu_1720171860637/work",
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/include/htslib",
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/include",
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/pysam",
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/pysam/include/htslib",
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/pysam/include/samtools"
        ],
        "language": "c++",
        "libraries": [
            "hts"
        ],
        "library_dirs": [
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib",
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/_core/include",
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/pysam",
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/pysam/include/htslib",
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/pysam/include/samtools"
        ],
        "name": "dysgu.sv_category",
        "runtime_library_dirs": [
            "/opt/conda/conda-bld/dysgu_1720171860637/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib"
        ],
        "sources": [
            "dysgu/sv_category.pyx"
        ]
    },
    "module_name": "dysgu.sv_category"
}
END: Cython Metadata */

#ifndef PY_SSIZE_T_CLEAN
#define PY_SSIZE_T_CLEAN
#endif /* PY_SSIZE_T_CLEAN */
#if defined(CYTHON_LIMITED_API) && 0
  #ifndef Py_LIMITED_API
    #if CYTHON_LIMITED_API+0 > 0x03030000
      #define Py_LIMITED_API CYTHON_LIMITED_API
    #else
      #define Py_LIMITED_API 0x03030000
    #endif
  #endif
#endif

#include "Python.h"
#ifndef Py_PYTHON_H
    #error Python headers needed to compile C extensions, please install development version of Python.
#elif PY_VERSION_HEX < 0x02070000 || (0x03000000 <= PY_VERSION_HEX && PY_VERSION_HEX < 0x03030000)
    #error Cython requires Python 2.7+ or Python 3.3+.
#else
#if defined(CYTHON_LIMITED_API) && CYTHON_LIMITED_API
#define __PYX_EXTRA_ABI_MODULE_NAME "limited"
#else
#define __PYX_EXTRA_ABI_MODULE_NAME ""
#endif
#define CYTHON_ABI "3_0_10" __PYX_EXTRA_ABI_MODULE_NAME
#define __PYX_ABI_MODULE_NAME "_cython_" CYTHON_ABI
#define __PYX_TYPE_MODULE_PREFIX __PYX_ABI_MODULE_NAME "."
#define CYTHON_HEX_VERSION 0x03000AF0
#define CYTHON_FUTURE_DIVISION 1
#include <stddef.h>
#ifndef offsetof
  #define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
#endif
#if !defined(_WIN32) && !defined(WIN32) && !defined(MS_WINDOWS)
  #ifndef __stdcall
    #define __stdcall
  #endif
  #ifndef __cdecl
    #define __cdecl
  #endif
  #ifndef __fastcall
    #define __fastcall
  #endif
#endif
#ifndef DL_IMPORT
  #define DL_IMPORT(t) t
#endif
#ifndef DL_EXPORT
  #define DL_EXPORT(t) t
#endif
#define __PYX_COMMA ,
#ifndef HAVE_LONG_LONG
  #define HAVE_LONG_LONG
#endif
#ifndef PY_LONG_LONG
  #define PY_LONG_LONG LONG_LONG
#endif
#ifndef Py_HUGE_VAL
  #define Py_HUGE_VAL HUGE_VAL
#endif
#define __PYX_LIMITED_VERSION_HEX PY_VERSION_HEX
#if defined(GRAALVM_PYTHON)
  /* For very preliminary testing purposes. Most variables are set the same as PyPy.
     The existence of this section does not imply that anything works or is even tested */
  #define CYTHON_COMPILING_IN_PYPY 0
  #define CYTHON_COMPILING_IN_CPYTHON 0
  #define CYTHON_COMPILING_IN_LIMITED_API 0
  #define CYTHON_COMPILING_IN_GRAAL 1
  #define CYTHON_COMPILING_IN_NOGIL 0
  #undef CYTHON_USE_TYPE_SLOTS
  #define CYTHON_USE_TYPE_SLOTS 0
  #undef CYTHON_USE_TYPE_SPECS
  #define CYTHON_USE_TYPE_SPECS 0
  #undef CYTHON_USE_PYTYPE_LOOKUP
  #define CYTHON_USE_PYTYPE_LOOKUP 0
  #if PY_VERSION_HEX < 0x03050000
    #undef CYTHON_USE_ASYNC_SLOTS
    #define CYTHON_USE_ASYNC_SLOTS 0
  #elif !defined(CYTHON_USE_ASYNC_SLOTS)
    #define CYTHON_USE_ASYNC_SLOTS 1
  #endif
  #undef CYTHON_USE_PYLIST_INTERNALS
  #define CYTHON_USE_PYLIST_INTERNALS 0
  #undef CYTHON_USE_UNICODE_INTERNALS
  #define CYTHON_USE_UNICODE_INTERNALS 0
  #undef CYTHON_USE_UNICODE_WRITER
  #define CYTHON_USE_UNICODE_WRITER 0
  #undef CYTHON_USE_PYLONG_INTERNALS
  #define CYTHON_USE_PYLONG_INTERNALS 0
  #undef CYTHON_AVOID_BORROWED_REFS
  #define CYTHON_AVOID_BORROWED_REFS 1
  #undef CYTHON_ASSUME_SAFE_MACROS
  #define CYTHON_ASSUME_SAFE_MACROS 0
  #undef CYTHON_UNPACK_METHODS
  #define CYTHON_UNPACK_METHODS 0
  #undef CYTHON_FAST_THREAD_STATE
  #define CYTHON_FAST_THREAD_STATE 0
  #undef CYTHON_FAST_GIL
  #define CYTHON_FAST_GIL 0
  #undef CYTHON_METH_FASTCALL
  #define CYTHON_METH_FASTCALL 0
  #undef CYTHON_FAST_PYCALL
  #define CYTHON_FAST_PYCALL 0
  #ifndef CYTHON_PEP487_INIT_SUBCLASS
    #define CYTHON_PEP487_INIT_SUBCLASS (PY_MAJOR_VERSION >= 3)
  #endif
  #undef CYTHON_PEP489_MULTI_PHASE_INIT
  #define CYTHON_PEP489_MULTI_PHASE_INIT 1
  #undef CYTHON_USE_MODULE_STATE
  #define CYTHON_USE_MODULE_STATE 0
  #undef CYTHON_USE_TP_FINALIZE
  #define CYTHON_USE_TP_FINALIZE 0
  #undef CYTHON_USE_DICT_VERSIONS
  #define CYTHON_USE_DICT_VERSIONS 0
  #undef CYTHON_USE_EXC_INFO_STACK
  #define CYTHON_USE_EXC_INFO_STACK 0
  #ifndef CYTHON_UPDATE_DESCRIPTOR_DOC
    #define CYTHON_UPDATE_DESCRIPTOR_DOC 0
  #endif
  #undef CYTHON_USE_FREELISTS
  #define CYTHON_USE_FREELISTS 0
#elif defined(PYPY_VERSION)
  #define CYTHON_COMPILING_IN_PYPY 1
  #define CYTHON_COMPILING_IN_CPYTHON 0
  #define CYTHON_COMPILING_IN_LIMITED_API 0
  #define CYTHON_COMPILING_IN_GRAAL 0
  #define CYTHON_COMPILING_IN_NOGIL 0
  #undef CYTHON_USE_TYPE_SLOTS
  #define CYTHON_USE_TYPE_SLOTS 0
  #ifndef CYTHON_USE_TYPE_SPECS
    #define CYTHON_USE_TYPE_SPECS 0
  #endif
  #undef CYTHON_USE_PYTYPE_LOOKUP
  #define CYTHON_USE_PYTYPE_LOOKUP 0
  #if PY_VERSION_HEX < 0x03050000
    #undef CYTHON_USE_ASYNC_SLOTS
    #define CYTHON_USE_ASYNC_SLOTS 0
  #elif !defined(CYTHON_USE_ASYNC_SLOTS)
    #define CYTHON_USE_ASYNC_SLOTS 1
  #endif
  #undef CYTHON_USE_PYLIST_INTERNALS
  #define CYTHON_USE_PYLIST_INTERNALS 0
  #undef CYTHON_USE_UNICODE_INTERNALS
  #define CYTHON_USE_UNICODE_INTERNALS 0
  #undef CYTHON_USE_UNICODE_WRITER
  #define CYTHON_USE_UNICODE_WRITER 0
  #undef CYTHON_USE_PYLONG_INTERNALS
  #define CYTHON_USE_PYLONG_INTERNALS 0
  #undef CYTHON_AVOID_BORROWED_REFS
  #define CYTHON_AVOID_BORROWED_REFS 1
  #undef CYTHON_ASSUME_SAFE_MACROS
  #define CYTHON_ASSUME_SAFE_MACROS 0
  #undef CYTHON_UNPACK_METHODS
  #define CYTHON_UNPACK_METHODS 0
  #undef CYTHON_FAST_THREAD_STATE
  #define CYTHON_FAST_THREAD_STATE 0
  #undef CYTHON_FAST_GIL
  #define CYTHON_FAST_GIL 0
  #undef CYTHON_METH_FASTCALL
  #define CYTHON_METH_FASTCALL 0
  #undef CYTHON_FAST_PYCALL
  #define CYTHON_FAST_PYCALL 0
  #ifndef CYTHON_PEP487_INIT_SUBCLASS
    #define CYTHON_PEP487_INIT_SUBCLASS (PY_MAJOR_VERSION >= 3)
  #endif
  #if PY_VERSION_HEX < 0x03090000
    #undef CYTHON_PEP489_MULTI_PHASE_INIT
    #define CYTHON_PEP489_MULTI_PHASE_INIT 0
  #elif !defined(CYTHON_PEP489_MULTI_PHASE_INIT)
    #define CYTHON_PEP489_MULTI_PHASE_INIT 1
  #endif
  #undef CYTHON_USE_MODULE_STATE
  #define CYTHON_USE_MODULE_STATE 0
  #undef CYTHON_USE_TP_FINALIZE
  #define CYTHON_USE_TP_FINALIZE (PY_VERSION_HEX >= 0x030400a1 && PYPY_VERSION_NUM >= 0x07030C00)
  #undef CYTHON_USE_DICT_VERSIONS
  #define CYTHON_USE_DICT_VERSIONS 0
  #undef CYTHON_USE_EXC_INFO_STACK
  #define CYTHON_USE_EXC_INFO_STACK 0
  #ifndef CYTHON_UPDATE_DESCRIPTOR_DOC
    #define CYTHON_UPDATE_DESCRIPTOR_DOC 0
  #endif
  #undef CYTHON_USE_FREELISTS
  #define CYTHON_USE_FREELISTS 0
#elif defined(CYTHON_LIMITED_API)
  #ifdef Py_LIMITED_API
    #undef __PYX_LIMITED_VERSION_HEX
    #define __PYX_LIMITED_VERSION_HEX Py_LIMITED_API
  #endif
  #define CYTHON_COMPILING_IN_PYPY 0
  #define CYTHON_COMPILING_IN_CPYTHON 0
  #define CYTHON_COMPILING_IN_LIMITED_API 1
  #define CYTHON_COMPILING_IN_GRAAL 0
  #define CYTHON_COMPILING_IN_NOGIL 0
  #undef CYTHON_CLINE_IN_TRACEBACK
  #define CYTHON_CLINE_IN_TRACEBACK 0
  #undef CYTHON_USE_TYPE_SLOTS
  #define CYTHON_USE_TYPE_SLOTS 0
  #undef CYTHON_USE_TYPE_SPECS
  #define CYTHON_USE_TYPE_SPECS 1
  #undef CYTHON_USE_PYTYPE_LOOKUP
  #define CYTHON_USE_PYTYPE_LOOKUP 0
  #undef CYTHON_USE_ASYNC_SLOTS
  #define CYTHON_USE_ASYNC_SLOTS 0
  #undef CYTHON_USE_PYLIST_INTERNALS
  #define CYTHON_USE_PYLIST_INTERNALS 0
  #undef CYTHON_USE_UNICODE_INTERNALS
  #define CYTHON_USE_UNICODE_INTERNALS 0
  #ifndef CYTHON_USE_UNICODE_WRITER
    #define CYTHON_USE_UNICODE_WRITER 0
  #endif
  #undef CYTHON_USE_PYLONG_INTERNALS
  #define CYTHON_USE_PYLONG_INTERNALS 0
  #ifndef CYTHON_AVOID_BORROWED_REFS
    #define CYTHON_AVOID_BORROWED_REFS 0
  #endif
  #undef CYTHON_ASSUME_SAFE_MACROS
  #define CYTHON_ASSUME_SAFE_MACROS 0
  #undef CYTHON_UNPACK_METHODS
  #define CYTHON_UNPACK_METHODS 0
  #undef CYTHON_FAST_THREAD_STATE
  #define CYTHON_FAST_THREAD_STATE 0
  #undef CYTHON_FAST_GIL
  #define CYTHON_FAST_GIL 0
  #undef CYTHON_METH_FASTCALL
  #define CYTHON_METH_FASTCALL 0
  #undef CYTHON_FAST_PYCALL
  #define CYTHON_FAST_PYCALL 0
  #ifndef CYTHON_PEP487_INIT_SUBCLASS
    #define CYTHON_PEP487_INIT_SUBCLASS 1
  #endif
  #undef CYTHON_PEP489_MULTI_PHASE_INIT
  #define CYTHON_PEP489_MULTI_PHASE_INIT 0
  #undef CYTHON_USE_MODULE_STATE
  #define CYTHON_USE_MODULE_STATE 1
  #ifndef CYTHON_USE_TP_FINALIZE
    #define CYTHON_USE_TP_FINALIZE 0
  #endif
  #undef CYTHON_USE_DICT_VERSIONS
  #define CYTHON_USE_DICT_VERSIONS 0
  #undef CYTHON_USE_EXC_INFO_STACK
  #define CYTHON_USE_EXC_INFO_STACK 0
  #ifndef CYTHON_UPDATE_DESCRIPTOR_DOC
    #define CYTHON_UPDATE_DESCRIPTOR_DOC 0
  #endif
  #undef CYTHON_USE_FREELISTS
  #define CYTHON_USE_FREELISTS 0
#elif defined(Py_GIL_DISABLED) || defined(Py_NOGIL)
  #define CYTHON_COMPILING_IN_PYPY 0
  #define CYTHON_COMPILING_IN_CPYTHON 0
  #define CYTHON_COMPILING_IN_LIMITED_API 0
  #define CYTHON_COMPILING_IN_GRAAL 0
  #define CYTHON_COMPILING_IN_NOGIL 1
  #ifndef CYTHON_USE_TYPE_SLOTS
    #define CYTHON_USE_TYPE_SLOTS 1
  #endif
  #ifndef CYTHON_USE_TYPE_SPECS
    #define CYTHON_USE_TYPE_SPECS 0
  #endif
  #undef CYTHON_USE_PYTYPE_LOOKUP
  #define CYTHON_USE_PYTYPE_LOOKUP 0
  #ifndef CYTHON_USE_ASYNC_SLOTS
    #define CYTHON_USE_ASYNC_SLOTS 1
  #endif
  #ifndef CYTHON_USE_PYLONG_INTERNALS
    #define CYTHON_USE_PYLONG_INTERNALS 0
  #endif
  #undef CYTHON_USE_PYLIST_INTERNALS
  #define CYTHON_USE_PYLIST_INTERNALS 0
  #ifndef CYTHON_USE_UNICODE_INTERNALS
    #define CYTHON_USE_UNICODE_INTERNALS 1
  #endif
  #undef CYTHON_USE_UNICODE_WRITER
  #define CYTHON_USE_UNICODE_WRITER 0
  #ifndef CYTHON_AVOID_BORROWED_REFS
    #define CYTHON_AVOID_BORROWED_REFS 0
  #endif
  #ifndef CYTHON_ASSUME_SAFE_MACROS
    #define CYTHON_ASSUME_SAFE_MACROS 1
  #endif
  #ifndef CYTHON_UNPACK_METHODS
    #define CYTHON_UNPACK_METHODS 1
  #endif
  #undef CYTHON_FAST_THREAD_STATE
  #define CYTHON_FAST_THREAD_STATE 0
  #undef CYTHON_FAST_GIL
  #define CYTHON_FAST_GIL 0
  #ifndef CYTHON_METH_FASTCALL
    #define CYTHON_METH_FASTCALL 1
  #endif
  #undef CYTHON_FAST_PYCALL
  #define CYTHON_FAST_PYCALL 0
  #ifndef CYTHON_PEP487_INIT_SUBCLASS
    #define CYTHON_PEP487_INIT_SUBCLASS 1
  #endif
  #ifndef CYTHON_PEP489_MULTI_PHASE_INIT
    #define CYTHON_PEP489_MULTI_PHASE_INIT 1
  #endif
  #ifndef CYTHON_USE_MODULE_STATE
    #define CYTHON_USE_MODULE_STATE 0
  #endif
  #ifndef CYTHON_USE_TP_FINALIZE
    #define CYTHON_USE_TP_FINALIZE 1
  #endif
  #undef CYTHON_USE_DICT_VERSIONS
  #define CYTHON_USE_DICT_VERSIONS 0
  #undef CYTHON_USE_EXC_INFO_STACK
  #define CYTHON_USE_EXC_INFO_STACK 0
  #ifndef CYTHON_UPDATE_DESCRIPTOR_DOC
    #define CYTHON_UPDATE_DESCRIPTOR_DOC 1
  #endif
  #ifndef CYTHON_USE_FREELISTS
    #define CYTHON_USE_FREELISTS 0
  #endif
#else
  #define CYTHON_COMPILING_IN_PYPY 0
  #define CYTHON_COMPILING_IN_CPYTHON 1
  #define CYTHON_COMPILING_IN_LIMITED_API 0
  #define CYTHON_COMPILING_IN_GRAAL 0
  #define CYTHON_COMPILING_IN_NOGIL 0
  #ifndef CYTHON_USE_TYPE_SLOTS
    #define CYTHON_USE_TYPE_SLOTS 1
  #endif
  #ifndef CYTHON_USE_TYPE_SPECS
    #define CYTHON_USE_TYPE_SPECS 0
  #endif
  #ifndef CYTHON_USE_PYTYPE_LOOKUP
    #define CYTHON_USE_PYTYPE_LOOKUP 1
  #endif
  #if PY_MAJOR_VERSION < 3
    #undef CYTHON_USE_ASYNC_SLOTS
    #define CYTHON_USE_ASYNC_SLOTS 0
  #elif !defined(CYTHON_USE_ASYNC_SLOTS)
    #define CYTHON_USE_ASYNC_SLOTS 1
  #endif
  #ifndef CYTHON_USE_PYLONG_INTERNALS
    #define CYTHON_USE_PYLONG_INTERNALS 1
  #endif
  #ifndef CYTHON_USE_PYLIST_INTERNALS
    #define CYTHON_USE_PYLIST_INTERNALS 1
  #endif
  #ifndef CYTHON_USE_UNICODE_INTERNALS
    #define CYTHON_USE_UNICODE_INTERNALS 1
  #endif
  #if PY_VERSION_HEX < 0x030300F0 || PY_VERSION_HEX >= 0x030B00A2
    #undef CYTHON_USE_UNICODE_WRITER
    #define CYTHON_USE_UNICODE_WRITER 0
  #elif !defined(CYTHON_USE_UNICODE_WRITER)
    #define CYTHON_USE_UNICODE_WRITER 1
  #endif
  #ifndef CYTHON_AVOID_BORROWED_REFS
    #define CYTHON_AVOID_BORROWED_REFS 0
  #endif
  #ifndef CYTHON_ASSUME_SAFE_MACROS
    #define CYTHON_ASSUME_SAFE_MACROS 1
  #endif
  #ifndef CYTHON_UNPACK_METHODS
    #define CYTHON_UNPACK_METHODS 1
  #endif
  #ifndef CYTHON_FAST_THREAD_STATE
    #define CYTHON_FAST_THREAD_STATE 1
  #endif
  #ifndef CYTHON_FAST_GIL
    #define CYTHON_FAST_GIL (PY_MAJOR_VERSION < 3 || PY_VERSION_HEX >= 0x03060000 && PY_VERSION_HEX < 0x030C00A6)
  #endif
  #ifndef CYTHON_METH_FASTCALL
    #define CYTHON_METH_FASTCALL (PY_VERSION_HEX >= 0x030700A1)
  #endif
  #ifndef CYTHON_FAST_PYCALL
    #define CYTHON_FAST_PYCALL 1
  #endif
  #ifndef CYTHON_PEP487_INIT_SUBCLASS
    #define CYTHON_PEP487_INIT_SUBCLASS 1
  #endif
  #if PY_VERSION_HEX < 0x03050000
    #undef CYTHON_PEP489_MULTI_PHASE_INIT
    #define CYTHON_PEP489_MULTI_PHASE_INIT 0
  #elif !defined(CYTHON_PEP489_MULTI_PHASE_INIT)
    #define CYTHON_PEP489_MULTI_PHASE_INIT 1
  #endif
  #ifndef CYTHON_USE_MODULE_STATE
    #define CYTHON_USE_MODULE_STATE 0
  #endif
  #if PY_VERSION_HEX < 0x030400a1
    #undef CYTHON_USE_TP_FINALIZE
    #define CYTHON_USE_TP_FINALIZE 0
  #elif !defined(CYTHON_USE_TP_FINALIZE)
    #define CYTHON_USE_TP_FINALIZE 1
  #endif
  #if PY_VERSION_HEX < 0x030600B1
    #undef CYTHON_USE_DICT_VERSIONS
    #define CYTHON_USE_DICT_VERSIONS 0
  #elif !defined(CYTHON_USE_DICT_VERSIONS)
    #define CYTHON_USE_DICT_VERSIONS  (PY_VERSION_HEX < 0x030C00A5)
  #endif
  #if PY_VERSION_HEX < 0x030700A3
    #undef CYTHON_USE_EXC_INFO_STACK
    #define CYTHON_USE_EXC_INFO_STACK 0
  #elif !defined(CYTHON_USE_EXC_INFO_STACK)
    #define CYTHON_USE_EXC_INFO_STACK 1
  #endif
  #ifndef CYTHON_UPDATE_DESCRIPTOR_DOC
    #define CYTHON_UPDATE_DESCRIPTOR_DOC 1
  #endif
  #ifndef CYTHON_USE_FREELISTS
    #define CYTHON_USE_FREELISTS 1
  #endif
#endif
#if !defined(CYTHON_FAST_PYCCALL)
#define CYTHON_FAST_PYCCALL  (CYTHON_FAST_PYCALL && PY_VERSION_HEX >= 0x030600B1)
#endif
#if !defined(CYTHON_VECTORCALL)
#define CYTHON_VECTORCALL  (CYTHON_FAST_PYCCALL && PY_VERSION_HEX >= 0x030800B1)
#endif
#define CYTHON_BACKPORT_VECTORCALL (CYTHON_METH_FASTCALL && PY_VERSION_HEX < 0x030800B1)
#if CYTHON_USE_PYLONG_INTERNALS
  #if PY_MAJOR_VERSION < 3
    #include "longintrepr.h"
  #endif
  #undef SHIFT
  #undef BASE
  #undef MASK
  #ifdef SIZEOF_VOID_P
    enum { __pyx_check_sizeof_voidp = 1 / (int)(SIZEOF_VOID_P == sizeof(void*)) };
  #endif
#endif
#ifndef __has_attribute
  #define __has_attribute(x) 0
#endif
#ifndef __has_cpp_attribute
  #define __has_cpp_attribute(x) 0
#endif
#ifndef CYTHON_RESTRICT
  #if defined(__GNUC__)
    #define CYTHON_RESTRICT __restrict__
  #elif defined(_MSC_VER) && _MSC_VER >= 1400
    #define CYTHON_RESTRICT __restrict
  #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L
    #define CYTHON_RESTRICT restrict
  #else
    #define CYTHON_RESTRICT
  #endif
#endif
#ifndef CYTHON_UNUSED
  #if defined(__cplusplus)
    /* for clang __has_cpp_attribute(maybe_unused) is true even before C++17
     * but leads to warnings with -pedantic, since it is a C++17 feature */
    #if ((defined(_MSVC_LANG) && _MSVC_LANG >= 201703L) || __cplusplus >= 201703L)
      #if __has_cpp_attribute(maybe_unused)
        #define CYTHON_UNUSED [[maybe_unused]]
      #endif
    #endif
  #endif
#endif
#ifndef CYTHON_UNUSED
# if defined(__GNUC__)
#   if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4))
#     define CYTHON_UNUSED __attribute__ ((__unused__))
#   else
#     define CYTHON_UNUSED
#   endif
# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER))
#   define CYTHON_UNUSED __attribute__ ((__unused__))
# else
#   define CYTHON_UNUSED
# endif
#endif
#ifndef CYTHON_UNUSED_VAR
#  if defined(__cplusplus)
     template<class T> void CYTHON_UNUSED_VAR( const T& ) { }
#  else
#    define CYTHON_UNUSED_VAR(x) (void)(x)
#  endif
#endif
#ifndef CYTHON_MAYBE_UNUSED_VAR
  #define CYTHON_MAYBE_UNUSED_VAR(x) CYTHON_UNUSED_VAR(x)
#endif
#ifndef CYTHON_NCP_UNUSED
# if CYTHON_COMPILING_IN_CPYTHON
#  define CYTHON_NCP_UNUSED
# else
#  define CYTHON_NCP_UNUSED CYTHON_UNUSED
# endif
#endif
#ifndef CYTHON_USE_CPP_STD_MOVE
  #if defined(__cplusplus) && (\
    __cplusplus >= 201103L || (defined(_MSC_VER) && _MSC_VER >= 1600))
    #define CYTHON_USE_CPP_STD_MOVE 1
  #else
    #define CYTHON_USE_CPP_STD_MOVE 0
  #endif
#endif
#define __Pyx_void_to_None(void_result) ((void)(void_result), Py_INCREF(Py_None), Py_None)
#ifdef _MSC_VER
    #ifndef _MSC_STDINT_H_
        #if _MSC_VER < 1300
            typedef unsigned char     uint8_t;
            typedef unsigned short    uint16_t;
            typedef unsigned int      uint32_t;
        #else
            typedef unsigned __int8   uint8_t;
            typedef unsigned __int16  uint16_t;
            typedef unsigned __int32  uint32_t;
        #endif
    #endif
    #if _MSC_VER < 1300
        #ifdef _WIN64
            typedef unsigned long long  __pyx_uintptr_t;
        #else
            typedef unsigned int        __pyx_uintptr_t;
        #endif
    #else
        #ifdef _WIN64
            typedef unsigned __int64    __pyx_uintptr_t;
        #else
            typedef unsigned __int32    __pyx_uintptr_t;
        #endif
    #endif
#else
    #include <stdint.h>
    typedef uintptr_t  __pyx_uintptr_t;
#endif
#ifndef CYTHON_FALLTHROUGH
  #if defined(__cplusplus)
    /* for clang __has_cpp_attribute(fallthrough) is true even before C++17
     * but leads to warnings with -pedantic, since it is a C++17 feature */
    #if ((defined(_MSVC_LANG) && _MSVC_LANG >= 201703L) || __cplusplus >= 201703L)
      #if __has_cpp_attribute(fallthrough)
        #define CYTHON_FALLTHROUGH [[fallthrough]]
      #endif
    #endif
    #ifndef CYTHON_FALLTHROUGH
      #if __has_cpp_attribute(clang::fallthrough)
        #define CYTHON_FALLTHROUGH [[clang::fallthrough]]
      #elif __has_cpp_attribute(gnu::fallthrough)
        #define CYTHON_FALLTHROUGH [[gnu::fallthrough]]
      #endif
    #endif
  #endif
  #ifndef CYTHON_FALLTHROUGH
    #if __has_attribute(fallthrough)
      #define CYTHON_FALLTHROUGH __attribute__((fallthrough))
    #else
      #define CYTHON_FALLTHROUGH
    #endif
  #endif
  #if defined(__clang__) && defined(__apple_build_version__)
    #if __apple_build_version__ < 7000000
      #undef  CYTHON_FALLTHROUGH
      #define CYTHON_FALLTHROUGH
    #endif
  #endif
#endif
#ifdef __cplusplus
  template <typename T>
  struct __PYX_IS_UNSIGNED_IMPL {static const bool value = T(0) < T(-1);};
  #define __PYX_IS_UNSIGNED(type) (__PYX_IS_UNSIGNED_IMPL<type>::value)
#else
  #define __PYX_IS_UNSIGNED(type) (((type)-1) > 0)
#endif
#if CYTHON_COMPILING_IN_PYPY == 1
  #define __PYX_NEED_TP_PRINT_SLOT  (PY_VERSION_HEX >= 0x030800b4 && PY_VERSION_HEX < 0x030A0000)
#else
  #define __PYX_NEED_TP_PRINT_SLOT  (PY_VERSION_HEX >= 0x030800b4 && PY_VERSION_HEX < 0x03090000)
#endif
#define __PYX_REINTERPRET_FUNCION(func_pointer, other_pointer) ((func_pointer)(void(*)(void))(other_pointer))

#ifndef __cplusplus
  #error "Cython files generated with the C++ option must be compiled with a C++ compiler."
#endif
#ifndef CYTHON_INLINE
  #if defined(__clang__)
    #define CYTHON_INLINE __inline__ __attribute__ ((__unused__))
  #else
    #define CYTHON_INLINE inline
  #endif
#endif
template<typename T>
void __Pyx_call_destructor(T& x) {
    x.~T();
}
template<typename T>
class __Pyx_FakeReference {
  public:
    __Pyx_FakeReference() : ptr(NULL) { }
    __Pyx_FakeReference(const T& ref) : ptr(const_cast<T*>(&ref)) { }
    T *operator->() { return ptr; }
    T *operator&() { return ptr; }
    operator T&() { return *ptr; }
    template<typename U> bool operator ==(const U& other) const { return *ptr == other; }
    template<typename U> bool operator !=(const U& other) const { return *ptr != other; }
    template<typename U> bool operator==(const __Pyx_FakeReference<U>& other) const { return *ptr == *other.ptr; }
    template<typename U> bool operator!=(const __Pyx_FakeReference<U>& other) const { return *ptr != *other.ptr; }
  private:
    T *ptr;
};

#define __PYX_BUILD_PY_SSIZE_T "n"
#define CYTHON_FORMAT_SSIZE_T "z"
#if PY_MAJOR_VERSION < 3
  #define __Pyx_BUILTIN_MODULE_NAME "__builtin__"
  #define __Pyx_DefaultClassType PyClass_Type
  #define __Pyx_PyCode_New(a, p, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\
          PyCode_New(a+k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
#else
  #define __Pyx_BUILTIN_MODULE_NAME "builtins"
  #define __Pyx_DefaultClassType PyType_Type
#if CYTHON_COMPILING_IN_LIMITED_API
    static CYTHON_INLINE PyObject* __Pyx_PyCode_New(int a, int p, int k, int l, int s, int f,
                                                    PyObject *code, PyObject *c, PyObject* n, PyObject *v,
                                                    PyObject *fv, PyObject *cell, PyObject* fn,
                                                    PyObject *name, int fline, PyObject *lnos) {
        PyObject *exception_table = NULL;
        PyObject *types_module=NULL, *code_type=NULL, *result=NULL;
        #if __PYX_LIMITED_VERSION_HEX < 0x030B0000
        PyObject *version_info;
        PyObject *py_minor_version = NULL;
        #endif
        long minor_version = 0;
        PyObject *type, *value, *traceback;
        PyErr_Fetch(&type, &value, &traceback);
        #if __PYX_LIMITED_VERSION_HEX >= 0x030B0000
        minor_version = 11;
        #else
        if (!(version_info = PySys_GetObject("version_info"))) goto end;
        if (!(py_minor_version = PySequence_GetItem(version_info, 1))) goto end;
        minor_version = PyLong_AsLong(py_minor_version);
        Py_DECREF(py_minor_version);
        if (minor_version == -1 && PyErr_Occurred()) goto end;
        #endif
        if (!(types_module = PyImport_ImportModule("types"))) goto end;
        if (!(code_type = PyObject_GetAttrString(types_module, "CodeType"))) goto end;
        if (minor_version <= 7) {
            (void)p;
            result = PyObject_CallFunction(code_type, "iiiiiOOOOOOiOO", a, k, l, s, f, code,
                          c, n, v, fn, name, fline, lnos, fv, cell);
        } else if (minor_version <= 10) {
            result = PyObject_CallFunction(code_type, "iiiiiiOOOOOOiOO", a,p, k, l, s, f, code,
                          c, n, v, fn, name, fline, lnos, fv, cell);
        } else {
            if (!(exception_table = PyBytes_FromStringAndSize(NULL, 0))) goto end;
            result = PyObject_CallFunction(code_type, "iiiiiiOOOOOOOiOO", a,p, k, l, s, f, code,
                          c, n, v, fn, name, name, fline, lnos, exception_table, fv, cell);
        }
    end:
        Py_XDECREF(code_type);
        Py_XDECREF(exception_table);
        Py_XDECREF(types_module);
        if (type) {
            PyErr_Restore(type, value, traceback);
        }
        return result;
    }
    #ifndef CO_OPTIMIZED
    #define CO_OPTIMIZED 0x0001
    #endif
    #ifndef CO_NEWLOCALS
    #define CO_NEWLOCALS 0x0002
    #endif
    #ifndef CO_VARARGS
    #define CO_VARARGS 0x0004
    #endif
    #ifndef CO_VARKEYWORDS
    #define CO_VARKEYWORDS 0x0008
    #endif
    #ifndef CO_ASYNC_GENERATOR
    #define CO_ASYNC_GENERATOR 0x0200
    #endif
    #ifndef CO_GENERATOR
    #define CO_GENERATOR 0x0020
    #endif
    #ifndef CO_COROUTINE
    #define CO_COROUTINE 0x0080
    #endif
#elif PY_VERSION_HEX >= 0x030B0000
  static CYTHON_INLINE PyCodeObject* __Pyx_PyCode_New(int a, int p, int k, int l, int s, int f,
                                                    PyObject *code, PyObject *c, PyObject* n, PyObject *v,
                                                    PyObject *fv, PyObject *cell, PyObject* fn,
                                                    PyObject *name, int fline, PyObject *lnos) {
    PyCodeObject *result;
    PyObject *empty_bytes = PyBytes_FromStringAndSize("", 0);
    if (!empty_bytes) return NULL;
    result =
      #if PY_VERSION_HEX >= 0x030C0000
        PyUnstable_Code_NewWithPosOnlyArgs
      #else
        PyCode_NewWithPosOnlyArgs
      #endif
        (a, p, k, l, s, f, code, c, n, v, fv, cell, fn, name, name, fline, lnos, empty_bytes);
    Py_DECREF(empty_bytes);
    return result;
  }
#elif PY_VERSION_HEX >= 0x030800B2 && !CYTHON_COMPILING_IN_PYPY
  #define __Pyx_PyCode_New(a, p, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\
          PyCode_NewWithPosOnlyArgs(a, p, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
#else
  #define __Pyx_PyCode_New(a, p, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\
          PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
#endif
#endif
#if PY_VERSION_HEX >= 0x030900A4 || defined(Py_IS_TYPE)
  #define __Pyx_IS_TYPE(ob, type) Py_IS_TYPE(ob, type)
#else
  #define __Pyx_IS_TYPE(ob, type) (((const PyObject*)ob)->ob_type == (type))
#endif
#if PY_VERSION_HEX >= 0x030A00B1 || defined(Py_Is)
  #define __Pyx_Py_Is(x, y)  Py_Is(x, y)
#else
  #define __Pyx_Py_Is(x, y) ((x) == (y))
#endif
#if PY_VERSION_HEX >= 0x030A00B1 || defined(Py_IsNone)
  #define __Pyx_Py_IsNone(ob) Py_IsNone(ob)
#else
  #define __Pyx_Py_IsNone(ob) __Pyx_Py_Is((ob), Py_None)
#endif
#if PY_VERSION_HEX >= 0x030A00B1 || defined(Py_IsTrue)
  #define __Pyx_Py_IsTrue(ob) Py_IsTrue(ob)
#else
  #define __Pyx_Py_IsTrue(ob) __Pyx_Py_Is((ob), Py_True)
#endif
#if PY_VERSION_HEX >= 0x030A00B1 || defined(Py_IsFalse)
  #define __Pyx_Py_IsFalse(ob) Py_IsFalse(ob)
#else
  #define __Pyx_Py_IsFalse(ob) __Pyx_Py_Is((ob), Py_False)
#endif
#define __Pyx_NoneAsNull(obj)  (__Pyx_Py_IsNone(obj) ? NULL : (obj))
#if PY_VERSION_HEX >= 0x030900F0 && !CYTHON_COMPILING_IN_PYPY
  #define __Pyx_PyObject_GC_IsFinalized(o) PyObject_GC_IsFinalized(o)
#else
  #define __Pyx_PyObject_GC_IsFinalized(o) _PyGC_FINALIZED(o)
#endif
#ifndef CO_COROUTINE
  #define CO_COROUTINE 0x80
#endif
#ifndef CO_ASYNC_GENERATOR
  #define CO_ASYNC_GENERATOR 0x200
#endif
#ifndef Py_TPFLAGS_CHECKTYPES
  #define Py_TPFLAGS_CHECKTYPES 0
#endif
#ifndef Py_TPFLAGS_HAVE_INDEX
  #define Py_TPFLAGS_HAVE_INDEX 0
#endif
#ifndef Py_TPFLAGS_HAVE_NEWBUFFER
  #define Py_TPFLAGS_HAVE_NEWBUFFER 0
#endif
#ifndef Py_TPFLAGS_HAVE_FINALIZE
  #define Py_TPFLAGS_HAVE_FINALIZE 0
#endif
#ifndef Py_TPFLAGS_SEQUENCE
  #define Py_TPFLAGS_SEQUENCE 0
#endif
#ifndef Py_TPFLAGS_MAPPING
  #define Py_TPFLAGS_MAPPING 0
#endif
#ifndef METH_STACKLESS
  #define METH_STACKLESS 0
#endif
#if PY_VERSION_HEX <= 0x030700A3 || !defined(METH_FASTCALL)
  #ifndef METH_FASTCALL
     #define METH_FASTCALL 0x80
  #endif
  typedef PyObject *(*__Pyx_PyCFunctionFast) (PyObject *self, PyObject *const *args, Py_ssize_t nargs);
  typedef PyObject *(*__Pyx_PyCFunctionFastWithKeywords) (PyObject *self, PyObject *const *args,
                                                          Py_ssize_t nargs, PyObject *kwnames);
#else
  #if PY_VERSION_HEX >= 0x030d00A4
  #  define __Pyx_PyCFunctionFast PyCFunctionFast
  #  define __Pyx_PyCFunctionFastWithKeywords PyCFunctionFastWithKeywords
  #else
  #  define __Pyx_PyCFunctionFast _PyCFunctionFast
  #  define __Pyx_PyCFunctionFastWithKeywords _PyCFunctionFastWithKeywords
  #endif
#endif
#if CYTHON_METH_FASTCALL
  #define __Pyx_METH_FASTCALL METH_FASTCALL
  #define __Pyx_PyCFunction_FastCall __Pyx_PyCFunctionFast
  #define __Pyx_PyCFunction_FastCallWithKeywords __Pyx_PyCFunctionFastWithKeywords
#else
  #define __Pyx_METH_FASTCALL METH_VARARGS
  #define __Pyx_PyCFunction_FastCall PyCFunction
  #define __Pyx_PyCFunction_FastCallWithKeywords PyCFunctionWithKeywords
#endif
#if CYTHON_VECTORCALL
  #define __pyx_vectorcallfunc vectorcallfunc
  #define __Pyx_PY_VECTORCALL_ARGUMENTS_OFFSET  PY_VECTORCALL_ARGUMENTS_OFFSET
  #define __Pyx_PyVectorcall_NARGS(n)  PyVectorcall_NARGS((size_t)(n))
#elif CYTHON_BACKPORT_VECTORCALL
  typedef PyObject *(*__pyx_vectorcallfunc)(PyObject *callable, PyObject *const *args,
                                            size_t nargsf, PyObject *kwnames);
  #define __Pyx_PY_VECTORCALL_ARGUMENTS_OFFSET  ((size_t)1 << (8 * sizeof(size_t) - 1))
  #define __Pyx_PyVectorcall_NARGS(n)  ((Py_ssize_t)(((size_t)(n)) & ~__Pyx_PY_VECTORCALL_ARGUMENTS_OFFSET))
#else
  #define __Pyx_PY_VECTORCALL_ARGUMENTS_OFFSET  0
  #define __Pyx_PyVectorcall_NARGS(n)  ((Py_ssize_t)(n))
#endif
#if PY_MAJOR_VERSION >= 0x030900B1
#define __Pyx_PyCFunction_CheckExact(func)  PyCFunction_CheckExact(func)
#else
#define __Pyx_PyCFunction_CheckExact(func)  PyCFunction_Check(func)
#endif
#define __Pyx_CyOrPyCFunction_Check(func)  PyCFunction_Check(func)
#if CYTHON_COMPILING_IN_CPYTHON
#define __Pyx_CyOrPyCFunction_GET_FUNCTION(func)  (((PyCFunctionObject*)(func))->m_ml->ml_meth)
#elif !CYTHON_COMPILING_IN_LIMITED_API
#define __Pyx_CyOrPyCFunction_GET_FUNCTION(func)  PyCFunction_GET_FUNCTION(func)
#endif
#if CYTHON_COMPILING_IN_CPYTHON
#define __Pyx_CyOrPyCFunction_GET_FLAGS(func)  (((PyCFunctionObject*)(func))->m_ml->ml_flags)
static CYTHON_INLINE PyObject* __Pyx_CyOrPyCFunction_GET_SELF(PyObject *func) {
    return (__Pyx_CyOrPyCFunction_GET_FLAGS(func) & METH_STATIC) ? NULL : ((PyCFunctionObject*)func)->m_self;
}
#endif
static CYTHON_INLINE int __Pyx__IsSameCFunction(PyObject *func, void *cfunc) {
#if CYTHON_COMPILING_IN_LIMITED_API
    return PyCFunction_Check(func) && PyCFunction_GetFunction(func) == (PyCFunction) cfunc;
#else
    return PyCFunction_Check(func) && PyCFunction_GET_FUNCTION(func) == (PyCFunction) cfunc;
#endif
}
#define __Pyx_IsSameCFunction(func, cfunc)   __Pyx__IsSameCFunction(func, cfunc)
#if __PYX_LIMITED_VERSION_HEX < 0x030900B1
  #define __Pyx_PyType_FromModuleAndSpec(m, s, b)  ((void)m, PyType_FromSpecWithBases(s, b))
  typedef PyObject *(*__Pyx_PyCMethod)(PyObject *, PyTypeObject *, PyObject *const *, size_t, PyObject *);
#else
  #define __Pyx_PyType_FromModuleAndSpec(m, s, b)  PyType_FromModuleAndSpec(m, s, b)
  #define __Pyx_PyCMethod  PyCMethod
#endif
#ifndef METH_METHOD
  #define METH_METHOD 0x200
#endif
#if CYTHON_COMPILING_IN_PYPY && !defined(PyObject_Malloc)
  #define PyObject_Malloc(s)   PyMem_Malloc(s)
  #define PyObject_Free(p)     PyMem_Free(p)
  #define PyObject_Realloc(p)  PyMem_Realloc(p)
#endif
#if CYTHON_COMPILING_IN_LIMITED_API
  #define __Pyx_PyCode_HasFreeVars(co)  (PyCode_GetNumFree(co) > 0)
  #define __Pyx_PyFrame_SetLineNumber(frame, lineno)
#else
  #define __Pyx_PyCode_HasFreeVars(co)  (PyCode_GetNumFree(co) > 0)
  #define __Pyx_PyFrame_SetLineNumber(frame, lineno)  (frame)->f_lineno = (lineno)
#endif
#if CYTHON_COMPILING_IN_LIMITED_API
  #define __Pyx_PyThreadState_Current PyThreadState_Get()
#elif !CYTHON_FAST_THREAD_STATE
  #define __Pyx_PyThreadState_Current PyThreadState_GET()
#elif PY_VERSION_HEX >= 0x030d00A1
  #define __Pyx_PyThreadState_Current PyThreadState_GetUnchecked()
#elif PY_VERSION_HEX >= 0x03060000
  #define __Pyx_PyThreadState_Current _PyThreadState_UncheckedGet()
#elif PY_VERSION_HEX >= 0x03000000
  #define __Pyx_PyThreadState_Current PyThreadState_GET()
#else
  #define __Pyx_PyThreadState_Current _PyThreadState_Current
#endif
#if CYTHON_COMPILING_IN_LIMITED_API
static CYTHON_INLINE void *__Pyx_PyModule_GetState(PyObject *op)
{
    void *result;
    result = PyModule_GetState(op);
    if (!result)
        Py_FatalError("Couldn't find the module state");
    return result;
}
#endif
#define __Pyx_PyObject_GetSlot(obj, name, func_ctype)  __Pyx_PyType_GetSlot(Py_TYPE(obj), name, func_ctype)
#if CYTHON_COMPILING_IN_LIMITED_API
  #define __Pyx_PyType_GetSlot(type, name, func_ctype)  ((func_ctype) PyType_GetSlot((type), Py_##name))
#else
  #define __Pyx_PyType_GetSlot(type, name, func_ctype)  ((type)->name)
#endif
#if PY_VERSION_HEX < 0x030700A2 && !defined(PyThread_tss_create) && !defined(Py_tss_NEEDS_INIT)
#include "pythread.h"
#define Py_tss_NEEDS_INIT 0
typedef int Py_tss_t;
static CYTHON_INLINE int PyThread_tss_create(Py_tss_t *key) {
  *key = PyThread_create_key();
  return 0;
}
static CYTHON_INLINE Py_tss_t * PyThread_tss_alloc(void) {
  Py_tss_t *key = (Py_tss_t *)PyObject_Malloc(sizeof(Py_tss_t));
  *key = Py_tss_NEEDS_INIT;
  return key;
}
static CYTHON_INLINE void PyThread_tss_free(Py_tss_t *key) {
  PyObject_Free(key);
}
static CYTHON_INLINE int PyThread_tss_is_created(Py_tss_t *key) {
  return *key != Py_tss_NEEDS_INIT;
}
static CYTHON_INLINE void PyThread_tss_delete(Py_tss_t *key) {
  PyThread_delete_key(*key);
  *key = Py_tss_NEEDS_INIT;
}
static CYTHON_INLINE int PyThread_tss_set(Py_tss_t *key, void *value) {
  return PyThread_set_key_value(*key, value);
}
static CYTHON_INLINE void * PyThread_tss_get(Py_tss_t *key) {
  return PyThread_get_key_value(*key);
}
#endif
#if PY_MAJOR_VERSION < 3
    #if CYTHON_COMPILING_IN_PYPY
        #if PYPY_VERSION_NUM < 0x07030600
            #if defined(__cplusplus) && __cplusplus >= 201402L
                [[deprecated("`with nogil:` inside a nogil function will not release the GIL in PyPy2 < 7.3.6")]]
            #elif defined(__GNUC__) || defined(__clang__)
                __attribute__ ((__deprecated__("`with nogil:` inside a nogil function will not release the GIL in PyPy2 < 7.3.6")))
            #elif defined(_MSC_VER)
                __declspec(deprecated("`with nogil:` inside a nogil function will not release the GIL in PyPy2 < 7.3.6"))
            #endif
            static CYTHON_INLINE int PyGILState_Check(void) {
                return 0;
            }
        #else  // PYPY_VERSION_NUM < 0x07030600
        #endif  // PYPY_VERSION_NUM < 0x07030600
    #else
        static CYTHON_INLINE int PyGILState_Check(void) {
            PyThreadState * tstate = _PyThreadState_Current;
            return tstate && (tstate == PyGILState_GetThisThreadState());
        }
    #endif
#endif
#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX < 0x030d0000 || defined(_PyDict_NewPresized)
#define __Pyx_PyDict_NewPresized(n)  ((n <= 8) ? PyDict_New() : _PyDict_NewPresized(n))
#else
#define __Pyx_PyDict_NewPresized(n)  PyDict_New()
#endif
#if PY_MAJOR_VERSION >= 3 || CYTHON_FUTURE_DIVISION
  #define __Pyx_PyNumber_Divide(x,y)         PyNumber_TrueDivide(x,y)
  #define __Pyx_PyNumber_InPlaceDivide(x,y)  PyNumber_InPlaceTrueDivide(x,y)
#else
  #define __Pyx_PyNumber_Divide(x,y)         PyNumber_Divide(x,y)
  #define __Pyx_PyNumber_InPlaceDivide(x,y)  PyNumber_InPlaceDivide(x,y)
#endif
#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX > 0x030600B4 && PY_VERSION_HEX < 0x030d0000 && CYTHON_USE_UNICODE_INTERNALS
#define __Pyx_PyDict_GetItemStrWithError(dict, name)  _PyDict_GetItem_KnownHash(dict, name, ((PyASCIIObject *) name)->hash)
static CYTHON_INLINE PyObject * __Pyx_PyDict_GetItemStr(PyObject *dict, PyObject *name) {
    PyObject *res = __Pyx_PyDict_GetItemStrWithError(dict, name);
    if (res == NULL) PyErr_Clear();
    return res;
}
#elif PY_MAJOR_VERSION >= 3 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07020000)
#define __Pyx_PyDict_GetItemStrWithError  PyDict_GetItemWithError
#define __Pyx_PyDict_GetItemStr           PyDict_GetItem
#else
static CYTHON_INLINE PyObject * __Pyx_PyDict_GetItemStrWithError(PyObject *dict, PyObject *name) {
#if CYTHON_COMPILING_IN_PYPY
    return PyDict_GetItem(dict, name);
#else
    PyDictEntry *ep;
    PyDictObject *mp = (PyDictObject*) dict;
    long hash = ((PyStringObject *) name)->ob_shash;
    assert(hash != -1);
    ep = (mp->ma_lookup)(mp, name, hash);
    if (ep == NULL) {
        return NULL;
    }
    return ep->me_value;
#endif
}
#define __Pyx_PyDict_GetItemStr           PyDict_GetItem
#endif
#if CYTHON_USE_TYPE_SLOTS
  #define __Pyx_PyType_GetFlags(tp)   (((PyTypeObject *)tp)->tp_flags)
  #define __Pyx_PyType_HasFeature(type, feature)  ((__Pyx_PyType_GetFlags(type) & (feature)) != 0)
  #define __Pyx_PyObject_GetIterNextFunc(obj)  (Py_TYPE(obj)->tp_iternext)
#else
  #define __Pyx_PyType_GetFlags(tp)   (PyType_GetFlags((PyTypeObject *)tp))
  #define __Pyx_PyType_HasFeature(type, feature)  PyType_HasFeature(type, feature)
  #define __Pyx_PyObject_GetIterNextFunc(obj)  PyIter_Next
#endif
#if CYTHON_COMPILING_IN_LIMITED_API
  #define __Pyx_SetItemOnTypeDict(tp, k, v) PyObject_GenericSetAttr((PyObject*)tp, k, v)
#else
  #define __Pyx_SetItemOnTypeDict(tp, k, v) PyDict_SetItem(tp->tp_dict, k, v)
#endif
#if CYTHON_USE_TYPE_SPECS && PY_VERSION_HEX >= 0x03080000
#define __Pyx_PyHeapTypeObject_GC_Del(obj)  {\
    PyTypeObject *type = Py_TYPE((PyObject*)obj);\
    assert(__Pyx_PyType_HasFeature(type, Py_TPFLAGS_HEAPTYPE));\
    PyObject_GC_Del(obj);\
    Py_DECREF(type);\
}
#else
#define __Pyx_PyHeapTypeObject_GC_Del(obj)  PyObject_GC_Del(obj)
#endif
#if CYTHON_COMPILING_IN_LIMITED_API
  #define CYTHON_PEP393_ENABLED 1
  #define __Pyx_PyUnicode_READY(op)       (0)
  #define __Pyx_PyUnicode_GET_LENGTH(u)   PyUnicode_GetLength(u)
  #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_ReadChar(u, i)
  #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u)   ((void)u, 1114111U)
  #define __Pyx_PyUnicode_KIND(u)         ((void)u, (0))
  #define __Pyx_PyUnicode_DATA(u)         ((void*)u)
  #define __Pyx_PyUnicode_READ(k, d, i)   ((void)k, PyUnicode_ReadChar((PyObject*)(d), i))
  #define __Pyx_PyUnicode_IS_TRUE(u)      (0 != PyUnicode_GetLength(u))
#elif PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND)
  #define CYTHON_PEP393_ENABLED 1
  #if PY_VERSION_HEX >= 0x030C0000
    #define __Pyx_PyUnicode_READY(op)       (0)
  #else
    #define __Pyx_PyUnicode_READY(op)       (likely(PyUnicode_IS_READY(op)) ?\
                                                0 : _PyUnicode_Ready((PyObject *)(op)))
  #endif
  #define __Pyx_PyUnicode_GET_LENGTH(u)   PyUnicode_GET_LENGTH(u)
  #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i)
  #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u)   PyUnicode_MAX_CHAR_VALUE(u)
  #define __Pyx_PyUnicode_KIND(u)         ((int)PyUnicode_KIND(u))
  #define __Pyx_PyUnicode_DATA(u)         PyUnicode_DATA(u)
  #define __Pyx_PyUnicode_READ(k, d, i)   PyUnicode_READ(k, d, i)
  #define __Pyx_PyUnicode_WRITE(k, d, i, ch)  PyUnicode_WRITE(k, d, i, (Py_UCS4) ch)
  #if PY_VERSION_HEX >= 0x030C0000
    #define __Pyx_PyUnicode_IS_TRUE(u)      (0 != PyUnicode_GET_LENGTH(u))
  #else
    #if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x03090000
    #define __Pyx_PyUnicode_IS_TRUE(u)      (0 != (likely(PyUnicode_IS_READY(u)) ? PyUnicode_GET_LENGTH(u) : ((PyCompactUnicodeObject *)(u))->wstr_length))
    #else
    #define __Pyx_PyUnicode_IS_TRUE(u)      (0 != (likely(PyUnicode_IS_READY(u)) ? PyUnicode_GET_LENGTH(u) : PyUnicode_GET_SIZE(u)))
    #endif
  #endif
#else
  #define CYTHON_PEP393_ENABLED 0
  #define PyUnicode_1BYTE_KIND  1
  #define PyUnicode_2BYTE_KIND  2
  #define PyUnicode_4BYTE_KIND  4
  #define __Pyx_PyUnicode_READY(op)       (0)
  #define __Pyx_PyUnicode_GET_LENGTH(u)   PyUnicode_GET_SIZE(u)
  #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i]))
  #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u)   ((sizeof(Py_UNICODE) == 2) ? 65535U : 1114111U)
  #define __Pyx_PyUnicode_KIND(u)         ((int)sizeof(Py_UNICODE))
  #define __Pyx_PyUnicode_DATA(u)         ((void*)PyUnicode_AS_UNICODE(u))
  #define __Pyx_PyUnicode_READ(k, d, i)   ((void)(k), (Py_UCS4)(((Py_UNICODE*)d)[i]))
  #define __Pyx_PyUnicode_WRITE(k, d, i, ch)  (((void)(k)), ((Py_UNICODE*)d)[i] = (Py_UNICODE) ch)
  #define __Pyx_PyUnicode_IS_TRUE(u)      (0 != PyUnicode_GET_SIZE(u))
#endif
#if CYTHON_COMPILING_IN_PYPY
  #define __Pyx_PyUnicode_Concat(a, b)      PyNumber_Add(a, b)
  #define __Pyx_PyUnicode_ConcatSafe(a, b)  PyNumber_Add(a, b)
#else
  #define __Pyx_PyUnicode_Concat(a, b)      PyUnicode_Concat(a, b)
  #define __Pyx_PyUnicode_ConcatSafe(a, b)  ((unlikely((a) == Py_None) || unlikely((b) == Py_None)) ?\
      PyNumber_Add(a, b) : __Pyx_PyUnicode_Concat(a, b))
#endif
#if CYTHON_COMPILING_IN_PYPY
  #if !defined(PyUnicode_DecodeUnicodeEscape)
    #define PyUnicode_DecodeUnicodeEscape(s, size, errors)  PyUnicode_Decode(s, size, "unicode_escape", errors)
  #endif
  #if !defined(PyUnicode_Contains) || (PY_MAJOR_VERSION == 2 && PYPY_VERSION_NUM < 0x07030500)
    #undef PyUnicode_Contains
    #define PyUnicode_Contains(u, s)  PySequence_Contains(u, s)
  #endif
  #if !defined(PyByteArray_Check)
    #define PyByteArray_Check(obj)  PyObject_TypeCheck(obj, &PyByteArray_Type)
  #endif
  #if !defined(PyObject_Format)
    #define PyObject_Format(obj, fmt)  PyObject_CallMethod(obj, "__format__", "O", fmt)
  #endif
#endif
#define __Pyx_PyString_FormatSafe(a, b)   ((unlikely((a) == Py_None || (PyString_Check(b) && !PyString_CheckExact(b)))) ? PyNumber_Remainder(a, b) : __Pyx_PyString_Format(a, b))
#define __Pyx_PyUnicode_FormatSafe(a, b)  ((unlikely((a) == Py_None || (PyUnicode_Check(b) && !PyUnicode_CheckExact(b)))) ? PyNumber_Remainder(a, b) : PyUnicode_Format(a, b))
#if PY_MAJOR_VERSION >= 3
  #define __Pyx_PyString_Format(a, b)  PyUnicode_Format(a, b)
#else
  #define __Pyx_PyString_Format(a, b)  PyString_Format(a, b)
#endif
#if PY_MAJOR_VERSION < 3 && !defined(PyObject_ASCII)
  #define PyObject_ASCII(o)            PyObject_Repr(o)
#endif
#if PY_MAJOR_VERSION >= 3
  #define PyBaseString_Type            PyUnicode_Type
  #define PyStringObject               PyUnicodeObject
  #define PyString_Type                PyUnicode_Type
  #define PyString_Check               PyUnicode_Check
  #define PyString_CheckExact          PyUnicode_CheckExact
#ifndef PyObject_Unicode
  #define PyObject_Unicode             PyObject_Str
#endif
#endif
#if PY_MAJOR_VERSION >= 3
  #define __Pyx_PyBaseString_Check(obj) PyUnicode_Check(obj)
  #define __Pyx_PyBaseString_CheckExact(obj) PyUnicode_CheckExact(obj)
#else
  #define __Pyx_PyBaseString_Check(obj) (PyString_Check(obj) || PyUnicode_Check(obj))
  #define __Pyx_PyBaseString_CheckExact(obj) (PyString_CheckExact(obj) || PyUnicode_CheckExact(obj))
#endif
#if CYTHON_COMPILING_IN_CPYTHON
  #define __Pyx_PySequence_ListKeepNew(obj)\
    (likely(PyList_CheckExact(obj) && Py_REFCNT(obj) == 1) ? __Pyx_NewRef(obj) : PySequence_List(obj))
#else
  #define __Pyx_PySequence_ListKeepNew(obj)  PySequence_List(obj)
#endif
#ifndef PySet_CheckExact
  #define PySet_CheckExact(obj)        __Pyx_IS_TYPE(obj, &PySet_Type)
#endif
#if PY_VERSION_HEX >= 0x030900A4
  #define __Pyx_SET_REFCNT(obj, refcnt) Py_SET_REFCNT(obj, refcnt)
  #define __Pyx_SET_SIZE(obj, size) Py_SET_SIZE(obj, size)
#else
  #define __Pyx_SET_REFCNT(obj, refcnt) Py_REFCNT(obj) = (refcnt)
  #define __Pyx_SET_SIZE(obj, size) Py_SIZE(obj) = (size)
#endif
#if CYTHON_ASSUME_SAFE_MACROS
  #define __Pyx_PySequence_ITEM(o, i) PySequence_ITEM(o, i)
  #define __Pyx_PySequence_SIZE(seq)  Py_SIZE(seq)
  #define __Pyx_PyTuple_SET_ITEM(o, i, v) (PyTuple_SET_ITEM(o, i, v), (0))
  #define __Pyx_PyList_SET_ITEM(o, i, v) (PyList_SET_ITEM(o, i, v), (0))
  #define __Pyx_PyTuple_GET_SIZE(o) PyTuple_GET_SIZE(o)
  #define __Pyx_PyList_GET_SIZE(o) PyList_GET_SIZE(o)
  #define __Pyx_PySet_GET_SIZE(o) PySet_GET_SIZE(o)
  #define __Pyx_PyBytes_GET_SIZE(o) PyBytes_GET_SIZE(o)
  #define __Pyx_PyByteArray_GET_SIZE(o) PyByteArray_GET_SIZE(o)
#else
  #define __Pyx_PySequence_ITEM(o, i) PySequence_GetItem(o, i)
  #define __Pyx_PySequence_SIZE(seq)  PySequence_Size(seq)
  #define __Pyx_PyTuple_SET_ITEM(o, i, v) PyTuple_SetItem(o, i, v)
  #define __Pyx_PyList_SET_ITEM(o, i, v) PyList_SetItem(o, i, v)
  #define __Pyx_PyTuple_GET_SIZE(o) PyTuple_Size(o)
  #define __Pyx_PyList_GET_SIZE(o) PyList_Size(o)
  #define __Pyx_PySet_GET_SIZE(o) PySet_Size(o)
  #define __Pyx_PyBytes_GET_SIZE(o) PyBytes_Size(o)
  #define __Pyx_PyByteArray_GET_SIZE(o) PyByteArray_Size(o)
#endif
#if __PYX_LIMITED_VERSION_HEX >= 0x030d00A1
  #define __Pyx_PyImport_AddModuleRef(name) PyImport_AddModuleRef(name)
#else
  static CYTHON_INLINE PyObject *__Pyx_PyImport_AddModuleRef(const char *name) {
      PyObject *module = PyImport_AddModule(name);
      Py_XINCREF(module);
      return module;
  }
#endif
#if PY_MAJOR_VERSION >= 3
  #define PyIntObject                  PyLongObject
  #define PyInt_Type                   PyLong_Type
  #define PyInt_Check(op)              PyLong_Check(op)
  #define PyInt_CheckExact(op)         PyLong_CheckExact(op)
  #define __Pyx_Py3Int_Check(op)       PyLong_Check(op)
  #define __Pyx_Py3Int_CheckExact(op)  PyLong_CheckExact(op)
  #define PyInt_FromString             PyLong_FromString
  #define PyInt_FromUnicode            PyLong_FromUnicode
  #define PyInt_FromLong               PyLong_FromLong
  #define PyInt_FromSize_t             PyLong_FromSize_t
  #define PyInt_FromSsize_t            PyLong_FromSsize_t
  #define PyInt_AsLong                 PyLong_AsLong
  #define PyInt_AS_LONG                PyLong_AS_LONG
  #define PyInt_AsSsize_t              PyLong_AsSsize_t
  #define PyInt_AsUnsignedLongMask     PyLong_AsUnsignedLongMask
  #define PyInt_AsUnsignedLongLongMask PyLong_AsUnsignedLongLongMask
  #define PyNumber_Int                 PyNumber_Long
#else
  #define __Pyx_Py3Int_Check(op)       (PyLong_Check(op) || PyInt_Check(op))
  #define __Pyx_Py3Int_CheckExact(op)  (PyLong_CheckExact(op) || PyInt_CheckExact(op))
#endif
#if PY_MAJOR_VERSION >= 3
  #define PyBoolObject                 PyLongObject
#endif
#if PY_MAJOR_VERSION >= 3 && CYTHON_COMPILING_IN_PYPY
  #ifndef PyUnicode_InternFromString
    #define PyUnicode_InternFromString(s) PyUnicode_FromString(s)
  #endif
#endif
#if PY_VERSION_HEX < 0x030200A4
  typedef long Py_hash_t;
  #define __Pyx_PyInt_FromHash_t PyInt_FromLong
  #define __Pyx_PyInt_AsHash_t   __Pyx_PyIndex_AsHash_t
#else
  #define __Pyx_PyInt_FromHash_t PyInt_FromSsize_t
  #define __Pyx_PyInt_AsHash_t   __Pyx_PyIndex_AsSsize_t
#endif
#if CYTHON_USE_ASYNC_SLOTS
  #if PY_VERSION_HEX >= 0x030500B1
    #define __Pyx_PyAsyncMethodsStruct PyAsyncMethods
    #define __Pyx_PyType_AsAsync(obj) (Py_TYPE(obj)->tp_as_async)
  #else
    #define __Pyx_PyType_AsAsync(obj) ((__Pyx_PyAsyncMethodsStruct*) (Py_TYPE(obj)->tp_reserved))
  #endif
#else
  #define __Pyx_PyType_AsAsync(obj) NULL
#endif
#ifndef __Pyx_PyAsyncMethodsStruct
    typedef struct {
        unaryfunc am_await;
        unaryfunc am_aiter;
        unaryfunc am_anext;
    } __Pyx_PyAsyncMethodsStruct;
#endif

#if defined(_WIN32) || defined(WIN32) || defined(MS_WINDOWS)
  #if !defined(_USE_MATH_DEFINES)
    #define _USE_MATH_DEFINES
  #endif
#endif
#include <math.h>
#ifdef NAN
#define __PYX_NAN() ((float) NAN)
#else
static CYTHON_INLINE float __PYX_NAN() {
  float value;
  memset(&value, 0xFF, sizeof(value));
  return value;
}
#endif
#if defined(__CYGWIN__) && defined(_LDBL_EQ_DBL)
#define __Pyx_truncl trunc
#else
#define __Pyx_truncl truncl
#endif

#define __PYX_MARK_ERR_POS(f_index, lineno) \
    { __pyx_filename = __pyx_f[f_index]; (void)__pyx_filename; __pyx_lineno = lineno; (void)__pyx_lineno; __pyx_clineno = __LINE__;  (void)__pyx_clineno; }
#define __PYX_ERR(f_index, lineno, Ln_error) \
    { __PYX_MARK_ERR_POS(f_index, lineno) goto Ln_error; }

#ifdef CYTHON_EXTERN_C
    #undef __PYX_EXTERN_C
    #define __PYX_EXTERN_C CYTHON_EXTERN_C
#elif defined(__PYX_EXTERN_C)
    #ifdef _MSC_VER
    #pragma message ("Please do not define the '__PYX_EXTERN_C' macro externally. Use 'CYTHON_EXTERN_C' instead.")
    #else
    #warning Please do not define the '__PYX_EXTERN_C' macro externally. Use 'CYTHON_EXTERN_C' instead.
    #endif
#else
    #define __PYX_EXTERN_C extern "C++"
#endif

#define __PYX_HAVE__dysgu__sv_category
#define __PYX_HAVE_API__dysgu__sv_category
/* Early includes */
#include "ios"
#include "new"
#include "stdexcept"
#include "typeinfo"
#include <vector>
#include <utility>

    #if __cplusplus >= 201103L || (defined(_MSC_VER) && _MSC_VER >= 1600)
    // move should be defined for these versions of MSVC, but __cplusplus isn't set usefully
    #include <type_traits>

    namespace cython_std {
    template <typename T> typename std::remove_reference<T>::type&& move(T& t) noexcept { return std::move(t); }
    template <typename T> typename std::remove_reference<T>::type&& move(T&& t) noexcept { return std::move(t); }
    }

    #endif
    
#include <string.h>
#include <stdio.h>

    /* Using NumPy API declarations from "numpy/__init__.cython-30.pxd" */
    
#include "numpy/arrayobject.h"
#include "numpy/ndarrayobject.h"
#include "numpy/ndarraytypes.h"
#include "numpy/arrayscalars.h"
#include "numpy/ufuncobject.h"
#include <stdint.h>
#include "xxhash64.h"
#include "robin_hood.h"
#include "find_reads.hpp"
#include "graph_objects.hpp"
#include <map>
#ifdef _OPENMP
#include <omp.h>
#endif /* _OPENMP */

#if defined(PYREX_WITHOUT_ASSERTIONS) && !defined(CYTHON_WITHOUT_ASSERTIONS)
#define CYTHON_WITHOUT_ASSERTIONS
#endif

typedef struct {PyObject **p; const char *s; const Py_ssize_t n; const char* encoding;
                const char is_unicode; const char is_str; const char intern; } __Pyx_StringTabEntry;

#define __PYX_DEFAULT_STRING_ENCODING_IS_ASCII 0
#define __PYX_DEFAULT_STRING_ENCODING_IS_UTF8 0
#define __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT (PY_MAJOR_VERSION >= 3 && __PYX_DEFAULT_STRING_ENCODING_IS_UTF8)
#define __PYX_DEFAULT_STRING_ENCODING ""
#define __Pyx_PyObject_FromString __Pyx_PyBytes_FromString
#define __Pyx_PyObject_FromStringAndSize __Pyx_PyBytes_FromStringAndSize
#define __Pyx_uchar_cast(c) ((unsigned char)c)
#define __Pyx_long_cast(x) ((long)x)
#define __Pyx_fits_Py_ssize_t(v, type, is_signed)  (\
    (sizeof(type) < sizeof(Py_ssize_t))  ||\
    (sizeof(type) > sizeof(Py_ssize_t) &&\
          likely(v < (type)PY_SSIZE_T_MAX ||\
                 v == (type)PY_SSIZE_T_MAX)  &&\
          (!is_signed || likely(v > (type)PY_SSIZE_T_MIN ||\
                                v == (type)PY_SSIZE_T_MIN)))  ||\
    (sizeof(type) == sizeof(Py_ssize_t) &&\
          (is_signed || likely(v < (type)PY_SSIZE_T_MAX ||\
                               v == (type)PY_SSIZE_T_MAX)))  )
static CYTHON_INLINE int __Pyx_is_valid_index(Py_ssize_t i, Py_ssize_t limit) {
    return (size_t) i < (size_t) limit;
}
#if defined (__cplusplus) && __cplusplus >= 201103L
    #include <cstdlib>
    #define __Pyx_sst_abs(value) std::abs(value)
#elif SIZEOF_INT >= SIZEOF_SIZE_T
    #define __Pyx_sst_abs(value) abs(value)
#elif SIZEOF_LONG >= SIZEOF_SIZE_T
    #define __Pyx_sst_abs(value) labs(value)
#elif defined (_MSC_VER)
    #define __Pyx_sst_abs(value) ((Py_ssize_t)_abs64(value))
#elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L
    #define __Pyx_sst_abs(value) llabs(value)
#elif defined (__GNUC__)
    #define __Pyx_sst_abs(value) __builtin_llabs(value)
#else
    #define __Pyx_sst_abs(value) ((value<0) ? -value : value)
#endif
static CYTHON_INLINE Py_ssize_t __Pyx_ssize_strlen(const char *s);
static CYTHON_INLINE const char* __Pyx_PyObject_AsString(PyObject*);
static CYTHON_INLINE const char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length);
static CYTHON_INLINE PyObject* __Pyx_PyByteArray_FromString(const char*);
#define __Pyx_PyByteArray_FromStringAndSize(s, l) PyByteArray_FromStringAndSize((const char*)s, l)
#define __Pyx_PyBytes_FromString        PyBytes_FromString
#define __Pyx_PyBytes_FromStringAndSize PyBytes_FromStringAndSize
static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char*);
#if PY_MAJOR_VERSION < 3
    #define __Pyx_PyStr_FromString        __Pyx_PyBytes_FromString
    #define __Pyx_PyStr_FromStringAndSize __Pyx_PyBytes_FromStringAndSize
#else
    #define __Pyx_PyStr_FromString        __Pyx_PyUnicode_FromString
    #define __Pyx_PyStr_FromStringAndSize __Pyx_PyUnicode_FromStringAndSize
#endif
#define __Pyx_PyBytes_AsWritableString(s)     ((char*) PyBytes_AS_STRING(s))
#define __Pyx_PyBytes_AsWritableSString(s)    ((signed char*) PyBytes_AS_STRING(s))
#define __Pyx_PyBytes_AsWritableUString(s)    ((unsigned char*) PyBytes_AS_STRING(s))
#define __Pyx_PyBytes_AsString(s)     ((const char*) PyBytes_AS_STRING(s))
#define __Pyx_PyBytes_AsSString(s)    ((const signed char*) PyBytes_AS_STRING(s))
#define __Pyx_PyBytes_AsUString(s)    ((const unsigned char*) PyBytes_AS_STRING(s))
#define __Pyx_PyObject_AsWritableString(s)    ((char*)(__pyx_uintptr_t) __Pyx_PyObject_AsString(s))
#define __Pyx_PyObject_AsWritableSString(s)    ((signed char*)(__pyx_uintptr_t) __Pyx_PyObject_AsString(s))
#define __Pyx_PyObject_AsWritableUString(s)    ((unsigned char*)(__pyx_uintptr_t) __Pyx_PyObject_AsString(s))
#define __Pyx_PyObject_AsSString(s)    ((const signed char*) __Pyx_PyObject_AsString(s))
#define __Pyx_PyObject_AsUString(s)    ((const unsigned char*) __Pyx_PyObject_AsString(s))
#define __Pyx_PyObject_FromCString(s)  __Pyx_PyObject_FromString((const char*)s)
#define __Pyx_PyBytes_FromCString(s)   __Pyx_PyBytes_FromString((const char*)s)
#define __Pyx_PyByteArray_FromCString(s)   __Pyx_PyByteArray_FromString((const char*)s)
#define __Pyx_PyStr_FromCString(s)     __Pyx_PyStr_FromString((const char*)s)
#define __Pyx_PyUnicode_FromCString(s) __Pyx_PyUnicode_FromString((const char*)s)
#define __Pyx_PyUnicode_FromOrdinal(o)       PyUnicode_FromOrdinal((int)o)
#define __Pyx_PyUnicode_AsUnicode            PyUnicode_AsUnicode
#define __Pyx_NewRef(obj) (Py_INCREF(obj), obj)
#define __Pyx_Owned_Py_None(b) __Pyx_NewRef(Py_None)
static CYTHON_INLINE PyObject * __Pyx_PyBool_FromLong(long b);
static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject*);
static CYTHON_INLINE int __Pyx_PyObject_IsTrueAndDecref(PyObject*);
static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x);
#define __Pyx_PySequence_Tuple(obj)\
    (likely(PyTuple_CheckExact(obj)) ? __Pyx_NewRef(obj) : PySequence_Tuple(obj))
static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject*);
static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t);
static CYTHON_INLINE Py_hash_t __Pyx_PyIndex_AsHash_t(PyObject*);
#if CYTHON_ASSUME_SAFE_MACROS
#define __pyx_PyFloat_AsDouble(x) (PyFloat_CheckExact(x) ? PyFloat_AS_DOUBLE(x) : PyFloat_AsDouble(x))
#else
#define __pyx_PyFloat_AsDouble(x) PyFloat_AsDouble(x)
#endif
#define __pyx_PyFloat_AsFloat(x) ((float) __pyx_PyFloat_AsDouble(x))
#if PY_MAJOR_VERSION >= 3
#define __Pyx_PyNumber_Int(x) (PyLong_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Long(x))
#else
#define __Pyx_PyNumber_Int(x) (PyInt_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Int(x))
#endif
#if CYTHON_USE_PYLONG_INTERNALS
  #if PY_VERSION_HEX >= 0x030C00A7
  #ifndef _PyLong_SIGN_MASK
    #define _PyLong_SIGN_MASK 3
  #endif
  #ifndef _PyLong_NON_SIZE_BITS
    #define _PyLong_NON_SIZE_BITS 3
  #endif
  #define __Pyx_PyLong_Sign(x)  (((PyLongObject*)x)->long_value.lv_tag & _PyLong_SIGN_MASK)
  #define __Pyx_PyLong_IsNeg(x)  ((__Pyx_PyLong_Sign(x) & 2) != 0)
  #define __Pyx_PyLong_IsNonNeg(x)  (!__Pyx_PyLong_IsNeg(x))
  #define __Pyx_PyLong_IsZero(x)  (__Pyx_PyLong_Sign(x) & 1)
  #define __Pyx_PyLong_IsPos(x)  (__Pyx_PyLong_Sign(x) == 0)
  #define __Pyx_PyLong_CompactValueUnsigned(x)  (__Pyx_PyLong_Digits(x)[0])
  #define __Pyx_PyLong_DigitCount(x)  ((Py_ssize_t) (((PyLongObject*)x)->long_value.lv_tag >> _PyLong_NON_SIZE_BITS))
  #define __Pyx_PyLong_SignedDigitCount(x)\
        ((1 - (Py_ssize_t) __Pyx_PyLong_Sign(x)) * __Pyx_PyLong_DigitCount(x))
  #if defined(PyUnstable_Long_IsCompact) && defined(PyUnstable_Long_CompactValue)
    #define __Pyx_PyLong_IsCompact(x)     PyUnstable_Long_IsCompact((PyLongObject*) x)
    #define __Pyx_PyLong_CompactValue(x)  PyUnstable_Long_CompactValue((PyLongObject*) x)
  #else
    #define __Pyx_PyLong_IsCompact(x)     (((PyLongObject*)x)->long_value.lv_tag < (2 << _PyLong_NON_SIZE_BITS))
    #define __Pyx_PyLong_CompactValue(x)  ((1 - (Py_ssize_t) __Pyx_PyLong_Sign(x)) * (Py_ssize_t) __Pyx_PyLong_Digits(x)[0])
  #endif
  typedef Py_ssize_t  __Pyx_compact_pylong;
  typedef size_t  __Pyx_compact_upylong;
  #else
  #define __Pyx_PyLong_IsNeg(x)  (Py_SIZE(x) < 0)
  #define __Pyx_PyLong_IsNonNeg(x)  (Py_SIZE(x) >= 0)
  #define __Pyx_PyLong_IsZero(x)  (Py_SIZE(x) == 0)
  #define __Pyx_PyLong_IsPos(x)  (Py_SIZE(x) > 0)
  #define __Pyx_PyLong_CompactValueUnsigned(x)  ((Py_SIZE(x) == 0) ? 0 : __Pyx_PyLong_Digits(x)[0])
  #define __Pyx_PyLong_DigitCount(x)  __Pyx_sst_abs(Py_SIZE(x))
  #define __Pyx_PyLong_SignedDigitCount(x)  Py_SIZE(x)
  #define __Pyx_PyLong_IsCompact(x)  (Py_SIZE(x) == 0 || Py_SIZE(x) == 1 || Py_SIZE(x) == -1)
  #define __Pyx_PyLong_CompactValue(x)\
        ((Py_SIZE(x) == 0) ? (sdigit) 0 : ((Py_SIZE(x) < 0) ? -(sdigit)__Pyx_PyLong_Digits(x)[0] : (sdigit)__Pyx_PyLong_Digits(x)[0]))
  typedef sdigit  __Pyx_compact_pylong;
  typedef digit  __Pyx_compact_upylong;
  #endif
  #if PY_VERSION_HEX >= 0x030C00A5
  #define __Pyx_PyLong_Digits(x)  (((PyLongObject*)x)->long_value.ob_digit)
  #else
  #define __Pyx_PyLong_Digits(x)  (((PyLongObject*)x)->ob_digit)
  #endif
#endif
#if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII
#include <string.h>
static int __Pyx_sys_getdefaultencoding_not_ascii;
static int __Pyx_init_sys_getdefaultencoding_params(void) {
    PyObject* sys;
    PyObject* default_encoding = NULL;
    PyObject* ascii_chars_u = NULL;
    PyObject* ascii_chars_b = NULL;
    const char* default_encoding_c;
    sys = PyImport_ImportModule("sys");
    if (!sys) goto bad;
    default_encoding = PyObject_CallMethod(sys, (char*) "getdefaultencoding", NULL);
    Py_DECREF(sys);
    if (!default_encoding) goto bad;
    default_encoding_c = PyBytes_AsString(default_encoding);
    if (!default_encoding_c) goto bad;
    if (strcmp(default_encoding_c, "ascii") == 0) {
        __Pyx_sys_getdefaultencoding_not_ascii = 0;
    } else {
        char ascii_chars[128];
        int c;
        for (c = 0; c < 128; c++) {
            ascii_chars[c] = (char) c;
        }
        __Pyx_sys_getdefaultencoding_not_ascii = 1;
        ascii_chars_u = PyUnicode_DecodeASCII(ascii_chars, 128, NULL);
        if (!ascii_chars_u) goto bad;
        ascii_chars_b = PyUnicode_AsEncodedString(ascii_chars_u, default_encoding_c, NULL);
        if (!ascii_chars_b || !PyBytes_Check(ascii_chars_b) || memcmp(ascii_chars, PyBytes_AS_STRING(ascii_chars_b), 128) != 0) {
            PyErr_Format(
                PyExc_ValueError,
                "This module compiled with c_string_encoding=ascii, but default encoding '%.200s' is not a superset of ascii.",
                default_encoding_c);
            goto bad;
        }
        Py_DECREF(ascii_chars_u);
        Py_DECREF(ascii_chars_b);
    }
    Py_DECREF(default_encoding);
    return 0;
bad:
    Py_XDECREF(default_encoding);
    Py_XDECREF(ascii_chars_u);
    Py_XDECREF(ascii_chars_b);
    return -1;
}
#endif
#if __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT && PY_MAJOR_VERSION >= 3
#define __Pyx_PyUnicode_FromStringAndSize(c_str, size) PyUnicode_DecodeUTF8(c_str, size, NULL)
#else
#define __Pyx_PyUnicode_FromStringAndSize(c_str, size) PyUnicode_Decode(c_str, size, __PYX_DEFAULT_STRING_ENCODING, NULL)
#if __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT
#include <string.h>
static char* __PYX_DEFAULT_STRING_ENCODING;
static int __Pyx_init_sys_getdefaultencoding_params(void) {
    PyObject* sys;
    PyObject* default_encoding = NULL;
    char* default_encoding_c;
    sys = PyImport_ImportModule("sys");
    if (!sys) goto bad;
    default_encoding = PyObject_CallMethod(sys, (char*) (const char*) "getdefaultencoding", NULL);
    Py_DECREF(sys);
    if (!default_encoding) goto bad;
    default_encoding_c = PyBytes_AsString(default_encoding);
    if (!default_encoding_c) goto bad;
    __PYX_DEFAULT_STRING_ENCODING = (char*) malloc(strlen(default_encoding_c) + 1);
    if (!__PYX_DEFAULT_STRING_ENCODING) goto bad;
    strcpy(__PYX_DEFAULT_STRING_ENCODING, default_encoding_c);
    Py_DECREF(default_encoding);
    return 0;
bad:
    Py_XDECREF(default_encoding);
    return -1;
}
#endif
#endif


/* Test for GCC > 2.95 */
#if defined(__GNUC__)     && (__GNUC__ > 2 || (__GNUC__ == 2 && (__GNUC_MINOR__ > 95)))
  #define likely(x)   __builtin_expect(!!(x), 1)
  #define unlikely(x) __builtin_expect(!!(x), 0)
#else /* !__GNUC__ or GCC < 2.95 */
  #define likely(x)   (x)
  #define unlikely(x) (x)
#endif /* __GNUC__ */
static CYTHON_INLINE void __Pyx_pretend_to_initialize(void* ptr) { (void)ptr; }

#if !CYTHON_USE_MODULE_STATE
static PyObject *__pyx_m = NULL;
#endif
static int __pyx_lineno;
static int __pyx_clineno = 0;
static const char * __pyx_cfilenm = __FILE__;
static const char *__pyx_filename;

/* Header.proto */
#if !defined(CYTHON_CCOMPLEX)
  #if defined(__cplusplus)
    #define CYTHON_CCOMPLEX 1
  #elif (defined(_Complex_I) && !defined(_MSC_VER)) || ((defined (__STDC_VERSION__) && __STDC_VERSION__ >= 201112L) && !defined(__STDC_NO_COMPLEX__) && !defined(_MSC_VER))
    #define CYTHON_CCOMPLEX 1
  #else
    #define CYTHON_CCOMPLEX 0
  #endif
#endif
#if CYTHON_CCOMPLEX
  #ifdef __cplusplus
    #include <complex>
  #else
    #include <complex.h>
  #endif
#endif
#if CYTHON_CCOMPLEX && !defined(__cplusplus) && defined(__sun__) && defined(__GNUC__)
  #undef _Complex_I
  #define _Complex_I 1.0fj
#endif

/* #### Code section: filename_table ### */

static const char *__pyx_f[] = {
  "<stringsource>",
  "__init__.cython-30.pxd",
  "dysgu/sv_category.pyx",
  "dysgu/sv_category.pxd",
  "type.pxd",
  "dysgu/map_set_utils.pxd",
};
/* #### Code section: utility_code_proto_before_types ### */
/* ForceInitThreads.proto */
#ifndef __PYX_FORCE_INIT_THREADS
  #define __PYX_FORCE_INIT_THREADS 0
#endif

/* #### Code section: numeric_typedefs ### */

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":770
 * # in Cython to enable them only on the right systems.
 * 
 * ctypedef npy_int8       int8_t             # <<<<<<<<<<<<<<
 * ctypedef npy_int16      int16_t
 * ctypedef npy_int32      int32_t
 */
typedef npy_int8 __pyx_t_5numpy_int8_t;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":771
 * 
 * ctypedef npy_int8       int8_t
 * ctypedef npy_int16      int16_t             # <<<<<<<<<<<<<<
 * ctypedef npy_int32      int32_t
 * ctypedef npy_int64      int64_t
 */
typedef npy_int16 __pyx_t_5numpy_int16_t;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":772
 * ctypedef npy_int8       int8_t
 * ctypedef npy_int16      int16_t
 * ctypedef npy_int32      int32_t             # <<<<<<<<<<<<<<
 * ctypedef npy_int64      int64_t
 * #ctypedef npy_int96      int96_t
 */
typedef npy_int32 __pyx_t_5numpy_int32_t;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":773
 * ctypedef npy_int16      int16_t
 * ctypedef npy_int32      int32_t
 * ctypedef npy_int64      int64_t             # <<<<<<<<<<<<<<
 * #ctypedef npy_int96      int96_t
 * #ctypedef npy_int128     int128_t
 */
typedef npy_int64 __pyx_t_5numpy_int64_t;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":777
 * #ctypedef npy_int128     int128_t
 * 
 * ctypedef npy_uint8      uint8_t             # <<<<<<<<<<<<<<
 * ctypedef npy_uint16     uint16_t
 * ctypedef npy_uint32     uint32_t
 */
typedef npy_uint8 __pyx_t_5numpy_uint8_t;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":778
 * 
 * ctypedef npy_uint8      uint8_t
 * ctypedef npy_uint16     uint16_t             # <<<<<<<<<<<<<<
 * ctypedef npy_uint32     uint32_t
 * ctypedef npy_uint64     uint64_t
 */
typedef npy_uint16 __pyx_t_5numpy_uint16_t;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":779
 * ctypedef npy_uint8      uint8_t
 * ctypedef npy_uint16     uint16_t
 * ctypedef npy_uint32     uint32_t             # <<<<<<<<<<<<<<
 * ctypedef npy_uint64     uint64_t
 * #ctypedef npy_uint96     uint96_t
 */
typedef npy_uint32 __pyx_t_5numpy_uint32_t;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":780
 * ctypedef npy_uint16     uint16_t
 * ctypedef npy_uint32     uint32_t
 * ctypedef npy_uint64     uint64_t             # <<<<<<<<<<<<<<
 * #ctypedef npy_uint96     uint96_t
 * #ctypedef npy_uint128    uint128_t
 */
typedef npy_uint64 __pyx_t_5numpy_uint64_t;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":784
 * #ctypedef npy_uint128    uint128_t
 * 
 * ctypedef npy_float32    float32_t             # <<<<<<<<<<<<<<
 * ctypedef npy_float64    float64_t
 * #ctypedef npy_float80    float80_t
 */
typedef npy_float32 __pyx_t_5numpy_float32_t;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":785
 * 
 * ctypedef npy_float32    float32_t
 * ctypedef npy_float64    float64_t             # <<<<<<<<<<<<<<
 * #ctypedef npy_float80    float80_t
 * #ctypedef npy_float128   float128_t
 */
typedef npy_float64 __pyx_t_5numpy_float64_t;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":792
 * ctypedef double complex complex128_t
 * 
 * ctypedef npy_longlong   longlong_t             # <<<<<<<<<<<<<<
 * ctypedef npy_ulonglong  ulonglong_t
 * 
 */
typedef npy_longlong __pyx_t_5numpy_longlong_t;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":793
 * 
 * ctypedef npy_longlong   longlong_t
 * ctypedef npy_ulonglong  ulonglong_t             # <<<<<<<<<<<<<<
 * 
 * ctypedef npy_intp       intp_t
 */
typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":795
 * ctypedef npy_ulonglong  ulonglong_t
 * 
 * ctypedef npy_intp       intp_t             # <<<<<<<<<<<<<<
 * ctypedef npy_uintp      uintp_t
 * 
 */
typedef npy_intp __pyx_t_5numpy_intp_t;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":796
 * 
 * ctypedef npy_intp       intp_t
 * ctypedef npy_uintp      uintp_t             # <<<<<<<<<<<<<<
 * 
 * ctypedef npy_double     float_t
 */
typedef npy_uintp __pyx_t_5numpy_uintp_t;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":798
 * ctypedef npy_uintp      uintp_t
 * 
 * ctypedef npy_double     float_t             # <<<<<<<<<<<<<<
 * ctypedef npy_double     double_t
 * ctypedef npy_longdouble longdouble_t
 */
typedef npy_double __pyx_t_5numpy_float_t;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":799
 * 
 * ctypedef npy_double     float_t
 * ctypedef npy_double     double_t             # <<<<<<<<<<<<<<
 * ctypedef npy_longdouble longdouble_t
 * 
 */
typedef npy_double __pyx_t_5numpy_double_t;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":800
 * ctypedef npy_double     float_t
 * ctypedef npy_double     double_t
 * ctypedef npy_longdouble longdouble_t             # <<<<<<<<<<<<<<
 * 
 * ctypedef float complex       cfloat_t
 */
typedef npy_longdouble __pyx_t_5numpy_longdouble_t;
/* #### Code section: complex_type_declarations ### */
/* Declarations.proto */
#if CYTHON_CCOMPLEX && (1) && (!0 || __cplusplus)
  #ifdef __cplusplus
    typedef ::std::complex< float > __pyx_t_float_complex;
  #else
    typedef float _Complex __pyx_t_float_complex;
  #endif
#else
    typedef struct { float real, imag; } __pyx_t_float_complex;
#endif
static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float, float);

/* Declarations.proto */
#if CYTHON_CCOMPLEX && (1) && (!0 || __cplusplus)
  #ifdef __cplusplus
    typedef ::std::complex< double > __pyx_t_double_complex;
  #else
    typedef double _Complex __pyx_t_double_complex;
  #endif
#else
    typedef struct { double real, imag; } __pyx_t_double_complex;
#endif
static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double, double);

/* Declarations.proto */
#if CYTHON_CCOMPLEX && (1) && (!0 || __cplusplus)
  #ifdef __cplusplus
    typedef ::std::complex< long double > __pyx_t_long_double_complex;
  #else
    typedef long double _Complex __pyx_t_long_double_complex;
  #endif
#else
    typedef struct { long double real, imag; } __pyx_t_long_double_complex;
#endif
static CYTHON_INLINE __pyx_t_long_double_complex __pyx_t_long_double_complex_from_parts(long double, long double);

/* #### Code section: type_declarations ### */

/*--- Type declarations ---*/
struct __pyx_obj_5dysgu_13map_set_utils_Py_BasicIntervalTree;
struct __pyx_obj_5dysgu_13map_set_utils_Py_DiGraph;
struct __pyx_obj_5dysgu_13map_set_utils_Py_SimpleGraph;
struct __pyx_obj_5dysgu_13map_set_utils_Py_Int2IntMap;
struct __pyx_obj_5dysgu_13map_set_utils_Py_IntSet;
struct __pyx_obj_5dysgu_13map_set_utils_EventResult;
struct __pyx_obj_5dysgu_11sv_category_AlignmentItem;

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1096
 * 
 * # Iterator API added in v1.6
 * ctypedef int (*NpyIter_IterNextFunc)(NpyIter* it) noexcept nogil             # <<<<<<<<<<<<<<
 * ctypedef void (*NpyIter_GetMultiIndexFunc)(NpyIter* it, npy_intp* outcoords) noexcept nogil
 * 
 */
typedef int (*__pyx_t_5numpy_NpyIter_IterNextFunc)(NpyIter *);

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1097
 * # Iterator API added in v1.6
 * ctypedef int (*NpyIter_IterNextFunc)(NpyIter* it) noexcept nogil
 * ctypedef void (*NpyIter_GetMultiIndexFunc)(NpyIter* it, npy_intp* outcoords) noexcept nogil             # <<<<<<<<<<<<<<
 * 
 * cdef extern from "numpy/arrayobject.h":
 */
typedef void (*__pyx_t_5numpy_NpyIter_GetMultiIndexFunc)(NpyIter *, npy_intp *);

/* "dysgu/map_set_utils.pxd":16
 * 
 * 
 * ctypedef enum ReadEnum_t:             # <<<<<<<<<<<<<<
 *     DISCORDANT = 0
 *     SPLIT = 1
 */
enum __pyx_t_5dysgu_13map_set_utils_ReadEnum_t {
  __pyx_e_5dysgu_13map_set_utils_DISCORDANT = 0,
  __pyx_e_5dysgu_13map_set_utils_SPLIT = 1,
  __pyx_e_5dysgu_13map_set_utils_DELETION = 2,
  __pyx_e_5dysgu_13map_set_utils_INSERTION = 3,
  __pyx_e_5dysgu_13map_set_utils_BREAKEND = 4
};
typedef enum __pyx_t_5dysgu_13map_set_utils_ReadEnum_t __pyx_t_5dysgu_13map_set_utils_ReadEnum_t;

/* "dysgu/map_set_utils.pxd":12
 * from libc.stdint cimport uint64_t, int32_t, int8_t
 * 
 * ctypedef cpp_vector[int] int_vec_t             # <<<<<<<<<<<<<<
 * ctypedef cpp_pair[int, int] get_val_result
 * 
 */
typedef std::vector<int>  __pyx_t_5dysgu_13map_set_utils_int_vec_t;

/* "dysgu/map_set_utils.pxd":13
 * 
 * ctypedef cpp_vector[int] int_vec_t
 * ctypedef cpp_pair[int, int] get_val_result             # <<<<<<<<<<<<<<
 * 
 * 
 */
typedef std::pair<int,int>  __pyx_t_5dysgu_13map_set_utils_get_val_result;

/* "dysgu/map_set_utils.pxd":99
 * 
 * 
 * cdef class Py_BasicIntervalTree:             # <<<<<<<<<<<<<<
 *     cdef BasicIntervalTree *thisptr
 * 
 */
struct __pyx_obj_5dysgu_13map_set_utils_Py_BasicIntervalTree {
  PyObject_HEAD
  struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_BasicIntervalTree *__pyx_vtab;
  BasicIntervalTree *thisptr;
};


/* "dysgu/map_set_utils.pxd":125
 * 
 * 
 * cdef class Py_DiGraph:             # <<<<<<<<<<<<<<
 *     """DiGraph, no weight"""
 *     cdef DiGraph *thisptr
 */
struct __pyx_obj_5dysgu_13map_set_utils_Py_DiGraph {
  PyObject_HEAD
  struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_DiGraph *__pyx_vtab;
  DiGraph *thisptr;
};


/* "dysgu/map_set_utils.pxd":170
 * 
 * 
 * cdef class Py_SimpleGraph:             # <<<<<<<<<<<<<<
 *     """Graph"""
 *     cdef SimpleGraph *thisptr
 */
struct __pyx_obj_5dysgu_13map_set_utils_Py_SimpleGraph {
  PyObject_HEAD
  struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_SimpleGraph *__pyx_vtab;
  SimpleGraph *thisptr;
};


/* "dysgu/map_set_utils.pxd":196
 * 
 * 
 * cdef class Py_Int2IntMap:             # <<<<<<<<<<<<<<
 *     """Fast integer to integer unordered map using tsl::robin-map"""
 *     cdef Int2IntMap *thisptr
 */
struct __pyx_obj_5dysgu_13map_set_utils_Py_Int2IntMap {
  PyObject_HEAD
  struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_Int2IntMap *__pyx_vtab;
  Int2IntMap *thisptr;
};


/* "dysgu/map_set_utils.pxd":218
 * 
 * 
 * cdef class Py_IntSet:             # <<<<<<<<<<<<<<
 *     """Fast 32 bit int set using tsl::robin-set"""
 *     cdef IntSet *thisptr
 */
struct __pyx_obj_5dysgu_13map_set_utils_Py_IntSet {
  PyObject_HEAD
  struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_IntSet *__pyx_vtab;
  IntSet *thisptr;
};


/* "dysgu/map_set_utils.pxd":311
 * cdef float position_distance(int x1, int x2, int y1, int y2) nogil
 * 
 * cdef class EventResult:             # <<<<<<<<<<<<<<
 *     """Data holder for classifying alignments into SV types"""
 *     cdef public int32_t contig_ref_start, contig_ref_end, contig2_ref_start, contig2_ref_end, contig_lc, contig_rc, contig2_lc, contig2_rc, \
 */
struct __pyx_obj_5dysgu_13map_set_utils_EventResult {
  PyObject_HEAD
  int32_t contig_ref_start;
  int32_t contig_ref_end;
  int32_t contig2_ref_start;
  int32_t contig2_ref_end;
  int32_t contig_lc;
  int32_t contig_rc;
  int32_t contig2_lc;
  int32_t contig2_rc;
  int32_t grp_id;
  int32_t event_id;
  int32_t n_expansion;
  int32_t stride;
  int32_t ref_poly_bases;
  __pyx_t_5numpy_float32_t contig_left_weight;
  __pyx_t_5numpy_float32_t contig_right_weight;
  __pyx_t_5numpy_float32_t contig2_left_weight;
  __pyx_t_5numpy_float32_t contig2_right_weight;
  __pyx_t_5numpy_float32_t ref_rep;
  __pyx_t_5numpy_float32_t compress;
  int32_t su;
  int32_t pe;
  int32_t supp;
  int32_t sc;
  int32_t NP;
  int32_t maxASsupp;
  int32_t plus;
  int32_t minus;
  int32_t spanning;
  int32_t double_clips;
  int32_t n_unmapped_mates;
  int32_t n_small_tlen;
  int32_t bnd;
  int32_t ras;
  int32_t fas;
  int32_t cipos95A;
  int32_t cipos95B;
  __pyx_t_5numpy_float32_t NMpri;
  __pyx_t_5numpy_float32_t NMsupp;
  __pyx_t_5numpy_float32_t MAPQpri;
  __pyx_t_5numpy_float32_t MAPQsupp;
  __pyx_t_5numpy_float32_t NMbase;
  __pyx_t_5numpy_float32_t n_sa;
  __pyx_t_5numpy_float32_t n_xa;
  __pyx_t_5numpy_float32_t n_gaps;
  int32_t posA;
  int32_t posB;
  int32_t svlen;
  int32_t query_gap;
  int32_t query_overlap;
  int32_t block_edge;
  int32_t ref_bases;
  int32_t remap_score;
  int32_t bad_clip_count;
  int32_t remap_ed;
  int32_t n_in_grp;
  __pyx_t_5numpy_float32_t jitter;
  __pyx_t_5numpy_float32_t sqc;
  __pyx_t_5numpy_float32_t scw;
  __pyx_t_5numpy_float32_t clip_qual_ratio;
  __pyx_t_5numpy_float32_t outer_cn;
  __pyx_t_5numpy_float32_t inner_cn;
  __pyx_t_5numpy_float32_t fcc;
  __pyx_t_5numpy_float32_t rep;
  __pyx_t_5numpy_float32_t rep_sc;
  __pyx_t_5numpy_float32_t gc;
  __pyx_t_5numpy_float32_t neigh;
  __pyx_t_5numpy_float32_t neigh10kb;
  __pyx_t_5numpy_float32_t raw_reads_10kb;
  __pyx_t_5numpy_float32_t mcov;
  __pyx_t_5numpy_float32_t strand_binom_t;
  int preciseA;
  int preciseB;
  int linked;
  int modified;
  int remapped;
  int8_t svlen_precise;
  PyObject *contig;
  PyObject *contig2;
  PyObject *svtype;
  PyObject *join_type;
  PyObject *chrA;
  PyObject *chrB;
  PyObject *exp_seq;
  PyObject *sample;
  PyObject *type;
  PyObject *partners;
  PyObject *GQ;
  PyObject *GT;
  PyObject *kind;
  PyObject *ref_seq;
  PyObject *variant_seq;
  PyObject *left_ins_seq;
  PyObject *right_ins_seq;
  PyObject *site_info;
};


/* "dysgu/sv_category.pxd":3
 * #cython: language_level=3
 * 
 * cdef class AlignmentItem:             # <<<<<<<<<<<<<<
 *     """Data holder for classifying alignments into SV types"""
 *     cdef public int chrA, chrB, priA, priB, rA, rB, posA, endA, posB, endB, strandA, strandB, left_clipA, right_clipA,\
 */
struct __pyx_obj_5dysgu_11sv_category_AlignmentItem {
  PyObject_HEAD
  int chrA;
  int chrB;
  int priA;
  int priB;
  int rA;
  int rB;
  int posA;
  int endA;
  int posB;
  int endB;
  int strandA;
  int strandB;
  int left_clipA;
  int right_clipA;
  int left_clipB;
  int right_clipB;
  int breakA_precise;
  int breakB_precise;
  int breakA;
  int breakB;
  int a_qstart;
  int a_qend;
  int b_qstart;
  int b_qend;
  int a_len;
  int b_len;
  int query_gap;
  int read_overlaps_mate;
  int size_inferred;
  int query_overlap;
  int inferred_sv_len;
  PyObject *svtype;
  PyObject *join_type;
  PyObject *read_a;
  PyObject *read_b;
  PyObject *a_node_info;
  PyObject *b_node_info;
};



/* "dysgu/map_set_utils.pxd":99
 * 
 * 
 * cdef class Py_BasicIntervalTree:             # <<<<<<<<<<<<<<
 *     cdef BasicIntervalTree *thisptr
 * 
 */

struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_BasicIntervalTree {
  void (*add)(struct __pyx_obj_5dysgu_13map_set_utils_Py_BasicIntervalTree *, int, int, int, int __pyx_skip_dispatch);
  int (*searchInterval)(struct __pyx_obj_5dysgu_13map_set_utils_Py_BasicIntervalTree *, int, int, int __pyx_skip_dispatch);
  PyObject *(*overlappingInterval)(struct __pyx_obj_5dysgu_13map_set_utils_Py_BasicIntervalTree *, int, int, int __pyx_skip_dispatch);
  void (*index)(struct __pyx_obj_5dysgu_13map_set_utils_Py_BasicIntervalTree *, int __pyx_skip_dispatch);
  PyObject *(*allOverlappingIntervals)(struct __pyx_obj_5dysgu_13map_set_utils_Py_BasicIntervalTree *, int, int, int __pyx_skip_dispatch);
  int (*countOverlappingIntervals)(struct __pyx_obj_5dysgu_13map_set_utils_Py_BasicIntervalTree *, int, int, int __pyx_skip_dispatch);
};
static struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_BasicIntervalTree *__pyx_vtabptr_5dysgu_13map_set_utils_Py_BasicIntervalTree;


/* "dysgu/map_set_utils.pxd":125
 * 
 * 
 * cdef class Py_DiGraph:             # <<<<<<<<<<<<<<
 *     """DiGraph, no weight"""
 *     cdef DiGraph *thisptr
 */

struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_DiGraph {
  int (*addNode)(struct __pyx_obj_5dysgu_13map_set_utils_Py_DiGraph *);
  int (*hasEdge)(struct __pyx_obj_5dysgu_13map_set_utils_Py_DiGraph *, int, int);
  void (*addEdge)(struct __pyx_obj_5dysgu_13map_set_utils_Py_DiGraph *, int, int, int);
  void (*updateEdge)(struct __pyx_obj_5dysgu_13map_set_utils_Py_DiGraph *, int, int, int);
  int (*numberOfNodes)(struct __pyx_obj_5dysgu_13map_set_utils_Py_DiGraph *);
  void (*forInEdgesOf)(struct __pyx_obj_5dysgu_13map_set_utils_Py_DiGraph *, int, std::vector<std::pair<int,int> >  &);
  void (*neighbors)(struct __pyx_obj_5dysgu_13map_set_utils_Py_DiGraph *, int, std::vector<int>  &);
  float (*node_path_quality)(struct __pyx_obj_5dysgu_13map_set_utils_Py_DiGraph *, int, int, int);
};
static struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_DiGraph *__pyx_vtabptr_5dysgu_13map_set_utils_Py_DiGraph;


/* "dysgu/map_set_utils.pxd":170
 * 
 * 
 * cdef class Py_SimpleGraph:             # <<<<<<<<<<<<<<
 *     """Graph"""
 *     cdef SimpleGraph *thisptr
 */

struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_SimpleGraph {
  int (*addNode)(struct __pyx_obj_5dysgu_13map_set_utils_Py_SimpleGraph *, int __pyx_skip_dispatch);
  int (*hasEdge)(struct __pyx_obj_5dysgu_13map_set_utils_Py_SimpleGraph *, int, int, int __pyx_skip_dispatch);
  void (*addEdge)(struct __pyx_obj_5dysgu_13map_set_utils_Py_SimpleGraph *, int, int, int, int __pyx_skip_dispatch);
  int (*edgeCount)(struct __pyx_obj_5dysgu_13map_set_utils_Py_SimpleGraph *, int __pyx_skip_dispatch);
  int (*weight)(struct __pyx_obj_5dysgu_13map_set_utils_Py_SimpleGraph *, int, int, int __pyx_skip_dispatch);
  void (*neighbors)(struct __pyx_obj_5dysgu_13map_set_utils_Py_SimpleGraph *, int, std::vector<int>  &);
  void (*removeNode)(struct __pyx_obj_5dysgu_13map_set_utils_Py_SimpleGraph *, int, int __pyx_skip_dispatch);
  void (*connectedComponents)(struct __pyx_obj_5dysgu_13map_set_utils_Py_SimpleGraph *, char *, int, std::vector<int>  &);
  int (*showSize)(struct __pyx_obj_5dysgu_13map_set_utils_Py_SimpleGraph *, int __pyx_skip_dispatch);
};
static struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_SimpleGraph *__pyx_vtabptr_5dysgu_13map_set_utils_Py_SimpleGraph;


/* "dysgu/map_set_utils.pxd":196
 * 
 * 
 * cdef class Py_Int2IntMap:             # <<<<<<<<<<<<<<
 *     """Fast integer to integer unordered map using tsl::robin-map"""
 *     cdef Int2IntMap *thisptr
 */

struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_Int2IntMap {
  void (*insert)(struct __pyx_obj_5dysgu_13map_set_utils_Py_Int2IntMap *, int, int);
  void (*erase)(struct __pyx_obj_5dysgu_13map_set_utils_Py_Int2IntMap *, int);
  int (*has_key)(struct __pyx_obj_5dysgu_13map_set_utils_Py_Int2IntMap *, int);
  int (*get)(struct __pyx_obj_5dysgu_13map_set_utils_Py_Int2IntMap *, int);
  __pyx_t_5dysgu_13map_set_utils_get_val_result (*get_value)(struct __pyx_obj_5dysgu_13map_set_utils_Py_Int2IntMap *, int);
  int (*size)(struct __pyx_obj_5dysgu_13map_set_utils_Py_Int2IntMap *);
};
static struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_Int2IntMap *__pyx_vtabptr_5dysgu_13map_set_utils_Py_Int2IntMap;


/* "dysgu/map_set_utils.pxd":218
 * 
 * 
 * cdef class Py_IntSet:             # <<<<<<<<<<<<<<
 *     """Fast 32 bit int set using tsl::robin-set"""
 *     cdef IntSet *thisptr
 */

struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_IntSet {
  void (*insert)(struct __pyx_obj_5dysgu_13map_set_utils_Py_IntSet *, int);
  void (*erase)(struct __pyx_obj_5dysgu_13map_set_utils_Py_IntSet *, int);
  int (*has_key)(struct __pyx_obj_5dysgu_13map_set_utils_Py_IntSet *, int);
  int (*size)(struct __pyx_obj_5dysgu_13map_set_utils_Py_IntSet *);
};
static struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_IntSet *__pyx_vtabptr_5dysgu_13map_set_utils_Py_IntSet;
/* #### Code section: utility_code_proto ### */

/* --- Runtime support code (head) --- */
/* Refnanny.proto */
#ifndef CYTHON_REFNANNY
  #define CYTHON_REFNANNY 0
#endif
#if CYTHON_REFNANNY
  typedef struct {
    void (*INCREF)(void*, PyObject*, Py_ssize_t);
    void (*DECREF)(void*, PyObject*, Py_ssize_t);
    void (*GOTREF)(void*, PyObject*, Py_ssize_t);
    void (*GIVEREF)(void*, PyObject*, Py_ssize_t);
    void* (*SetupContext)(const char*, Py_ssize_t, const char*);
    void (*FinishContext)(void**);
  } __Pyx_RefNannyAPIStruct;
  static __Pyx_RefNannyAPIStruct *__Pyx_RefNanny = NULL;
  static __Pyx_RefNannyAPIStruct *__Pyx_RefNannyImportAPI(const char *modname);
  #define __Pyx_RefNannyDeclarations void *__pyx_refnanny = NULL;
#ifdef WITH_THREAD
  #define __Pyx_RefNannySetupContext(name, acquire_gil)\
          if (acquire_gil) {\
              PyGILState_STATE __pyx_gilstate_save = PyGILState_Ensure();\
              __pyx_refnanny = __Pyx_RefNanny->SetupContext((name), (__LINE__), (__FILE__));\
              PyGILState_Release(__pyx_gilstate_save);\
          } else {\
              __pyx_refnanny = __Pyx_RefNanny->SetupContext((name), (__LINE__), (__FILE__));\
          }
  #define __Pyx_RefNannyFinishContextNogil() {\
              PyGILState_STATE __pyx_gilstate_save = PyGILState_Ensure();\
              __Pyx_RefNannyFinishContext();\
              PyGILState_Release(__pyx_gilstate_save);\
          }
#else
  #define __Pyx_RefNannySetupContext(name, acquire_gil)\
          __pyx_refnanny = __Pyx_RefNanny->SetupContext((name), (__LINE__), (__FILE__))
  #define __Pyx_RefNannyFinishContextNogil() __Pyx_RefNannyFinishContext()
#endif
  #define __Pyx_RefNannyFinishContextNogil() {\
              PyGILState_STATE __pyx_gilstate_save = PyGILState_Ensure();\
              __Pyx_RefNannyFinishContext();\
              PyGILState_Release(__pyx_gilstate_save);\
          }
  #define __Pyx_RefNannyFinishContext()\
          __Pyx_RefNanny->FinishContext(&__pyx_refnanny)
  #define __Pyx_INCREF(r)  __Pyx_RefNanny->INCREF(__pyx_refnanny, (PyObject *)(r), (__LINE__))
  #define __Pyx_DECREF(r)  __Pyx_RefNanny->DECREF(__pyx_refnanny, (PyObject *)(r), (__LINE__))
  #define __Pyx_GOTREF(r)  __Pyx_RefNanny->GOTREF(__pyx_refnanny, (PyObject *)(r), (__LINE__))
  #define __Pyx_GIVEREF(r) __Pyx_RefNanny->GIVEREF(__pyx_refnanny, (PyObject *)(r), (__LINE__))
  #define __Pyx_XINCREF(r)  do { if((r) == NULL); else {__Pyx_INCREF(r); }} while(0)
  #define __Pyx_XDECREF(r)  do { if((r) == NULL); else {__Pyx_DECREF(r); }} while(0)
  #define __Pyx_XGOTREF(r)  do { if((r) == NULL); else {__Pyx_GOTREF(r); }} while(0)
  #define __Pyx_XGIVEREF(r) do { if((r) == NULL); else {__Pyx_GIVEREF(r);}} while(0)
#else
  #define __Pyx_RefNannyDeclarations
  #define __Pyx_RefNannySetupContext(name, acquire_gil)
  #define __Pyx_RefNannyFinishContextNogil()
  #define __Pyx_RefNannyFinishContext()
  #define __Pyx_INCREF(r) Py_INCREF(r)
  #define __Pyx_DECREF(r) Py_DECREF(r)
  #define __Pyx_GOTREF(r)
  #define __Pyx_GIVEREF(r)
  #define __Pyx_XINCREF(r) Py_XINCREF(r)
  #define __Pyx_XDECREF(r) Py_XDECREF(r)
  #define __Pyx_XGOTREF(r)
  #define __Pyx_XGIVEREF(r)
#endif
#define __Pyx_Py_XDECREF_SET(r, v) do {\
        PyObject *tmp = (PyObject *) r;\
        r = v; Py_XDECREF(tmp);\
    } while (0)
#define __Pyx_XDECREF_SET(r, v) do {\
        PyObject *tmp = (PyObject *) r;\
        r = v; __Pyx_XDECREF(tmp);\
    } while (0)
#define __Pyx_DECREF_SET(r, v) do {\
        PyObject *tmp = (PyObject *) r;\
        r = v; __Pyx_DECREF(tmp);\
    } while (0)
#define __Pyx_CLEAR(r)    do { PyObject* tmp = ((PyObject*)(r)); r = NULL; __Pyx_DECREF(tmp);} while(0)
#define __Pyx_XCLEAR(r)   do { if((r) != NULL) {PyObject* tmp = ((PyObject*)(r)); r = NULL; __Pyx_DECREF(tmp);}} while(0)

/* PyErrExceptionMatches.proto */
#if CYTHON_FAST_THREAD_STATE
#define __Pyx_PyErr_ExceptionMatches(err) __Pyx_PyErr_ExceptionMatchesInState(__pyx_tstate, err)
static CYTHON_INLINE int __Pyx_PyErr_ExceptionMatchesInState(PyThreadState* tstate, PyObject* err);
#else
#define __Pyx_PyErr_ExceptionMatches(err)  PyErr_ExceptionMatches(err)
#endif

/* PyThreadStateGet.proto */
#if CYTHON_FAST_THREAD_STATE
#define __Pyx_PyThreadState_declare  PyThreadState *__pyx_tstate;
#define __Pyx_PyThreadState_assign  __pyx_tstate = __Pyx_PyThreadState_Current;
#if PY_VERSION_HEX >= 0x030C00A6
#define __Pyx_PyErr_Occurred()  (__pyx_tstate->current_exception != NULL)
#define __Pyx_PyErr_CurrentExceptionType()  (__pyx_tstate->current_exception ? (PyObject*) Py_TYPE(__pyx_tstate->current_exception) : (PyObject*) NULL)
#else
#define __Pyx_PyErr_Occurred()  (__pyx_tstate->curexc_type != NULL)
#define __Pyx_PyErr_CurrentExceptionType()  (__pyx_tstate->curexc_type)
#endif
#else
#define __Pyx_PyThreadState_declare
#define __Pyx_PyThreadState_assign
#define __Pyx_PyErr_Occurred()  (PyErr_Occurred() != NULL)
#define __Pyx_PyErr_CurrentExceptionType()  PyErr_Occurred()
#endif

/* PyErrFetchRestore.proto */
#if CYTHON_FAST_THREAD_STATE
#define __Pyx_PyErr_Clear() __Pyx_ErrRestore(NULL, NULL, NULL)
#define __Pyx_ErrRestoreWithState(type, value, tb)  __Pyx_ErrRestoreInState(PyThreadState_GET(), type, value, tb)
#define __Pyx_ErrFetchWithState(type, value, tb)    __Pyx_ErrFetchInState(PyThreadState_GET(), type, value, tb)
#define __Pyx_ErrRestore(type, value, tb)  __Pyx_ErrRestoreInState(__pyx_tstate, type, value, tb)
#define __Pyx_ErrFetch(type, value, tb)    __Pyx_ErrFetchInState(__pyx_tstate, type, value, tb)
static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb);
static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb);
#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX < 0x030C00A6
#define __Pyx_PyErr_SetNone(exc) (Py_INCREF(exc), __Pyx_ErrRestore((exc), NULL, NULL))
#else
#define __Pyx_PyErr_SetNone(exc) PyErr_SetNone(exc)
#endif
#else
#define __Pyx_PyErr_Clear() PyErr_Clear()
#define __Pyx_PyErr_SetNone(exc) PyErr_SetNone(exc)
#define __Pyx_ErrRestoreWithState(type, value, tb)  PyErr_Restore(type, value, tb)
#define __Pyx_ErrFetchWithState(type, value, tb)  PyErr_Fetch(type, value, tb)
#define __Pyx_ErrRestoreInState(tstate, type, value, tb)  PyErr_Restore(type, value, tb)
#define __Pyx_ErrFetchInState(tstate, type, value, tb)  PyErr_Fetch(type, value, tb)
#define __Pyx_ErrRestore(type, value, tb)  PyErr_Restore(type, value, tb)
#define __Pyx_ErrFetch(type, value, tb)  PyErr_Fetch(type, value, tb)
#endif

/* PyObjectGetAttrStr.proto */
#if CYTHON_USE_TYPE_SLOTS
static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject* attr_name);
#else
#define __Pyx_PyObject_GetAttrStr(o,n) PyObject_GetAttr(o,n)
#endif

/* PyObjectGetAttrStrNoError.proto */
static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStrNoError(PyObject* obj, PyObject* attr_name);

/* GetBuiltinName.proto */
static PyObject *__Pyx_GetBuiltinName(PyObject *name);

/* GetTopmostException.proto */
#if CYTHON_USE_EXC_INFO_STACK && CYTHON_FAST_THREAD_STATE
static _PyErr_StackItem * __Pyx_PyErr_GetTopmostException(PyThreadState *tstate);
#endif

/* SaveResetException.proto */
#if CYTHON_FAST_THREAD_STATE
#define __Pyx_ExceptionSave(type, value, tb)  __Pyx__ExceptionSave(__pyx_tstate, type, value, tb)
static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb);
#define __Pyx_ExceptionReset(type, value, tb)  __Pyx__ExceptionReset(__pyx_tstate, type, value, tb)
static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb);
#else
#define __Pyx_ExceptionSave(type, value, tb)   PyErr_GetExcInfo(type, value, tb)
#define __Pyx_ExceptionReset(type, value, tb)  PyErr_SetExcInfo(type, value, tb)
#endif

/* GetException.proto */
#if CYTHON_FAST_THREAD_STATE
#define __Pyx_GetException(type, value, tb)  __Pyx__GetException(__pyx_tstate, type, value, tb)
static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb);
#else
static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb);
#endif

/* PyObjectCall.proto */
#if CYTHON_COMPILING_IN_CPYTHON
static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw);
#else
#define __Pyx_PyObject_Call(func, arg, kw) PyObject_Call(func, arg, kw)
#endif

/* RaiseException.proto */
static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause);

/* TupleAndListFromArray.proto */
#if CYTHON_COMPILING_IN_CPYTHON
static CYTHON_INLINE PyObject* __Pyx_PyList_FromArray(PyObject *const *src, Py_ssize_t n);
static CYTHON_INLINE PyObject* __Pyx_PyTuple_FromArray(PyObject *const *src, Py_ssize_t n);
#endif

/* IncludeStringH.proto */
#include <string.h>

/* BytesEquals.proto */
static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int equals);

/* UnicodeEquals.proto */
static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals);

/* fastcall.proto */
#if CYTHON_AVOID_BORROWED_REFS
    #define __Pyx_Arg_VARARGS(args, i) PySequence_GetItem(args, i)
#elif CYTHON_ASSUME_SAFE_MACROS
    #define __Pyx_Arg_VARARGS(args, i) PyTuple_GET_ITEM(args, i)
#else
    #define __Pyx_Arg_VARARGS(args, i) PyTuple_GetItem(args, i)
#endif
#if CYTHON_AVOID_BORROWED_REFS
    #define __Pyx_Arg_NewRef_VARARGS(arg) __Pyx_NewRef(arg)
    #define __Pyx_Arg_XDECREF_VARARGS(arg) Py_XDECREF(arg)
#else
    #define __Pyx_Arg_NewRef_VARARGS(arg) arg
    #define __Pyx_Arg_XDECREF_VARARGS(arg)
#endif
#define __Pyx_NumKwargs_VARARGS(kwds) PyDict_Size(kwds)
#define __Pyx_KwValues_VARARGS(args, nargs) NULL
#define __Pyx_GetKwValue_VARARGS(kw, kwvalues, s) __Pyx_PyDict_GetItemStrWithError(kw, s)
#define __Pyx_KwargsAsDict_VARARGS(kw, kwvalues) PyDict_Copy(kw)
#if CYTHON_METH_FASTCALL
    #define __Pyx_Arg_FASTCALL(args, i) args[i]
    #define __Pyx_NumKwargs_FASTCALL(kwds) PyTuple_GET_SIZE(kwds)
    #define __Pyx_KwValues_FASTCALL(args, nargs) ((args) + (nargs))
    static CYTHON_INLINE PyObject * __Pyx_GetKwValue_FASTCALL(PyObject *kwnames, PyObject *const *kwvalues, PyObject *s);
#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030d0000
    CYTHON_UNUSED static PyObject *__Pyx_KwargsAsDict_FASTCALL(PyObject *kwnames, PyObject *const *kwvalues);
  #else
    #define __Pyx_KwargsAsDict_FASTCALL(kw, kwvalues) _PyStack_AsDict(kwvalues, kw)
  #endif
    #define __Pyx_Arg_NewRef_FASTCALL(arg) arg  /* no-op, __Pyx_Arg_FASTCALL is direct and this needs
                                                   to have the same reference counting */
    #define __Pyx_Arg_XDECREF_FASTCALL(arg)
#else
    #define __Pyx_Arg_FASTCALL __Pyx_Arg_VARARGS
    #define __Pyx_NumKwargs_FASTCALL __Pyx_NumKwargs_VARARGS
    #define __Pyx_KwValues_FASTCALL __Pyx_KwValues_VARARGS
    #define __Pyx_GetKwValue_FASTCALL __Pyx_GetKwValue_VARARGS
    #define __Pyx_KwargsAsDict_FASTCALL __Pyx_KwargsAsDict_VARARGS
    #define __Pyx_Arg_NewRef_FASTCALL(arg) __Pyx_Arg_NewRef_VARARGS(arg)
    #define __Pyx_Arg_XDECREF_FASTCALL(arg) __Pyx_Arg_XDECREF_VARARGS(arg)
#endif
#if CYTHON_COMPILING_IN_CPYTHON && CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS
#define __Pyx_ArgsSlice_VARARGS(args, start, stop) __Pyx_PyTuple_FromArray(&__Pyx_Arg_VARARGS(args, start), stop - start)
#define __Pyx_ArgsSlice_FASTCALL(args, start, stop) __Pyx_PyTuple_FromArray(&__Pyx_Arg_FASTCALL(args, start), stop - start)
#else
#define __Pyx_ArgsSlice_VARARGS(args, start, stop) PyTuple_GetSlice(args, start, stop)
#define __Pyx_ArgsSlice_FASTCALL(args, start, stop) PyTuple_GetSlice(args, start, stop)
#endif

/* RaiseArgTupleInvalid.proto */
static void __Pyx_RaiseArgtupleInvalid(const char* func_name, int exact,
    Py_ssize_t num_min, Py_ssize_t num_max, Py_ssize_t num_found);

/* RaiseDoubleKeywords.proto */
static void __Pyx_RaiseDoubleKeywordsError(const char* func_name, PyObject* kw_name);

/* ParseKeywords.proto */
static int __Pyx_ParseOptionalKeywords(PyObject *kwds, PyObject *const *kwvalues,
    PyObject **argnames[],
    PyObject *kwds2, PyObject *values[], Py_ssize_t num_pos_args,
    const char* function_name);

/* RaiseUnexpectedTypeError.proto */
static int __Pyx_RaiseUnexpectedTypeError(const char *expected, PyObject *obj);

/* KeywordStringCheck.proto */
static int __Pyx_CheckKeywordStrings(PyObject *kw, const char* function_name, int kw_allowed);

/* GCCDiagnostics.proto */
#if !defined(__INTEL_COMPILER) && defined(__GNUC__) && (__GNUC__ > 4 || (__GNUC__ == 4 && __GNUC_MINOR__ >= 6))
#define __Pyx_HAS_GCC_DIAGNOSTIC
#endif

/* BuildPyUnicode.proto */
static PyObject* __Pyx_PyUnicode_BuildFromAscii(Py_ssize_t ulength, char* chars, int clength,
                                                int prepend_sign, char padding_char);

/* CIntToPyUnicode.proto */
static CYTHON_INLINE PyObject* __Pyx_PyUnicode_From_int(int value, Py_ssize_t width, char padding_char, char format_char);

/* JoinPyUnicode.proto */
static PyObject* __Pyx_PyUnicode_Join(PyObject* value_tuple, Py_ssize_t value_count, Py_ssize_t result_ulength,
                                      Py_UCS4 max_char);

/* IncludeStructmemberH.proto */
#include <structmember.h>

/* FixUpExtensionType.proto */
#if CYTHON_USE_TYPE_SPECS
static int __Pyx_fix_up_extension_type_from_spec(PyType_Spec *spec, PyTypeObject *type);
#endif

/* PyFunctionFastCall.proto */
#if CYTHON_FAST_PYCALL
#if !CYTHON_VECTORCALL
#define __Pyx_PyFunction_FastCall(func, args, nargs)\
    __Pyx_PyFunction_FastCallDict((func), (args), (nargs), NULL)
static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, Py_ssize_t nargs, PyObject *kwargs);
#endif
#define __Pyx_BUILD_ASSERT_EXPR(cond)\
    (sizeof(char [1 - 2*!(cond)]) - 1)
#ifndef Py_MEMBER_SIZE
#define Py_MEMBER_SIZE(type, member) sizeof(((type *)0)->member)
#endif
#if !CYTHON_VECTORCALL
#if PY_VERSION_HEX >= 0x03080000
  #include "frameobject.h"
#if PY_VERSION_HEX >= 0x030b00a6 && !CYTHON_COMPILING_IN_LIMITED_API
  #ifndef Py_BUILD_CORE
    #define Py_BUILD_CORE 1
  #endif
  #include "internal/pycore_frame.h"
#endif
  #define __Pxy_PyFrame_Initialize_Offsets()
  #define __Pyx_PyFrame_GetLocalsplus(frame)  ((frame)->f_localsplus)
#else
  static size_t __pyx_pyframe_localsplus_offset = 0;
  #include "frameobject.h"
  #define __Pxy_PyFrame_Initialize_Offsets()\
    ((void)__Pyx_BUILD_ASSERT_EXPR(sizeof(PyFrameObject) == offsetof(PyFrameObject, f_localsplus) + Py_MEMBER_SIZE(PyFrameObject, f_localsplus)),\
     (void)(__pyx_pyframe_localsplus_offset = ((size_t)PyFrame_Type.tp_basicsize) - Py_MEMBER_SIZE(PyFrameObject, f_localsplus)))
  #define __Pyx_PyFrame_GetLocalsplus(frame)\
    (assert(__pyx_pyframe_localsplus_offset), (PyObject **)(((char *)(frame)) + __pyx_pyframe_localsplus_offset))
#endif
#endif
#endif

/* PyObjectCallMethO.proto */
#if CYTHON_COMPILING_IN_CPYTHON
static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg);
#endif

/* PyObjectFastCall.proto */
#define __Pyx_PyObject_FastCall(func, args, nargs)  __Pyx_PyObject_FastCallDict(func, args, (size_t)(nargs), NULL)
static CYTHON_INLINE PyObject* __Pyx_PyObject_FastCallDict(PyObject *func, PyObject **args, size_t nargs, PyObject *kwargs);

/* PyObjectCallNoArg.proto */
static CYTHON_INLINE PyObject* __Pyx_PyObject_CallNoArg(PyObject *func);

/* PyObjectCallOneArg.proto */
static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg);

/* PyObjectGetMethod.proto */
static int __Pyx_PyObject_GetMethod(PyObject *obj, PyObject *name, PyObject **method);

/* PyObjectCallMethod0.proto */
static PyObject* __Pyx_PyObject_CallMethod0(PyObject* obj, PyObject* method_name);

/* ValidateBasesTuple.proto */
#if CYTHON_COMPILING_IN_CPYTHON || CYTHON_COMPILING_IN_LIMITED_API || CYTHON_USE_TYPE_SPECS
static int __Pyx_validate_bases_tuple(const char *type_name, Py_ssize_t dictoffset, PyObject *bases);
#endif

/* PyType_Ready.proto */
CYTHON_UNUSED static int __Pyx_PyType_Ready(PyTypeObject *t);

/* PyObject_GenericGetAttrNoDict.proto */
#if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000
static CYTHON_INLINE PyObject* __Pyx_PyObject_GenericGetAttrNoDict(PyObject* obj, PyObject* attr_name);
#else
#define __Pyx_PyObject_GenericGetAttrNoDict PyObject_GenericGetAttr
#endif

/* PyObject_GenericGetAttr.proto */
#if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000
static PyObject* __Pyx_PyObject_GenericGetAttr(PyObject* obj, PyObject* attr_name);
#else
#define __Pyx_PyObject_GenericGetAttr PyObject_GenericGetAttr
#endif

/* SetupReduce.proto */
#if !CYTHON_COMPILING_IN_LIMITED_API
static int __Pyx_setup_reduce(PyObject* type_obj);
#endif

/* TypeImport.proto */
#ifndef __PYX_HAVE_RT_ImportType_proto_3_0_10
#define __PYX_HAVE_RT_ImportType_proto_3_0_10
#if defined (__STDC_VERSION__) && __STDC_VERSION__ >= 201112L
#include <stdalign.h>
#endif
#if (defined (__STDC_VERSION__) && __STDC_VERSION__ >= 201112L) || __cplusplus >= 201103L
#define __PYX_GET_STRUCT_ALIGNMENT_3_0_10(s) alignof(s)
#else
#define __PYX_GET_STRUCT_ALIGNMENT_3_0_10(s) sizeof(void*)
#endif
enum __Pyx_ImportType_CheckSize_3_0_10 {
   __Pyx_ImportType_CheckSize_Error_3_0_10 = 0,
   __Pyx_ImportType_CheckSize_Warn_3_0_10 = 1,
   __Pyx_ImportType_CheckSize_Ignore_3_0_10 = 2
};
static PyTypeObject *__Pyx_ImportType_3_0_10(PyObject* module, const char *module_name, const char *class_name, size_t size, size_t alignment, enum __Pyx_ImportType_CheckSize_3_0_10 check_size);
#endif

/* GetVTable.proto */
static void* __Pyx_GetVtable(PyTypeObject *type);

/* Import.proto */
static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level);

/* ImportFrom.proto */
static PyObject* __Pyx_ImportFrom(PyObject* module, PyObject* name);

/* FetchSharedCythonModule.proto */
static PyObject *__Pyx_FetchSharedCythonABIModule(void);

/* FetchCommonType.proto */
#if !CYTHON_USE_TYPE_SPECS
static PyTypeObject* __Pyx_FetchCommonType(PyTypeObject* type);
#else
static PyTypeObject* __Pyx_FetchCommonTypeFromSpec(PyObject *module, PyType_Spec *spec, PyObject *bases);
#endif

/* PyMethodNew.proto */
#if CYTHON_COMPILING_IN_LIMITED_API
static PyObject *__Pyx_PyMethod_New(PyObject *func, PyObject *self, PyObject *typ) {
    PyObject *typesModule=NULL, *methodType=NULL, *result=NULL;
    CYTHON_UNUSED_VAR(typ);
    if (!self)
        return __Pyx_NewRef(func);
    typesModule = PyImport_ImportModule("types");
    if (!typesModule) return NULL;
    methodType = PyObject_GetAttrString(typesModule, "MethodType");
    Py_DECREF(typesModule);
    if (!methodType) return NULL;
    result = PyObject_CallFunctionObjArgs(methodType, func, self, NULL);
    Py_DECREF(methodType);
    return result;
}
#elif PY_MAJOR_VERSION >= 3
static PyObject *__Pyx_PyMethod_New(PyObject *func, PyObject *self, PyObject *typ) {
    CYTHON_UNUSED_VAR(typ);
    if (!self)
        return __Pyx_NewRef(func);
    return PyMethod_New(func, self);
}
#else
    #define __Pyx_PyMethod_New PyMethod_New
#endif

/* PyVectorcallFastCallDict.proto */
#if CYTHON_METH_FASTCALL
static CYTHON_INLINE PyObject *__Pyx_PyVectorcall_FastCallDict(PyObject *func, __pyx_vectorcallfunc vc, PyObject *const *args, size_t nargs, PyObject *kw);
#endif

/* CythonFunctionShared.proto */
#define __Pyx_CyFunction_USED
#define __Pyx_CYFUNCTION_STATICMETHOD  0x01
#define __Pyx_CYFUNCTION_CLASSMETHOD   0x02
#define __Pyx_CYFUNCTION_CCLASS        0x04
#define __Pyx_CYFUNCTION_COROUTINE     0x08
#define __Pyx_CyFunction_GetClosure(f)\
    (((__pyx_CyFunctionObject *) (f))->func_closure)
#if PY_VERSION_HEX < 0x030900B1 || CYTHON_COMPILING_IN_LIMITED_API
  #define __Pyx_CyFunction_GetClassObj(f)\
      (((__pyx_CyFunctionObject *) (f))->func_classobj)
#else
  #define __Pyx_CyFunction_GetClassObj(f)\
      ((PyObject*) ((PyCMethodObject *) (f))->mm_class)
#endif
#define __Pyx_CyFunction_SetClassObj(f, classobj)\
    __Pyx__CyFunction_SetClassObj((__pyx_CyFunctionObject *) (f), (classobj))
#define __Pyx_CyFunction_Defaults(type, f)\
    ((type *)(((__pyx_CyFunctionObject *) (f))->defaults))
#define __Pyx_CyFunction_SetDefaultsGetter(f, g)\
    ((__pyx_CyFunctionObject *) (f))->defaults_getter = (g)
typedef struct {
#if CYTHON_COMPILING_IN_LIMITED_API
    PyObject_HEAD
    PyObject *func;
#elif PY_VERSION_HEX < 0x030900B1
    PyCFunctionObject func;
#else
    PyCMethodObject func;
#endif
#if CYTHON_BACKPORT_VECTORCALL
    __pyx_vectorcallfunc func_vectorcall;
#endif
#if PY_VERSION_HEX < 0x030500A0 || CYTHON_COMPILING_IN_LIMITED_API
    PyObject *func_weakreflist;
#endif
    PyObject *func_dict;
    PyObject *func_name;
    PyObject *func_qualname;
    PyObject *func_doc;
    PyObject *func_globals;
    PyObject *func_code;
    PyObject *func_closure;
#if PY_VERSION_HEX < 0x030900B1 || CYTHON_COMPILING_IN_LIMITED_API
    PyObject *func_classobj;
#endif
    void *defaults;
    int defaults_pyobjects;
    size_t defaults_size;
    int flags;
    PyObject *defaults_tuple;
    PyObject *defaults_kwdict;
    PyObject *(*defaults_getter)(PyObject *);
    PyObject *func_annotations;
    PyObject *func_is_coroutine;
} __pyx_CyFunctionObject;
#undef __Pyx_CyOrPyCFunction_Check
#define __Pyx_CyFunction_Check(obj)  __Pyx_TypeCheck(obj, __pyx_CyFunctionType)
#define __Pyx_CyOrPyCFunction_Check(obj)  __Pyx_TypeCheck2(obj, __pyx_CyFunctionType, &PyCFunction_Type)
#define __Pyx_CyFunction_CheckExact(obj)  __Pyx_IS_TYPE(obj, __pyx_CyFunctionType)
static CYTHON_INLINE int __Pyx__IsSameCyOrCFunction(PyObject *func, void *cfunc);
#undef __Pyx_IsSameCFunction
#define __Pyx_IsSameCFunction(func, cfunc)   __Pyx__IsSameCyOrCFunction(func, cfunc)
static PyObject *__Pyx_CyFunction_Init(__pyx_CyFunctionObject* op, PyMethodDef *ml,
                                      int flags, PyObject* qualname,
                                      PyObject *closure,
                                      PyObject *module, PyObject *globals,
                                      PyObject* code);
static CYTHON_INLINE void __Pyx__CyFunction_SetClassObj(__pyx_CyFunctionObject* f, PyObject* classobj);
static CYTHON_INLINE void *__Pyx_CyFunction_InitDefaults(PyObject *m,
                                                         size_t size,
                                                         int pyobjects);
static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsTuple(PyObject *m,
                                                            PyObject *tuple);
static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsKwDict(PyObject *m,
                                                             PyObject *dict);
static CYTHON_INLINE void __Pyx_CyFunction_SetAnnotationsDict(PyObject *m,
                                                              PyObject *dict);
static int __pyx_CyFunction_init(PyObject *module);
#if CYTHON_METH_FASTCALL
static PyObject * __Pyx_CyFunction_Vectorcall_NOARGS(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames);
static PyObject * __Pyx_CyFunction_Vectorcall_O(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames);
static PyObject * __Pyx_CyFunction_Vectorcall_FASTCALL_KEYWORDS(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames);
static PyObject * __Pyx_CyFunction_Vectorcall_FASTCALL_KEYWORDS_METHOD(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames);
#if CYTHON_BACKPORT_VECTORCALL
#define __Pyx_CyFunction_func_vectorcall(f) (((__pyx_CyFunctionObject*)f)->func_vectorcall)
#else
#define __Pyx_CyFunction_func_vectorcall(f) (((PyCFunctionObject*)f)->vectorcall)
#endif
#endif

/* CythonFunction.proto */
static PyObject *__Pyx_CyFunction_New(PyMethodDef *ml,
                                      int flags, PyObject* qualname,
                                      PyObject *closure,
                                      PyObject *module, PyObject *globals,
                                      PyObject* code);

/* PyDictVersioning.proto */
#if CYTHON_USE_DICT_VERSIONS && CYTHON_USE_TYPE_SLOTS
#define __PYX_DICT_VERSION_INIT  ((PY_UINT64_T) -1)
#define __PYX_GET_DICT_VERSION(dict)  (((PyDictObject*)(dict))->ma_version_tag)
#define __PYX_UPDATE_DICT_CACHE(dict, value, cache_var, version_var)\
    (version_var) = __PYX_GET_DICT_VERSION(dict);\
    (cache_var) = (value);
#define __PYX_PY_DICT_LOOKUP_IF_MODIFIED(VAR, DICT, LOOKUP) {\
    static PY_UINT64_T __pyx_dict_version = 0;\
    static PyObject *__pyx_dict_cached_value = NULL;\
    if (likely(__PYX_GET_DICT_VERSION(DICT) == __pyx_dict_version)) {\
        (VAR) = __pyx_dict_cached_value;\
    } else {\
        (VAR) = __pyx_dict_cached_value = (LOOKUP);\
        __pyx_dict_version = __PYX_GET_DICT_VERSION(DICT);\
    }\
}
static CYTHON_INLINE PY_UINT64_T __Pyx_get_tp_dict_version(PyObject *obj);
static CYTHON_INLINE PY_UINT64_T __Pyx_get_object_dict_version(PyObject *obj);
static CYTHON_INLINE int __Pyx_object_dict_version_matches(PyObject* obj, PY_UINT64_T tp_dict_version, PY_UINT64_T obj_dict_version);
#else
#define __PYX_GET_DICT_VERSION(dict)  (0)
#define __PYX_UPDATE_DICT_CACHE(dict, value, cache_var, version_var)
#define __PYX_PY_DICT_LOOKUP_IF_MODIFIED(VAR, DICT, LOOKUP)  (VAR) = (LOOKUP);
#endif

/* CLineInTraceback.proto */
#ifdef CYTHON_CLINE_IN_TRACEBACK
#define __Pyx_CLineForTraceback(tstate, c_line)  (((CYTHON_CLINE_IN_TRACEBACK)) ? c_line : 0)
#else
static int __Pyx_CLineForTraceback(PyThreadState *tstate, int c_line);
#endif

/* CodeObjectCache.proto */
#if !CYTHON_COMPILING_IN_LIMITED_API
typedef struct {
    PyCodeObject* code_object;
    int code_line;
} __Pyx_CodeObjectCacheEntry;
struct __Pyx_CodeObjectCache {
    int count;
    int max_count;
    __Pyx_CodeObjectCacheEntry* entries;
};
static struct __Pyx_CodeObjectCache __pyx_code_cache = {0,0,NULL};
static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line);
static PyCodeObject *__pyx_find_code_object(int code_line);
static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object);
#endif

/* AddTraceback.proto */
static void __Pyx_AddTraceback(const char *funcname, int c_line,
                               int py_line, const char *filename);

/* RealImag.proto */
#if CYTHON_CCOMPLEX
  #ifdef __cplusplus
    #define __Pyx_CREAL(z) ((z).real())
    #define __Pyx_CIMAG(z) ((z).imag())
  #else
    #define __Pyx_CREAL(z) (__real__(z))
    #define __Pyx_CIMAG(z) (__imag__(z))
  #endif
#else
    #define __Pyx_CREAL(z) ((z).real)
    #define __Pyx_CIMAG(z) ((z).imag)
#endif
#if defined(__cplusplus) && CYTHON_CCOMPLEX\
        && (defined(_WIN32) || defined(__clang__) || (defined(__GNUC__) && (__GNUC__ >= 5 || __GNUC__ == 4 && __GNUC_MINOR__ >= 4 )) || __cplusplus >= 201103)
    #define __Pyx_SET_CREAL(z,x) ((z).real(x))
    #define __Pyx_SET_CIMAG(z,y) ((z).imag(y))
#else
    #define __Pyx_SET_CREAL(z,x) __Pyx_CREAL(z) = (x)
    #define __Pyx_SET_CIMAG(z,y) __Pyx_CIMAG(z) = (y)
#endif

/* Arithmetic.proto */
#if CYTHON_CCOMPLEX && (1) && (!0 || __cplusplus)
    #define __Pyx_c_eq_float(a, b)   ((a)==(b))
    #define __Pyx_c_sum_float(a, b)  ((a)+(b))
    #define __Pyx_c_diff_float(a, b) ((a)-(b))
    #define __Pyx_c_prod_float(a, b) ((a)*(b))
    #define __Pyx_c_quot_float(a, b) ((a)/(b))
    #define __Pyx_c_neg_float(a)     (-(a))
  #ifdef __cplusplus
    #define __Pyx_c_is_zero_float(z) ((z)==(float)0)
    #define __Pyx_c_conj_float(z)    (::std::conj(z))
    #if 1
        #define __Pyx_c_abs_float(z)     (::std::abs(z))
        #define __Pyx_c_pow_float(a, b)  (::std::pow(a, b))
    #endif
  #else
    #define __Pyx_c_is_zero_float(z) ((z)==0)
    #define __Pyx_c_conj_float(z)    (conjf(z))
    #if 1
        #define __Pyx_c_abs_float(z)     (cabsf(z))
        #define __Pyx_c_pow_float(a, b)  (cpowf(a, b))
    #endif
 #endif
#else
    static CYTHON_INLINE int __Pyx_c_eq_float(__pyx_t_float_complex, __pyx_t_float_complex);
    static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sum_float(__pyx_t_float_complex, __pyx_t_float_complex);
    static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_diff_float(__pyx_t_float_complex, __pyx_t_float_complex);
    static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prod_float(__pyx_t_float_complex, __pyx_t_float_complex);
    static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex, __pyx_t_float_complex);
    static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_neg_float(__pyx_t_float_complex);
    static CYTHON_INLINE int __Pyx_c_is_zero_float(__pyx_t_float_complex);
    static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conj_float(__pyx_t_float_complex);
    #if 1
        static CYTHON_INLINE float __Pyx_c_abs_float(__pyx_t_float_complex);
        static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_pow_float(__pyx_t_float_complex, __pyx_t_float_complex);
    #endif
#endif

/* Arithmetic.proto */
#if CYTHON_CCOMPLEX && (1) && (!0 || __cplusplus)
    #define __Pyx_c_eq_double(a, b)   ((a)==(b))
    #define __Pyx_c_sum_double(a, b)  ((a)+(b))
    #define __Pyx_c_diff_double(a, b) ((a)-(b))
    #define __Pyx_c_prod_double(a, b) ((a)*(b))
    #define __Pyx_c_quot_double(a, b) ((a)/(b))
    #define __Pyx_c_neg_double(a)     (-(a))
  #ifdef __cplusplus
    #define __Pyx_c_is_zero_double(z) ((z)==(double)0)
    #define __Pyx_c_conj_double(z)    (::std::conj(z))
    #if 1
        #define __Pyx_c_abs_double(z)     (::std::abs(z))
        #define __Pyx_c_pow_double(a, b)  (::std::pow(a, b))
    #endif
  #else
    #define __Pyx_c_is_zero_double(z) ((z)==0)
    #define __Pyx_c_conj_double(z)    (conj(z))
    #if 1
        #define __Pyx_c_abs_double(z)     (cabs(z))
        #define __Pyx_c_pow_double(a, b)  (cpow(a, b))
    #endif
 #endif
#else
    static CYTHON_INLINE int __Pyx_c_eq_double(__pyx_t_double_complex, __pyx_t_double_complex);
    static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum_double(__pyx_t_double_complex, __pyx_t_double_complex);
    static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff_double(__pyx_t_double_complex, __pyx_t_double_complex);
    static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod_double(__pyx_t_double_complex, __pyx_t_double_complex);
    static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex, __pyx_t_double_complex);
    static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg_double(__pyx_t_double_complex);
    static CYTHON_INLINE int __Pyx_c_is_zero_double(__pyx_t_double_complex);
    static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj_double(__pyx_t_double_complex);
    #if 1
        static CYTHON_INLINE double __Pyx_c_abs_double(__pyx_t_double_complex);
        static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow_double(__pyx_t_double_complex, __pyx_t_double_complex);
    #endif
#endif

/* Arithmetic.proto */
#if CYTHON_CCOMPLEX && (1) && (!0 || __cplusplus)
    #define __Pyx_c_eq_long__double(a, b)   ((a)==(b))
    #define __Pyx_c_sum_long__double(a, b)  ((a)+(b))
    #define __Pyx_c_diff_long__double(a, b) ((a)-(b))
    #define __Pyx_c_prod_long__double(a, b) ((a)*(b))
    #define __Pyx_c_quot_long__double(a, b) ((a)/(b))
    #define __Pyx_c_neg_long__double(a)     (-(a))
  #ifdef __cplusplus
    #define __Pyx_c_is_zero_long__double(z) ((z)==(long double)0)
    #define __Pyx_c_conj_long__double(z)    (::std::conj(z))
    #if 1
        #define __Pyx_c_abs_long__double(z)     (::std::abs(z))
        #define __Pyx_c_pow_long__double(a, b)  (::std::pow(a, b))
    #endif
  #else
    #define __Pyx_c_is_zero_long__double(z) ((z)==0)
    #define __Pyx_c_conj_long__double(z)    (conjl(z))
    #if 1
        #define __Pyx_c_abs_long__double(z)     (cabsl(z))
        #define __Pyx_c_pow_long__double(a, b)  (cpowl(a, b))
    #endif
 #endif
#else
    static CYTHON_INLINE int __Pyx_c_eq_long__double(__pyx_t_long_double_complex, __pyx_t_long_double_complex);
    static CYTHON_INLINE __pyx_t_long_double_complex __Pyx_c_sum_long__double(__pyx_t_long_double_complex, __pyx_t_long_double_complex);
    static CYTHON_INLINE __pyx_t_long_double_complex __Pyx_c_diff_long__double(__pyx_t_long_double_complex, __pyx_t_long_double_complex);
    static CYTHON_INLINE __pyx_t_long_double_complex __Pyx_c_prod_long__double(__pyx_t_long_double_complex, __pyx_t_long_double_complex);
    static CYTHON_INLINE __pyx_t_long_double_complex __Pyx_c_quot_long__double(__pyx_t_long_double_complex, __pyx_t_long_double_complex);
    static CYTHON_INLINE __pyx_t_long_double_complex __Pyx_c_neg_long__double(__pyx_t_long_double_complex);
    static CYTHON_INLINE int __Pyx_c_is_zero_long__double(__pyx_t_long_double_complex);
    static CYTHON_INLINE __pyx_t_long_double_complex __Pyx_c_conj_long__double(__pyx_t_long_double_complex);
    #if 1
        static CYTHON_INLINE long double __Pyx_c_abs_long__double(__pyx_t_long_double_complex);
        static CYTHON_INLINE __pyx_t_long_double_complex __Pyx_c_pow_long__double(__pyx_t_long_double_complex, __pyx_t_long_double_complex);
    #endif
#endif

/* CIntFromPy.proto */
static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *);

/* CIntToPy.proto */
static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value);

/* FormatTypeName.proto */
#if CYTHON_COMPILING_IN_LIMITED_API
typedef PyObject *__Pyx_TypeName;
#define __Pyx_FMT_TYPENAME "%U"
static __Pyx_TypeName __Pyx_PyType_GetName(PyTypeObject* tp);
#define __Pyx_DECREF_TypeName(obj) Py_XDECREF(obj)
#else
typedef const char *__Pyx_TypeName;
#define __Pyx_FMT_TYPENAME "%.200s"
#define __Pyx_PyType_GetName(tp) ((tp)->tp_name)
#define __Pyx_DECREF_TypeName(obj)
#endif

/* CIntToPy.proto */
static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value);

/* CIntFromPy.proto */
static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *);

/* FastTypeChecks.proto */
#if CYTHON_COMPILING_IN_CPYTHON
#define __Pyx_TypeCheck(obj, type) __Pyx_IsSubtype(Py_TYPE(obj), (PyTypeObject *)type)
#define __Pyx_TypeCheck2(obj, type1, type2) __Pyx_IsAnySubtype2(Py_TYPE(obj), (PyTypeObject *)type1, (PyTypeObject *)type2)
static CYTHON_INLINE int __Pyx_IsSubtype(PyTypeObject *a, PyTypeObject *b);
static CYTHON_INLINE int __Pyx_IsAnySubtype2(PyTypeObject *cls, PyTypeObject *a, PyTypeObject *b);
static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches(PyObject *err, PyObject *type);
static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches2(PyObject *err, PyObject *type1, PyObject *type2);
#else
#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type)
#define __Pyx_TypeCheck2(obj, type1, type2) (PyObject_TypeCheck(obj, (PyTypeObject *)type1) || PyObject_TypeCheck(obj, (PyTypeObject *)type2))
#define __Pyx_PyErr_GivenExceptionMatches(err, type) PyErr_GivenExceptionMatches(err, type)
#define __Pyx_PyErr_GivenExceptionMatches2(err, type1, type2) (PyErr_GivenExceptionMatches(err, type1) || PyErr_GivenExceptionMatches(err, type2))
#endif
#define __Pyx_PyErr_ExceptionMatches2(err1, err2)  __Pyx_PyErr_GivenExceptionMatches2(__Pyx_PyErr_CurrentExceptionType(), err1, err2)
#define __Pyx_PyException_Check(obj) __Pyx_TypeCheck(obj, PyExc_Exception)

/* CheckBinaryVersion.proto */
static unsigned long __Pyx_get_runtime_version(void);
static int __Pyx_check_binary_version(unsigned long ct_version, unsigned long rt_version, int allow_newer);

/* FunctionExport.proto */
static int __Pyx_ExportFunction(const char *name, void (*f)(void), const char *sig);

/* FunctionImport.proto */
static int __Pyx_ImportFunction_3_0_10(PyObject *module, const char *funcname, void (**f)(void), const char *sig);

/* InitStrings.proto */
static int __Pyx_InitStrings(__Pyx_StringTabEntry *t);

/* #### Code section: module_declarations ### */
static CYTHON_INLINE npy_intp __pyx_f_5numpy_5dtype_8itemsize_itemsize(PyArray_Descr *__pyx_v_self); /* proto*/
static CYTHON_INLINE npy_intp __pyx_f_5numpy_5dtype_9alignment_alignment(PyArray_Descr *__pyx_v_self); /* proto*/
static CYTHON_INLINE PyObject *__pyx_f_5numpy_5dtype_6fields_fields(PyArray_Descr *__pyx_v_self); /* proto*/
static CYTHON_INLINE PyObject *__pyx_f_5numpy_5dtype_5names_names(PyArray_Descr *__pyx_v_self); /* proto*/
static CYTHON_INLINE PyArray_ArrayDescr *__pyx_f_5numpy_5dtype_8subarray_subarray(PyArray_Descr *__pyx_v_self); /* proto*/
static CYTHON_INLINE npy_uint64 __pyx_f_5numpy_5dtype_5flags_flags(PyArray_Descr *__pyx_v_self); /* proto*/
static CYTHON_INLINE int __pyx_f_5numpy_9broadcast_7numiter_numiter(PyArrayMultiIterObject *__pyx_v_self); /* proto*/
static CYTHON_INLINE npy_intp __pyx_f_5numpy_9broadcast_4size_size(PyArrayMultiIterObject *__pyx_v_self); /* proto*/
static CYTHON_INLINE npy_intp __pyx_f_5numpy_9broadcast_5index_index(PyArrayMultiIterObject *__pyx_v_self); /* proto*/
static CYTHON_INLINE int __pyx_f_5numpy_9broadcast_2nd_nd(PyArrayMultiIterObject *__pyx_v_self); /* proto*/
static CYTHON_INLINE npy_intp *__pyx_f_5numpy_9broadcast_10dimensions_dimensions(PyArrayMultiIterObject *__pyx_v_self); /* proto*/
static CYTHON_INLINE void **__pyx_f_5numpy_9broadcast_5iters_iters(PyArrayMultiIterObject *__pyx_v_self); /* proto*/
static CYTHON_INLINE PyObject *__pyx_f_5numpy_7ndarray_4base_base(PyArrayObject *__pyx_v_self); /* proto*/
static CYTHON_INLINE PyArray_Descr *__pyx_f_5numpy_7ndarray_5descr_descr(PyArrayObject *__pyx_v_self); /* proto*/
static CYTHON_INLINE int __pyx_f_5numpy_7ndarray_4ndim_ndim(PyArrayObject *__pyx_v_self); /* proto*/
static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_5shape_shape(PyArrayObject *__pyx_v_self); /* proto*/
static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_7strides_strides(PyArrayObject *__pyx_v_self); /* proto*/
static CYTHON_INLINE npy_intp __pyx_f_5numpy_7ndarray_4size_size(PyArrayObject *__pyx_v_self); /* proto*/
static CYTHON_INLINE char *__pyx_f_5numpy_7ndarray_4data_data(PyArrayObject *__pyx_v_self); /* proto*/

/* Module declarations from "libcpp.vector" */

/* Module declarations from "libcpp.utility" */

/* Module declarations from "libcpp.pair" */

/* Module declarations from "libc.string" */

/* Module declarations from "libc.stdio" */

/* Module declarations from "__builtin__" */

/* Module declarations from "cpython.type" */

/* Module declarations from "cpython" */

/* Module declarations from "cpython.object" */

/* Module declarations from "cpython.ref" */

/* Module declarations from "numpy" */

/* Module declarations from "numpy" */

/* Module declarations from "libc.stdint" */

/* Module declarations from "dysgu.map_set_utils" */
static int (*__pyx_f_5dysgu_13map_set_utils_is_overlapping)(int, int, int, int, int __pyx_skip_dispatch); /*proto*/

/* Module declarations from "dysgu.sv_category" */
static void __pyx_f_5dysgu_11sv_category_two_primary(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *); /*proto*/
static void __pyx_f_5dysgu_11sv_category_same_read(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *); /*proto*/
static void __pyx_f_5dysgu_11sv_category_different_read(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *); /*proto*/
static void __pyx_f_5dysgu_11sv_category_translocation(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *); /*proto*/
/* #### Code section: typeinfo ### */
/* #### Code section: before_global_var ### */
#define __Pyx_MODULE_NAME "dysgu.sv_category"
extern int __pyx_module_is_main_dysgu__sv_category;
int __pyx_module_is_main_dysgu__sv_category = 0;

/* Implementation of "dysgu.sv_category" */
/* #### Code section: global_var ### */
static PyObject *__pyx_builtin_TypeError;
static PyObject *__pyx_builtin_ImportError;
/* #### Code section: string_decls ### */
static const char __pyx_k__3[] = "";
static const char __pyx_k__4[] = ".";
static const char __pyx_k__9[] = "?";
static const char __pyx_k_gc[] = "gc";
static const char __pyx_k_rA[] = "rA";
static const char __pyx_k_rB[] = "rB";
static const char __pyx_k_to[] = "to";
static const char __pyx_k_BND[] = "BND";
static const char __pyx_k_DEL[] = "DEL";
static const char __pyx_k_DUP[] = "DUP";
static const char __pyx_k_INS[] = "INS";
static const char __pyx_k_INV[] = "INV";
static const char __pyx_k_TRA[] = "TRA";
static const char __pyx_k_3to3[] = "3to3";
static const char __pyx_k_3to5[] = "3to5";
static const char __pyx_k_5to3[] = "5to3";
static const char __pyx_k_5to5[] = "5to5";
static const char __pyx_k_chrA[] = "chrA";
static const char __pyx_k_chrB[] = "chrB";
static const char __pyx_k_echo[] = "echo";
static const char __pyx_k_endA[] = "endA";
static const char __pyx_k_endB[] = "endB";
static const char __pyx_k_main[] = "__main__";
static const char __pyx_k_name[] = "__name__";
static const char __pyx_k_posA[] = "posA";
static const char __pyx_k_posB[] = "posB";
static const char __pyx_k_priA[] = "priA";
static const char __pyx_k_priB[] = "priB";
static const char __pyx_k_self[] = "self";
static const char __pyx_k_test[] = "__test__";
static const char __pyx_k_a_len[] = "a_len";
static const char __pyx_k_b_len[] = "b_len";
static const char __pyx_k_a_qend[] = "a_qend";
static const char __pyx_k_b_qend[] = "b_qend";
static const char __pyx_k_enable[] = "enable";
static const char __pyx_k_import[] = "__import__";
static const char __pyx_k_read_a[] = "read_a";
static const char __pyx_k_read_b[] = "read_b";
static const char __pyx_k_reduce[] = "__reduce__";
static const char __pyx_k_disable[] = "disable";
static const char __pyx_k_strandA[] = "strandA";
static const char __pyx_k_strandB[] = "strandB";
static const char __pyx_k_a_qstart[] = "a_qstart";
static const char __pyx_k_b_qstart[] = "b_qstart";
static const char __pyx_k_getstate[] = "__getstate__";
static const char __pyx_k_setstate[] = "__setstate__";
static const char __pyx_k_TypeError[] = "TypeError";
static const char __pyx_k_isenabled[] = "isenabled";
static const char __pyx_k_pyx_state[] = "__pyx_state";
static const char __pyx_k_reduce_ex[] = "__reduce_ex__";
static const char __pyx_k_left_clipA[] = "left_clipA";
static const char __pyx_k_left_clipB[] = "left_clipB";
static const char __pyx_k_pyx_vtable[] = "__pyx_vtable__";
static const char __pyx_k_ImportError[] = "ImportError";
static const char __pyx_k_a_node_info[] = "a_node_info";
static const char __pyx_k_b_node_info[] = "b_node_info";
static const char __pyx_k_right_clipA[] = "right_clipA";
static const char __pyx_k_right_clipB[] = "right_clipB";
static const char __pyx_k_is_coroutine[] = "_is_coroutine";
static const char __pyx_k_stringsource[] = "<stringsource>";
static const char __pyx_k_AlignmentItem[] = "AlignmentItem";
static const char __pyx_k_reduce_cython[] = "__reduce_cython__";
static const char __pyx_k_setstate_cython[] = "__setstate_cython__";
static const char __pyx_k_dysgu_sv_category[] = "dysgu.sv_category";
static const char __pyx_k_asyncio_coroutines[] = "asyncio.coroutines";
static const char __pyx_k_cline_in_traceback[] = "cline_in_traceback";
static const char __pyx_k_read_overlaps_mate[] = "read_overlaps_mate";
static const char __pyx_k_dysgu_map_set_utils[] = "dysgu.map_set_utils";
static const char __pyx_k_AlignmentItem___reduce_cython[] = "AlignmentItem.__reduce_cython__";
static const char __pyx_k_AlignmentItem___setstate_cython[] = "AlignmentItem.__setstate_cython__";
static const char __pyx_k_no_default___reduce___due_to_non[] = "no default __reduce__ due to non-trivial __cinit__";
static const char __pyx_k_numpy__core_multiarray_failed_to[] = "numpy._core.multiarray failed to import";
static const char __pyx_k_numpy__core_umath_failed_to_impo[] = "numpy._core.umath failed to import";
/* #### Code section: decls ### */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem___cinit__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, int __pyx_v_chrA, int __pyx_v_chrB, int __pyx_v_priA, int __pyx_v_priB, int __pyx_v_rA, int __pyx_v_rB, int __pyx_v_posA, int __pyx_v_endA, int __pyx_v_posB, int __pyx_v_endB, int __pyx_v_strandA, int __pyx_v_strandB, int __pyx_v_left_clipA, int __pyx_v_right_clipA, int __pyx_v_left_clipB, int __pyx_v_right_clipB, int __pyx_v_a_qstart, int __pyx_v_a_qend, int __pyx_v_b_qstart, int __pyx_v_b_qend, int __pyx_v_a_len, int __pyx_v_b_len, int __pyx_v_read_overlaps_mate, PyObject *__pyx_v_read_a, PyObject *__pyx_v_read_b, PyObject *__pyx_v_a_node_info, PyObject *__pyx_v_b_node_info); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4chrA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4chrA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4chrB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4chrB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4priA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4priA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4priB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4priB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_2rA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_2rA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_2rB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_2rB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4posA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4posA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4endA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4endA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4posB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4posB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4endB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4endB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_7strandA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_7strandA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_7strandB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_7strandB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_10left_clipA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_10left_clipA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_11right_clipA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11right_clipA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_10left_clipB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_10left_clipB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_11right_clipB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11right_clipB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_14breakA_precise___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_14breakA_precise_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_14breakB_precise___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_14breakB_precise_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_6breakA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6breakA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_6breakB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6breakB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_8a_qstart___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_8a_qstart_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_6a_qend___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6a_qend_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_8b_qstart___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_8b_qstart_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_6b_qend___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6b_qend_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_5a_len___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_5a_len_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_5b_len___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_5b_len_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_9query_gap___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_9query_gap_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_18read_overlaps_mate___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_18read_overlaps_mate_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_13size_inferred___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_13size_inferred_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_13query_overlap___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_13query_overlap_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_15inferred_sv_len___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_15inferred_sv_len_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_6svtype___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6svtype_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6svtype_4__del__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_9join_type___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_9join_type_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_9join_type_4__del__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_a___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_a_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_a_4__del__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_b___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_b_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_b_4__del__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_11a_node_info___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11a_node_info_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11a_node_info_4__del__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_11b_node_info___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11b_node_info_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value); /* proto */
static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11b_node_info_4__del__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_2__reduce_cython__(CYTHON_UNUSED struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self); /* proto */
static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4__setstate_cython__(CYTHON_UNUSED struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v___pyx_state); /* proto */
static PyObject *__pyx_tp_new_5dysgu_11sv_category_AlignmentItem(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/
/* #### Code section: late_includes ### */
/* #### Code section: module_state ### */
typedef struct {
  PyObject *__pyx_d;
  PyObject *__pyx_b;
  PyObject *__pyx_cython_runtime;
  PyObject *__pyx_empty_tuple;
  PyObject *__pyx_empty_bytes;
  PyObject *__pyx_empty_unicode;
  #ifdef __Pyx_CyFunction_USED
  PyTypeObject *__pyx_CyFunctionType;
  #endif
  #ifdef __Pyx_FusedFunction_USED
  PyTypeObject *__pyx_FusedFunctionType;
  #endif
  #ifdef __Pyx_Generator_USED
  PyTypeObject *__pyx_GeneratorType;
  #endif
  #ifdef __Pyx_IterableCoroutine_USED
  PyTypeObject *__pyx_IterableCoroutineType;
  #endif
  #ifdef __Pyx_Coroutine_USED
  PyTypeObject *__pyx_CoroutineAwaitType;
  #endif
  #ifdef __Pyx_Coroutine_USED
  PyTypeObject *__pyx_CoroutineType;
  #endif
  #if CYTHON_USE_MODULE_STATE
  #endif
  #if CYTHON_USE_MODULE_STATE
  #endif
  #if CYTHON_USE_MODULE_STATE
  #endif
  #if CYTHON_USE_MODULE_STATE
  #endif
  #if CYTHON_USE_MODULE_STATE
  #endif
  #if CYTHON_USE_MODULE_STATE
  #endif
  #if CYTHON_USE_MODULE_STATE
  #endif
  PyTypeObject *__pyx_ptype_7cpython_4type_type;
  #if CYTHON_USE_MODULE_STATE
  #endif
  #if CYTHON_USE_MODULE_STATE
  #endif
  #if CYTHON_USE_MODULE_STATE
  #endif
  #if CYTHON_USE_MODULE_STATE
  #endif
  #if CYTHON_USE_MODULE_STATE
  #endif
  PyTypeObject *__pyx_ptype_5numpy_dtype;
  PyTypeObject *__pyx_ptype_5numpy_flatiter;
  PyTypeObject *__pyx_ptype_5numpy_broadcast;
  PyTypeObject *__pyx_ptype_5numpy_ndarray;
  PyTypeObject *__pyx_ptype_5numpy_generic;
  PyTypeObject *__pyx_ptype_5numpy_number;
  PyTypeObject *__pyx_ptype_5numpy_integer;
  PyTypeObject *__pyx_ptype_5numpy_signedinteger;
  PyTypeObject *__pyx_ptype_5numpy_unsignedinteger;
  PyTypeObject *__pyx_ptype_5numpy_inexact;
  PyTypeObject *__pyx_ptype_5numpy_floating;
  PyTypeObject *__pyx_ptype_5numpy_complexfloating;
  PyTypeObject *__pyx_ptype_5numpy_flexible;
  PyTypeObject *__pyx_ptype_5numpy_character;
  PyTypeObject *__pyx_ptype_5numpy_ufunc;
  #if CYTHON_USE_MODULE_STATE
  #endif
  #if CYTHON_USE_MODULE_STATE
  #endif
  PyTypeObject *__pyx_ptype_5dysgu_13map_set_utils_Py_BasicIntervalTree;
  PyTypeObject *__pyx_ptype_5dysgu_13map_set_utils_Py_DiGraph;
  PyTypeObject *__pyx_ptype_5dysgu_13map_set_utils_Py_SimpleGraph;
  PyTypeObject *__pyx_ptype_5dysgu_13map_set_utils_Py_Int2IntMap;
  PyTypeObject *__pyx_ptype_5dysgu_13map_set_utils_Py_IntSet;
  PyTypeObject *__pyx_ptype_5dysgu_13map_set_utils_EventResult;
  #if CYTHON_USE_MODULE_STATE
  PyObject *__pyx_type_5dysgu_11sv_category_AlignmentItem;
  #endif
  PyTypeObject *__pyx_ptype_5dysgu_11sv_category_AlignmentItem;
  PyObject *__pyx_kp_u_3to3;
  PyObject *__pyx_kp_u_3to5;
  PyObject *__pyx_kp_u_5to3;
  PyObject *__pyx_kp_u_5to5;
  PyObject *__pyx_n_s_AlignmentItem;
  PyObject *__pyx_n_s_AlignmentItem___reduce_cython;
  PyObject *__pyx_n_s_AlignmentItem___setstate_cython;
  PyObject *__pyx_n_u_BND;
  PyObject *__pyx_n_u_DEL;
  PyObject *__pyx_n_u_DUP;
  PyObject *__pyx_n_u_INS;
  PyObject *__pyx_n_u_INV;
  PyObject *__pyx_n_s_ImportError;
  PyObject *__pyx_n_u_TRA;
  PyObject *__pyx_n_s_TypeError;
  PyObject *__pyx_kp_u__3;
  PyObject *__pyx_kp_u__4;
  PyObject *__pyx_n_s__9;
  PyObject *__pyx_n_s_a_len;
  PyObject *__pyx_n_s_a_node_info;
  PyObject *__pyx_n_s_a_qend;
  PyObject *__pyx_n_s_a_qstart;
  PyObject *__pyx_n_s_asyncio_coroutines;
  PyObject *__pyx_n_s_b_len;
  PyObject *__pyx_n_s_b_node_info;
  PyObject *__pyx_n_s_b_qend;
  PyObject *__pyx_n_s_b_qstart;
  PyObject *__pyx_n_s_chrA;
  PyObject *__pyx_n_s_chrB;
  PyObject *__pyx_n_s_cline_in_traceback;
  PyObject *__pyx_kp_u_disable;
  PyObject *__pyx_n_s_dysgu_map_set_utils;
  PyObject *__pyx_n_s_dysgu_sv_category;
  PyObject *__pyx_n_s_echo;
  PyObject *__pyx_kp_u_enable;
  PyObject *__pyx_n_s_endA;
  PyObject *__pyx_n_s_endB;
  PyObject *__pyx_kp_u_gc;
  PyObject *__pyx_n_s_getstate;
  PyObject *__pyx_n_s_import;
  PyObject *__pyx_n_s_is_coroutine;
  PyObject *__pyx_kp_u_isenabled;
  PyObject *__pyx_n_s_left_clipA;
  PyObject *__pyx_n_s_left_clipB;
  PyObject *__pyx_n_s_main;
  PyObject *__pyx_n_s_name;
  PyObject *__pyx_kp_s_no_default___reduce___due_to_non;
  PyObject *__pyx_kp_u_numpy__core_multiarray_failed_to;
  PyObject *__pyx_kp_u_numpy__core_umath_failed_to_impo;
  PyObject *__pyx_n_s_posA;
  PyObject *__pyx_n_s_posB;
  PyObject *__pyx_n_s_priA;
  PyObject *__pyx_n_s_priB;
  PyObject *__pyx_n_s_pyx_state;
  PyObject *__pyx_n_s_pyx_vtable;
  PyObject *__pyx_n_s_rA;
  PyObject *__pyx_n_s_rB;
  PyObject *__pyx_n_s_read_a;
  PyObject *__pyx_n_s_read_b;
  PyObject *__pyx_n_s_read_overlaps_mate;
  PyObject *__pyx_n_s_reduce;
  PyObject *__pyx_n_s_reduce_cython;
  PyObject *__pyx_n_s_reduce_ex;
  PyObject *__pyx_n_s_right_clipA;
  PyObject *__pyx_n_s_right_clipB;
  PyObject *__pyx_n_s_self;
  PyObject *__pyx_n_s_setstate;
  PyObject *__pyx_n_s_setstate_cython;
  PyObject *__pyx_n_s_strandA;
  PyObject *__pyx_n_s_strandB;
  PyObject *__pyx_kp_s_stringsource;
  PyObject *__pyx_n_s_test;
  PyObject *__pyx_n_u_to;
  PyObject *__pyx_int_0;
  PyObject *__pyx_tuple_;
  PyObject *__pyx_tuple__2;
  PyObject *__pyx_tuple__5;
  PyObject *__pyx_tuple__7;
  PyObject *__pyx_codeobj__6;
  PyObject *__pyx_codeobj__8;
} __pyx_mstate;

#if CYTHON_USE_MODULE_STATE
#ifdef __cplusplus
namespace {
  extern struct PyModuleDef __pyx_moduledef;
} /* anonymous namespace */
#else
static struct PyModuleDef __pyx_moduledef;
#endif

#define __pyx_mstate(o) ((__pyx_mstate *)__Pyx_PyModule_GetState(o))

#define __pyx_mstate_global (__pyx_mstate(PyState_FindModule(&__pyx_moduledef)))

#define __pyx_m (PyState_FindModule(&__pyx_moduledef))
#else
static __pyx_mstate __pyx_mstate_global_static =
#ifdef __cplusplus
    {};
#else
    {0};
#endif
static __pyx_mstate *__pyx_mstate_global = &__pyx_mstate_global_static;
#endif
/* #### Code section: module_state_clear ### */
#if CYTHON_USE_MODULE_STATE
static int __pyx_m_clear(PyObject *m) {
  __pyx_mstate *clear_module_state = __pyx_mstate(m);
  if (!clear_module_state) return 0;
  Py_CLEAR(clear_module_state->__pyx_d);
  Py_CLEAR(clear_module_state->__pyx_b);
  Py_CLEAR(clear_module_state->__pyx_cython_runtime);
  Py_CLEAR(clear_module_state->__pyx_empty_tuple);
  Py_CLEAR(clear_module_state->__pyx_empty_bytes);
  Py_CLEAR(clear_module_state->__pyx_empty_unicode);
  #ifdef __Pyx_CyFunction_USED
  Py_CLEAR(clear_module_state->__pyx_CyFunctionType);
  #endif
  #ifdef __Pyx_FusedFunction_USED
  Py_CLEAR(clear_module_state->__pyx_FusedFunctionType);
  #endif
  Py_CLEAR(clear_module_state->__pyx_ptype_7cpython_4type_type);
  Py_CLEAR(clear_module_state->__pyx_ptype_5numpy_dtype);
  Py_CLEAR(clear_module_state->__pyx_ptype_5numpy_flatiter);
  Py_CLEAR(clear_module_state->__pyx_ptype_5numpy_broadcast);
  Py_CLEAR(clear_module_state->__pyx_ptype_5numpy_ndarray);
  Py_CLEAR(clear_module_state->__pyx_ptype_5numpy_generic);
  Py_CLEAR(clear_module_state->__pyx_ptype_5numpy_number);
  Py_CLEAR(clear_module_state->__pyx_ptype_5numpy_integer);
  Py_CLEAR(clear_module_state->__pyx_ptype_5numpy_signedinteger);
  Py_CLEAR(clear_module_state->__pyx_ptype_5numpy_unsignedinteger);
  Py_CLEAR(clear_module_state->__pyx_ptype_5numpy_inexact);
  Py_CLEAR(clear_module_state->__pyx_ptype_5numpy_floating);
  Py_CLEAR(clear_module_state->__pyx_ptype_5numpy_complexfloating);
  Py_CLEAR(clear_module_state->__pyx_ptype_5numpy_flexible);
  Py_CLEAR(clear_module_state->__pyx_ptype_5numpy_character);
  Py_CLEAR(clear_module_state->__pyx_ptype_5numpy_ufunc);
  Py_CLEAR(clear_module_state->__pyx_ptype_5dysgu_13map_set_utils_Py_BasicIntervalTree);
  Py_CLEAR(clear_module_state->__pyx_ptype_5dysgu_13map_set_utils_Py_DiGraph);
  Py_CLEAR(clear_module_state->__pyx_ptype_5dysgu_13map_set_utils_Py_SimpleGraph);
  Py_CLEAR(clear_module_state->__pyx_ptype_5dysgu_13map_set_utils_Py_Int2IntMap);
  Py_CLEAR(clear_module_state->__pyx_ptype_5dysgu_13map_set_utils_Py_IntSet);
  Py_CLEAR(clear_module_state->__pyx_ptype_5dysgu_13map_set_utils_EventResult);
  Py_CLEAR(clear_module_state->__pyx_ptype_5dysgu_11sv_category_AlignmentItem);
  Py_CLEAR(clear_module_state->__pyx_type_5dysgu_11sv_category_AlignmentItem);
  Py_CLEAR(clear_module_state->__pyx_kp_u_3to3);
  Py_CLEAR(clear_module_state->__pyx_kp_u_3to5);
  Py_CLEAR(clear_module_state->__pyx_kp_u_5to3);
  Py_CLEAR(clear_module_state->__pyx_kp_u_5to5);
  Py_CLEAR(clear_module_state->__pyx_n_s_AlignmentItem);
  Py_CLEAR(clear_module_state->__pyx_n_s_AlignmentItem___reduce_cython);
  Py_CLEAR(clear_module_state->__pyx_n_s_AlignmentItem___setstate_cython);
  Py_CLEAR(clear_module_state->__pyx_n_u_BND);
  Py_CLEAR(clear_module_state->__pyx_n_u_DEL);
  Py_CLEAR(clear_module_state->__pyx_n_u_DUP);
  Py_CLEAR(clear_module_state->__pyx_n_u_INS);
  Py_CLEAR(clear_module_state->__pyx_n_u_INV);
  Py_CLEAR(clear_module_state->__pyx_n_s_ImportError);
  Py_CLEAR(clear_module_state->__pyx_n_u_TRA);
  Py_CLEAR(clear_module_state->__pyx_n_s_TypeError);
  Py_CLEAR(clear_module_state->__pyx_kp_u__3);
  Py_CLEAR(clear_module_state->__pyx_kp_u__4);
  Py_CLEAR(clear_module_state->__pyx_n_s__9);
  Py_CLEAR(clear_module_state->__pyx_n_s_a_len);
  Py_CLEAR(clear_module_state->__pyx_n_s_a_node_info);
  Py_CLEAR(clear_module_state->__pyx_n_s_a_qend);
  Py_CLEAR(clear_module_state->__pyx_n_s_a_qstart);
  Py_CLEAR(clear_module_state->__pyx_n_s_asyncio_coroutines);
  Py_CLEAR(clear_module_state->__pyx_n_s_b_len);
  Py_CLEAR(clear_module_state->__pyx_n_s_b_node_info);
  Py_CLEAR(clear_module_state->__pyx_n_s_b_qend);
  Py_CLEAR(clear_module_state->__pyx_n_s_b_qstart);
  Py_CLEAR(clear_module_state->__pyx_n_s_chrA);
  Py_CLEAR(clear_module_state->__pyx_n_s_chrB);
  Py_CLEAR(clear_module_state->__pyx_n_s_cline_in_traceback);
  Py_CLEAR(clear_module_state->__pyx_kp_u_disable);
  Py_CLEAR(clear_module_state->__pyx_n_s_dysgu_map_set_utils);
  Py_CLEAR(clear_module_state->__pyx_n_s_dysgu_sv_category);
  Py_CLEAR(clear_module_state->__pyx_n_s_echo);
  Py_CLEAR(clear_module_state->__pyx_kp_u_enable);
  Py_CLEAR(clear_module_state->__pyx_n_s_endA);
  Py_CLEAR(clear_module_state->__pyx_n_s_endB);
  Py_CLEAR(clear_module_state->__pyx_kp_u_gc);
  Py_CLEAR(clear_module_state->__pyx_n_s_getstate);
  Py_CLEAR(clear_module_state->__pyx_n_s_import);
  Py_CLEAR(clear_module_state->__pyx_n_s_is_coroutine);
  Py_CLEAR(clear_module_state->__pyx_kp_u_isenabled);
  Py_CLEAR(clear_module_state->__pyx_n_s_left_clipA);
  Py_CLEAR(clear_module_state->__pyx_n_s_left_clipB);
  Py_CLEAR(clear_module_state->__pyx_n_s_main);
  Py_CLEAR(clear_module_state->__pyx_n_s_name);
  Py_CLEAR(clear_module_state->__pyx_kp_s_no_default___reduce___due_to_non);
  Py_CLEAR(clear_module_state->__pyx_kp_u_numpy__core_multiarray_failed_to);
  Py_CLEAR(clear_module_state->__pyx_kp_u_numpy__core_umath_failed_to_impo);
  Py_CLEAR(clear_module_state->__pyx_n_s_posA);
  Py_CLEAR(clear_module_state->__pyx_n_s_posB);
  Py_CLEAR(clear_module_state->__pyx_n_s_priA);
  Py_CLEAR(clear_module_state->__pyx_n_s_priB);
  Py_CLEAR(clear_module_state->__pyx_n_s_pyx_state);
  Py_CLEAR(clear_module_state->__pyx_n_s_pyx_vtable);
  Py_CLEAR(clear_module_state->__pyx_n_s_rA);
  Py_CLEAR(clear_module_state->__pyx_n_s_rB);
  Py_CLEAR(clear_module_state->__pyx_n_s_read_a);
  Py_CLEAR(clear_module_state->__pyx_n_s_read_b);
  Py_CLEAR(clear_module_state->__pyx_n_s_read_overlaps_mate);
  Py_CLEAR(clear_module_state->__pyx_n_s_reduce);
  Py_CLEAR(clear_module_state->__pyx_n_s_reduce_cython);
  Py_CLEAR(clear_module_state->__pyx_n_s_reduce_ex);
  Py_CLEAR(clear_module_state->__pyx_n_s_right_clipA);
  Py_CLEAR(clear_module_state->__pyx_n_s_right_clipB);
  Py_CLEAR(clear_module_state->__pyx_n_s_self);
  Py_CLEAR(clear_module_state->__pyx_n_s_setstate);
  Py_CLEAR(clear_module_state->__pyx_n_s_setstate_cython);
  Py_CLEAR(clear_module_state->__pyx_n_s_strandA);
  Py_CLEAR(clear_module_state->__pyx_n_s_strandB);
  Py_CLEAR(clear_module_state->__pyx_kp_s_stringsource);
  Py_CLEAR(clear_module_state->__pyx_n_s_test);
  Py_CLEAR(clear_module_state->__pyx_n_u_to);
  Py_CLEAR(clear_module_state->__pyx_int_0);
  Py_CLEAR(clear_module_state->__pyx_tuple_);
  Py_CLEAR(clear_module_state->__pyx_tuple__2);
  Py_CLEAR(clear_module_state->__pyx_tuple__5);
  Py_CLEAR(clear_module_state->__pyx_tuple__7);
  Py_CLEAR(clear_module_state->__pyx_codeobj__6);
  Py_CLEAR(clear_module_state->__pyx_codeobj__8);
  return 0;
}
#endif
/* #### Code section: module_state_traverse ### */
#if CYTHON_USE_MODULE_STATE
static int __pyx_m_traverse(PyObject *m, visitproc visit, void *arg) {
  __pyx_mstate *traverse_module_state = __pyx_mstate(m);
  if (!traverse_module_state) return 0;
  Py_VISIT(traverse_module_state->__pyx_d);
  Py_VISIT(traverse_module_state->__pyx_b);
  Py_VISIT(traverse_module_state->__pyx_cython_runtime);
  Py_VISIT(traverse_module_state->__pyx_empty_tuple);
  Py_VISIT(traverse_module_state->__pyx_empty_bytes);
  Py_VISIT(traverse_module_state->__pyx_empty_unicode);
  #ifdef __Pyx_CyFunction_USED
  Py_VISIT(traverse_module_state->__pyx_CyFunctionType);
  #endif
  #ifdef __Pyx_FusedFunction_USED
  Py_VISIT(traverse_module_state->__pyx_FusedFunctionType);
  #endif
  Py_VISIT(traverse_module_state->__pyx_ptype_7cpython_4type_type);
  Py_VISIT(traverse_module_state->__pyx_ptype_5numpy_dtype);
  Py_VISIT(traverse_module_state->__pyx_ptype_5numpy_flatiter);
  Py_VISIT(traverse_module_state->__pyx_ptype_5numpy_broadcast);
  Py_VISIT(traverse_module_state->__pyx_ptype_5numpy_ndarray);
  Py_VISIT(traverse_module_state->__pyx_ptype_5numpy_generic);
  Py_VISIT(traverse_module_state->__pyx_ptype_5numpy_number);
  Py_VISIT(traverse_module_state->__pyx_ptype_5numpy_integer);
  Py_VISIT(traverse_module_state->__pyx_ptype_5numpy_signedinteger);
  Py_VISIT(traverse_module_state->__pyx_ptype_5numpy_unsignedinteger);
  Py_VISIT(traverse_module_state->__pyx_ptype_5numpy_inexact);
  Py_VISIT(traverse_module_state->__pyx_ptype_5numpy_floating);
  Py_VISIT(traverse_module_state->__pyx_ptype_5numpy_complexfloating);
  Py_VISIT(traverse_module_state->__pyx_ptype_5numpy_flexible);
  Py_VISIT(traverse_module_state->__pyx_ptype_5numpy_character);
  Py_VISIT(traverse_module_state->__pyx_ptype_5numpy_ufunc);
  Py_VISIT(traverse_module_state->__pyx_ptype_5dysgu_13map_set_utils_Py_BasicIntervalTree);
  Py_VISIT(traverse_module_state->__pyx_ptype_5dysgu_13map_set_utils_Py_DiGraph);
  Py_VISIT(traverse_module_state->__pyx_ptype_5dysgu_13map_set_utils_Py_SimpleGraph);
  Py_VISIT(traverse_module_state->__pyx_ptype_5dysgu_13map_set_utils_Py_Int2IntMap);
  Py_VISIT(traverse_module_state->__pyx_ptype_5dysgu_13map_set_utils_Py_IntSet);
  Py_VISIT(traverse_module_state->__pyx_ptype_5dysgu_13map_set_utils_EventResult);
  Py_VISIT(traverse_module_state->__pyx_ptype_5dysgu_11sv_category_AlignmentItem);
  Py_VISIT(traverse_module_state->__pyx_type_5dysgu_11sv_category_AlignmentItem);
  Py_VISIT(traverse_module_state->__pyx_kp_u_3to3);
  Py_VISIT(traverse_module_state->__pyx_kp_u_3to5);
  Py_VISIT(traverse_module_state->__pyx_kp_u_5to3);
  Py_VISIT(traverse_module_state->__pyx_kp_u_5to5);
  Py_VISIT(traverse_module_state->__pyx_n_s_AlignmentItem);
  Py_VISIT(traverse_module_state->__pyx_n_s_AlignmentItem___reduce_cython);
  Py_VISIT(traverse_module_state->__pyx_n_s_AlignmentItem___setstate_cython);
  Py_VISIT(traverse_module_state->__pyx_n_u_BND);
  Py_VISIT(traverse_module_state->__pyx_n_u_DEL);
  Py_VISIT(traverse_module_state->__pyx_n_u_DUP);
  Py_VISIT(traverse_module_state->__pyx_n_u_INS);
  Py_VISIT(traverse_module_state->__pyx_n_u_INV);
  Py_VISIT(traverse_module_state->__pyx_n_s_ImportError);
  Py_VISIT(traverse_module_state->__pyx_n_u_TRA);
  Py_VISIT(traverse_module_state->__pyx_n_s_TypeError);
  Py_VISIT(traverse_module_state->__pyx_kp_u__3);
  Py_VISIT(traverse_module_state->__pyx_kp_u__4);
  Py_VISIT(traverse_module_state->__pyx_n_s__9);
  Py_VISIT(traverse_module_state->__pyx_n_s_a_len);
  Py_VISIT(traverse_module_state->__pyx_n_s_a_node_info);
  Py_VISIT(traverse_module_state->__pyx_n_s_a_qend);
  Py_VISIT(traverse_module_state->__pyx_n_s_a_qstart);
  Py_VISIT(traverse_module_state->__pyx_n_s_asyncio_coroutines);
  Py_VISIT(traverse_module_state->__pyx_n_s_b_len);
  Py_VISIT(traverse_module_state->__pyx_n_s_b_node_info);
  Py_VISIT(traverse_module_state->__pyx_n_s_b_qend);
  Py_VISIT(traverse_module_state->__pyx_n_s_b_qstart);
  Py_VISIT(traverse_module_state->__pyx_n_s_chrA);
  Py_VISIT(traverse_module_state->__pyx_n_s_chrB);
  Py_VISIT(traverse_module_state->__pyx_n_s_cline_in_traceback);
  Py_VISIT(traverse_module_state->__pyx_kp_u_disable);
  Py_VISIT(traverse_module_state->__pyx_n_s_dysgu_map_set_utils);
  Py_VISIT(traverse_module_state->__pyx_n_s_dysgu_sv_category);
  Py_VISIT(traverse_module_state->__pyx_n_s_echo);
  Py_VISIT(traverse_module_state->__pyx_kp_u_enable);
  Py_VISIT(traverse_module_state->__pyx_n_s_endA);
  Py_VISIT(traverse_module_state->__pyx_n_s_endB);
  Py_VISIT(traverse_module_state->__pyx_kp_u_gc);
  Py_VISIT(traverse_module_state->__pyx_n_s_getstate);
  Py_VISIT(traverse_module_state->__pyx_n_s_import);
  Py_VISIT(traverse_module_state->__pyx_n_s_is_coroutine);
  Py_VISIT(traverse_module_state->__pyx_kp_u_isenabled);
  Py_VISIT(traverse_module_state->__pyx_n_s_left_clipA);
  Py_VISIT(traverse_module_state->__pyx_n_s_left_clipB);
  Py_VISIT(traverse_module_state->__pyx_n_s_main);
  Py_VISIT(traverse_module_state->__pyx_n_s_name);
  Py_VISIT(traverse_module_state->__pyx_kp_s_no_default___reduce___due_to_non);
  Py_VISIT(traverse_module_state->__pyx_kp_u_numpy__core_multiarray_failed_to);
  Py_VISIT(traverse_module_state->__pyx_kp_u_numpy__core_umath_failed_to_impo);
  Py_VISIT(traverse_module_state->__pyx_n_s_posA);
  Py_VISIT(traverse_module_state->__pyx_n_s_posB);
  Py_VISIT(traverse_module_state->__pyx_n_s_priA);
  Py_VISIT(traverse_module_state->__pyx_n_s_priB);
  Py_VISIT(traverse_module_state->__pyx_n_s_pyx_state);
  Py_VISIT(traverse_module_state->__pyx_n_s_pyx_vtable);
  Py_VISIT(traverse_module_state->__pyx_n_s_rA);
  Py_VISIT(traverse_module_state->__pyx_n_s_rB);
  Py_VISIT(traverse_module_state->__pyx_n_s_read_a);
  Py_VISIT(traverse_module_state->__pyx_n_s_read_b);
  Py_VISIT(traverse_module_state->__pyx_n_s_read_overlaps_mate);
  Py_VISIT(traverse_module_state->__pyx_n_s_reduce);
  Py_VISIT(traverse_module_state->__pyx_n_s_reduce_cython);
  Py_VISIT(traverse_module_state->__pyx_n_s_reduce_ex);
  Py_VISIT(traverse_module_state->__pyx_n_s_right_clipA);
  Py_VISIT(traverse_module_state->__pyx_n_s_right_clipB);
  Py_VISIT(traverse_module_state->__pyx_n_s_self);
  Py_VISIT(traverse_module_state->__pyx_n_s_setstate);
  Py_VISIT(traverse_module_state->__pyx_n_s_setstate_cython);
  Py_VISIT(traverse_module_state->__pyx_n_s_strandA);
  Py_VISIT(traverse_module_state->__pyx_n_s_strandB);
  Py_VISIT(traverse_module_state->__pyx_kp_s_stringsource);
  Py_VISIT(traverse_module_state->__pyx_n_s_test);
  Py_VISIT(traverse_module_state->__pyx_n_u_to);
  Py_VISIT(traverse_module_state->__pyx_int_0);
  Py_VISIT(traverse_module_state->__pyx_tuple_);
  Py_VISIT(traverse_module_state->__pyx_tuple__2);
  Py_VISIT(traverse_module_state->__pyx_tuple__5);
  Py_VISIT(traverse_module_state->__pyx_tuple__7);
  Py_VISIT(traverse_module_state->__pyx_codeobj__6);
  Py_VISIT(traverse_module_state->__pyx_codeobj__8);
  return 0;
}
#endif
/* #### Code section: module_state_defines ### */
#define __pyx_d __pyx_mstate_global->__pyx_d
#define __pyx_b __pyx_mstate_global->__pyx_b
#define __pyx_cython_runtime __pyx_mstate_global->__pyx_cython_runtime
#define __pyx_empty_tuple __pyx_mstate_global->__pyx_empty_tuple
#define __pyx_empty_bytes __pyx_mstate_global->__pyx_empty_bytes
#define __pyx_empty_unicode __pyx_mstate_global->__pyx_empty_unicode
#ifdef __Pyx_CyFunction_USED
#define __pyx_CyFunctionType __pyx_mstate_global->__pyx_CyFunctionType
#endif
#ifdef __Pyx_FusedFunction_USED
#define __pyx_FusedFunctionType __pyx_mstate_global->__pyx_FusedFunctionType
#endif
#ifdef __Pyx_Generator_USED
#define __pyx_GeneratorType __pyx_mstate_global->__pyx_GeneratorType
#endif
#ifdef __Pyx_IterableCoroutine_USED
#define __pyx_IterableCoroutineType __pyx_mstate_global->__pyx_IterableCoroutineType
#endif
#ifdef __Pyx_Coroutine_USED
#define __pyx_CoroutineAwaitType __pyx_mstate_global->__pyx_CoroutineAwaitType
#endif
#ifdef __Pyx_Coroutine_USED
#define __pyx_CoroutineType __pyx_mstate_global->__pyx_CoroutineType
#endif
#if CYTHON_USE_MODULE_STATE
#endif
#if CYTHON_USE_MODULE_STATE
#endif
#if CYTHON_USE_MODULE_STATE
#endif
#if CYTHON_USE_MODULE_STATE
#endif
#if CYTHON_USE_MODULE_STATE
#endif
#if CYTHON_USE_MODULE_STATE
#endif
#if CYTHON_USE_MODULE_STATE
#endif
#define __pyx_ptype_7cpython_4type_type __pyx_mstate_global->__pyx_ptype_7cpython_4type_type
#if CYTHON_USE_MODULE_STATE
#endif
#if CYTHON_USE_MODULE_STATE
#endif
#if CYTHON_USE_MODULE_STATE
#endif
#if CYTHON_USE_MODULE_STATE
#endif
#if CYTHON_USE_MODULE_STATE
#endif
#define __pyx_ptype_5numpy_dtype __pyx_mstate_global->__pyx_ptype_5numpy_dtype
#define __pyx_ptype_5numpy_flatiter __pyx_mstate_global->__pyx_ptype_5numpy_flatiter
#define __pyx_ptype_5numpy_broadcast __pyx_mstate_global->__pyx_ptype_5numpy_broadcast
#define __pyx_ptype_5numpy_ndarray __pyx_mstate_global->__pyx_ptype_5numpy_ndarray
#define __pyx_ptype_5numpy_generic __pyx_mstate_global->__pyx_ptype_5numpy_generic
#define __pyx_ptype_5numpy_number __pyx_mstate_global->__pyx_ptype_5numpy_number
#define __pyx_ptype_5numpy_integer __pyx_mstate_global->__pyx_ptype_5numpy_integer
#define __pyx_ptype_5numpy_signedinteger __pyx_mstate_global->__pyx_ptype_5numpy_signedinteger
#define __pyx_ptype_5numpy_unsignedinteger __pyx_mstate_global->__pyx_ptype_5numpy_unsignedinteger
#define __pyx_ptype_5numpy_inexact __pyx_mstate_global->__pyx_ptype_5numpy_inexact
#define __pyx_ptype_5numpy_floating __pyx_mstate_global->__pyx_ptype_5numpy_floating
#define __pyx_ptype_5numpy_complexfloating __pyx_mstate_global->__pyx_ptype_5numpy_complexfloating
#define __pyx_ptype_5numpy_flexible __pyx_mstate_global->__pyx_ptype_5numpy_flexible
#define __pyx_ptype_5numpy_character __pyx_mstate_global->__pyx_ptype_5numpy_character
#define __pyx_ptype_5numpy_ufunc __pyx_mstate_global->__pyx_ptype_5numpy_ufunc
#if CYTHON_USE_MODULE_STATE
#endif
#if CYTHON_USE_MODULE_STATE
#endif
#define __pyx_ptype_5dysgu_13map_set_utils_Py_BasicIntervalTree __pyx_mstate_global->__pyx_ptype_5dysgu_13map_set_utils_Py_BasicIntervalTree
#define __pyx_ptype_5dysgu_13map_set_utils_Py_DiGraph __pyx_mstate_global->__pyx_ptype_5dysgu_13map_set_utils_Py_DiGraph
#define __pyx_ptype_5dysgu_13map_set_utils_Py_SimpleGraph __pyx_mstate_global->__pyx_ptype_5dysgu_13map_set_utils_Py_SimpleGraph
#define __pyx_ptype_5dysgu_13map_set_utils_Py_Int2IntMap __pyx_mstate_global->__pyx_ptype_5dysgu_13map_set_utils_Py_Int2IntMap
#define __pyx_ptype_5dysgu_13map_set_utils_Py_IntSet __pyx_mstate_global->__pyx_ptype_5dysgu_13map_set_utils_Py_IntSet
#define __pyx_ptype_5dysgu_13map_set_utils_EventResult __pyx_mstate_global->__pyx_ptype_5dysgu_13map_set_utils_EventResult
#if CYTHON_USE_MODULE_STATE
#define __pyx_type_5dysgu_11sv_category_AlignmentItem __pyx_mstate_global->__pyx_type_5dysgu_11sv_category_AlignmentItem
#endif
#define __pyx_ptype_5dysgu_11sv_category_AlignmentItem __pyx_mstate_global->__pyx_ptype_5dysgu_11sv_category_AlignmentItem
#define __pyx_kp_u_3to3 __pyx_mstate_global->__pyx_kp_u_3to3
#define __pyx_kp_u_3to5 __pyx_mstate_global->__pyx_kp_u_3to5
#define __pyx_kp_u_5to3 __pyx_mstate_global->__pyx_kp_u_5to3
#define __pyx_kp_u_5to5 __pyx_mstate_global->__pyx_kp_u_5to5
#define __pyx_n_s_AlignmentItem __pyx_mstate_global->__pyx_n_s_AlignmentItem
#define __pyx_n_s_AlignmentItem___reduce_cython __pyx_mstate_global->__pyx_n_s_AlignmentItem___reduce_cython
#define __pyx_n_s_AlignmentItem___setstate_cython __pyx_mstate_global->__pyx_n_s_AlignmentItem___setstate_cython
#define __pyx_n_u_BND __pyx_mstate_global->__pyx_n_u_BND
#define __pyx_n_u_DEL __pyx_mstate_global->__pyx_n_u_DEL
#define __pyx_n_u_DUP __pyx_mstate_global->__pyx_n_u_DUP
#define __pyx_n_u_INS __pyx_mstate_global->__pyx_n_u_INS
#define __pyx_n_u_INV __pyx_mstate_global->__pyx_n_u_INV
#define __pyx_n_s_ImportError __pyx_mstate_global->__pyx_n_s_ImportError
#define __pyx_n_u_TRA __pyx_mstate_global->__pyx_n_u_TRA
#define __pyx_n_s_TypeError __pyx_mstate_global->__pyx_n_s_TypeError
#define __pyx_kp_u__3 __pyx_mstate_global->__pyx_kp_u__3
#define __pyx_kp_u__4 __pyx_mstate_global->__pyx_kp_u__4
#define __pyx_n_s__9 __pyx_mstate_global->__pyx_n_s__9
#define __pyx_n_s_a_len __pyx_mstate_global->__pyx_n_s_a_len
#define __pyx_n_s_a_node_info __pyx_mstate_global->__pyx_n_s_a_node_info
#define __pyx_n_s_a_qend __pyx_mstate_global->__pyx_n_s_a_qend
#define __pyx_n_s_a_qstart __pyx_mstate_global->__pyx_n_s_a_qstart
#define __pyx_n_s_asyncio_coroutines __pyx_mstate_global->__pyx_n_s_asyncio_coroutines
#define __pyx_n_s_b_len __pyx_mstate_global->__pyx_n_s_b_len
#define __pyx_n_s_b_node_info __pyx_mstate_global->__pyx_n_s_b_node_info
#define __pyx_n_s_b_qend __pyx_mstate_global->__pyx_n_s_b_qend
#define __pyx_n_s_b_qstart __pyx_mstate_global->__pyx_n_s_b_qstart
#define __pyx_n_s_chrA __pyx_mstate_global->__pyx_n_s_chrA
#define __pyx_n_s_chrB __pyx_mstate_global->__pyx_n_s_chrB
#define __pyx_n_s_cline_in_traceback __pyx_mstate_global->__pyx_n_s_cline_in_traceback
#define __pyx_kp_u_disable __pyx_mstate_global->__pyx_kp_u_disable
#define __pyx_n_s_dysgu_map_set_utils __pyx_mstate_global->__pyx_n_s_dysgu_map_set_utils
#define __pyx_n_s_dysgu_sv_category __pyx_mstate_global->__pyx_n_s_dysgu_sv_category
#define __pyx_n_s_echo __pyx_mstate_global->__pyx_n_s_echo
#define __pyx_kp_u_enable __pyx_mstate_global->__pyx_kp_u_enable
#define __pyx_n_s_endA __pyx_mstate_global->__pyx_n_s_endA
#define __pyx_n_s_endB __pyx_mstate_global->__pyx_n_s_endB
#define __pyx_kp_u_gc __pyx_mstate_global->__pyx_kp_u_gc
#define __pyx_n_s_getstate __pyx_mstate_global->__pyx_n_s_getstate
#define __pyx_n_s_import __pyx_mstate_global->__pyx_n_s_import
#define __pyx_n_s_is_coroutine __pyx_mstate_global->__pyx_n_s_is_coroutine
#define __pyx_kp_u_isenabled __pyx_mstate_global->__pyx_kp_u_isenabled
#define __pyx_n_s_left_clipA __pyx_mstate_global->__pyx_n_s_left_clipA
#define __pyx_n_s_left_clipB __pyx_mstate_global->__pyx_n_s_left_clipB
#define __pyx_n_s_main __pyx_mstate_global->__pyx_n_s_main
#define __pyx_n_s_name __pyx_mstate_global->__pyx_n_s_name
#define __pyx_kp_s_no_default___reduce___due_to_non __pyx_mstate_global->__pyx_kp_s_no_default___reduce___due_to_non
#define __pyx_kp_u_numpy__core_multiarray_failed_to __pyx_mstate_global->__pyx_kp_u_numpy__core_multiarray_failed_to
#define __pyx_kp_u_numpy__core_umath_failed_to_impo __pyx_mstate_global->__pyx_kp_u_numpy__core_umath_failed_to_impo
#define __pyx_n_s_posA __pyx_mstate_global->__pyx_n_s_posA
#define __pyx_n_s_posB __pyx_mstate_global->__pyx_n_s_posB
#define __pyx_n_s_priA __pyx_mstate_global->__pyx_n_s_priA
#define __pyx_n_s_priB __pyx_mstate_global->__pyx_n_s_priB
#define __pyx_n_s_pyx_state __pyx_mstate_global->__pyx_n_s_pyx_state
#define __pyx_n_s_pyx_vtable __pyx_mstate_global->__pyx_n_s_pyx_vtable
#define __pyx_n_s_rA __pyx_mstate_global->__pyx_n_s_rA
#define __pyx_n_s_rB __pyx_mstate_global->__pyx_n_s_rB
#define __pyx_n_s_read_a __pyx_mstate_global->__pyx_n_s_read_a
#define __pyx_n_s_read_b __pyx_mstate_global->__pyx_n_s_read_b
#define __pyx_n_s_read_overlaps_mate __pyx_mstate_global->__pyx_n_s_read_overlaps_mate
#define __pyx_n_s_reduce __pyx_mstate_global->__pyx_n_s_reduce
#define __pyx_n_s_reduce_cython __pyx_mstate_global->__pyx_n_s_reduce_cython
#define __pyx_n_s_reduce_ex __pyx_mstate_global->__pyx_n_s_reduce_ex
#define __pyx_n_s_right_clipA __pyx_mstate_global->__pyx_n_s_right_clipA
#define __pyx_n_s_right_clipB __pyx_mstate_global->__pyx_n_s_right_clipB
#define __pyx_n_s_self __pyx_mstate_global->__pyx_n_s_self
#define __pyx_n_s_setstate __pyx_mstate_global->__pyx_n_s_setstate
#define __pyx_n_s_setstate_cython __pyx_mstate_global->__pyx_n_s_setstate_cython
#define __pyx_n_s_strandA __pyx_mstate_global->__pyx_n_s_strandA
#define __pyx_n_s_strandB __pyx_mstate_global->__pyx_n_s_strandB
#define __pyx_kp_s_stringsource __pyx_mstate_global->__pyx_kp_s_stringsource
#define __pyx_n_s_test __pyx_mstate_global->__pyx_n_s_test
#define __pyx_n_u_to __pyx_mstate_global->__pyx_n_u_to
#define __pyx_int_0 __pyx_mstate_global->__pyx_int_0
#define __pyx_tuple_ __pyx_mstate_global->__pyx_tuple_
#define __pyx_tuple__2 __pyx_mstate_global->__pyx_tuple__2
#define __pyx_tuple__5 __pyx_mstate_global->__pyx_tuple__5
#define __pyx_tuple__7 __pyx_mstate_global->__pyx_tuple__7
#define __pyx_codeobj__6 __pyx_mstate_global->__pyx_codeobj__6
#define __pyx_codeobj__8 __pyx_mstate_global->__pyx_codeobj__8
/* #### Code section: module_code ### */

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":286
 * 
 *         @property
 *         cdef inline npy_intp itemsize(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             return PyDataType_ELSIZE(self)
 * 
 */

static CYTHON_INLINE npy_intp __pyx_f_5numpy_5dtype_8itemsize_itemsize(PyArray_Descr *__pyx_v_self) {
  npy_intp __pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":287
 *         @property
 *         cdef inline npy_intp itemsize(self) noexcept nogil:
 *             return PyDataType_ELSIZE(self)             # <<<<<<<<<<<<<<
 * 
 *         @property
 */
  __pyx_r = PyDataType_ELSIZE(__pyx_v_self);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":286
 * 
 *         @property
 *         cdef inline npy_intp itemsize(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             return PyDataType_ELSIZE(self)
 * 
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":290
 * 
 *         @property
 *         cdef inline npy_intp alignment(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             return PyDataType_ALIGNMENT(self)
 * 
 */

static CYTHON_INLINE npy_intp __pyx_f_5numpy_5dtype_9alignment_alignment(PyArray_Descr *__pyx_v_self) {
  npy_intp __pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":291
 *         @property
 *         cdef inline npy_intp alignment(self) noexcept nogil:
 *             return PyDataType_ALIGNMENT(self)             # <<<<<<<<<<<<<<
 * 
 *         # Use fields/names with care as they may be NULL.  You must check
 */
  __pyx_r = PyDataType_ALIGNMENT(__pyx_v_self);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":290
 * 
 *         @property
 *         cdef inline npy_intp alignment(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             return PyDataType_ALIGNMENT(self)
 * 
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":296
 *         # for this using PyDataType_HASFIELDS.
 *         @property
 *         cdef inline object fields(self):             # <<<<<<<<<<<<<<
 *             return <object>PyDataType_FIELDS(self)
 * 
 */

static CYTHON_INLINE PyObject *__pyx_f_5numpy_5dtype_6fields_fields(PyArray_Descr *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1;
  __Pyx_RefNannySetupContext("fields", 1);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":297
 *         @property
 *         cdef inline object fields(self):
 *             return <object>PyDataType_FIELDS(self)             # <<<<<<<<<<<<<<
 * 
 *         @property
 */
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = PyDataType_FIELDS(__pyx_v_self);
  __Pyx_INCREF(((PyObject *)__pyx_t_1));
  __pyx_r = ((PyObject *)__pyx_t_1);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":296
 *         # for this using PyDataType_HASFIELDS.
 *         @property
 *         cdef inline object fields(self):             # <<<<<<<<<<<<<<
 *             return <object>PyDataType_FIELDS(self)
 * 
 */

  /* function exit code */
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":300
 * 
 *         @property
 *         cdef inline tuple names(self):             # <<<<<<<<<<<<<<
 *             return <tuple>PyDataType_NAMES(self)
 * 
 */

static CYTHON_INLINE PyObject *__pyx_f_5numpy_5dtype_5names_names(PyArray_Descr *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1;
  __Pyx_RefNannySetupContext("names", 1);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":301
 *         @property
 *         cdef inline tuple names(self):
 *             return <tuple>PyDataType_NAMES(self)             # <<<<<<<<<<<<<<
 * 
 *         # Use PyDataType_HASSUBARRAY to test whether this field is
 */
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = PyDataType_NAMES(__pyx_v_self);
  __Pyx_INCREF(((PyObject*)__pyx_t_1));
  __pyx_r = ((PyObject*)__pyx_t_1);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":300
 * 
 *         @property
 *         cdef inline tuple names(self):             # <<<<<<<<<<<<<<
 *             return <tuple>PyDataType_NAMES(self)
 * 
 */

  /* function exit code */
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":307
 *         # this field via the inline helper method PyDataType_SHAPE.
 *         @property
 *         cdef inline PyArray_ArrayDescr* subarray(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             return PyDataType_SUBARRAY(self)
 * 
 */

static CYTHON_INLINE PyArray_ArrayDescr *__pyx_f_5numpy_5dtype_8subarray_subarray(PyArray_Descr *__pyx_v_self) {
  PyArray_ArrayDescr *__pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":308
 *         @property
 *         cdef inline PyArray_ArrayDescr* subarray(self) noexcept nogil:
 *             return PyDataType_SUBARRAY(self)             # <<<<<<<<<<<<<<
 * 
 *         @property
 */
  __pyx_r = PyDataType_SUBARRAY(__pyx_v_self);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":307
 *         # this field via the inline helper method PyDataType_SHAPE.
 *         @property
 *         cdef inline PyArray_ArrayDescr* subarray(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             return PyDataType_SUBARRAY(self)
 * 
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":311
 * 
 *         @property
 *         cdef inline npy_uint64 flags(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """The data types flags."""
 *             return PyDataType_FLAGS(self)
 */

static CYTHON_INLINE npy_uint64 __pyx_f_5numpy_5dtype_5flags_flags(PyArray_Descr *__pyx_v_self) {
  npy_uint64 __pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":313
 *         cdef inline npy_uint64 flags(self) noexcept nogil:
 *             """The data types flags."""
 *             return PyDataType_FLAGS(self)             # <<<<<<<<<<<<<<
 * 
 * 
 */
  __pyx_r = PyDataType_FLAGS(__pyx_v_self);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":311
 * 
 *         @property
 *         cdef inline npy_uint64 flags(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """The data types flags."""
 *             return PyDataType_FLAGS(self)
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":323
 * 
 *         @property
 *         cdef inline int numiter(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """The number of arrays that need to be broadcast to the same shape."""
 *             return PyArray_MultiIter_NUMITER(self)
 */

static CYTHON_INLINE int __pyx_f_5numpy_9broadcast_7numiter_numiter(PyArrayMultiIterObject *__pyx_v_self) {
  int __pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":325
 *         cdef inline int numiter(self) noexcept nogil:
 *             """The number of arrays that need to be broadcast to the same shape."""
 *             return PyArray_MultiIter_NUMITER(self)             # <<<<<<<<<<<<<<
 * 
 *         @property
 */
  __pyx_r = PyArray_MultiIter_NUMITER(__pyx_v_self);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":323
 * 
 *         @property
 *         cdef inline int numiter(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """The number of arrays that need to be broadcast to the same shape."""
 *             return PyArray_MultiIter_NUMITER(self)
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":328
 * 
 *         @property
 *         cdef inline npy_intp size(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """The total broadcasted size."""
 *             return PyArray_MultiIter_SIZE(self)
 */

static CYTHON_INLINE npy_intp __pyx_f_5numpy_9broadcast_4size_size(PyArrayMultiIterObject *__pyx_v_self) {
  npy_intp __pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":330
 *         cdef inline npy_intp size(self) noexcept nogil:
 *             """The total broadcasted size."""
 *             return PyArray_MultiIter_SIZE(self)             # <<<<<<<<<<<<<<
 * 
 *         @property
 */
  __pyx_r = PyArray_MultiIter_SIZE(__pyx_v_self);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":328
 * 
 *         @property
 *         cdef inline npy_intp size(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """The total broadcasted size."""
 *             return PyArray_MultiIter_SIZE(self)
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":333
 * 
 *         @property
 *         cdef inline npy_intp index(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """The current (1-d) index into the broadcasted result."""
 *             return PyArray_MultiIter_INDEX(self)
 */

static CYTHON_INLINE npy_intp __pyx_f_5numpy_9broadcast_5index_index(PyArrayMultiIterObject *__pyx_v_self) {
  npy_intp __pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":335
 *         cdef inline npy_intp index(self) noexcept nogil:
 *             """The current (1-d) index into the broadcasted result."""
 *             return PyArray_MultiIter_INDEX(self)             # <<<<<<<<<<<<<<
 * 
 *         @property
 */
  __pyx_r = PyArray_MultiIter_INDEX(__pyx_v_self);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":333
 * 
 *         @property
 *         cdef inline npy_intp index(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """The current (1-d) index into the broadcasted result."""
 *             return PyArray_MultiIter_INDEX(self)
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":338
 * 
 *         @property
 *         cdef inline int nd(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """The number of dimensions in the broadcasted result."""
 *             return PyArray_MultiIter_NDIM(self)
 */

static CYTHON_INLINE int __pyx_f_5numpy_9broadcast_2nd_nd(PyArrayMultiIterObject *__pyx_v_self) {
  int __pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":340
 *         cdef inline int nd(self) noexcept nogil:
 *             """The number of dimensions in the broadcasted result."""
 *             return PyArray_MultiIter_NDIM(self)             # <<<<<<<<<<<<<<
 * 
 *         @property
 */
  __pyx_r = PyArray_MultiIter_NDIM(__pyx_v_self);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":338
 * 
 *         @property
 *         cdef inline int nd(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """The number of dimensions in the broadcasted result."""
 *             return PyArray_MultiIter_NDIM(self)
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":343
 * 
 *         @property
 *         cdef inline npy_intp* dimensions(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """The shape of the broadcasted result."""
 *             return PyArray_MultiIter_DIMS(self)
 */

static CYTHON_INLINE npy_intp *__pyx_f_5numpy_9broadcast_10dimensions_dimensions(PyArrayMultiIterObject *__pyx_v_self) {
  npy_intp *__pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":345
 *         cdef inline npy_intp* dimensions(self) noexcept nogil:
 *             """The shape of the broadcasted result."""
 *             return PyArray_MultiIter_DIMS(self)             # <<<<<<<<<<<<<<
 * 
 *         @property
 */
  __pyx_r = PyArray_MultiIter_DIMS(__pyx_v_self);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":343
 * 
 *         @property
 *         cdef inline npy_intp* dimensions(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """The shape of the broadcasted result."""
 *             return PyArray_MultiIter_DIMS(self)
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":348
 * 
 *         @property
 *         cdef inline void** iters(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """An array of iterator objects that holds the iterators for the arrays to be broadcast together.
 *             On return, the iterators are adjusted for broadcasting."""
 */

static CYTHON_INLINE void **__pyx_f_5numpy_9broadcast_5iters_iters(PyArrayMultiIterObject *__pyx_v_self) {
  void **__pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":351
 *             """An array of iterator objects that holds the iterators for the arrays to be broadcast together.
 *             On return, the iterators are adjusted for broadcasting."""
 *             return PyArray_MultiIter_ITERS(self)             # <<<<<<<<<<<<<<
 * 
 * 
 */
  __pyx_r = PyArray_MultiIter_ITERS(__pyx_v_self);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":348
 * 
 *         @property
 *         cdef inline void** iters(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """An array of iterator objects that holds the iterators for the arrays to be broadcast together.
 *             On return, the iterators are adjusted for broadcasting."""
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":366
 * 
 *         @property
 *         cdef inline PyObject* base(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """Returns a borrowed reference to the object owning the data/memory.
 *             """
 */

static CYTHON_INLINE PyObject *__pyx_f_5numpy_7ndarray_4base_base(PyArrayObject *__pyx_v_self) {
  PyObject *__pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":369
 *             """Returns a borrowed reference to the object owning the data/memory.
 *             """
 *             return PyArray_BASE(self)             # <<<<<<<<<<<<<<
 * 
 *         @property
 */
  __pyx_r = PyArray_BASE(__pyx_v_self);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":366
 * 
 *         @property
 *         cdef inline PyObject* base(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """Returns a borrowed reference to the object owning the data/memory.
 *             """
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":372
 * 
 *         @property
 *         cdef inline dtype descr(self):             # <<<<<<<<<<<<<<
 *             """Returns an owned reference to the dtype of the array.
 *             """
 */

static CYTHON_INLINE PyArray_Descr *__pyx_f_5numpy_7ndarray_5descr_descr(PyArrayObject *__pyx_v_self) {
  PyArray_Descr *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyArray_Descr *__pyx_t_1;
  __Pyx_RefNannySetupContext("descr", 1);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":375
 *             """Returns an owned reference to the dtype of the array.
 *             """
 *             return <dtype>PyArray_DESCR(self)             # <<<<<<<<<<<<<<
 * 
 *         @property
 */
  __Pyx_XDECREF((PyObject *)__pyx_r);
  __pyx_t_1 = PyArray_DESCR(__pyx_v_self);
  __Pyx_INCREF((PyObject *)((PyArray_Descr *)__pyx_t_1));
  __pyx_r = ((PyArray_Descr *)__pyx_t_1);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":372
 * 
 *         @property
 *         cdef inline dtype descr(self):             # <<<<<<<<<<<<<<
 *             """Returns an owned reference to the dtype of the array.
 *             """
 */

  /* function exit code */
  __pyx_L0:;
  __Pyx_XGIVEREF((PyObject *)__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":378
 * 
 *         @property
 *         cdef inline int ndim(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """Returns the number of dimensions in the array.
 *             """
 */

static CYTHON_INLINE int __pyx_f_5numpy_7ndarray_4ndim_ndim(PyArrayObject *__pyx_v_self) {
  int __pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":381
 *             """Returns the number of dimensions in the array.
 *             """
 *             return PyArray_NDIM(self)             # <<<<<<<<<<<<<<
 * 
 *         @property
 */
  __pyx_r = PyArray_NDIM(__pyx_v_self);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":378
 * 
 *         @property
 *         cdef inline int ndim(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """Returns the number of dimensions in the array.
 *             """
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":384
 * 
 *         @property
 *         cdef inline npy_intp *shape(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """Returns a pointer to the dimensions/shape of the array.
 *             The number of elements matches the number of dimensions of the array (ndim).
 */

static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_5shape_shape(PyArrayObject *__pyx_v_self) {
  npy_intp *__pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":389
 *             Can return NULL for 0-dimensional arrays.
 *             """
 *             return PyArray_DIMS(self)             # <<<<<<<<<<<<<<
 * 
 *         @property
 */
  __pyx_r = PyArray_DIMS(__pyx_v_self);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":384
 * 
 *         @property
 *         cdef inline npy_intp *shape(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """Returns a pointer to the dimensions/shape of the array.
 *             The number of elements matches the number of dimensions of the array (ndim).
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":392
 * 
 *         @property
 *         cdef inline npy_intp *strides(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """Returns a pointer to the strides of the array.
 *             The number of elements matches the number of dimensions of the array (ndim).
 */

static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_7strides_strides(PyArrayObject *__pyx_v_self) {
  npy_intp *__pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":396
 *             The number of elements matches the number of dimensions of the array (ndim).
 *             """
 *             return PyArray_STRIDES(self)             # <<<<<<<<<<<<<<
 * 
 *         @property
 */
  __pyx_r = PyArray_STRIDES(__pyx_v_self);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":392
 * 
 *         @property
 *         cdef inline npy_intp *strides(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """Returns a pointer to the strides of the array.
 *             The number of elements matches the number of dimensions of the array (ndim).
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":399
 * 
 *         @property
 *         cdef inline npy_intp size(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """Returns the total size (in number of elements) of the array.
 *             """
 */

static CYTHON_INLINE npy_intp __pyx_f_5numpy_7ndarray_4size_size(PyArrayObject *__pyx_v_self) {
  npy_intp __pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":402
 *             """Returns the total size (in number of elements) of the array.
 *             """
 *             return PyArray_SIZE(self)             # <<<<<<<<<<<<<<
 * 
 *         @property
 */
  __pyx_r = PyArray_SIZE(__pyx_v_self);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":399
 * 
 *         @property
 *         cdef inline npy_intp size(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """Returns the total size (in number of elements) of the array.
 *             """
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":405
 * 
 *         @property
 *         cdef inline char* data(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """The pointer to the data buffer as a char*.
 *             This is provided for legacy reasons to avoid direct struct field access.
 */

static CYTHON_INLINE char *__pyx_f_5numpy_7ndarray_4data_data(PyArrayObject *__pyx_v_self) {
  char *__pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":411
 *             of `PyArray_DATA()` instead, which returns a 'void*'.
 *             """
 *             return PyArray_BYTES(self)             # <<<<<<<<<<<<<<
 * 
 * 
 */
  __pyx_r = PyArray_BYTES(__pyx_v_self);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":405
 * 
 *         @property
 *         cdef inline char* data(self) noexcept nogil:             # <<<<<<<<<<<<<<
 *             """The pointer to the data buffer as a char*.
 *             This is provided for legacy reasons to avoid direct struct field access.
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":807
 * ctypedef long double complex clongdouble_t
 * 
 * cdef inline object PyArray_MultiIterNew1(a):             # <<<<<<<<<<<<<<
 *     return PyArray_MultiIterNew(1, <void*>a)
 * 
 */

static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__pyx_v_a) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("PyArray_MultiIterNew1", 1);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":808
 * 
 * cdef inline object PyArray_MultiIterNew1(a):
 *     return PyArray_MultiIterNew(1, <void*>a)             # <<<<<<<<<<<<<<
 * 
 * cdef inline object PyArray_MultiIterNew2(a, b):
 */
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = PyArray_MultiIterNew(1, ((void *)__pyx_v_a)); if (unlikely(!__pyx_t_1)) __PYX_ERR(1, 808, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":807
 * ctypedef long double complex clongdouble_t
 * 
 * cdef inline object PyArray_MultiIterNew1(a):             # <<<<<<<<<<<<<<
 *     return PyArray_MultiIterNew(1, <void*>a)
 * 
 */

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("numpy.PyArray_MultiIterNew1", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = 0;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":810
 *     return PyArray_MultiIterNew(1, <void*>a)
 * 
 * cdef inline object PyArray_MultiIterNew2(a, b):             # <<<<<<<<<<<<<<
 *     return PyArray_MultiIterNew(2, <void*>a, <void*>b)
 * 
 */

static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__pyx_v_a, PyObject *__pyx_v_b) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("PyArray_MultiIterNew2", 1);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":811
 * 
 * cdef inline object PyArray_MultiIterNew2(a, b):
 *     return PyArray_MultiIterNew(2, <void*>a, <void*>b)             # <<<<<<<<<<<<<<
 * 
 * cdef inline object PyArray_MultiIterNew3(a, b, c):
 */
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = PyArray_MultiIterNew(2, ((void *)__pyx_v_a), ((void *)__pyx_v_b)); if (unlikely(!__pyx_t_1)) __PYX_ERR(1, 811, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":810
 *     return PyArray_MultiIterNew(1, <void*>a)
 * 
 * cdef inline object PyArray_MultiIterNew2(a, b):             # <<<<<<<<<<<<<<
 *     return PyArray_MultiIterNew(2, <void*>a, <void*>b)
 * 
 */

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("numpy.PyArray_MultiIterNew2", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = 0;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":813
 *     return PyArray_MultiIterNew(2, <void*>a, <void*>b)
 * 
 * cdef inline object PyArray_MultiIterNew3(a, b, c):             # <<<<<<<<<<<<<<
 *     return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c)
 * 
 */

static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("PyArray_MultiIterNew3", 1);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":814
 * 
 * cdef inline object PyArray_MultiIterNew3(a, b, c):
 *     return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c)             # <<<<<<<<<<<<<<
 * 
 * cdef inline object PyArray_MultiIterNew4(a, b, c, d):
 */
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = PyArray_MultiIterNew(3, ((void *)__pyx_v_a), ((void *)__pyx_v_b), ((void *)__pyx_v_c)); if (unlikely(!__pyx_t_1)) __PYX_ERR(1, 814, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":813
 *     return PyArray_MultiIterNew(2, <void*>a, <void*>b)
 * 
 * cdef inline object PyArray_MultiIterNew3(a, b, c):             # <<<<<<<<<<<<<<
 *     return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c)
 * 
 */

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("numpy.PyArray_MultiIterNew3", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = 0;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":816
 *     return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c)
 * 
 * cdef inline object PyArray_MultiIterNew4(a, b, c, d):             # <<<<<<<<<<<<<<
 *     return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d)
 * 
 */

static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("PyArray_MultiIterNew4", 1);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":817
 * 
 * cdef inline object PyArray_MultiIterNew4(a, b, c, d):
 *     return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d)             # <<<<<<<<<<<<<<
 * 
 * cdef inline object PyArray_MultiIterNew5(a, b, c, d, e):
 */
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = PyArray_MultiIterNew(4, ((void *)__pyx_v_a), ((void *)__pyx_v_b), ((void *)__pyx_v_c), ((void *)__pyx_v_d)); if (unlikely(!__pyx_t_1)) __PYX_ERR(1, 817, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":816
 *     return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c)
 * 
 * cdef inline object PyArray_MultiIterNew4(a, b, c, d):             # <<<<<<<<<<<<<<
 *     return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d)
 * 
 */

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("numpy.PyArray_MultiIterNew4", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = 0;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":819
 *     return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d)
 * 
 * cdef inline object PyArray_MultiIterNew5(a, b, c, d, e):             # <<<<<<<<<<<<<<
 *     return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e)
 * 
 */

static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d, PyObject *__pyx_v_e) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("PyArray_MultiIterNew5", 1);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":820
 * 
 * cdef inline object PyArray_MultiIterNew5(a, b, c, d, e):
 *     return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e)             # <<<<<<<<<<<<<<
 * 
 * cdef inline tuple PyDataType_SHAPE(dtype d):
 */
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = PyArray_MultiIterNew(5, ((void *)__pyx_v_a), ((void *)__pyx_v_b), ((void *)__pyx_v_c), ((void *)__pyx_v_d), ((void *)__pyx_v_e)); if (unlikely(!__pyx_t_1)) __PYX_ERR(1, 820, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":819
 *     return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d)
 * 
 * cdef inline object PyArray_MultiIterNew5(a, b, c, d, e):             # <<<<<<<<<<<<<<
 *     return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e)
 * 
 */

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("numpy.PyArray_MultiIterNew5", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = 0;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":822
 *     return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e)
 * 
 * cdef inline tuple PyDataType_SHAPE(dtype d):             # <<<<<<<<<<<<<<
 *     if PyDataType_HASSUBARRAY(d):
 *         return <tuple>d.subarray.shape
 */

static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__pyx_v_d) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  int __pyx_t_1;
  PyObject *__pyx_t_2;
  __Pyx_RefNannySetupContext("PyDataType_SHAPE", 1);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":823
 * 
 * cdef inline tuple PyDataType_SHAPE(dtype d):
 *     if PyDataType_HASSUBARRAY(d):             # <<<<<<<<<<<<<<
 *         return <tuple>d.subarray.shape
 *     else:
 */
  __pyx_t_1 = PyDataType_HASSUBARRAY(__pyx_v_d);
  if (__pyx_t_1) {

    /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":824
 * cdef inline tuple PyDataType_SHAPE(dtype d):
 *     if PyDataType_HASSUBARRAY(d):
 *         return <tuple>d.subarray.shape             # <<<<<<<<<<<<<<
 *     else:
 *         return ()
 */
    __Pyx_XDECREF(__pyx_r);
    __pyx_t_2 = __pyx_f_5numpy_5dtype_8subarray_subarray(__pyx_v_d)->shape;
    __Pyx_INCREF(((PyObject*)__pyx_t_2));
    __pyx_r = ((PyObject*)__pyx_t_2);
    goto __pyx_L0;

    /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":823
 * 
 * cdef inline tuple PyDataType_SHAPE(dtype d):
 *     if PyDataType_HASSUBARRAY(d):             # <<<<<<<<<<<<<<
 *         return <tuple>d.subarray.shape
 *     else:
 */
  }

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":826
 *         return <tuple>d.subarray.shape
 *     else:
 *         return ()             # <<<<<<<<<<<<<<
 * 
 * 
 */
  /*else*/ {
    __Pyx_XDECREF(__pyx_r);
    __Pyx_INCREF(__pyx_empty_tuple);
    __pyx_r = __pyx_empty_tuple;
    goto __pyx_L0;
  }

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":822
 *     return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e)
 * 
 * cdef inline tuple PyDataType_SHAPE(dtype d):             # <<<<<<<<<<<<<<
 *     if PyDataType_HASSUBARRAY(d):
 *         return <tuple>d.subarray.shape
 */

  /* function exit code */
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1010
 *     int _import_umath() except -1
 * 
 * cdef inline void set_array_base(ndarray arr, object base) except *:             # <<<<<<<<<<<<<<
 *     Py_INCREF(base) # important to do this before stealing the reference below!
 *     PyArray_SetBaseObject(arr, base)
 */

static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_arr, PyObject *__pyx_v_base) {
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1011
 * 
 * cdef inline void set_array_base(ndarray arr, object base) except *:
 *     Py_INCREF(base) # important to do this before stealing the reference below!             # <<<<<<<<<<<<<<
 *     PyArray_SetBaseObject(arr, base)
 * 
 */
  Py_INCREF(__pyx_v_base);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1012
 * cdef inline void set_array_base(ndarray arr, object base) except *:
 *     Py_INCREF(base) # important to do this before stealing the reference below!
 *     PyArray_SetBaseObject(arr, base)             # <<<<<<<<<<<<<<
 * 
 * cdef inline object get_array_base(ndarray arr):
 */
  __pyx_t_1 = PyArray_SetBaseObject(__pyx_v_arr, __pyx_v_base); if (unlikely(__pyx_t_1 == ((int)-1))) __PYX_ERR(1, 1012, __pyx_L1_error)

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1010
 *     int _import_umath() except -1
 * 
 * cdef inline void set_array_base(ndarray arr, object base) except *:             # <<<<<<<<<<<<<<
 *     Py_INCREF(base) # important to do this before stealing the reference below!
 *     PyArray_SetBaseObject(arr, base)
 */

  /* function exit code */
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("numpy.set_array_base", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_L0:;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1014
 *     PyArray_SetBaseObject(arr, base)
 * 
 * cdef inline object get_array_base(ndarray arr):             # <<<<<<<<<<<<<<
 *     base = PyArray_BASE(arr)
 *     if base is NULL:
 */

static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__pyx_v_arr) {
  PyObject *__pyx_v_base;
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  int __pyx_t_1;
  __Pyx_RefNannySetupContext("get_array_base", 1);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1015
 * 
 * cdef inline object get_array_base(ndarray arr):
 *     base = PyArray_BASE(arr)             # <<<<<<<<<<<<<<
 *     if base is NULL:
 *         return None
 */
  __pyx_v_base = PyArray_BASE(__pyx_v_arr);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1016
 * cdef inline object get_array_base(ndarray arr):
 *     base = PyArray_BASE(arr)
 *     if base is NULL:             # <<<<<<<<<<<<<<
 *         return None
 *     return <object>base
 */
  __pyx_t_1 = (__pyx_v_base == NULL);
  if (__pyx_t_1) {

    /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1017
 *     base = PyArray_BASE(arr)
 *     if base is NULL:
 *         return None             # <<<<<<<<<<<<<<
 *     return <object>base
 * 
 */
    __Pyx_XDECREF(__pyx_r);
    __pyx_r = Py_None; __Pyx_INCREF(Py_None);
    goto __pyx_L0;

    /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1016
 * cdef inline object get_array_base(ndarray arr):
 *     base = PyArray_BASE(arr)
 *     if base is NULL:             # <<<<<<<<<<<<<<
 *         return None
 *     return <object>base
 */
  }

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1018
 *     if base is NULL:
 *         return None
 *     return <object>base             # <<<<<<<<<<<<<<
 * 
 * # Versions of the import_* functions which are more suitable for
 */
  __Pyx_XDECREF(__pyx_r);
  __Pyx_INCREF(((PyObject *)__pyx_v_base));
  __pyx_r = ((PyObject *)__pyx_v_base);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1014
 *     PyArray_SetBaseObject(arr, base)
 * 
 * cdef inline object get_array_base(ndarray arr):             # <<<<<<<<<<<<<<
 *     base = PyArray_BASE(arr)
 *     if base is NULL:
 */

  /* function exit code */
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1022
 * # Versions of the import_* functions which are more suitable for
 * # Cython code.
 * cdef inline int import_array() except -1:             # <<<<<<<<<<<<<<
 *     try:
 *         __pyx_import_array()
 */

static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  PyObject *__pyx_t_2 = NULL;
  PyObject *__pyx_t_3 = NULL;
  int __pyx_t_4;
  PyObject *__pyx_t_5 = NULL;
  PyObject *__pyx_t_6 = NULL;
  PyObject *__pyx_t_7 = NULL;
  PyObject *__pyx_t_8 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("import_array", 1);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1023
 * # Cython code.
 * cdef inline int import_array() except -1:
 *     try:             # <<<<<<<<<<<<<<
 *         __pyx_import_array()
 *     except Exception:
 */
  {
    __Pyx_PyThreadState_declare
    __Pyx_PyThreadState_assign
    __Pyx_ExceptionSave(&__pyx_t_1, &__pyx_t_2, &__pyx_t_3);
    __Pyx_XGOTREF(__pyx_t_1);
    __Pyx_XGOTREF(__pyx_t_2);
    __Pyx_XGOTREF(__pyx_t_3);
    /*try:*/ {

      /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1024
 * cdef inline int import_array() except -1:
 *     try:
 *         __pyx_import_array()             # <<<<<<<<<<<<<<
 *     except Exception:
 *         raise ImportError("numpy._core.multiarray failed to import")
 */
      __pyx_t_4 = _import_array(); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(1, 1024, __pyx_L3_error)

      /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1023
 * # Cython code.
 * cdef inline int import_array() except -1:
 *     try:             # <<<<<<<<<<<<<<
 *         __pyx_import_array()
 *     except Exception:
 */
    }
    __Pyx_XDECREF(__pyx_t_1); __pyx_t_1 = 0;
    __Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0;
    __Pyx_XDECREF(__pyx_t_3); __pyx_t_3 = 0;
    goto __pyx_L8_try_end;
    __pyx_L3_error:;

    /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1025
 *     try:
 *         __pyx_import_array()
 *     except Exception:             # <<<<<<<<<<<<<<
 *         raise ImportError("numpy._core.multiarray failed to import")
 * 
 */
    __pyx_t_4 = __Pyx_PyErr_ExceptionMatches(((PyObject *)(&((PyTypeObject*)PyExc_Exception)[0])));
    if (__pyx_t_4) {
      __Pyx_AddTraceback("numpy.import_array", __pyx_clineno, __pyx_lineno, __pyx_filename);
      if (__Pyx_GetException(&__pyx_t_5, &__pyx_t_6, &__pyx_t_7) < 0) __PYX_ERR(1, 1025, __pyx_L5_except_error)
      __Pyx_XGOTREF(__pyx_t_5);
      __Pyx_XGOTREF(__pyx_t_6);
      __Pyx_XGOTREF(__pyx_t_7);

      /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1026
 *         __pyx_import_array()
 *     except Exception:
 *         raise ImportError("numpy._core.multiarray failed to import")             # <<<<<<<<<<<<<<
 * 
 * cdef inline int import_umath() except -1:
 */
      __pyx_t_8 = __Pyx_PyObject_Call(__pyx_builtin_ImportError, __pyx_tuple_, NULL); if (unlikely(!__pyx_t_8)) __PYX_ERR(1, 1026, __pyx_L5_except_error)
      __Pyx_GOTREF(__pyx_t_8);
      __Pyx_Raise(__pyx_t_8, 0, 0, 0);
      __Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0;
      __PYX_ERR(1, 1026, __pyx_L5_except_error)
    }
    goto __pyx_L5_except_error;

    /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1023
 * # Cython code.
 * cdef inline int import_array() except -1:
 *     try:             # <<<<<<<<<<<<<<
 *         __pyx_import_array()
 *     except Exception:
 */
    __pyx_L5_except_error:;
    __Pyx_XGIVEREF(__pyx_t_1);
    __Pyx_XGIVEREF(__pyx_t_2);
    __Pyx_XGIVEREF(__pyx_t_3);
    __Pyx_ExceptionReset(__pyx_t_1, __pyx_t_2, __pyx_t_3);
    goto __pyx_L1_error;
    __pyx_L8_try_end:;
  }

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1022
 * # Versions of the import_* functions which are more suitable for
 * # Cython code.
 * cdef inline int import_array() except -1:             # <<<<<<<<<<<<<<
 *     try:
 *         __pyx_import_array()
 */

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_5);
  __Pyx_XDECREF(__pyx_t_6);
  __Pyx_XDECREF(__pyx_t_7);
  __Pyx_XDECREF(__pyx_t_8);
  __Pyx_AddTraceback("numpy.import_array", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1028
 *         raise ImportError("numpy._core.multiarray failed to import")
 * 
 * cdef inline int import_umath() except -1:             # <<<<<<<<<<<<<<
 *     try:
 *         _import_umath()
 */

static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  PyObject *__pyx_t_2 = NULL;
  PyObject *__pyx_t_3 = NULL;
  int __pyx_t_4;
  PyObject *__pyx_t_5 = NULL;
  PyObject *__pyx_t_6 = NULL;
  PyObject *__pyx_t_7 = NULL;
  PyObject *__pyx_t_8 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("import_umath", 1);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1029
 * 
 * cdef inline int import_umath() except -1:
 *     try:             # <<<<<<<<<<<<<<
 *         _import_umath()
 *     except Exception:
 */
  {
    __Pyx_PyThreadState_declare
    __Pyx_PyThreadState_assign
    __Pyx_ExceptionSave(&__pyx_t_1, &__pyx_t_2, &__pyx_t_3);
    __Pyx_XGOTREF(__pyx_t_1);
    __Pyx_XGOTREF(__pyx_t_2);
    __Pyx_XGOTREF(__pyx_t_3);
    /*try:*/ {

      /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1030
 * cdef inline int import_umath() except -1:
 *     try:
 *         _import_umath()             # <<<<<<<<<<<<<<
 *     except Exception:
 *         raise ImportError("numpy._core.umath failed to import")
 */
      __pyx_t_4 = _import_umath(); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(1, 1030, __pyx_L3_error)

      /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1029
 * 
 * cdef inline int import_umath() except -1:
 *     try:             # <<<<<<<<<<<<<<
 *         _import_umath()
 *     except Exception:
 */
    }
    __Pyx_XDECREF(__pyx_t_1); __pyx_t_1 = 0;
    __Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0;
    __Pyx_XDECREF(__pyx_t_3); __pyx_t_3 = 0;
    goto __pyx_L8_try_end;
    __pyx_L3_error:;

    /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1031
 *     try:
 *         _import_umath()
 *     except Exception:             # <<<<<<<<<<<<<<
 *         raise ImportError("numpy._core.umath failed to import")
 * 
 */
    __pyx_t_4 = __Pyx_PyErr_ExceptionMatches(((PyObject *)(&((PyTypeObject*)PyExc_Exception)[0])));
    if (__pyx_t_4) {
      __Pyx_AddTraceback("numpy.import_umath", __pyx_clineno, __pyx_lineno, __pyx_filename);
      if (__Pyx_GetException(&__pyx_t_5, &__pyx_t_6, &__pyx_t_7) < 0) __PYX_ERR(1, 1031, __pyx_L5_except_error)
      __Pyx_XGOTREF(__pyx_t_5);
      __Pyx_XGOTREF(__pyx_t_6);
      __Pyx_XGOTREF(__pyx_t_7);

      /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1032
 *         _import_umath()
 *     except Exception:
 *         raise ImportError("numpy._core.umath failed to import")             # <<<<<<<<<<<<<<
 * 
 * cdef inline int import_ufunc() except -1:
 */
      __pyx_t_8 = __Pyx_PyObject_Call(__pyx_builtin_ImportError, __pyx_tuple__2, NULL); if (unlikely(!__pyx_t_8)) __PYX_ERR(1, 1032, __pyx_L5_except_error)
      __Pyx_GOTREF(__pyx_t_8);
      __Pyx_Raise(__pyx_t_8, 0, 0, 0);
      __Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0;
      __PYX_ERR(1, 1032, __pyx_L5_except_error)
    }
    goto __pyx_L5_except_error;

    /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1029
 * 
 * cdef inline int import_umath() except -1:
 *     try:             # <<<<<<<<<<<<<<
 *         _import_umath()
 *     except Exception:
 */
    __pyx_L5_except_error:;
    __Pyx_XGIVEREF(__pyx_t_1);
    __Pyx_XGIVEREF(__pyx_t_2);
    __Pyx_XGIVEREF(__pyx_t_3);
    __Pyx_ExceptionReset(__pyx_t_1, __pyx_t_2, __pyx_t_3);
    goto __pyx_L1_error;
    __pyx_L8_try_end:;
  }

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1028
 *         raise ImportError("numpy._core.multiarray failed to import")
 * 
 * cdef inline int import_umath() except -1:             # <<<<<<<<<<<<<<
 *     try:
 *         _import_umath()
 */

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_5);
  __Pyx_XDECREF(__pyx_t_6);
  __Pyx_XDECREF(__pyx_t_7);
  __Pyx_XDECREF(__pyx_t_8);
  __Pyx_AddTraceback("numpy.import_umath", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1034
 *         raise ImportError("numpy._core.umath failed to import")
 * 
 * cdef inline int import_ufunc() except -1:             # <<<<<<<<<<<<<<
 *     try:
 *         _import_umath()
 */

static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  PyObject *__pyx_t_2 = NULL;
  PyObject *__pyx_t_3 = NULL;
  int __pyx_t_4;
  PyObject *__pyx_t_5 = NULL;
  PyObject *__pyx_t_6 = NULL;
  PyObject *__pyx_t_7 = NULL;
  PyObject *__pyx_t_8 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("import_ufunc", 1);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1035
 * 
 * cdef inline int import_ufunc() except -1:
 *     try:             # <<<<<<<<<<<<<<
 *         _import_umath()
 *     except Exception:
 */
  {
    __Pyx_PyThreadState_declare
    __Pyx_PyThreadState_assign
    __Pyx_ExceptionSave(&__pyx_t_1, &__pyx_t_2, &__pyx_t_3);
    __Pyx_XGOTREF(__pyx_t_1);
    __Pyx_XGOTREF(__pyx_t_2);
    __Pyx_XGOTREF(__pyx_t_3);
    /*try:*/ {

      /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1036
 * cdef inline int import_ufunc() except -1:
 *     try:
 *         _import_umath()             # <<<<<<<<<<<<<<
 *     except Exception:
 *         raise ImportError("numpy._core.umath failed to import")
 */
      __pyx_t_4 = _import_umath(); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(1, 1036, __pyx_L3_error)

      /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1035
 * 
 * cdef inline int import_ufunc() except -1:
 *     try:             # <<<<<<<<<<<<<<
 *         _import_umath()
 *     except Exception:
 */
    }
    __Pyx_XDECREF(__pyx_t_1); __pyx_t_1 = 0;
    __Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0;
    __Pyx_XDECREF(__pyx_t_3); __pyx_t_3 = 0;
    goto __pyx_L8_try_end;
    __pyx_L3_error:;

    /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1037
 *     try:
 *         _import_umath()
 *     except Exception:             # <<<<<<<<<<<<<<
 *         raise ImportError("numpy._core.umath failed to import")
 * 
 */
    __pyx_t_4 = __Pyx_PyErr_ExceptionMatches(((PyObject *)(&((PyTypeObject*)PyExc_Exception)[0])));
    if (__pyx_t_4) {
      __Pyx_AddTraceback("numpy.import_ufunc", __pyx_clineno, __pyx_lineno, __pyx_filename);
      if (__Pyx_GetException(&__pyx_t_5, &__pyx_t_6, &__pyx_t_7) < 0) __PYX_ERR(1, 1037, __pyx_L5_except_error)
      __Pyx_XGOTREF(__pyx_t_5);
      __Pyx_XGOTREF(__pyx_t_6);
      __Pyx_XGOTREF(__pyx_t_7);

      /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1038
 *         _import_umath()
 *     except Exception:
 *         raise ImportError("numpy._core.umath failed to import")             # <<<<<<<<<<<<<<
 * 
 * 
 */
      __pyx_t_8 = __Pyx_PyObject_Call(__pyx_builtin_ImportError, __pyx_tuple__2, NULL); if (unlikely(!__pyx_t_8)) __PYX_ERR(1, 1038, __pyx_L5_except_error)
      __Pyx_GOTREF(__pyx_t_8);
      __Pyx_Raise(__pyx_t_8, 0, 0, 0);
      __Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0;
      __PYX_ERR(1, 1038, __pyx_L5_except_error)
    }
    goto __pyx_L5_except_error;

    /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1035
 * 
 * cdef inline int import_ufunc() except -1:
 *     try:             # <<<<<<<<<<<<<<
 *         _import_umath()
 *     except Exception:
 */
    __pyx_L5_except_error:;
    __Pyx_XGIVEREF(__pyx_t_1);
    __Pyx_XGIVEREF(__pyx_t_2);
    __Pyx_XGIVEREF(__pyx_t_3);
    __Pyx_ExceptionReset(__pyx_t_1, __pyx_t_2, __pyx_t_3);
    goto __pyx_L1_error;
    __pyx_L8_try_end:;
  }

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1034
 *         raise ImportError("numpy._core.umath failed to import")
 * 
 * cdef inline int import_ufunc() except -1:             # <<<<<<<<<<<<<<
 *     try:
 *         _import_umath()
 */

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_5);
  __Pyx_XDECREF(__pyx_t_6);
  __Pyx_XDECREF(__pyx_t_7);
  __Pyx_XDECREF(__pyx_t_8);
  __Pyx_AddTraceback("numpy.import_ufunc", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1041
 * 
 * 
 * cdef inline bint is_timedelta64_object(object obj) noexcept:             # <<<<<<<<<<<<<<
 *     """
 *     Cython equivalent of `isinstance(obj, np.timedelta64)`
 */

static CYTHON_INLINE int __pyx_f_5numpy_is_timedelta64_object(PyObject *__pyx_v_obj) {
  int __pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1053
 *     bool
 *     """
 *     return PyObject_TypeCheck(obj, &PyTimedeltaArrType_Type)             # <<<<<<<<<<<<<<
 * 
 * 
 */
  __pyx_r = PyObject_TypeCheck(__pyx_v_obj, (&PyTimedeltaArrType_Type));
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1041
 * 
 * 
 * cdef inline bint is_timedelta64_object(object obj) noexcept:             # <<<<<<<<<<<<<<
 *     """
 *     Cython equivalent of `isinstance(obj, np.timedelta64)`
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1056
 * 
 * 
 * cdef inline bint is_datetime64_object(object obj) noexcept:             # <<<<<<<<<<<<<<
 *     """
 *     Cython equivalent of `isinstance(obj, np.datetime64)`
 */

static CYTHON_INLINE int __pyx_f_5numpy_is_datetime64_object(PyObject *__pyx_v_obj) {
  int __pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1068
 *     bool
 *     """
 *     return PyObject_TypeCheck(obj, &PyDatetimeArrType_Type)             # <<<<<<<<<<<<<<
 * 
 * 
 */
  __pyx_r = PyObject_TypeCheck(__pyx_v_obj, (&PyDatetimeArrType_Type));
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1056
 * 
 * 
 * cdef inline bint is_datetime64_object(object obj) noexcept:             # <<<<<<<<<<<<<<
 *     """
 *     Cython equivalent of `isinstance(obj, np.datetime64)`
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1071
 * 
 * 
 * cdef inline npy_datetime get_datetime64_value(object obj) noexcept nogil:             # <<<<<<<<<<<<<<
 *     """
 *     returns the int64 value underlying scalar numpy datetime64 object
 */

static CYTHON_INLINE npy_datetime __pyx_f_5numpy_get_datetime64_value(PyObject *__pyx_v_obj) {
  npy_datetime __pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1078
 *     also needed.  That can be found using `get_datetime64_unit`.
 *     """
 *     return (<PyDatetimeScalarObject*>obj).obval             # <<<<<<<<<<<<<<
 * 
 * 
 */
  __pyx_r = ((PyDatetimeScalarObject *)__pyx_v_obj)->obval;
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1071
 * 
 * 
 * cdef inline npy_datetime get_datetime64_value(object obj) noexcept nogil:             # <<<<<<<<<<<<<<
 *     """
 *     returns the int64 value underlying scalar numpy datetime64 object
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1081
 * 
 * 
 * cdef inline npy_timedelta get_timedelta64_value(object obj) noexcept nogil:             # <<<<<<<<<<<<<<
 *     """
 *     returns the int64 value underlying scalar numpy timedelta64 object
 */

static CYTHON_INLINE npy_timedelta __pyx_f_5numpy_get_timedelta64_value(PyObject *__pyx_v_obj) {
  npy_timedelta __pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1085
 *     returns the int64 value underlying scalar numpy timedelta64 object
 *     """
 *     return (<PyTimedeltaScalarObject*>obj).obval             # <<<<<<<<<<<<<<
 * 
 * 
 */
  __pyx_r = ((PyTimedeltaScalarObject *)__pyx_v_obj)->obval;
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1081
 * 
 * 
 * cdef inline npy_timedelta get_timedelta64_value(object obj) noexcept nogil:             # <<<<<<<<<<<<<<
 *     """
 *     returns the int64 value underlying scalar numpy timedelta64 object
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1088
 * 
 * 
 * cdef inline NPY_DATETIMEUNIT get_datetime64_unit(object obj) noexcept nogil:             # <<<<<<<<<<<<<<
 *     """
 *     returns the unit part of the dtype for a numpy datetime64 object.
 */

static CYTHON_INLINE NPY_DATETIMEUNIT __pyx_f_5numpy_get_datetime64_unit(PyObject *__pyx_v_obj) {
  NPY_DATETIMEUNIT __pyx_r;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1092
 *     returns the unit part of the dtype for a numpy datetime64 object.
 *     """
 *     return <NPY_DATETIMEUNIT>(<PyDatetimeScalarObject*>obj).obmeta.base             # <<<<<<<<<<<<<<
 * 
 * 
 */
  __pyx_r = ((NPY_DATETIMEUNIT)((PyDatetimeScalarObject *)__pyx_v_obj)->obmeta.base);
  goto __pyx_L0;

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1088
 * 
 * 
 * cdef inline NPY_DATETIMEUNIT get_datetime64_unit(object obj) noexcept nogil:             # <<<<<<<<<<<<<<
 *     """
 *     returns the unit part of the dtype for a numpy datetime64 object.
 */

  /* function exit code */
  __pyx_L0:;
  return __pyx_r;
}

/* "dysgu/sv_category.pyx":9
 * cdef class AlignmentItem:
 *     """Data holder for classifying alignments into SV types"""
 *     def __cinit__(self, int chrA, int chrB, int priA, int priB, int rA, int rB, int posA, int endA, int posB, int endB,             # <<<<<<<<<<<<<<
 *                   int strandA, int strandB, int left_clipA, int right_clipA, int left_clipB, int right_clipB,
 *                   int a_qstart, int a_qend, int b_qstart, int b_qend, int a_len, int b_len,
 */

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_1__cinit__(PyObject *__pyx_v_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_1__cinit__(PyObject *__pyx_v_self, PyObject *__pyx_args, PyObject *__pyx_kwds) {
  int __pyx_v_chrA;
  int __pyx_v_chrB;
  int __pyx_v_priA;
  int __pyx_v_priB;
  int __pyx_v_rA;
  int __pyx_v_rB;
  int __pyx_v_posA;
  int __pyx_v_endA;
  int __pyx_v_posB;
  int __pyx_v_endB;
  int __pyx_v_strandA;
  int __pyx_v_strandB;
  int __pyx_v_left_clipA;
  int __pyx_v_right_clipA;
  int __pyx_v_left_clipB;
  int __pyx_v_right_clipB;
  int __pyx_v_a_qstart;
  int __pyx_v_a_qend;
  int __pyx_v_b_qstart;
  int __pyx_v_b_qend;
  int __pyx_v_a_len;
  int __pyx_v_b_len;
  int __pyx_v_read_overlaps_mate;
  PyObject *__pyx_v_read_a = 0;
  PyObject *__pyx_v_read_b = 0;
  PyObject *__pyx_v_a_node_info = 0;
  PyObject *__pyx_v_b_node_info = 0;
  CYTHON_UNUSED Py_ssize_t __pyx_nargs;
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject* values[27] = {0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0};
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__cinit__ (wrapper)", 0);
  #if CYTHON_ASSUME_SAFE_MACROS
  __pyx_nargs = PyTuple_GET_SIZE(__pyx_args);
  #else
  __pyx_nargs = PyTuple_Size(__pyx_args); if (unlikely(__pyx_nargs < 0)) return -1;
  #endif
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  {
    PyObject **__pyx_pyargnames[] = {&__pyx_n_s_chrA,&__pyx_n_s_chrB,&__pyx_n_s_priA,&__pyx_n_s_priB,&__pyx_n_s_rA,&__pyx_n_s_rB,&__pyx_n_s_posA,&__pyx_n_s_endA,&__pyx_n_s_posB,&__pyx_n_s_endB,&__pyx_n_s_strandA,&__pyx_n_s_strandB,&__pyx_n_s_left_clipA,&__pyx_n_s_right_clipA,&__pyx_n_s_left_clipB,&__pyx_n_s_right_clipB,&__pyx_n_s_a_qstart,&__pyx_n_s_a_qend,&__pyx_n_s_b_qstart,&__pyx_n_s_b_qend,&__pyx_n_s_a_len,&__pyx_n_s_b_len,&__pyx_n_s_read_overlaps_mate,&__pyx_n_s_read_a,&__pyx_n_s_read_b,&__pyx_n_s_a_node_info,&__pyx_n_s_b_node_info,0};

    /* "dysgu/sv_category.pyx":12
 *                   int strandA, int strandB, int left_clipA, int right_clipA, int left_clipB, int right_clipB,
 *                   int a_qstart, int a_qend, int b_qstart, int b_qend, int a_len, int b_len,
 *                   int read_overlaps_mate, read_a, read_b, a_node_info=None, b_node_info=None):             # <<<<<<<<<<<<<<
 *         self.chrA = chrA
 *         self.chrB = chrB
 */
    values[25] = __Pyx_Arg_NewRef_VARARGS(((PyObject *)Py_None));
    values[26] = __Pyx_Arg_NewRef_VARARGS(((PyObject *)Py_None));
    if (__pyx_kwds) {
      Py_ssize_t kw_args;
      switch (__pyx_nargs) {
        case 27: values[26] = __Pyx_Arg_VARARGS(__pyx_args, 26);
        CYTHON_FALLTHROUGH;
        case 26: values[25] = __Pyx_Arg_VARARGS(__pyx_args, 25);
        CYTHON_FALLTHROUGH;
        case 25: values[24] = __Pyx_Arg_VARARGS(__pyx_args, 24);
        CYTHON_FALLTHROUGH;
        case 24: values[23] = __Pyx_Arg_VARARGS(__pyx_args, 23);
        CYTHON_FALLTHROUGH;
        case 23: values[22] = __Pyx_Arg_VARARGS(__pyx_args, 22);
        CYTHON_FALLTHROUGH;
        case 22: values[21] = __Pyx_Arg_VARARGS(__pyx_args, 21);
        CYTHON_FALLTHROUGH;
        case 21: values[20] = __Pyx_Arg_VARARGS(__pyx_args, 20);
        CYTHON_FALLTHROUGH;
        case 20: values[19] = __Pyx_Arg_VARARGS(__pyx_args, 19);
        CYTHON_FALLTHROUGH;
        case 19: values[18] = __Pyx_Arg_VARARGS(__pyx_args, 18);
        CYTHON_FALLTHROUGH;
        case 18: values[17] = __Pyx_Arg_VARARGS(__pyx_args, 17);
        CYTHON_FALLTHROUGH;
        case 17: values[16] = __Pyx_Arg_VARARGS(__pyx_args, 16);
        CYTHON_FALLTHROUGH;
        case 16: values[15] = __Pyx_Arg_VARARGS(__pyx_args, 15);
        CYTHON_FALLTHROUGH;
        case 15: values[14] = __Pyx_Arg_VARARGS(__pyx_args, 14);
        CYTHON_FALLTHROUGH;
        case 14: values[13] = __Pyx_Arg_VARARGS(__pyx_args, 13);
        CYTHON_FALLTHROUGH;
        case 13: values[12] = __Pyx_Arg_VARARGS(__pyx_args, 12);
        CYTHON_FALLTHROUGH;
        case 12: values[11] = __Pyx_Arg_VARARGS(__pyx_args, 11);
        CYTHON_FALLTHROUGH;
        case 11: values[10] = __Pyx_Arg_VARARGS(__pyx_args, 10);
        CYTHON_FALLTHROUGH;
        case 10: values[9] = __Pyx_Arg_VARARGS(__pyx_args, 9);
        CYTHON_FALLTHROUGH;
        case  9: values[8] = __Pyx_Arg_VARARGS(__pyx_args, 8);
        CYTHON_FALLTHROUGH;
        case  8: values[7] = __Pyx_Arg_VARARGS(__pyx_args, 7);
        CYTHON_FALLTHROUGH;
        case  7: values[6] = __Pyx_Arg_VARARGS(__pyx_args, 6);
        CYTHON_FALLTHROUGH;
        case  6: values[5] = __Pyx_Arg_VARARGS(__pyx_args, 5);
        CYTHON_FALLTHROUGH;
        case  5: values[4] = __Pyx_Arg_VARARGS(__pyx_args, 4);
        CYTHON_FALLTHROUGH;
        case  4: values[3] = __Pyx_Arg_VARARGS(__pyx_args, 3);
        CYTHON_FALLTHROUGH;
        case  3: values[2] = __Pyx_Arg_VARARGS(__pyx_args, 2);
        CYTHON_FALLTHROUGH;
        case  2: values[1] = __Pyx_Arg_VARARGS(__pyx_args, 1);
        CYTHON_FALLTHROUGH;
        case  1: values[0] = __Pyx_Arg_VARARGS(__pyx_args, 0);
        CYTHON_FALLTHROUGH;
        case  0: break;
        default: goto __pyx_L5_argtuple_error;
      }
      kw_args = __Pyx_NumKwargs_VARARGS(__pyx_kwds);
      switch (__pyx_nargs) {
        case  0:
        if (likely((values[0] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_chrA)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[0]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else goto __pyx_L5_argtuple_error;
        CYTHON_FALLTHROUGH;
        case  1:
        if (likely((values[1] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_chrB)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[1]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 1); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case  2:
        if (likely((values[2] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_priA)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[2]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 2); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case  3:
        if (likely((values[3] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_priB)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[3]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 3); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case  4:
        if (likely((values[4] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_rA)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[4]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 4); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case  5:
        if (likely((values[5] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_rB)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[5]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 5); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case  6:
        if (likely((values[6] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_posA)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[6]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 6); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case  7:
        if (likely((values[7] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_endA)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[7]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 7); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case  8:
        if (likely((values[8] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_posB)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[8]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 8); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case  9:
        if (likely((values[9] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_endB)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[9]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 9); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 10:
        if (likely((values[10] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_strandA)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[10]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 10); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 11:
        if (likely((values[11] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_strandB)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[11]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 11); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 12:
        if (likely((values[12] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_left_clipA)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[12]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 12); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 13:
        if (likely((values[13] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_right_clipA)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[13]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 13); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 14:
        if (likely((values[14] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_left_clipB)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[14]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 14); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 15:
        if (likely((values[15] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_right_clipB)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[15]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 15); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 16:
        if (likely((values[16] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_a_qstart)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[16]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 16); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 17:
        if (likely((values[17] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_a_qend)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[17]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 17); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 18:
        if (likely((values[18] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_b_qstart)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[18]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 18); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 19:
        if (likely((values[19] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_b_qend)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[19]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 19); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 20:
        if (likely((values[20] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_a_len)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[20]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 20); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 21:
        if (likely((values[21] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_b_len)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[21]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 21); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 22:
        if (likely((values[22] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_read_overlaps_mate)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[22]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 22); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 23:
        if (likely((values[23] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_read_a)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[23]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 23); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 24:
        if (likely((values[24] = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_read_b)) != 0)) {
          (void)__Pyx_Arg_NewRef_VARARGS(values[24]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        else {
          __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, 24); __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 25:
        if (kw_args > 0) {
          PyObject* value = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_a_node_info);
          if (value) { values[25] = __Pyx_Arg_NewRef_VARARGS(value); kw_args--; }
          else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        }
        CYTHON_FALLTHROUGH;
        case 26:
        if (kw_args > 0) {
          PyObject* value = __Pyx_GetKwValue_VARARGS(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_b_node_info);
          if (value) { values[26] = __Pyx_Arg_NewRef_VARARGS(value); kw_args--; }
          else if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
        }
      }
      if (unlikely(kw_args > 0)) {
        const Py_ssize_t kwd_pos_args = __pyx_nargs;
        if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_kwvalues, __pyx_pyargnames, 0, values + 0, kwd_pos_args, "__cinit__") < 0)) __PYX_ERR(2, 9, __pyx_L3_error)
      }
    } else {
      switch (__pyx_nargs) {
        case 27: values[26] = __Pyx_Arg_VARARGS(__pyx_args, 26);
        CYTHON_FALLTHROUGH;
        case 26: values[25] = __Pyx_Arg_VARARGS(__pyx_args, 25);
        CYTHON_FALLTHROUGH;
        case 25: values[24] = __Pyx_Arg_VARARGS(__pyx_args, 24);
        values[23] = __Pyx_Arg_VARARGS(__pyx_args, 23);
        values[22] = __Pyx_Arg_VARARGS(__pyx_args, 22);
        values[21] = __Pyx_Arg_VARARGS(__pyx_args, 21);
        values[20] = __Pyx_Arg_VARARGS(__pyx_args, 20);
        values[19] = __Pyx_Arg_VARARGS(__pyx_args, 19);
        values[18] = __Pyx_Arg_VARARGS(__pyx_args, 18);
        values[17] = __Pyx_Arg_VARARGS(__pyx_args, 17);
        values[16] = __Pyx_Arg_VARARGS(__pyx_args, 16);
        values[15] = __Pyx_Arg_VARARGS(__pyx_args, 15);
        values[14] = __Pyx_Arg_VARARGS(__pyx_args, 14);
        values[13] = __Pyx_Arg_VARARGS(__pyx_args, 13);
        values[12] = __Pyx_Arg_VARARGS(__pyx_args, 12);
        values[11] = __Pyx_Arg_VARARGS(__pyx_args, 11);
        values[10] = __Pyx_Arg_VARARGS(__pyx_args, 10);
        values[9] = __Pyx_Arg_VARARGS(__pyx_args, 9);
        values[8] = __Pyx_Arg_VARARGS(__pyx_args, 8);
        values[7] = __Pyx_Arg_VARARGS(__pyx_args, 7);
        values[6] = __Pyx_Arg_VARARGS(__pyx_args, 6);
        values[5] = __Pyx_Arg_VARARGS(__pyx_args, 5);
        values[4] = __Pyx_Arg_VARARGS(__pyx_args, 4);
        values[3] = __Pyx_Arg_VARARGS(__pyx_args, 3);
        values[2] = __Pyx_Arg_VARARGS(__pyx_args, 2);
        values[1] = __Pyx_Arg_VARARGS(__pyx_args, 1);
        values[0] = __Pyx_Arg_VARARGS(__pyx_args, 0);
        break;
        default: goto __pyx_L5_argtuple_error;
      }
    }
    __pyx_v_chrA = __Pyx_PyInt_As_int(values[0]); if (unlikely((__pyx_v_chrA == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
    __pyx_v_chrB = __Pyx_PyInt_As_int(values[1]); if (unlikely((__pyx_v_chrB == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
    __pyx_v_priA = __Pyx_PyInt_As_int(values[2]); if (unlikely((__pyx_v_priA == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
    __pyx_v_priB = __Pyx_PyInt_As_int(values[3]); if (unlikely((__pyx_v_priB == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
    __pyx_v_rA = __Pyx_PyInt_As_int(values[4]); if (unlikely((__pyx_v_rA == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
    __pyx_v_rB = __Pyx_PyInt_As_int(values[5]); if (unlikely((__pyx_v_rB == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
    __pyx_v_posA = __Pyx_PyInt_As_int(values[6]); if (unlikely((__pyx_v_posA == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
    __pyx_v_endA = __Pyx_PyInt_As_int(values[7]); if (unlikely((__pyx_v_endA == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
    __pyx_v_posB = __Pyx_PyInt_As_int(values[8]); if (unlikely((__pyx_v_posB == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
    __pyx_v_endB = __Pyx_PyInt_As_int(values[9]); if (unlikely((__pyx_v_endB == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 9, __pyx_L3_error)
    __pyx_v_strandA = __Pyx_PyInt_As_int(values[10]); if (unlikely((__pyx_v_strandA == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 10, __pyx_L3_error)
    __pyx_v_strandB = __Pyx_PyInt_As_int(values[11]); if (unlikely((__pyx_v_strandB == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 10, __pyx_L3_error)
    __pyx_v_left_clipA = __Pyx_PyInt_As_int(values[12]); if (unlikely((__pyx_v_left_clipA == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 10, __pyx_L3_error)
    __pyx_v_right_clipA = __Pyx_PyInt_As_int(values[13]); if (unlikely((__pyx_v_right_clipA == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 10, __pyx_L3_error)
    __pyx_v_left_clipB = __Pyx_PyInt_As_int(values[14]); if (unlikely((__pyx_v_left_clipB == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 10, __pyx_L3_error)
    __pyx_v_right_clipB = __Pyx_PyInt_As_int(values[15]); if (unlikely((__pyx_v_right_clipB == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 10, __pyx_L3_error)
    __pyx_v_a_qstart = __Pyx_PyInt_As_int(values[16]); if (unlikely((__pyx_v_a_qstart == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 11, __pyx_L3_error)
    __pyx_v_a_qend = __Pyx_PyInt_As_int(values[17]); if (unlikely((__pyx_v_a_qend == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 11, __pyx_L3_error)
    __pyx_v_b_qstart = __Pyx_PyInt_As_int(values[18]); if (unlikely((__pyx_v_b_qstart == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 11, __pyx_L3_error)
    __pyx_v_b_qend = __Pyx_PyInt_As_int(values[19]); if (unlikely((__pyx_v_b_qend == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 11, __pyx_L3_error)
    __pyx_v_a_len = __Pyx_PyInt_As_int(values[20]); if (unlikely((__pyx_v_a_len == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 11, __pyx_L3_error)
    __pyx_v_b_len = __Pyx_PyInt_As_int(values[21]); if (unlikely((__pyx_v_b_len == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 11, __pyx_L3_error)
    __pyx_v_read_overlaps_mate = __Pyx_PyInt_As_int(values[22]); if (unlikely((__pyx_v_read_overlaps_mate == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 12, __pyx_L3_error)
    __pyx_v_read_a = values[23];
    __pyx_v_read_b = values[24];
    __pyx_v_a_node_info = values[25];
    __pyx_v_b_node_info = values[26];
  }
  goto __pyx_L6_skip;
  __pyx_L5_argtuple_error:;
  __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 25, 27, __pyx_nargs); __PYX_ERR(2, 9, __pyx_L3_error)
  __pyx_L6_skip:;
  goto __pyx_L4_argument_unpacking_done;
  __pyx_L3_error:;
  {
    Py_ssize_t __pyx_temp;
    for (__pyx_temp=0; __pyx_temp < (Py_ssize_t)(sizeof(values)/sizeof(values[0])); ++__pyx_temp) {
      __Pyx_Arg_XDECREF_VARARGS(values[__pyx_temp]);
    }
  }
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.__cinit__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __Pyx_RefNannyFinishContext();
  return -1;
  __pyx_L4_argument_unpacking_done:;
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem___cinit__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), __pyx_v_chrA, __pyx_v_chrB, __pyx_v_priA, __pyx_v_priB, __pyx_v_rA, __pyx_v_rB, __pyx_v_posA, __pyx_v_endA, __pyx_v_posB, __pyx_v_endB, __pyx_v_strandA, __pyx_v_strandB, __pyx_v_left_clipA, __pyx_v_right_clipA, __pyx_v_left_clipB, __pyx_v_right_clipB, __pyx_v_a_qstart, __pyx_v_a_qend, __pyx_v_b_qstart, __pyx_v_b_qend, __pyx_v_a_len, __pyx_v_b_len, __pyx_v_read_overlaps_mate, __pyx_v_read_a, __pyx_v_read_b, __pyx_v_a_node_info, __pyx_v_b_node_info);

  /* "dysgu/sv_category.pyx":9
 * cdef class AlignmentItem:
 *     """Data holder for classifying alignments into SV types"""
 *     def __cinit__(self, int chrA, int chrB, int priA, int priB, int rA, int rB, int posA, int endA, int posB, int endB,             # <<<<<<<<<<<<<<
 *                   int strandA, int strandB, int left_clipA, int right_clipA, int left_clipB, int right_clipB,
 *                   int a_qstart, int a_qend, int b_qstart, int b_qend, int a_len, int b_len,
 */

  /* function exit code */
  {
    Py_ssize_t __pyx_temp;
    for (__pyx_temp=0; __pyx_temp < (Py_ssize_t)(sizeof(values)/sizeof(values[0])); ++__pyx_temp) {
      __Pyx_Arg_XDECREF_VARARGS(values[__pyx_temp]);
    }
  }
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem___cinit__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, int __pyx_v_chrA, int __pyx_v_chrB, int __pyx_v_priA, int __pyx_v_priB, int __pyx_v_rA, int __pyx_v_rB, int __pyx_v_posA, int __pyx_v_endA, int __pyx_v_posB, int __pyx_v_endB, int __pyx_v_strandA, int __pyx_v_strandB, int __pyx_v_left_clipA, int __pyx_v_right_clipA, int __pyx_v_left_clipB, int __pyx_v_right_clipB, int __pyx_v_a_qstart, int __pyx_v_a_qend, int __pyx_v_b_qstart, int __pyx_v_b_qend, int __pyx_v_a_len, int __pyx_v_b_len, int __pyx_v_read_overlaps_mate, PyObject *__pyx_v_read_a, PyObject *__pyx_v_read_b, PyObject *__pyx_v_a_node_info, PyObject *__pyx_v_b_node_info) {
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__cinit__", 1);

  /* "dysgu/sv_category.pyx":13
 *                   int a_qstart, int a_qend, int b_qstart, int b_qend, int a_len, int b_len,
 *                   int read_overlaps_mate, read_a, read_b, a_node_info=None, b_node_info=None):
 *         self.chrA = chrA             # <<<<<<<<<<<<<<
 *         self.chrB = chrB
 *         self.priA = priA
 */
  __pyx_v_self->chrA = __pyx_v_chrA;

  /* "dysgu/sv_category.pyx":14
 *                   int read_overlaps_mate, read_a, read_b, a_node_info=None, b_node_info=None):
 *         self.chrA = chrA
 *         self.chrB = chrB             # <<<<<<<<<<<<<<
 *         self.priA = priA
 *         self.priB = priB
 */
  __pyx_v_self->chrB = __pyx_v_chrB;

  /* "dysgu/sv_category.pyx":15
 *         self.chrA = chrA
 *         self.chrB = chrB
 *         self.priA = priA             # <<<<<<<<<<<<<<
 *         self.priB = priB
 *         self.rA = rA
 */
  __pyx_v_self->priA = __pyx_v_priA;

  /* "dysgu/sv_category.pyx":16
 *         self.chrB = chrB
 *         self.priA = priA
 *         self.priB = priB             # <<<<<<<<<<<<<<
 *         self.rA = rA
 *         self.rB = rB
 */
  __pyx_v_self->priB = __pyx_v_priB;

  /* "dysgu/sv_category.pyx":17
 *         self.priA = priA
 *         self.priB = priB
 *         self.rA = rA             # <<<<<<<<<<<<<<
 *         self.rB = rB
 *         self.posA = posA
 */
  __pyx_v_self->rA = __pyx_v_rA;

  /* "dysgu/sv_category.pyx":18
 *         self.priB = priB
 *         self.rA = rA
 *         self.rB = rB             # <<<<<<<<<<<<<<
 *         self.posA = posA
 *         self.endA = endA
 */
  __pyx_v_self->rB = __pyx_v_rB;

  /* "dysgu/sv_category.pyx":19
 *         self.rA = rA
 *         self.rB = rB
 *         self.posA = posA             # <<<<<<<<<<<<<<
 *         self.endA = endA
 *         self.posB = posB
 */
  __pyx_v_self->posA = __pyx_v_posA;

  /* "dysgu/sv_category.pyx":20
 *         self.rB = rB
 *         self.posA = posA
 *         self.endA = endA             # <<<<<<<<<<<<<<
 *         self.posB = posB
 *         self.endB = endB
 */
  __pyx_v_self->endA = __pyx_v_endA;

  /* "dysgu/sv_category.pyx":21
 *         self.posA = posA
 *         self.endA = endA
 *         self.posB = posB             # <<<<<<<<<<<<<<
 *         self.endB = endB
 *         self.strandA = strandA
 */
  __pyx_v_self->posB = __pyx_v_posB;

  /* "dysgu/sv_category.pyx":22
 *         self.endA = endA
 *         self.posB = posB
 *         self.endB = endB             # <<<<<<<<<<<<<<
 *         self.strandA = strandA
 *         self.strandB = strandB
 */
  __pyx_v_self->endB = __pyx_v_endB;

  /* "dysgu/sv_category.pyx":23
 *         self.posB = posB
 *         self.endB = endB
 *         self.strandA = strandA             # <<<<<<<<<<<<<<
 *         self.strandB = strandB
 *         self.left_clipA = left_clipA
 */
  __pyx_v_self->strandA = __pyx_v_strandA;

  /* "dysgu/sv_category.pyx":24
 *         self.endB = endB
 *         self.strandA = strandA
 *         self.strandB = strandB             # <<<<<<<<<<<<<<
 *         self.left_clipA = left_clipA
 *         self.right_clipA = right_clipA
 */
  __pyx_v_self->strandB = __pyx_v_strandB;

  /* "dysgu/sv_category.pyx":25
 *         self.strandA = strandA
 *         self.strandB = strandB
 *         self.left_clipA = left_clipA             # <<<<<<<<<<<<<<
 *         self.right_clipA = right_clipA
 *         self.left_clipB = left_clipB
 */
  __pyx_v_self->left_clipA = __pyx_v_left_clipA;

  /* "dysgu/sv_category.pyx":26
 *         self.strandB = strandB
 *         self.left_clipA = left_clipA
 *         self.right_clipA = right_clipA             # <<<<<<<<<<<<<<
 *         self.left_clipB = left_clipB
 *         self.right_clipB = right_clipB
 */
  __pyx_v_self->right_clipA = __pyx_v_right_clipA;

  /* "dysgu/sv_category.pyx":27
 *         self.left_clipA = left_clipA
 *         self.right_clipA = right_clipA
 *         self.left_clipB = left_clipB             # <<<<<<<<<<<<<<
 *         self.right_clipB = right_clipB
 *         self.a_qstart = a_qstart
 */
  __pyx_v_self->left_clipB = __pyx_v_left_clipB;

  /* "dysgu/sv_category.pyx":28
 *         self.right_clipA = right_clipA
 *         self.left_clipB = left_clipB
 *         self.right_clipB = right_clipB             # <<<<<<<<<<<<<<
 *         self.a_qstart = a_qstart
 *         self.a_qend = a_qend
 */
  __pyx_v_self->right_clipB = __pyx_v_right_clipB;

  /* "dysgu/sv_category.pyx":29
 *         self.left_clipB = left_clipB
 *         self.right_clipB = right_clipB
 *         self.a_qstart = a_qstart             # <<<<<<<<<<<<<<
 *         self.a_qend = a_qend
 *         self.b_qstart = b_qstart
 */
  __pyx_v_self->a_qstart = __pyx_v_a_qstart;

  /* "dysgu/sv_category.pyx":30
 *         self.right_clipB = right_clipB
 *         self.a_qstart = a_qstart
 *         self.a_qend = a_qend             # <<<<<<<<<<<<<<
 *         self.b_qstart = b_qstart
 *         self.b_qend = b_qend
 */
  __pyx_v_self->a_qend = __pyx_v_a_qend;

  /* "dysgu/sv_category.pyx":31
 *         self.a_qstart = a_qstart
 *         self.a_qend = a_qend
 *         self.b_qstart = b_qstart             # <<<<<<<<<<<<<<
 *         self.b_qend = b_qend
 *         self.a_len = a_len
 */
  __pyx_v_self->b_qstart = __pyx_v_b_qstart;

  /* "dysgu/sv_category.pyx":32
 *         self.a_qend = a_qend
 *         self.b_qstart = b_qstart
 *         self.b_qend = b_qend             # <<<<<<<<<<<<<<
 *         self.a_len = a_len
 *         self.b_len = b_len
 */
  __pyx_v_self->b_qend = __pyx_v_b_qend;

  /* "dysgu/sv_category.pyx":33
 *         self.b_qstart = b_qstart
 *         self.b_qend = b_qend
 *         self.a_len = a_len             # <<<<<<<<<<<<<<
 *         self.b_len = b_len
 *         self.read_overlaps_mate = read_overlaps_mate
 */
  __pyx_v_self->a_len = __pyx_v_a_len;

  /* "dysgu/sv_category.pyx":34
 *         self.b_qend = b_qend
 *         self.a_len = a_len
 *         self.b_len = b_len             # <<<<<<<<<<<<<<
 *         self.read_overlaps_mate = read_overlaps_mate
 *         self.read_a = read_a
 */
  __pyx_v_self->b_len = __pyx_v_b_len;

  /* "dysgu/sv_category.pyx":35
 *         self.a_len = a_len
 *         self.b_len = b_len
 *         self.read_overlaps_mate = read_overlaps_mate             # <<<<<<<<<<<<<<
 *         self.read_a = read_a
 *         self.read_b = read_b
 */
  __pyx_v_self->read_overlaps_mate = __pyx_v_read_overlaps_mate;

  /* "dysgu/sv_category.pyx":36
 *         self.b_len = b_len
 *         self.read_overlaps_mate = read_overlaps_mate
 *         self.read_a = read_a             # <<<<<<<<<<<<<<
 *         self.read_b = read_b
 *         self.a_node_info = a_node_info
 */
  __Pyx_INCREF(__pyx_v_read_a);
  __Pyx_GIVEREF(__pyx_v_read_a);
  __Pyx_GOTREF(__pyx_v_self->read_a);
  __Pyx_DECREF(__pyx_v_self->read_a);
  __pyx_v_self->read_a = __pyx_v_read_a;

  /* "dysgu/sv_category.pyx":37
 *         self.read_overlaps_mate = read_overlaps_mate
 *         self.read_a = read_a
 *         self.read_b = read_b             # <<<<<<<<<<<<<<
 *         self.a_node_info = a_node_info
 *         self.b_node_info = b_node_info
 */
  __Pyx_INCREF(__pyx_v_read_b);
  __Pyx_GIVEREF(__pyx_v_read_b);
  __Pyx_GOTREF(__pyx_v_self->read_b);
  __Pyx_DECREF(__pyx_v_self->read_b);
  __pyx_v_self->read_b = __pyx_v_read_b;

  /* "dysgu/sv_category.pyx":38
 *         self.read_a = read_a
 *         self.read_b = read_b
 *         self.a_node_info = a_node_info             # <<<<<<<<<<<<<<
 *         self.b_node_info = b_node_info
 *         # These will be determined
 */
  __Pyx_INCREF(__pyx_v_a_node_info);
  __Pyx_GIVEREF(__pyx_v_a_node_info);
  __Pyx_GOTREF(__pyx_v_self->a_node_info);
  __Pyx_DECREF(__pyx_v_self->a_node_info);
  __pyx_v_self->a_node_info = __pyx_v_a_node_info;

  /* "dysgu/sv_category.pyx":39
 *         self.read_b = read_b
 *         self.a_node_info = a_node_info
 *         self.b_node_info = b_node_info             # <<<<<<<<<<<<<<
 *         # These will be determined
 *         self.breakA_precise = 0
 */
  __Pyx_INCREF(__pyx_v_b_node_info);
  __Pyx_GIVEREF(__pyx_v_b_node_info);
  __Pyx_GOTREF(__pyx_v_self->b_node_info);
  __Pyx_DECREF(__pyx_v_self->b_node_info);
  __pyx_v_self->b_node_info = __pyx_v_b_node_info;

  /* "dysgu/sv_category.pyx":41
 *         self.b_node_info = b_node_info
 *         # These will be determined
 *         self.breakA_precise = 0             # <<<<<<<<<<<<<<
 *         self.breakB_precise = 0
 *         self.breakA = -1
 */
  __pyx_v_self->breakA_precise = 0;

  /* "dysgu/sv_category.pyx":42
 *         # These will be determined
 *         self.breakA_precise = 0
 *         self.breakB_precise = 0             # <<<<<<<<<<<<<<
 *         self.breakA = -1
 *         self.breakB = -1
 */
  __pyx_v_self->breakB_precise = 0;

  /* "dysgu/sv_category.pyx":43
 *         self.breakA_precise = 0
 *         self.breakB_precise = 0
 *         self.breakA = -1             # <<<<<<<<<<<<<<
 *         self.breakB = -1
 *         self.svtype = ""
 */
  __pyx_v_self->breakA = -1;

  /* "dysgu/sv_category.pyx":44
 *         self.breakB_precise = 0
 *         self.breakA = -1
 *         self.breakB = -1             # <<<<<<<<<<<<<<
 *         self.svtype = ""
 *         self.join_type = ""
 */
  __pyx_v_self->breakB = -1;

  /* "dysgu/sv_category.pyx":45
 *         self.breakA = -1
 *         self.breakB = -1
 *         self.svtype = ""             # <<<<<<<<<<<<<<
 *         self.join_type = ""
 *         self.query_gap = 0
 */
  __Pyx_INCREF(__pyx_kp_u__3);
  __Pyx_GIVEREF(__pyx_kp_u__3);
  __Pyx_GOTREF(__pyx_v_self->svtype);
  __Pyx_DECREF(__pyx_v_self->svtype);
  __pyx_v_self->svtype = __pyx_kp_u__3;

  /* "dysgu/sv_category.pyx":46
 *         self.breakB = -1
 *         self.svtype = ""
 *         self.join_type = ""             # <<<<<<<<<<<<<<
 *         self.query_gap = 0
 *         self.inferred_sv_len = -1
 */
  __Pyx_INCREF(__pyx_kp_u__3);
  __Pyx_GIVEREF(__pyx_kp_u__3);
  __Pyx_GOTREF(__pyx_v_self->join_type);
  __Pyx_DECREF(__pyx_v_self->join_type);
  __pyx_v_self->join_type = __pyx_kp_u__3;

  /* "dysgu/sv_category.pyx":47
 *         self.svtype = ""
 *         self.join_type = ""
 *         self.query_gap = 0             # <<<<<<<<<<<<<<
 *         self.inferred_sv_len = -1
 *         self.size_inferred = 0  # set to 1 if insertion size was inferred
 */
  __pyx_v_self->query_gap = 0;

  /* "dysgu/sv_category.pyx":48
 *         self.join_type = ""
 *         self.query_gap = 0
 *         self.inferred_sv_len = -1             # <<<<<<<<<<<<<<
 *         self.size_inferred = 0  # set to 1 if insertion size was inferred
 * 
 */
  __pyx_v_self->inferred_sv_len = -1;

  /* "dysgu/sv_category.pyx":49
 *         self.query_gap = 0
 *         self.inferred_sv_len = -1
 *         self.size_inferred = 0  # set to 1 if insertion size was inferred             # <<<<<<<<<<<<<<
 * 
 * # cdef void from_node_info(AlignmentItem v):
 */
  __pyx_v_self->size_inferred = 0;

  /* "dysgu/sv_category.pyx":9
 * cdef class AlignmentItem:
 *     """Data holder for classifying alignments into SV types"""
 *     def __cinit__(self, int chrA, int chrB, int priA, int priB, int rA, int rB, int posA, int endA, int posB, int endB,             # <<<<<<<<<<<<<<
 *                   int strandA, int strandB, int left_clipA, int right_clipA, int left_clipB, int right_clipB,
 *                   int a_qstart, int a_qend, int b_qstart, int b_qend, int a_len, int b_len,
 */

  /* function exit code */
  __pyx_r = 0;
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "dysgu/sv_category.pxd":5
 * cdef class AlignmentItem:
 *     """Data holder for classifying alignments into SV types"""
 *     cdef public int chrA, chrB, priA, priB, rA, rB, posA, endA, posB, endB, strandA, strandB, left_clipA, right_clipA,\             # <<<<<<<<<<<<<<
 *         left_clipB, right_clipB, breakA_precise, breakB_precise, breakA, breakB, a_qstart, a_qend, b_qstart, b_qend,\
 *         a_len, b_len, query_gap, read_overlaps_mate, size_inferred, query_overlap, inferred_sv_len
 */

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_4chrA_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_4chrA_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4chrA___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4chrA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->chrA); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 5, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.chrA.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4chrA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4chrA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4chrA_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4chrA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 5, __pyx_L1_error)
  __pyx_v_self->chrA = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.chrA.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_4chrB_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_4chrB_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4chrB___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4chrB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->chrB); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 5, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.chrB.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4chrB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4chrB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4chrB_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4chrB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 5, __pyx_L1_error)
  __pyx_v_self->chrB = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.chrB.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_4priA_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_4priA_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4priA___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4priA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->priA); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 5, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.priA.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4priA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4priA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4priA_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4priA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 5, __pyx_L1_error)
  __pyx_v_self->priA = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.priA.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_4priB_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_4priB_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4priB___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4priB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->priB); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 5, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.priB.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4priB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4priB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4priB_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4priB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 5, __pyx_L1_error)
  __pyx_v_self->priB = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.priB.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_2rA_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_2rA_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_2rA___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_2rA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->rA); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 5, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.rA.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_2rA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_2rA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_2rA_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_2rA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 5, __pyx_L1_error)
  __pyx_v_self->rA = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.rA.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_2rB_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_2rB_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_2rB___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_2rB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->rB); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 5, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.rB.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_2rB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_2rB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_2rB_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_2rB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 5, __pyx_L1_error)
  __pyx_v_self->rB = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.rB.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_4posA_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_4posA_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4posA___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4posA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->posA); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 5, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.posA.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4posA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4posA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4posA_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4posA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 5, __pyx_L1_error)
  __pyx_v_self->posA = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.posA.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_4endA_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_4endA_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4endA___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4endA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->endA); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 5, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.endA.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4endA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4endA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4endA_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4endA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 5, __pyx_L1_error)
  __pyx_v_self->endA = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.endA.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_4posB_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_4posB_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4posB___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4posB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->posB); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 5, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.posB.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4posB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4posB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4posB_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4posB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 5, __pyx_L1_error)
  __pyx_v_self->posB = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.posB.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_4endB_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_4endB_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4endB___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4endB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->endB); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 5, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.endB.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4endB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4endB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4endB_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4endB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 5, __pyx_L1_error)
  __pyx_v_self->endB = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.endB.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_7strandA_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_7strandA_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_7strandA___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_7strandA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->strandA); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 5, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.strandA.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_7strandA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_7strandA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_7strandA_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_7strandA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 5, __pyx_L1_error)
  __pyx_v_self->strandA = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.strandA.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_7strandB_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_7strandB_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_7strandB___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_7strandB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->strandB); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 5, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.strandB.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_7strandB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_7strandB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_7strandB_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_7strandB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 5, __pyx_L1_error)
  __pyx_v_self->strandB = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.strandB.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_10left_clipA_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_10left_clipA_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_10left_clipA___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_10left_clipA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->left_clipA); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 5, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.left_clipA.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_10left_clipA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_10left_clipA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_10left_clipA_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_10left_clipA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 5, __pyx_L1_error)
  __pyx_v_self->left_clipA = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.left_clipA.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_11right_clipA_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_11right_clipA_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11right_clipA___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_11right_clipA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->right_clipA); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 5, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.right_clipA.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11right_clipA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11right_clipA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11right_clipA_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11right_clipA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 5, __pyx_L1_error)
  __pyx_v_self->right_clipA = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.right_clipA.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* "dysgu/sv_category.pxd":6
 *     """Data holder for classifying alignments into SV types"""
 *     cdef public int chrA, chrB, priA, priB, rA, rB, posA, endA, posB, endB, strandA, strandB, left_clipA, right_clipA,\
 *         left_clipB, right_clipB, breakA_precise, breakB_precise, breakA, breakB, a_qstart, a_qend, b_qstart, b_qend,\             # <<<<<<<<<<<<<<
 *         a_len, b_len, query_gap, read_overlaps_mate, size_inferred, query_overlap, inferred_sv_len
 *     cdef public str svtype, join_type
 */

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_10left_clipB_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_10left_clipB_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_10left_clipB___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_10left_clipB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->left_clipB); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 6, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.left_clipB.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_10left_clipB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_10left_clipB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_10left_clipB_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_10left_clipB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 6, __pyx_L1_error)
  __pyx_v_self->left_clipB = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.left_clipB.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_11right_clipB_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_11right_clipB_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11right_clipB___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_11right_clipB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->right_clipB); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 6, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.right_clipB.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11right_clipB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11right_clipB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11right_clipB_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11right_clipB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 6, __pyx_L1_error)
  __pyx_v_self->right_clipB = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.right_clipB.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_14breakA_precise_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_14breakA_precise_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_14breakA_precise___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_14breakA_precise___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->breakA_precise); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 6, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.breakA_precise.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_14breakA_precise_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_14breakA_precise_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_14breakA_precise_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_14breakA_precise_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 6, __pyx_L1_error)
  __pyx_v_self->breakA_precise = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.breakA_precise.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_14breakB_precise_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_14breakB_precise_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_14breakB_precise___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_14breakB_precise___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->breakB_precise); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 6, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.breakB_precise.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_14breakB_precise_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_14breakB_precise_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_14breakB_precise_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_14breakB_precise_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 6, __pyx_L1_error)
  __pyx_v_self->breakB_precise = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.breakB_precise.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_6breakA_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_6breakA_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6breakA___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_6breakA___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->breakA); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 6, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.breakA.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6breakA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6breakA_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6breakA_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6breakA_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 6, __pyx_L1_error)
  __pyx_v_self->breakA = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.breakA.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_6breakB_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_6breakB_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6breakB___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_6breakB___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->breakB); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 6, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.breakB.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6breakB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6breakB_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6breakB_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6breakB_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 6, __pyx_L1_error)
  __pyx_v_self->breakB = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.breakB.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_8a_qstart_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_8a_qstart_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_8a_qstart___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_8a_qstart___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->a_qstart); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 6, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.a_qstart.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_8a_qstart_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_8a_qstart_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_8a_qstart_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_8a_qstart_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 6, __pyx_L1_error)
  __pyx_v_self->a_qstart = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.a_qstart.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_6a_qend_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_6a_qend_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6a_qend___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_6a_qend___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->a_qend); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 6, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.a_qend.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6a_qend_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6a_qend_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6a_qend_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6a_qend_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 6, __pyx_L1_error)
  __pyx_v_self->a_qend = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.a_qend.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_8b_qstart_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_8b_qstart_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_8b_qstart___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_8b_qstart___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->b_qstart); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 6, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.b_qstart.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_8b_qstart_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_8b_qstart_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_8b_qstart_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_8b_qstart_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 6, __pyx_L1_error)
  __pyx_v_self->b_qstart = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.b_qstart.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_6b_qend_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_6b_qend_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6b_qend___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_6b_qend___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->b_qend); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 6, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.b_qend.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6b_qend_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6b_qend_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6b_qend_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6b_qend_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 6, __pyx_L1_error)
  __pyx_v_self->b_qend = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.b_qend.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* "dysgu/sv_category.pxd":7
 *     cdef public int chrA, chrB, priA, priB, rA, rB, posA, endA, posB, endB, strandA, strandB, left_clipA, right_clipA,\
 *         left_clipB, right_clipB, breakA_precise, breakB_precise, breakA, breakB, a_qstart, a_qend, b_qstart, b_qend,\
 *         a_len, b_len, query_gap, read_overlaps_mate, size_inferred, query_overlap, inferred_sv_len             # <<<<<<<<<<<<<<
 *     cdef public str svtype, join_type
 *     cdef public object read_a, read_b
 */

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_5a_len_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_5a_len_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_5a_len___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_5a_len___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->a_len); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 7, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.a_len.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_5a_len_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_5a_len_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_5a_len_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_5a_len_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 7, __pyx_L1_error)
  __pyx_v_self->a_len = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.a_len.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_5b_len_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_5b_len_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_5b_len___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_5b_len___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->b_len); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 7, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.b_len.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_5b_len_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_5b_len_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_5b_len_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_5b_len_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 7, __pyx_L1_error)
  __pyx_v_self->b_len = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.b_len.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_9query_gap_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_9query_gap_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_9query_gap___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_9query_gap___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->query_gap); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 7, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.query_gap.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_9query_gap_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_9query_gap_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_9query_gap_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_9query_gap_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 7, __pyx_L1_error)
  __pyx_v_self->query_gap = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.query_gap.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_18read_overlaps_mate_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_18read_overlaps_mate_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_18read_overlaps_mate___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_18read_overlaps_mate___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->read_overlaps_mate); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 7, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.read_overlaps_mate.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_18read_overlaps_mate_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_18read_overlaps_mate_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_18read_overlaps_mate_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_18read_overlaps_mate_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 7, __pyx_L1_error)
  __pyx_v_self->read_overlaps_mate = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.read_overlaps_mate.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_13size_inferred_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_13size_inferred_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_13size_inferred___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_13size_inferred___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->size_inferred); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 7, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.size_inferred.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_13size_inferred_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_13size_inferred_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_13size_inferred_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_13size_inferred_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 7, __pyx_L1_error)
  __pyx_v_self->size_inferred = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.size_inferred.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_13query_overlap_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_13query_overlap_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_13query_overlap___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_13query_overlap___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->query_overlap); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 7, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.query_overlap.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_13query_overlap_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_13query_overlap_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_13query_overlap_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_13query_overlap_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 7, __pyx_L1_error)
  __pyx_v_self->query_overlap = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.query_overlap.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_15inferred_sv_len_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_15inferred_sv_len_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_15inferred_sv_len___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_15inferred_sv_len___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __pyx_t_1 = __Pyx_PyInt_From_int(__pyx_v_self->inferred_sv_len); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 7, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_r = __pyx_t_1;
  __pyx_t_1 = 0;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.inferred_sv_len.__get__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_15inferred_sv_len_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_15inferred_sv_len_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_15inferred_sv_len_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_15inferred_sv_len_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  int __pyx_t_1;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __pyx_t_1 = __Pyx_PyInt_As_int(__pyx_v_value); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) __PYX_ERR(3, 7, __pyx_L1_error)
  __pyx_v_self->inferred_sv_len = __pyx_t_1;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.inferred_sv_len.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  return __pyx_r;
}

/* "dysgu/sv_category.pxd":8
 *         left_clipB, right_clipB, breakA_precise, breakB_precise, breakA, breakB, a_qstart, a_qend, b_qstart, b_qend,\
 *         a_len, b_len, query_gap, read_overlaps_mate, size_inferred, query_overlap, inferred_sv_len
 *     cdef public str svtype, join_type             # <<<<<<<<<<<<<<
 *     cdef public object read_a, read_b
 *     cdef public object a_node_info, b_node_info
 */

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_6svtype_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_6svtype_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6svtype___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_6svtype___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __Pyx_INCREF(__pyx_v_self->svtype);
  __pyx_r = __pyx_v_self->svtype;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6svtype_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6svtype_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6svtype_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6svtype_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__set__", 1);
  if (!(likely(PyUnicode_CheckExact(__pyx_v_value))||((__pyx_v_value) == Py_None) || __Pyx_RaiseUnexpectedTypeError("unicode", __pyx_v_value))) __PYX_ERR(3, 8, __pyx_L1_error)
  __pyx_t_1 = __pyx_v_value;
  __Pyx_INCREF(__pyx_t_1);
  __Pyx_GIVEREF(__pyx_t_1);
  __Pyx_GOTREF(__pyx_v_self->svtype);
  __Pyx_DECREF(__pyx_v_self->svtype);
  __pyx_v_self->svtype = ((PyObject*)__pyx_t_1);
  __pyx_t_1 = 0;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.svtype.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6svtype_5__del__(PyObject *__pyx_v_self); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6svtype_5__del__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__del__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6svtype_4__del__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6svtype_4__del__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__del__", 1);
  __Pyx_INCREF(Py_None);
  __Pyx_GIVEREF(Py_None);
  __Pyx_GOTREF(__pyx_v_self->svtype);
  __Pyx_DECREF(__pyx_v_self->svtype);
  __pyx_v_self->svtype = ((PyObject*)Py_None);

  /* function exit code */
  __pyx_r = 0;
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_9join_type_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_9join_type_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_9join_type___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_9join_type___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __Pyx_INCREF(__pyx_v_self->join_type);
  __pyx_r = __pyx_v_self->join_type;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_9join_type_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_9join_type_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_9join_type_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_9join_type_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__set__", 1);
  if (!(likely(PyUnicode_CheckExact(__pyx_v_value))||((__pyx_v_value) == Py_None) || __Pyx_RaiseUnexpectedTypeError("unicode", __pyx_v_value))) __PYX_ERR(3, 8, __pyx_L1_error)
  __pyx_t_1 = __pyx_v_value;
  __Pyx_INCREF(__pyx_t_1);
  __Pyx_GIVEREF(__pyx_t_1);
  __Pyx_GOTREF(__pyx_v_self->join_type);
  __Pyx_DECREF(__pyx_v_self->join_type);
  __pyx_v_self->join_type = ((PyObject*)__pyx_t_1);
  __pyx_t_1 = 0;

  /* function exit code */
  __pyx_r = 0;
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.join_type.__set__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = -1;
  __pyx_L0:;
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_9join_type_5__del__(PyObject *__pyx_v_self); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_9join_type_5__del__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__del__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_9join_type_4__del__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_9join_type_4__del__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__del__", 1);
  __Pyx_INCREF(Py_None);
  __Pyx_GIVEREF(Py_None);
  __Pyx_GOTREF(__pyx_v_self->join_type);
  __Pyx_DECREF(__pyx_v_self->join_type);
  __pyx_v_self->join_type = ((PyObject*)Py_None);

  /* function exit code */
  __pyx_r = 0;
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "dysgu/sv_category.pxd":9
 *         a_len, b_len, query_gap, read_overlaps_mate, size_inferred, query_overlap, inferred_sv_len
 *     cdef public str svtype, join_type
 *     cdef public object read_a, read_b             # <<<<<<<<<<<<<<
 *     cdef public object a_node_info, b_node_info
 * 
 */

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_a_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_a_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_a___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_a___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __Pyx_INCREF(__pyx_v_self->read_a);
  __pyx_r = __pyx_v_self->read_a;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_a_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_a_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_a_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_a_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__", 1);
  __Pyx_INCREF(__pyx_v_value);
  __Pyx_GIVEREF(__pyx_v_value);
  __Pyx_GOTREF(__pyx_v_self->read_a);
  __Pyx_DECREF(__pyx_v_self->read_a);
  __pyx_v_self->read_a = __pyx_v_value;

  /* function exit code */
  __pyx_r = 0;
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_a_5__del__(PyObject *__pyx_v_self); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_a_5__del__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__del__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_a_4__del__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_a_4__del__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__del__", 1);
  __Pyx_INCREF(Py_None);
  __Pyx_GIVEREF(Py_None);
  __Pyx_GOTREF(__pyx_v_self->read_a);
  __Pyx_DECREF(__pyx_v_self->read_a);
  __pyx_v_self->read_a = Py_None;

  /* function exit code */
  __pyx_r = 0;
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_b_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_b_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_b___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_b___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __Pyx_INCREF(__pyx_v_self->read_b);
  __pyx_r = __pyx_v_self->read_b;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_b_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_b_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_b_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_b_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__", 1);
  __Pyx_INCREF(__pyx_v_value);
  __Pyx_GIVEREF(__pyx_v_value);
  __Pyx_GOTREF(__pyx_v_self->read_b);
  __Pyx_DECREF(__pyx_v_self->read_b);
  __pyx_v_self->read_b = __pyx_v_value;

  /* function exit code */
  __pyx_r = 0;
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_b_5__del__(PyObject *__pyx_v_self); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_b_5__del__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__del__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_b_4__del__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_6read_b_4__del__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__del__", 1);
  __Pyx_INCREF(Py_None);
  __Pyx_GIVEREF(Py_None);
  __Pyx_GOTREF(__pyx_v_self->read_b);
  __Pyx_DECREF(__pyx_v_self->read_b);
  __pyx_v_self->read_b = Py_None;

  /* function exit code */
  __pyx_r = 0;
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "dysgu/sv_category.pxd":10
 *     cdef public str svtype, join_type
 *     cdef public object read_a, read_b
 *     cdef public object a_node_info, b_node_info             # <<<<<<<<<<<<<<
 * 
 * 
 */

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_11a_node_info_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_11a_node_info_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11a_node_info___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_11a_node_info___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __Pyx_INCREF(__pyx_v_self->a_node_info);
  __pyx_r = __pyx_v_self->a_node_info;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11a_node_info_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11a_node_info_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11a_node_info_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11a_node_info_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__", 1);
  __Pyx_INCREF(__pyx_v_value);
  __Pyx_GIVEREF(__pyx_v_value);
  __Pyx_GOTREF(__pyx_v_self->a_node_info);
  __Pyx_DECREF(__pyx_v_self->a_node_info);
  __pyx_v_self->a_node_info = __pyx_v_value;

  /* function exit code */
  __pyx_r = 0;
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11a_node_info_5__del__(PyObject *__pyx_v_self); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11a_node_info_5__del__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__del__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11a_node_info_4__del__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11a_node_info_4__del__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__del__", 1);
  __Pyx_INCREF(Py_None);
  __Pyx_GIVEREF(Py_None);
  __Pyx_GOTREF(__pyx_v_self->a_node_info);
  __Pyx_DECREF(__pyx_v_self->a_node_info);
  __pyx_v_self->a_node_info = Py_None;

  /* function exit code */
  __pyx_r = 0;
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_11b_node_info_1__get__(PyObject *__pyx_v_self); /*proto*/
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_11b_node_info_1__get__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11b_node_info___get__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_11b_node_info___get__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__get__", 1);
  __Pyx_XDECREF(__pyx_r);
  __Pyx_INCREF(__pyx_v_self->b_node_info);
  __pyx_r = __pyx_v_self->b_node_info;
  goto __pyx_L0;

  /* function exit code */
  __pyx_L0:;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11b_node_info_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11b_node_info_3__set__(PyObject *__pyx_v_self, PyObject *__pyx_v_value) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11b_node_info_2__set__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), ((PyObject *)__pyx_v_value));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11b_node_info_2__set__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, PyObject *__pyx_v_value) {
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__set__", 1);
  __Pyx_INCREF(__pyx_v_value);
  __Pyx_GIVEREF(__pyx_v_value);
  __Pyx_GOTREF(__pyx_v_self->b_node_info);
  __Pyx_DECREF(__pyx_v_self->b_node_info);
  __pyx_v_self->b_node_info = __pyx_v_value;

  /* function exit code */
  __pyx_r = 0;
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* Python wrapper */
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11b_node_info_5__del__(PyObject *__pyx_v_self); /*proto*/
static int __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11b_node_info_5__del__(PyObject *__pyx_v_self) {
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__del__ (wrapper)", 0);
  __pyx_kwvalues = __Pyx_KwValues_VARARGS(__pyx_args, __pyx_nargs);
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11b_node_info_4__del__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static int __pyx_pf_5dysgu_11sv_category_13AlignmentItem_11b_node_info_4__del__(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  int __pyx_r;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__del__", 1);
  __Pyx_INCREF(Py_None);
  __Pyx_GIVEREF(Py_None);
  __Pyx_GOTREF(__pyx_v_self->b_node_info);
  __Pyx_DECREF(__pyx_v_self->b_node_info);
  __pyx_v_self->b_node_info = Py_None;

  /* function exit code */
  __pyx_r = 0;
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "(tree fragment)":1
 * def __reduce_cython__(self):             # <<<<<<<<<<<<<<
 *     raise TypeError, "no default __reduce__ due to non-trivial __cinit__"
 * def __setstate_cython__(self, __pyx_state):
 */

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_3__reduce_cython__(PyObject *__pyx_v_self, 
#if CYTHON_METH_FASTCALL
PyObject *const *__pyx_args, Py_ssize_t __pyx_nargs, PyObject *__pyx_kwds
#else
PyObject *__pyx_args, PyObject *__pyx_kwds
#endif
); /*proto*/
static PyMethodDef __pyx_mdef_5dysgu_11sv_category_13AlignmentItem_3__reduce_cython__ = {"__reduce_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5dysgu_11sv_category_13AlignmentItem_3__reduce_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, 0};
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_3__reduce_cython__(PyObject *__pyx_v_self, 
#if CYTHON_METH_FASTCALL
PyObject *const *__pyx_args, Py_ssize_t __pyx_nargs, PyObject *__pyx_kwds
#else
PyObject *__pyx_args, PyObject *__pyx_kwds
#endif
) {
  #if !CYTHON_METH_FASTCALL
  CYTHON_UNUSED Py_ssize_t __pyx_nargs;
  #endif
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__reduce_cython__ (wrapper)", 0);
  #if !CYTHON_METH_FASTCALL
  #if CYTHON_ASSUME_SAFE_MACROS
  __pyx_nargs = PyTuple_GET_SIZE(__pyx_args);
  #else
  __pyx_nargs = PyTuple_Size(__pyx_args); if (unlikely(__pyx_nargs < 0)) return NULL;
  #endif
  #endif
  __pyx_kwvalues = __Pyx_KwValues_FASTCALL(__pyx_args, __pyx_nargs);
  if (unlikely(__pyx_nargs > 0)) {
    __Pyx_RaiseArgtupleInvalid("__reduce_cython__", 1, 0, 0, __pyx_nargs); return NULL;}
  if (unlikely(__pyx_kwds) && __Pyx_NumKwargs_FASTCALL(__pyx_kwds) && unlikely(!__Pyx_CheckKeywordStrings(__pyx_kwds, "__reduce_cython__", 0))) return NULL;
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_2__reduce_cython__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self));

  /* function exit code */
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_2__reduce_cython__(CYTHON_UNUSED struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__reduce_cython__", 1);

  /* "(tree fragment)":2
 * def __reduce_cython__(self):
 *     raise TypeError, "no default __reduce__ due to non-trivial __cinit__"             # <<<<<<<<<<<<<<
 * def __setstate_cython__(self, __pyx_state):
 *     raise TypeError, "no default __reduce__ due to non-trivial __cinit__"
 */
  __Pyx_Raise(__pyx_builtin_TypeError, __pyx_kp_s_no_default___reduce___due_to_non, 0, 0);
  __PYX_ERR(0, 2, __pyx_L1_error)

  /* "(tree fragment)":1
 * def __reduce_cython__(self):             # <<<<<<<<<<<<<<
 *     raise TypeError, "no default __reduce__ due to non-trivial __cinit__"
 * def __setstate_cython__(self, __pyx_state):
 */

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.__reduce_cython__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "(tree fragment)":3
 * def __reduce_cython__(self):
 *     raise TypeError, "no default __reduce__ due to non-trivial __cinit__"
 * def __setstate_cython__(self, __pyx_state):             # <<<<<<<<<<<<<<
 *     raise TypeError, "no default __reduce__ due to non-trivial __cinit__"
 */

/* Python wrapper */
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_5__setstate_cython__(PyObject *__pyx_v_self, 
#if CYTHON_METH_FASTCALL
PyObject *const *__pyx_args, Py_ssize_t __pyx_nargs, PyObject *__pyx_kwds
#else
PyObject *__pyx_args, PyObject *__pyx_kwds
#endif
); /*proto*/
static PyMethodDef __pyx_mdef_5dysgu_11sv_category_13AlignmentItem_5__setstate_cython__ = {"__setstate_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5dysgu_11sv_category_13AlignmentItem_5__setstate_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, 0};
static PyObject *__pyx_pw_5dysgu_11sv_category_13AlignmentItem_5__setstate_cython__(PyObject *__pyx_v_self, 
#if CYTHON_METH_FASTCALL
PyObject *const *__pyx_args, Py_ssize_t __pyx_nargs, PyObject *__pyx_kwds
#else
PyObject *__pyx_args, PyObject *__pyx_kwds
#endif
) {
  CYTHON_UNUSED PyObject *__pyx_v___pyx_state = 0;
  #if !CYTHON_METH_FASTCALL
  CYTHON_UNUSED Py_ssize_t __pyx_nargs;
  #endif
  CYTHON_UNUSED PyObject *const *__pyx_kwvalues;
  PyObject* values[1] = {0};
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  PyObject *__pyx_r = 0;
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__setstate_cython__ (wrapper)", 0);
  #if !CYTHON_METH_FASTCALL
  #if CYTHON_ASSUME_SAFE_MACROS
  __pyx_nargs = PyTuple_GET_SIZE(__pyx_args);
  #else
  __pyx_nargs = PyTuple_Size(__pyx_args); if (unlikely(__pyx_nargs < 0)) return NULL;
  #endif
  #endif
  __pyx_kwvalues = __Pyx_KwValues_FASTCALL(__pyx_args, __pyx_nargs);
  {
    PyObject **__pyx_pyargnames[] = {&__pyx_n_s_pyx_state,0};
    if (__pyx_kwds) {
      Py_ssize_t kw_args;
      switch (__pyx_nargs) {
        case  1: values[0] = __Pyx_Arg_FASTCALL(__pyx_args, 0);
        CYTHON_FALLTHROUGH;
        case  0: break;
        default: goto __pyx_L5_argtuple_error;
      }
      kw_args = __Pyx_NumKwargs_FASTCALL(__pyx_kwds);
      switch (__pyx_nargs) {
        case  0:
        if (likely((values[0] = __Pyx_GetKwValue_FASTCALL(__pyx_kwds, __pyx_kwvalues, __pyx_n_s_pyx_state)) != 0)) {
          (void)__Pyx_Arg_NewRef_FASTCALL(values[0]);
          kw_args--;
        }
        else if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 3, __pyx_L3_error)
        else goto __pyx_L5_argtuple_error;
      }
      if (unlikely(kw_args > 0)) {
        const Py_ssize_t kwd_pos_args = __pyx_nargs;
        if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_kwvalues, __pyx_pyargnames, 0, values + 0, kwd_pos_args, "__setstate_cython__") < 0)) __PYX_ERR(0, 3, __pyx_L3_error)
      }
    } else if (unlikely(__pyx_nargs != 1)) {
      goto __pyx_L5_argtuple_error;
    } else {
      values[0] = __Pyx_Arg_FASTCALL(__pyx_args, 0);
    }
    __pyx_v___pyx_state = values[0];
  }
  goto __pyx_L6_skip;
  __pyx_L5_argtuple_error:;
  __Pyx_RaiseArgtupleInvalid("__setstate_cython__", 1, 1, 1, __pyx_nargs); __PYX_ERR(0, 3, __pyx_L3_error)
  __pyx_L6_skip:;
  goto __pyx_L4_argument_unpacking_done;
  __pyx_L3_error:;
  {
    Py_ssize_t __pyx_temp;
    for (__pyx_temp=0; __pyx_temp < (Py_ssize_t)(sizeof(values)/sizeof(values[0])); ++__pyx_temp) {
      __Pyx_Arg_XDECREF_FASTCALL(values[__pyx_temp]);
    }
  }
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.__setstate_cython__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __Pyx_RefNannyFinishContext();
  return NULL;
  __pyx_L4_argument_unpacking_done:;
  __pyx_r = __pyx_pf_5dysgu_11sv_category_13AlignmentItem_4__setstate_cython__(((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)__pyx_v_self), __pyx_v___pyx_state);

  /* function exit code */
  {
    Py_ssize_t __pyx_temp;
    for (__pyx_temp=0; __pyx_temp < (Py_ssize_t)(sizeof(values)/sizeof(values[0])); ++__pyx_temp) {
      __Pyx_Arg_XDECREF_FASTCALL(values[__pyx_temp]);
    }
  }
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

static PyObject *__pyx_pf_5dysgu_11sv_category_13AlignmentItem_4__setstate_cython__(CYTHON_UNUSED struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v___pyx_state) {
  PyObject *__pyx_r = NULL;
  __Pyx_RefNannyDeclarations
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__setstate_cython__", 1);

  /* "(tree fragment)":4
 *     raise TypeError, "no default __reduce__ due to non-trivial __cinit__"
 * def __setstate_cython__(self, __pyx_state):
 *     raise TypeError, "no default __reduce__ due to non-trivial __cinit__"             # <<<<<<<<<<<<<<
 */
  __Pyx_Raise(__pyx_builtin_TypeError, __pyx_kp_s_no_default___reduce___due_to_non, 0, 0);
  __PYX_ERR(0, 4, __pyx_L1_error)

  /* "(tree fragment)":3
 * def __reduce_cython__(self):
 *     raise TypeError, "no default __reduce__ due to non-trivial __cinit__"
 * def __setstate_cython__(self, __pyx_state):             # <<<<<<<<<<<<<<
 *     raise TypeError, "no default __reduce__ due to non-trivial __cinit__"
 */

  /* function exit code */
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.AlignmentItem.__setstate_cython__", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_r = NULL;
  __Pyx_XGIVEREF(__pyx_r);
  __Pyx_RefNannyFinishContext();
  return __pyx_r;
}

/* "dysgu/sv_category.pyx":102
 * #                     v.svtype = "DEL"
 * 
 * cdef void two_primary(AlignmentItem v):             # <<<<<<<<<<<<<<
 * 
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA < v.endB):
 */

static void __pyx_f_5dysgu_11sv_category_two_primary(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_v) {
  __Pyx_RefNannyDeclarations
  int __pyx_t_1;
  int __pyx_t_2;
  int __pyx_t_3;
  int __pyx_t_4;
  __Pyx_RefNannySetupContext("two_primary", 1);

  /* "dysgu/sv_category.pyx":104
 * cdef void two_primary(AlignmentItem v):
 * 
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA < v.endB):             # <<<<<<<<<<<<<<
 * 
 *         if v.strandA == 3 and v.strandB == 5:  # DEL type
 */
  __pyx_t_2 = (__pyx_v_v->posA < __pyx_v_v->posB);
  if (!__pyx_t_2) {
  } else {
    __pyx_t_1 = __pyx_t_2;
    goto __pyx_L4_bool_binop_done;
  }
  __pyx_t_2 = (__pyx_v_v->posA == __pyx_v_v->posB);
  if (__pyx_t_2) {
  } else {
    __pyx_t_1 = __pyx_t_2;
    goto __pyx_L4_bool_binop_done;
  }
  __pyx_t_2 = (__pyx_v_v->endA < __pyx_v_v->endB);
  __pyx_t_1 = __pyx_t_2;
  __pyx_L4_bool_binop_done:;
  if (__pyx_t_1) {

    /* "dysgu/sv_category.pyx":106
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA < v.endB):
 * 
 *         if v.strandA == 3 and v.strandB == 5:  # DEL type             # <<<<<<<<<<<<<<
 *             v.breakA = v.endA
 *             if v.right_clipA:
 */
    __pyx_t_2 = (__pyx_v_v->strandA == 3);
    if (__pyx_t_2) {
    } else {
      __pyx_t_1 = __pyx_t_2;
      goto __pyx_L8_bool_binop_done;
    }
    __pyx_t_2 = (__pyx_v_v->strandB == 5);
    __pyx_t_1 = __pyx_t_2;
    __pyx_L8_bool_binop_done:;
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":107
 * 
 *         if v.strandA == 3 and v.strandB == 5:  # DEL type
 *             v.breakA = v.endA             # <<<<<<<<<<<<<<
 *             if v.right_clipA:
 *                 v.breakA_precise = 1
 */
      __pyx_t_3 = __pyx_v_v->endA;
      __pyx_v_v->breakA = __pyx_t_3;

      /* "dysgu/sv_category.pyx":108
 *         if v.strandA == 3 and v.strandB == 5:  # DEL type
 *             v.breakA = v.endA
 *             if v.right_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 * 
 */
      __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":109
 *             v.breakA = v.endA
 *             if v.right_clipA:
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *             v.breakB = v.posB
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":108
 *         if v.strandA == 3 and v.strandB == 5:  # DEL type
 *             v.breakA = v.endA
 *             if v.right_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 * 
 */
      }

      /* "dysgu/sv_category.pyx":111
 *                 v.breakA_precise = 1
 * 
 *             v.breakB = v.posB             # <<<<<<<<<<<<<<
 *             if v.left_clipB:
 *                 v.breakB_precise = 1
 */
      __pyx_t_3 = __pyx_v_v->posB;
      __pyx_v_v->breakB = __pyx_t_3;

      /* "dysgu/sv_category.pyx":112
 * 
 *             v.breakB = v.posB
 *             if v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
      __pyx_t_1 = (__pyx_v_v->left_clipB != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":113
 *             v.breakB = v.posB
 *             if v.left_clipB:
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *             if v.endA >= v.posB:
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":112
 * 
 *             v.breakB = v.posB
 *             if v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
      }

      /* "dysgu/sv_category.pyx":115
 *                 v.breakB_precise = 1
 * 
 *             if v.endA >= v.posB:             # <<<<<<<<<<<<<<
 *                 v.svtype = "INS"
 *                 v.join_type = "3to5"
 */
      __pyx_t_1 = (__pyx_v_v->endA >= __pyx_v_v->posB);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":116
 * 
 *             if v.endA >= v.posB:
 *                 v.svtype = "INS"             # <<<<<<<<<<<<<<
 *                 v.join_type = "3to5"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INS);
        __Pyx_GIVEREF(__pyx_n_u_INS);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INS;

        /* "dysgu/sv_category.pyx":117
 *             if v.endA >= v.posB:
 *                 v.svtype = "INS"
 *                 v.join_type = "3to5"             # <<<<<<<<<<<<<<
 * 
 *             else:
 */
        __Pyx_INCREF(__pyx_kp_u_3to5);
        __Pyx_GIVEREF(__pyx_kp_u_3to5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_3to5;

        /* "dysgu/sv_category.pyx":115
 *                 v.breakB_precise = 1
 * 
 *             if v.endA >= v.posB:             # <<<<<<<<<<<<<<
 *                 v.svtype = "INS"
 *                 v.join_type = "3to5"
 */
        goto __pyx_L12;
      }

      /* "dysgu/sv_category.pyx":120
 * 
 *             else:
 *                 v.svtype = "DEL"             # <<<<<<<<<<<<<<
 *                 v.join_type = "3to5"
 * 
 */
      /*else*/ {
        __Pyx_INCREF(__pyx_n_u_DEL);
        __Pyx_GIVEREF(__pyx_n_u_DEL);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_DEL;

        /* "dysgu/sv_category.pyx":121
 *             else:
 *                 v.svtype = "DEL"
 *                 v.join_type = "3to5"             # <<<<<<<<<<<<<<
 * 
 *         elif v.strandA == 5 and v.strandB == 3:  # DUP type
 */
        __Pyx_INCREF(__pyx_kp_u_3to5);
        __Pyx_GIVEREF(__pyx_kp_u_3to5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_3to5;
      }
      __pyx_L12:;

      /* "dysgu/sv_category.pyx":106
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA < v.endB):
 * 
 *         if v.strandA == 3 and v.strandB == 5:  # DEL type             # <<<<<<<<<<<<<<
 *             v.breakA = v.endA
 *             if v.right_clipA:
 */
      goto __pyx_L7;
    }

    /* "dysgu/sv_category.pyx":123
 *                 v.join_type = "3to5"
 * 
 *         elif v.strandA == 5 and v.strandB == 3:  # DUP type             # <<<<<<<<<<<<<<
 *             v.breakA = v.posA
 *             if v.left_clipA:
 */
    __pyx_t_2 = (__pyx_v_v->strandA == 5);
    if (__pyx_t_2) {
    } else {
      __pyx_t_1 = __pyx_t_2;
      goto __pyx_L13_bool_binop_done;
    }
    __pyx_t_2 = (__pyx_v_v->strandB == 3);
    __pyx_t_1 = __pyx_t_2;
    __pyx_L13_bool_binop_done:;
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":124
 * 
 *         elif v.strandA == 5 and v.strandB == 3:  # DUP type
 *             v.breakA = v.posA             # <<<<<<<<<<<<<<
 *             if v.left_clipA:
 *                 v.breakA_precise = 1
 */
      __pyx_t_3 = __pyx_v_v->posA;
      __pyx_v_v->breakA = __pyx_t_3;

      /* "dysgu/sv_category.pyx":125
 *         elif v.strandA == 5 and v.strandB == 3:  # DUP type
 *             v.breakA = v.posA
 *             if v.left_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 * 
 */
      __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":126
 *             v.breakA = v.posA
 *             if v.left_clipA:
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *             v.breakB = v.endB
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":125
 *         elif v.strandA == 5 and v.strandB == 3:  # DUP type
 *             v.breakA = v.posA
 *             if v.left_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 * 
 */
      }

      /* "dysgu/sv_category.pyx":128
 *                 v.breakA_precise = 1
 * 
 *             v.breakB = v.endB             # <<<<<<<<<<<<<<
 *             if v.right_clipB:
 *                 v.breakB_precise = 1
 */
      __pyx_t_3 = __pyx_v_v->endB;
      __pyx_v_v->breakB = __pyx_t_3;

      /* "dysgu/sv_category.pyx":129
 * 
 *             v.breakB = v.endB
 *             if v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
      __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":130
 *             v.breakB = v.endB
 *             if v.right_clipB:
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *             v.svtype = "DUP"
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":129
 * 
 *             v.breakB = v.endB
 *             if v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
      }

      /* "dysgu/sv_category.pyx":132
 *                 v.breakB_precise = 1
 * 
 *             v.svtype = "DUP"             # <<<<<<<<<<<<<<
 *             v.join_type = "5to3"
 * 
 */
      __Pyx_INCREF(__pyx_n_u_DUP);
      __Pyx_GIVEREF(__pyx_n_u_DUP);
      __Pyx_GOTREF(__pyx_v_v->svtype);
      __Pyx_DECREF(__pyx_v_v->svtype);
      __pyx_v_v->svtype = __pyx_n_u_DUP;

      /* "dysgu/sv_category.pyx":133
 * 
 *             v.svtype = "DUP"
 *             v.join_type = "5to3"             # <<<<<<<<<<<<<<
 * 
 *         else:  # INV type
 */
      __Pyx_INCREF(__pyx_kp_u_5to3);
      __Pyx_GIVEREF(__pyx_kp_u_5to3);
      __Pyx_GOTREF(__pyx_v_v->join_type);
      __Pyx_DECREF(__pyx_v_v->join_type);
      __pyx_v_v->join_type = __pyx_kp_u_5to3;

      /* "dysgu/sv_category.pyx":123
 *                 v.join_type = "3to5"
 * 
 *         elif v.strandA == 5 and v.strandB == 3:  # DUP type             # <<<<<<<<<<<<<<
 *             v.breakA = v.posA
 *             if v.left_clipA:
 */
      goto __pyx_L7;
    }

    /* "dysgu/sv_category.pyx":137
 *         else:  # INV type
 *             # Break to left or right
 *             if v.strandA == 5:             # <<<<<<<<<<<<<<
 * 
 *                 if not (v.left_clipA or v.left_clipB) and (v.right_clipA or v.right_clipB):
 */
    /*else*/ {
      __pyx_t_1 = (__pyx_v_v->strandA == 5);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":139
 *             if v.strandA == 5:
 * 
 *                 if not (v.left_clipA or v.left_clipB) and (v.right_clipA or v.right_clipB):             # <<<<<<<<<<<<<<
 *                     v.breakA = v.endA
 *                     if v.right_clipA:
 */
        __pyx_t_4 = (__pyx_v_v->left_clipA != 0);
        if (!__pyx_t_4) {
        } else {
          __pyx_t_2 = __pyx_t_4;
          goto __pyx_L21_bool_binop_done;
        }
        __pyx_t_4 = (__pyx_v_v->left_clipB != 0);
        __pyx_t_2 = __pyx_t_4;
        __pyx_L21_bool_binop_done:;
        __pyx_t_4 = (!__pyx_t_2);
        if (__pyx_t_4) {
        } else {
          __pyx_t_1 = __pyx_t_4;
          goto __pyx_L19_bool_binop_done;
        }
        __pyx_t_4 = (__pyx_v_v->right_clipA != 0);
        if (!__pyx_t_4) {
        } else {
          __pyx_t_1 = __pyx_t_4;
          goto __pyx_L19_bool_binop_done;
        }
        __pyx_t_4 = (__pyx_v_v->right_clipB != 0);
        __pyx_t_1 = __pyx_t_4;
        __pyx_L19_bool_binop_done:;
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":140
 * 
 *                 if not (v.left_clipA or v.left_clipB) and (v.right_clipA or v.right_clipB):
 *                     v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                     if v.right_clipA:
 *                         v.breakA_precise = 1
 */
          __pyx_t_3 = __pyx_v_v->endA;
          __pyx_v_v->breakA = __pyx_t_3;

          /* "dysgu/sv_category.pyx":141
 *                 if not (v.left_clipA or v.left_clipB) and (v.right_clipA or v.right_clipB):
 *                     v.breakA = v.endA
 *                     if v.right_clipA:             # <<<<<<<<<<<<<<
 *                         v.breakA_precise = 1
 * 
 */
          __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
          if (__pyx_t_1) {

            /* "dysgu/sv_category.pyx":142
 *                     v.breakA = v.endA
 *                     if v.right_clipA:
 *                         v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                     v.breakB = v.endB
 */
            __pyx_v_v->breakA_precise = 1;

            /* "dysgu/sv_category.pyx":141
 *                 if not (v.left_clipA or v.left_clipB) and (v.right_clipA or v.right_clipB):
 *                     v.breakA = v.endA
 *                     if v.right_clipA:             # <<<<<<<<<<<<<<
 *                         v.breakA_precise = 1
 * 
 */
          }

          /* "dysgu/sv_category.pyx":144
 *                         v.breakA_precise = 1
 * 
 *                     v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                     if v.right_clipB:
 *                         v.breakB_precise = 1
 */
          __pyx_t_3 = __pyx_v_v->endB;
          __pyx_v_v->breakB = __pyx_t_3;

          /* "dysgu/sv_category.pyx":145
 * 
 *                     v.breakB = v.endB
 *                     if v.right_clipB:             # <<<<<<<<<<<<<<
 *                         v.breakB_precise = 1
 * 
 */
          __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
          if (__pyx_t_1) {

            /* "dysgu/sv_category.pyx":146
 *                     v.breakB = v.endB
 *                     if v.right_clipB:
 *                         v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                     v.svtype = "INV"
 */
            __pyx_v_v->breakB_precise = 1;

            /* "dysgu/sv_category.pyx":145
 * 
 *                     v.breakB = v.endB
 *                     if v.right_clipB:             # <<<<<<<<<<<<<<
 *                         v.breakB_precise = 1
 * 
 */
          }

          /* "dysgu/sv_category.pyx":148
 *                         v.breakB_precise = 1
 * 
 *                     v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                     v.join_type = "3to3"
 * 
 */
          __Pyx_INCREF(__pyx_n_u_INV);
          __Pyx_GIVEREF(__pyx_n_u_INV);
          __Pyx_GOTREF(__pyx_v_v->svtype);
          __Pyx_DECREF(__pyx_v_v->svtype);
          __pyx_v_v->svtype = __pyx_n_u_INV;

          /* "dysgu/sv_category.pyx":149
 * 
 *                     v.svtype = "INV"
 *                     v.join_type = "3to3"             # <<<<<<<<<<<<<<
 * 
 *                 else:
 */
          __Pyx_INCREF(__pyx_kp_u_3to3);
          __Pyx_GIVEREF(__pyx_kp_u_3to3);
          __Pyx_GOTREF(__pyx_v_v->join_type);
          __Pyx_DECREF(__pyx_v_v->join_type);
          __pyx_v_v->join_type = __pyx_kp_u_3to3;

          /* "dysgu/sv_category.pyx":139
 *             if v.strandA == 5:
 * 
 *                 if not (v.left_clipA or v.left_clipB) and (v.right_clipA or v.right_clipB):             # <<<<<<<<<<<<<<
 *                     v.breakA = v.endA
 *                     if v.right_clipA:
 */
          goto __pyx_L18;
        }

        /* "dysgu/sv_category.pyx":152
 * 
 *                 else:
 *                     v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                     if v.left_clipA:
 *                         v.breakA_precise = 1
 */
        /*else*/ {
          __pyx_t_3 = __pyx_v_v->posA;
          __pyx_v_v->breakA = __pyx_t_3;

          /* "dysgu/sv_category.pyx":153
 *                 else:
 *                     v.breakA = v.posA
 *                     if v.left_clipA:             # <<<<<<<<<<<<<<
 *                         v.breakA_precise = 1
 * 
 */
          __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
          if (__pyx_t_1) {

            /* "dysgu/sv_category.pyx":154
 *                     v.breakA = v.posA
 *                     if v.left_clipA:
 *                         v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                     v.breakB = v.posB
 */
            __pyx_v_v->breakA_precise = 1;

            /* "dysgu/sv_category.pyx":153
 *                 else:
 *                     v.breakA = v.posA
 *                     if v.left_clipA:             # <<<<<<<<<<<<<<
 *                         v.breakA_precise = 1
 * 
 */
          }

          /* "dysgu/sv_category.pyx":156
 *                         v.breakA_precise = 1
 * 
 *                     v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                     if v.right_clipB:
 *                         v.breakB_precise = 1
 */
          __pyx_t_3 = __pyx_v_v->posB;
          __pyx_v_v->breakB = __pyx_t_3;

          /* "dysgu/sv_category.pyx":157
 * 
 *                     v.breakB = v.posB
 *                     if v.right_clipB:             # <<<<<<<<<<<<<<
 *                         v.breakB_precise = 1
 * 
 */
          __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
          if (__pyx_t_1) {

            /* "dysgu/sv_category.pyx":158
 *                     v.breakB = v.posB
 *                     if v.right_clipB:
 *                         v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                     v.svtype = "INV"
 */
            __pyx_v_v->breakB_precise = 1;

            /* "dysgu/sv_category.pyx":157
 * 
 *                     v.breakB = v.posB
 *                     if v.right_clipB:             # <<<<<<<<<<<<<<
 *                         v.breakB_precise = 1
 * 
 */
          }

          /* "dysgu/sv_category.pyx":160
 *                         v.breakB_precise = 1
 * 
 *                     v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                     v.join_type = "5to5"
 * 
 */
          __Pyx_INCREF(__pyx_n_u_INV);
          __Pyx_GIVEREF(__pyx_n_u_INV);
          __Pyx_GOTREF(__pyx_v_v->svtype);
          __Pyx_DECREF(__pyx_v_v->svtype);
          __pyx_v_v->svtype = __pyx_n_u_INV;

          /* "dysgu/sv_category.pyx":161
 * 
 *                     v.svtype = "INV"
 *                     v.join_type = "5to5"             # <<<<<<<<<<<<<<
 * 
 *             else:  # strand == 3
 */
          __Pyx_INCREF(__pyx_kp_u_5to5);
          __Pyx_GIVEREF(__pyx_kp_u_5to5);
          __Pyx_GOTREF(__pyx_v_v->join_type);
          __Pyx_DECREF(__pyx_v_v->join_type);
          __pyx_v_v->join_type = __pyx_kp_u_5to5;
        }
        __pyx_L18:;

        /* "dysgu/sv_category.pyx":137
 *         else:  # INV type
 *             # Break to left or right
 *             if v.strandA == 5:             # <<<<<<<<<<<<<<
 * 
 *                 if not (v.left_clipA or v.left_clipB) and (v.right_clipA or v.right_clipB):
 */
        goto __pyx_L17;
      }

      /* "dysgu/sv_category.pyx":164
 * 
 *             else:  # strand == 3
 *                 if not (v.right_clipA or v.right_clipB) and (v.left_clipA or v.left_clipB):  # only left clips             # <<<<<<<<<<<<<<
 * 
 *                     if (v.posA < v.posB and v.left_clipB) or (v.posB < v.posA and v.left_clipA):  # guess right
 */
      /*else*/ {
        __pyx_t_2 = (__pyx_v_v->right_clipA != 0);
        if (!__pyx_t_2) {
        } else {
          __pyx_t_4 = __pyx_t_2;
          goto __pyx_L31_bool_binop_done;
        }
        __pyx_t_2 = (__pyx_v_v->right_clipB != 0);
        __pyx_t_4 = __pyx_t_2;
        __pyx_L31_bool_binop_done:;
        __pyx_t_2 = (!__pyx_t_4);
        if (__pyx_t_2) {
        } else {
          __pyx_t_1 = __pyx_t_2;
          goto __pyx_L29_bool_binop_done;
        }
        __pyx_t_2 = (__pyx_v_v->left_clipA != 0);
        if (!__pyx_t_2) {
        } else {
          __pyx_t_1 = __pyx_t_2;
          goto __pyx_L29_bool_binop_done;
        }
        __pyx_t_2 = (__pyx_v_v->left_clipB != 0);
        __pyx_t_1 = __pyx_t_2;
        __pyx_L29_bool_binop_done:;
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":166
 *                 if not (v.right_clipA or v.right_clipB) and (v.left_clipA or v.left_clipB):  # only left clips
 * 
 *                     if (v.posA < v.posB and v.left_clipB) or (v.posB < v.posA and v.left_clipA):  # guess right             # <<<<<<<<<<<<<<
 *                         v.breakA = v.endA
 *                         if v.right_clipA:
 */
          __pyx_t_2 = (__pyx_v_v->posA < __pyx_v_v->posB);
          if (!__pyx_t_2) {
            goto __pyx_L36_next_or;
          } else {
          }
          __pyx_t_2 = (__pyx_v_v->left_clipB != 0);
          if (!__pyx_t_2) {
          } else {
            __pyx_t_1 = __pyx_t_2;
            goto __pyx_L35_bool_binop_done;
          }
          __pyx_L36_next_or:;
          __pyx_t_2 = (__pyx_v_v->posB < __pyx_v_v->posA);
          if (__pyx_t_2) {
          } else {
            __pyx_t_1 = __pyx_t_2;
            goto __pyx_L35_bool_binop_done;
          }
          __pyx_t_2 = (__pyx_v_v->left_clipA != 0);
          __pyx_t_1 = __pyx_t_2;
          __pyx_L35_bool_binop_done:;
          if (__pyx_t_1) {

            /* "dysgu/sv_category.pyx":167
 * 
 *                     if (v.posA < v.posB and v.left_clipB) or (v.posB < v.posA and v.left_clipA):  # guess right
 *                         v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                         if v.right_clipA:
 *                             v.breakA_precise = 1
 */
            __pyx_t_3 = __pyx_v_v->endA;
            __pyx_v_v->breakA = __pyx_t_3;

            /* "dysgu/sv_category.pyx":168
 *                     if (v.posA < v.posB and v.left_clipB) or (v.posB < v.posA and v.left_clipA):  # guess right
 *                         v.breakA = v.endA
 *                         if v.right_clipA:             # <<<<<<<<<<<<<<
 *                             v.breakA_precise = 1
 * 
 */
            __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
            if (__pyx_t_1) {

              /* "dysgu/sv_category.pyx":169
 *                         v.breakA = v.endA
 *                         if v.right_clipA:
 *                             v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                         v.breakB = v.endB
 */
              __pyx_v_v->breakA_precise = 1;

              /* "dysgu/sv_category.pyx":168
 *                     if (v.posA < v.posB and v.left_clipB) or (v.posB < v.posA and v.left_clipA):  # guess right
 *                         v.breakA = v.endA
 *                         if v.right_clipA:             # <<<<<<<<<<<<<<
 *                             v.breakA_precise = 1
 * 
 */
            }

            /* "dysgu/sv_category.pyx":171
 *                             v.breakA_precise = 1
 * 
 *                         v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                         if v.right_clipB:
 *                             v.breakB_precise = 1
 */
            __pyx_t_3 = __pyx_v_v->endB;
            __pyx_v_v->breakB = __pyx_t_3;

            /* "dysgu/sv_category.pyx":172
 * 
 *                         v.breakB = v.endB
 *                         if v.right_clipB:             # <<<<<<<<<<<<<<
 *                             v.breakB_precise = 1
 * 
 */
            __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
            if (__pyx_t_1) {

              /* "dysgu/sv_category.pyx":173
 *                         v.breakB = v.endB
 *                         if v.right_clipB:
 *                             v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                         v.svtype = "INV"
 */
              __pyx_v_v->breakB_precise = 1;

              /* "dysgu/sv_category.pyx":172
 * 
 *                         v.breakB = v.endB
 *                         if v.right_clipB:             # <<<<<<<<<<<<<<
 *                             v.breakB_precise = 1
 * 
 */
            }

            /* "dysgu/sv_category.pyx":175
 *                             v.breakB_precise = 1
 * 
 *                         v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                         v.join_type = "3to3"
 * 
 */
            __Pyx_INCREF(__pyx_n_u_INV);
            __Pyx_GIVEREF(__pyx_n_u_INV);
            __Pyx_GOTREF(__pyx_v_v->svtype);
            __Pyx_DECREF(__pyx_v_v->svtype);
            __pyx_v_v->svtype = __pyx_n_u_INV;

            /* "dysgu/sv_category.pyx":176
 * 
 *                         v.svtype = "INV"
 *                         v.join_type = "3to3"             # <<<<<<<<<<<<<<
 * 
 *                     else:  # guess left
 */
            __Pyx_INCREF(__pyx_kp_u_3to3);
            __Pyx_GIVEREF(__pyx_kp_u_3to3);
            __Pyx_GOTREF(__pyx_v_v->join_type);
            __Pyx_DECREF(__pyx_v_v->join_type);
            __pyx_v_v->join_type = __pyx_kp_u_3to3;

            /* "dysgu/sv_category.pyx":166
 *                 if not (v.right_clipA or v.right_clipB) and (v.left_clipA or v.left_clipB):  # only left clips
 * 
 *                     if (v.posA < v.posB and v.left_clipB) or (v.posB < v.posA and v.left_clipA):  # guess right             # <<<<<<<<<<<<<<
 *                         v.breakA = v.endA
 *                         if v.right_clipA:
 */
            goto __pyx_L34;
          }

          /* "dysgu/sv_category.pyx":179
 * 
 *                     else:  # guess left
 *                         v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                         if v.left_clipA:
 *                             v.breakA_precise = 1
 */
          /*else*/ {
            __pyx_t_3 = __pyx_v_v->posA;
            __pyx_v_v->breakA = __pyx_t_3;

            /* "dysgu/sv_category.pyx":180
 *                     else:  # guess left
 *                         v.breakA = v.posA
 *                         if v.left_clipA:             # <<<<<<<<<<<<<<
 *                             v.breakA_precise = 1
 * 
 */
            __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
            if (__pyx_t_1) {

              /* "dysgu/sv_category.pyx":181
 *                         v.breakA = v.posA
 *                         if v.left_clipA:
 *                             v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                         v.breakB = v.posB
 */
              __pyx_v_v->breakA_precise = 1;

              /* "dysgu/sv_category.pyx":180
 *                     else:  # guess left
 *                         v.breakA = v.posA
 *                         if v.left_clipA:             # <<<<<<<<<<<<<<
 *                             v.breakA_precise = 1
 * 
 */
            }

            /* "dysgu/sv_category.pyx":183
 *                             v.breakA_precise = 1
 * 
 *                         v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                         if v.left_clipB:
 *                             v.breakB_precise = 1
 */
            __pyx_t_3 = __pyx_v_v->posB;
            __pyx_v_v->breakB = __pyx_t_3;

            /* "dysgu/sv_category.pyx":184
 * 
 *                         v.breakB = v.posB
 *                         if v.left_clipB:             # <<<<<<<<<<<<<<
 *                             v.breakB_precise = 1
 * 
 */
            __pyx_t_1 = (__pyx_v_v->left_clipB != 0);
            if (__pyx_t_1) {

              /* "dysgu/sv_category.pyx":185
 *                         v.breakB = v.posB
 *                         if v.left_clipB:
 *                             v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                         v.svtype = "INV"
 */
              __pyx_v_v->breakB_precise = 1;

              /* "dysgu/sv_category.pyx":184
 * 
 *                         v.breakB = v.posB
 *                         if v.left_clipB:             # <<<<<<<<<<<<<<
 *                             v.breakB_precise = 1
 * 
 */
            }

            /* "dysgu/sv_category.pyx":187
 *                             v.breakB_precise = 1
 * 
 *                         v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                         v.join_type = "5to5"
 * 
 */
            __Pyx_INCREF(__pyx_n_u_INV);
            __Pyx_GIVEREF(__pyx_n_u_INV);
            __Pyx_GOTREF(__pyx_v_v->svtype);
            __Pyx_DECREF(__pyx_v_v->svtype);
            __pyx_v_v->svtype = __pyx_n_u_INV;

            /* "dysgu/sv_category.pyx":188
 * 
 *                         v.svtype = "INV"
 *                         v.join_type = "5to5"             # <<<<<<<<<<<<<<
 * 
 *                 else:  # either no clips or right clips
 */
            __Pyx_INCREF(__pyx_kp_u_5to5);
            __Pyx_GIVEREF(__pyx_kp_u_5to5);
            __Pyx_GOTREF(__pyx_v_v->join_type);
            __Pyx_DECREF(__pyx_v_v->join_type);
            __pyx_v_v->join_type = __pyx_kp_u_5to5;
          }
          __pyx_L34:;

          /* "dysgu/sv_category.pyx":164
 * 
 *             else:  # strand == 3
 *                 if not (v.right_clipA or v.right_clipB) and (v.left_clipA or v.left_clipB):  # only left clips             # <<<<<<<<<<<<<<
 * 
 *                     if (v.posA < v.posB and v.left_clipB) or (v.posB < v.posA and v.left_clipA):  # guess right
 */
          goto __pyx_L28;
        }

        /* "dysgu/sv_category.pyx":192
 *                 else:  # either no clips or right clips
 * 
 *                     v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                     if v.left_clipA:
 *                         v.breakA_precise = 1
 */
        /*else*/ {
          __pyx_t_3 = __pyx_v_v->endA;
          __pyx_v_v->breakA = __pyx_t_3;

          /* "dysgu/sv_category.pyx":193
 * 
 *                     v.breakA = v.endA
 *                     if v.left_clipA:             # <<<<<<<<<<<<<<
 *                         v.breakA_precise = 1
 * 
 */
          __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
          if (__pyx_t_1) {

            /* "dysgu/sv_category.pyx":194
 *                     v.breakA = v.endA
 *                     if v.left_clipA:
 *                         v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                     v.breakB = v.endB
 */
            __pyx_v_v->breakA_precise = 1;

            /* "dysgu/sv_category.pyx":193
 * 
 *                     v.breakA = v.endA
 *                     if v.left_clipA:             # <<<<<<<<<<<<<<
 *                         v.breakA_precise = 1
 * 
 */
          }

          /* "dysgu/sv_category.pyx":196
 *                         v.breakA_precise = 1
 * 
 *                     v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                     if v.right_clipB:
 *                         v.breakB_precise = 1
 */
          __pyx_t_3 = __pyx_v_v->endB;
          __pyx_v_v->breakB = __pyx_t_3;

          /* "dysgu/sv_category.pyx":197
 * 
 *                     v.breakB = v.endB
 *                     if v.right_clipB:             # <<<<<<<<<<<<<<
 *                         v.breakB_precise = 1
 * 
 */
          __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
          if (__pyx_t_1) {

            /* "dysgu/sv_category.pyx":198
 *                     v.breakB = v.endB
 *                     if v.right_clipB:
 *                         v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                     v.svtype = "INV"
 */
            __pyx_v_v->breakB_precise = 1;

            /* "dysgu/sv_category.pyx":197
 * 
 *                     v.breakB = v.endB
 *                     if v.right_clipB:             # <<<<<<<<<<<<<<
 *                         v.breakB_precise = 1
 * 
 */
          }

          /* "dysgu/sv_category.pyx":200
 *                         v.breakB_precise = 1
 * 
 *                     v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                     v.join_type = "3to3"
 * 
 */
          __Pyx_INCREF(__pyx_n_u_INV);
          __Pyx_GIVEREF(__pyx_n_u_INV);
          __Pyx_GOTREF(__pyx_v_v->svtype);
          __Pyx_DECREF(__pyx_v_v->svtype);
          __pyx_v_v->svtype = __pyx_n_u_INV;

          /* "dysgu/sv_category.pyx":201
 * 
 *                     v.svtype = "INV"
 *                     v.join_type = "3to3"             # <<<<<<<<<<<<<<
 * 
 *     else:  # B < A
 */
          __Pyx_INCREF(__pyx_kp_u_3to3);
          __Pyx_GIVEREF(__pyx_kp_u_3to3);
          __Pyx_GOTREF(__pyx_v_v->join_type);
          __Pyx_DECREF(__pyx_v_v->join_type);
          __pyx_v_v->join_type = __pyx_kp_u_3to3;
        }
        __pyx_L28:;
      }
      __pyx_L17:;
    }
    __pyx_L7:;

    /* "dysgu/sv_category.pyx":104
 * cdef void two_primary(AlignmentItem v):
 * 
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA < v.endB):             # <<<<<<<<<<<<<<
 * 
 *         if v.strandA == 3 and v.strandB == 5:  # DEL type
 */
    goto __pyx_L3;
  }

  /* "dysgu/sv_category.pyx":205
 *     else:  # B < A
 * 
 *         if v.strandA == 5 and v.strandB == 3:  # DEL type             # <<<<<<<<<<<<<<
 *             v.breakA = v.posA
 *             if v.left_clipA:
 */
  /*else*/ {
    __pyx_t_2 = (__pyx_v_v->strandA == 5);
    if (__pyx_t_2) {
    } else {
      __pyx_t_1 = __pyx_t_2;
      goto __pyx_L46_bool_binop_done;
    }
    __pyx_t_2 = (__pyx_v_v->strandB == 3);
    __pyx_t_1 = __pyx_t_2;
    __pyx_L46_bool_binop_done:;
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":206
 * 
 *         if v.strandA == 5 and v.strandB == 3:  # DEL type
 *             v.breakA = v.posA             # <<<<<<<<<<<<<<
 *             if v.left_clipA:
 *                 v.breakA_precise = 1
 */
      __pyx_t_3 = __pyx_v_v->posA;
      __pyx_v_v->breakA = __pyx_t_3;

      /* "dysgu/sv_category.pyx":207
 *         if v.strandA == 5 and v.strandB == 3:  # DEL type
 *             v.breakA = v.posA
 *             if v.left_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 * 
 */
      __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":208
 *             v.breakA = v.posA
 *             if v.left_clipA:
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *             v.breakB = v.endB
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":207
 *         if v.strandA == 5 and v.strandB == 3:  # DEL type
 *             v.breakA = v.posA
 *             if v.left_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 * 
 */
      }

      /* "dysgu/sv_category.pyx":210
 *                 v.breakA_precise = 1
 * 
 *             v.breakB = v.endB             # <<<<<<<<<<<<<<
 *             if v.right_clipB:
 *                 v.breakB_precise = 1
 */
      __pyx_t_3 = __pyx_v_v->endB;
      __pyx_v_v->breakB = __pyx_t_3;

      /* "dysgu/sv_category.pyx":211
 * 
 *             v.breakB = v.endB
 *             if v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
      __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":212
 *             v.breakB = v.endB
 *             if v.right_clipB:
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *             if v.endB >= v.posA:
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":211
 * 
 *             v.breakB = v.endB
 *             if v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
      }

      /* "dysgu/sv_category.pyx":214
 *                 v.breakB_precise = 1
 * 
 *             if v.endB >= v.posA:             # <<<<<<<<<<<<<<
 *                 v.svtype = "INS"
 *                 v.join_type = "3to5"
 */
      __pyx_t_1 = (__pyx_v_v->endB >= __pyx_v_v->posA);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":215
 * 
 *             if v.endB >= v.posA:
 *                 v.svtype = "INS"             # <<<<<<<<<<<<<<
 *                 v.join_type = "3to5"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INS);
        __Pyx_GIVEREF(__pyx_n_u_INS);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INS;

        /* "dysgu/sv_category.pyx":216
 *             if v.endB >= v.posA:
 *                 v.svtype = "INS"
 *                 v.join_type = "3to5"             # <<<<<<<<<<<<<<
 * 
 *             else:
 */
        __Pyx_INCREF(__pyx_kp_u_3to5);
        __Pyx_GIVEREF(__pyx_kp_u_3to5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_3to5;

        /* "dysgu/sv_category.pyx":214
 *                 v.breakB_precise = 1
 * 
 *             if v.endB >= v.posA:             # <<<<<<<<<<<<<<
 *                 v.svtype = "INS"
 *                 v.join_type = "3to5"
 */
        goto __pyx_L50;
      }

      /* "dysgu/sv_category.pyx":219
 * 
 *             else:
 *                 v.svtype = "DEL"             # <<<<<<<<<<<<<<
 *                 v.join_type = "3to5"
 * 
 */
      /*else*/ {
        __Pyx_INCREF(__pyx_n_u_DEL);
        __Pyx_GIVEREF(__pyx_n_u_DEL);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_DEL;

        /* "dysgu/sv_category.pyx":220
 *             else:
 *                 v.svtype = "DEL"
 *                 v.join_type = "3to5"             # <<<<<<<<<<<<<<
 * 
 *         elif v.strandB == 5 and v.strandA == 3:  # DUP type
 */
        __Pyx_INCREF(__pyx_kp_u_3to5);
        __Pyx_GIVEREF(__pyx_kp_u_3to5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_3to5;
      }
      __pyx_L50:;

      /* "dysgu/sv_category.pyx":205
 *     else:  # B < A
 * 
 *         if v.strandA == 5 and v.strandB == 3:  # DEL type             # <<<<<<<<<<<<<<
 *             v.breakA = v.posA
 *             if v.left_clipA:
 */
      goto __pyx_L45;
    }

    /* "dysgu/sv_category.pyx":222
 *                 v.join_type = "3to5"
 * 
 *         elif v.strandB == 5 and v.strandA == 3:  # DUP type             # <<<<<<<<<<<<<<
 *             v.breakA = v.endA
 *             if v.right_clipA:
 */
    __pyx_t_2 = (__pyx_v_v->strandB == 5);
    if (__pyx_t_2) {
    } else {
      __pyx_t_1 = __pyx_t_2;
      goto __pyx_L51_bool_binop_done;
    }
    __pyx_t_2 = (__pyx_v_v->strandA == 3);
    __pyx_t_1 = __pyx_t_2;
    __pyx_L51_bool_binop_done:;
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":223
 * 
 *         elif v.strandB == 5 and v.strandA == 3:  # DUP type
 *             v.breakA = v.endA             # <<<<<<<<<<<<<<
 *             if v.right_clipA:
 *                 v.breakA_precise = 1
 */
      __pyx_t_3 = __pyx_v_v->endA;
      __pyx_v_v->breakA = __pyx_t_3;

      /* "dysgu/sv_category.pyx":224
 *         elif v.strandB == 5 and v.strandA == 3:  # DUP type
 *             v.breakA = v.endA
 *             if v.right_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 * 
 */
      __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":225
 *             v.breakA = v.endA
 *             if v.right_clipA:
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *             v.breakB = v.posB
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":224
 *         elif v.strandB == 5 and v.strandA == 3:  # DUP type
 *             v.breakA = v.endA
 *             if v.right_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 * 
 */
      }

      /* "dysgu/sv_category.pyx":227
 *                 v.breakA_precise = 1
 * 
 *             v.breakB = v.posB             # <<<<<<<<<<<<<<
 *             if v.left_clipB:
 *                 v.breakB_precise = 1
 */
      __pyx_t_3 = __pyx_v_v->posB;
      __pyx_v_v->breakB = __pyx_t_3;

      /* "dysgu/sv_category.pyx":228
 * 
 *             v.breakB = v.posB
 *             if v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
      __pyx_t_1 = (__pyx_v_v->left_clipB != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":229
 *             v.breakB = v.posB
 *             if v.left_clipB:
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *             v.svtype = "DUP"
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":228
 * 
 *             v.breakB = v.posB
 *             if v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
      }

      /* "dysgu/sv_category.pyx":231
 *                 v.breakB_precise = 1
 * 
 *             v.svtype = "DUP"             # <<<<<<<<<<<<<<
 *             v.join_type = "5to3"
 * 
 */
      __Pyx_INCREF(__pyx_n_u_DUP);
      __Pyx_GIVEREF(__pyx_n_u_DUP);
      __Pyx_GOTREF(__pyx_v_v->svtype);
      __Pyx_DECREF(__pyx_v_v->svtype);
      __pyx_v_v->svtype = __pyx_n_u_DUP;

      /* "dysgu/sv_category.pyx":232
 * 
 *             v.svtype = "DUP"
 *             v.join_type = "5to3"             # <<<<<<<<<<<<<<
 * 
 *             # INV type
 */
      __Pyx_INCREF(__pyx_kp_u_5to3);
      __Pyx_GIVEREF(__pyx_kp_u_5to3);
      __Pyx_GOTREF(__pyx_v_v->join_type);
      __Pyx_DECREF(__pyx_v_v->join_type);
      __pyx_v_v->join_type = __pyx_kp_u_5to3;

      /* "dysgu/sv_category.pyx":222
 *                 v.join_type = "3to5"
 * 
 *         elif v.strandB == 5 and v.strandA == 3:  # DUP type             # <<<<<<<<<<<<<<
 *             v.breakA = v.endA
 *             if v.right_clipA:
 */
      goto __pyx_L45;
    }

    /* "dysgu/sv_category.pyx":235
 * 
 *             # INV type
 *         elif v.strandA == 5:             # <<<<<<<<<<<<<<
 * 
 *             if not (v.left_clipA or v.left_clipB) and (v.right_clipA or v.right_clipB):
 */
    __pyx_t_1 = (__pyx_v_v->strandA == 5);
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":237
 *         elif v.strandA == 5:
 * 
 *             if not (v.left_clipA or v.left_clipB) and (v.right_clipA or v.right_clipB):             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 */
      __pyx_t_4 = (__pyx_v_v->left_clipA != 0);
      if (!__pyx_t_4) {
      } else {
        __pyx_t_2 = __pyx_t_4;
        goto __pyx_L58_bool_binop_done;
      }
      __pyx_t_4 = (__pyx_v_v->left_clipB != 0);
      __pyx_t_2 = __pyx_t_4;
      __pyx_L58_bool_binop_done:;
      __pyx_t_4 = (!__pyx_t_2);
      if (__pyx_t_4) {
      } else {
        __pyx_t_1 = __pyx_t_4;
        goto __pyx_L56_bool_binop_done;
      }
      __pyx_t_4 = (__pyx_v_v->right_clipA != 0);
      if (!__pyx_t_4) {
      } else {
        __pyx_t_1 = __pyx_t_4;
        goto __pyx_L56_bool_binop_done;
      }
      __pyx_t_4 = (__pyx_v_v->right_clipB != 0);
      __pyx_t_1 = __pyx_t_4;
      __pyx_L56_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":238
 * 
 *             if not (v.left_clipA or v.left_clipB) and (v.right_clipA or v.right_clipB):
 *                 v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":239
 *             if not (v.left_clipA or v.left_clipB) and (v.right_clipA or v.right_clipB):
 *                 v.breakA = v.endA
 *                 if v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 * 
 */
        __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":240
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                 v.breakB = v.endB
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":239
 *             if not (v.left_clipA or v.left_clipB) and (v.right_clipA or v.right_clipB):
 *                 v.breakA = v.endA
 *                 if v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 * 
 */
        }

        /* "dysgu/sv_category.pyx":242
 *                     v.breakA_precise = 1
 * 
 *                 v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":243
 * 
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":244
 *                 v.breakB = v.endB
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                 v.svtype = "INV"
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":243
 * 
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        }

        /* "dysgu/sv_category.pyx":246
 *                     v.breakB_precise = 1
 * 
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "3to3"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":247
 * 
 *                 v.svtype = "INV"
 *                 v.join_type = "3to3"             # <<<<<<<<<<<<<<
 * 
 *             else:
 */
        __Pyx_INCREF(__pyx_kp_u_3to3);
        __Pyx_GIVEREF(__pyx_kp_u_3to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_3to3;

        /* "dysgu/sv_category.pyx":237
 *         elif v.strandA == 5:
 * 
 *             if not (v.left_clipA or v.left_clipB) and (v.right_clipA or v.right_clipB):             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 */
        goto __pyx_L55;
      }

      /* "dysgu/sv_category.pyx":250
 * 
 *             else:
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1
 */
      /*else*/ {
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":251
 *             else:
 *                 v.breakA = v.posA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 * 
 */
        __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":252
 *                 v.breakA = v.posA
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                 v.breakB = v.posB
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":251
 *             else:
 *                 v.breakA = v.posA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 * 
 */
        }

        /* "dysgu/sv_category.pyx":254
 *                     v.breakA_precise = 1
 * 
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":255
 * 
 *                 v.breakB = v.posB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":256
 *                 v.breakB = v.posB
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                 v.svtype = "INV"
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":255
 * 
 *                 v.breakB = v.posB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        }

        /* "dysgu/sv_category.pyx":258
 *                     v.breakB_precise = 1
 * 
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to5"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":259
 * 
 *                 v.svtype = "INV"
 *                 v.join_type = "5to5"             # <<<<<<<<<<<<<<
 * 
 *         elif v.strandA == 3:
 */
        __Pyx_INCREF(__pyx_kp_u_5to5);
        __Pyx_GIVEREF(__pyx_kp_u_5to5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to5;
      }
      __pyx_L55:;

      /* "dysgu/sv_category.pyx":235
 * 
 *             # INV type
 *         elif v.strandA == 5:             # <<<<<<<<<<<<<<
 * 
 *             if not (v.left_clipA or v.left_clipB) and (v.right_clipA or v.right_clipB):
 */
      goto __pyx_L45;
    }

    /* "dysgu/sv_category.pyx":261
 *                 v.join_type = "5to5"
 * 
 *         elif v.strandA == 3:             # <<<<<<<<<<<<<<
 * 
 *             if not (v.right_clipA or v.right_clipB) and (v.left_clipA or v.left_clipB):
 */
    __pyx_t_1 = (__pyx_v_v->strandA == 3);
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":263
 *         elif v.strandA == 3:
 * 
 *             if not (v.right_clipA or v.right_clipB) and (v.left_clipA or v.left_clipB):             # <<<<<<<<<<<<<<
 *                 v.breakA = v.posA
 *                 if v.right_clipA:
 */
      __pyx_t_2 = (__pyx_v_v->right_clipA != 0);
      if (!__pyx_t_2) {
      } else {
        __pyx_t_4 = __pyx_t_2;
        goto __pyx_L68_bool_binop_done;
      }
      __pyx_t_2 = (__pyx_v_v->right_clipB != 0);
      __pyx_t_4 = __pyx_t_2;
      __pyx_L68_bool_binop_done:;
      __pyx_t_2 = (!__pyx_t_4);
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L66_bool_binop_done;
      }
      __pyx_t_2 = (__pyx_v_v->left_clipA != 0);
      if (!__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L66_bool_binop_done;
      }
      __pyx_t_2 = (__pyx_v_v->left_clipB != 0);
      __pyx_t_1 = __pyx_t_2;
      __pyx_L66_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":264
 * 
 *             if not (v.right_clipA or v.right_clipB) and (v.left_clipA or v.left_clipB):
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":265
 *             if not (v.right_clipA or v.right_clipB) and (v.left_clipA or v.left_clipB):
 *                 v.breakA = v.posA
 *                 if v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 * 
 */
        __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":266
 *                 v.breakA = v.posA
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                 v.breakB = v.posB
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":265
 *             if not (v.right_clipA or v.right_clipB) and (v.left_clipA or v.left_clipB):
 *                 v.breakA = v.posA
 *                 if v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 * 
 */
        }

        /* "dysgu/sv_category.pyx":268
 *                     v.breakA_precise = 1
 * 
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":269
 * 
 *                 v.breakB = v.posB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":270
 *                 v.breakB = v.posB
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                 v.svtype = "INV"
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":269
 * 
 *                 v.breakB = v.posB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        }

        /* "dysgu/sv_category.pyx":272
 *                     v.breakB_precise = 1
 * 
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to5"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":273
 * 
 *                 v.svtype = "INV"
 *                 v.join_type = "5to5"             # <<<<<<<<<<<<<<
 * 
 *             else:
 */
        __Pyx_INCREF(__pyx_kp_u_5to5);
        __Pyx_GIVEREF(__pyx_kp_u_5to5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to5;

        /* "dysgu/sv_category.pyx":263
 *         elif v.strandA == 3:
 * 
 *             if not (v.right_clipA or v.right_clipB) and (v.left_clipA or v.left_clipB):             # <<<<<<<<<<<<<<
 *                 v.breakA = v.posA
 *                 if v.right_clipA:
 */
        goto __pyx_L65;
      }

      /* "dysgu/sv_category.pyx":277
 *             else:
 * 
 *                 v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1
 */
      /*else*/ {
        __pyx_t_3 = __pyx_v_v->endA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":278
 * 
 *                 v.breakA = v.endA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 * 
 */
        __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":279
 *                 v.breakA = v.endA
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                 v.breakB = v.endB
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":278
 * 
 *                 v.breakA = v.endA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 * 
 */
        }

        /* "dysgu/sv_category.pyx":281
 *                     v.breakA_precise = 1
 * 
 *                 v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":282
 * 
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":283
 *                 v.breakB = v.endB
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                 v.svtype = "INV"
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":282
 * 
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        }

        /* "dysgu/sv_category.pyx":285
 *                     v.breakB_precise = 1
 * 
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "3to3"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":286
 * 
 *                 v.svtype = "INV"
 *                 v.join_type = "3to3"             # <<<<<<<<<<<<<<
 * 
 * 
 */
        __Pyx_INCREF(__pyx_kp_u_3to3);
        __Pyx_GIVEREF(__pyx_kp_u_3to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_3to3;
      }
      __pyx_L65:;

      /* "dysgu/sv_category.pyx":261
 *                 v.join_type = "5to5"
 * 
 *         elif v.strandA == 3:             # <<<<<<<<<<<<<<
 * 
 *             if not (v.right_clipA or v.right_clipB) and (v.left_clipA or v.left_clipB):
 */
    }
    __pyx_L45:;
  }
  __pyx_L3:;

  /* "dysgu/sv_category.pyx":102
 * #                     v.svtype = "DEL"
 * 
 * cdef void two_primary(AlignmentItem v):             # <<<<<<<<<<<<<<
 * 
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA < v.endB):
 */

  /* function exit code */
  __Pyx_RefNannyFinishContext();
}

/* "dysgu/sv_category.pyx":289
 * 
 * 
 * cdef void same_read(AlignmentItem v):             # <<<<<<<<<<<<<<
 * 
 *     cdef int query_gap = 0
 */

static void __pyx_f_5dysgu_11sv_category_same_read(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_v) {
  int __pyx_v_query_gap;
  int __pyx_v_ref_gap;
  CYTHON_UNUSED int __pyx_v_query_overlap;
  CYTHON_UNUSED int __pyx_v_inferred_sv_len;
  PyObject *__pyx_v_align_overlap = NULL;
  __Pyx_RefNannyDeclarations
  int __pyx_t_1;
  int __pyx_t_2;
  int __pyx_t_3;
  PyObject *__pyx_t_4 = NULL;
  PyObject *__pyx_t_5 = NULL;
  Py_ssize_t __pyx_t_6;
  Py_UCS4 __pyx_t_7;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("same_read", 1);

  /* "dysgu/sv_category.pyx":291
 * cdef void same_read(AlignmentItem v):
 * 
 *     cdef int query_gap = 0             # <<<<<<<<<<<<<<
 *     cdef int ref_gap = 0
 *     cdef int query_overlap = 0
 */
  __pyx_v_query_gap = 0;

  /* "dysgu/sv_category.pyx":292
 * 
 *     cdef int query_gap = 0
 *     cdef int ref_gap = 0             # <<<<<<<<<<<<<<
 *     cdef int query_overlap = 0
 *     cdef int inferred_sv_len = -1
 */
  __pyx_v_ref_gap = 0;

  /* "dysgu/sv_category.pyx":293
 *     cdef int query_gap = 0
 *     cdef int ref_gap = 0
 *     cdef int query_overlap = 0             # <<<<<<<<<<<<<<
 *     cdef int inferred_sv_len = -1
 * 
 */
  __pyx_v_query_overlap = 0;

  /* "dysgu/sv_category.pyx":294
 *     cdef int ref_gap = 0
 *     cdef int query_overlap = 0
 *     cdef int inferred_sv_len = -1             # <<<<<<<<<<<<<<
 * 
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA <= v.endB):  # A is first
 */
  __pyx_v_inferred_sv_len = -1;

  /* "dysgu/sv_category.pyx":296
 *     cdef int inferred_sv_len = -1
 * 
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA <= v.endB):  # A is first             # <<<<<<<<<<<<<<
 * 
 *         if v.strandA == v.strandB:  # Same for 3 and 5 strand reads
 */
  __pyx_t_2 = (__pyx_v_v->posA < __pyx_v_v->posB);
  if (!__pyx_t_2) {
  } else {
    __pyx_t_1 = __pyx_t_2;
    goto __pyx_L4_bool_binop_done;
  }
  __pyx_t_2 = (__pyx_v_v->posA == __pyx_v_v->posB);
  if (__pyx_t_2) {
  } else {
    __pyx_t_1 = __pyx_t_2;
    goto __pyx_L4_bool_binop_done;
  }
  __pyx_t_2 = (__pyx_v_v->endA <= __pyx_v_v->endB);
  __pyx_t_1 = __pyx_t_2;
  __pyx_L4_bool_binop_done:;
  if (__pyx_t_1) {

    /* "dysgu/sv_category.pyx":298
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA <= v.endB):  # A is first
 * 
 *         if v.strandA == v.strandB:  # Same for 3 and 5 strand reads             # <<<<<<<<<<<<<<
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP
 */
    __pyx_t_1 = (__pyx_v_v->strandA == __pyx_v_v->strandB);
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":300
 *         if v.strandA == v.strandB:  # Same for 3 and 5 strand reads
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP             # <<<<<<<<<<<<<<
 *                 if v.left_clipA:
 *                     v.breakA = v.posA
 */
      __pyx_t_3 = __pyx_f_5dysgu_13map_set_utils_is_overlapping(__pyx_v_v->posA, __pyx_v_v->endA, __pyx_v_v->posB, __pyx_v_v->endB, 0); if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 300, __pyx_L1_error)
      __pyx_t_1 = (__pyx_t_3 != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":301
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA = v.posA
 *                     v.breakA_precise = 1
 */
        __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":302
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP
 *                 if v.left_clipA:
 *                     v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 elif v.right_clipA:
 */
          __pyx_t_3 = __pyx_v_v->posA;
          __pyx_v_v->breakA = __pyx_t_3;

          /* "dysgu/sv_category.pyx":303
 *                 if v.left_clipA:
 *                     v.breakA = v.posA
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 elif v.right_clipA:
 *                     v.breakA = v.endA
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":301
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA = v.posA
 *                     v.breakA_precise = 1
 */
          goto __pyx_L9;
        }

        /* "dysgu/sv_category.pyx":304
 *                     v.breakA = v.posA
 *                     v.breakA_precise = 1
 *                 elif v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA = v.endA
 *                     v.breakA_precise = 1
 */
        __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":305
 *                     v.breakA_precise = 1
 *                 elif v.right_clipA:
 *                     v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 else:
 */
          __pyx_t_3 = __pyx_v_v->endA;
          __pyx_v_v->breakA = __pyx_t_3;

          /* "dysgu/sv_category.pyx":306
 *                 elif v.right_clipA:
 *                     v.breakA = v.endA
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 else:
 *                     v.breakA = v.endA
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":304
 *                     v.breakA = v.posA
 *                     v.breakA_precise = 1
 *                 elif v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA = v.endA
 *                     v.breakA_precise = 1
 */
          goto __pyx_L9;
        }

        /* "dysgu/sv_category.pyx":308
 *                     v.breakA_precise = 1
 *                 else:
 *                     v.breakA = v.endA             # <<<<<<<<<<<<<<
 * 
 *                 if v.left_clipB:
 */
        /*else*/ {
          __pyx_t_3 = __pyx_v_v->endA;
          __pyx_v_v->breakA = __pyx_t_3;
        }
        __pyx_L9:;

        /* "dysgu/sv_category.pyx":310
 *                     v.breakA = v.endA
 * 
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB = v.posB
 *                     v.breakB_precise = 1
 */
        __pyx_t_1 = (__pyx_v_v->left_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":311
 * 
 *                 if v.left_clipB:
 *                     v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 elif v.right_clipB:
 */
          __pyx_t_3 = __pyx_v_v->posB;
          __pyx_v_v->breakB = __pyx_t_3;

          /* "dysgu/sv_category.pyx":312
 *                 if v.left_clipB:
 *                     v.breakB = v.posB
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 elif v.right_clipB:
 *                     v.breakB = v.endB
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":310
 *                     v.breakA = v.endA
 * 
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB = v.posB
 *                     v.breakB_precise = 1
 */
          goto __pyx_L10;
        }

        /* "dysgu/sv_category.pyx":313
 *                     v.breakB = v.posB
 *                     v.breakB_precise = 1
 *                 elif v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB = v.endB
 *                     v.breakB_precise = 1
 */
        __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":314
 *                     v.breakB_precise = 1
 *                 elif v.right_clipB:
 *                     v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 else:
 */
          __pyx_t_3 = __pyx_v_v->endB;
          __pyx_v_v->breakB = __pyx_t_3;

          /* "dysgu/sv_category.pyx":315
 *                 elif v.right_clipB:
 *                     v.breakB = v.endB
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 else:
 *                     v.breakB = v.endB
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":313
 *                     v.breakB = v.posB
 *                     v.breakB_precise = 1
 *                 elif v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB = v.endB
 *                     v.breakB_precise = 1
 */
          goto __pyx_L10;
        }

        /* "dysgu/sv_category.pyx":317
 *                     v.breakB_precise = 1
 *                 else:
 *                     v.breakB = v.endB             # <<<<<<<<<<<<<<
 * 
 *                 v.svtype = "DUP"
 */
        /*else*/ {
          __pyx_t_3 = __pyx_v_v->endB;
          __pyx_v_v->breakB = __pyx_t_3;
        }
        __pyx_L10:;

        /* "dysgu/sv_category.pyx":319
 *                     v.breakB = v.endB
 * 
 *                 v.svtype = "DUP"             # <<<<<<<<<<<<<<
 *                 # Check if gap on query is bigger than gap on reference
 *                 ref_gap = abs(v.breakB - v.breakA)
 */
        __Pyx_INCREF(__pyx_n_u_DUP);
        __Pyx_GIVEREF(__pyx_n_u_DUP);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_DUP;

        /* "dysgu/sv_category.pyx":321
 *                 v.svtype = "DUP"
 *                 # Check if gap on query is bigger than gap on reference
 *                 ref_gap = abs(v.breakB - v.breakA)             # <<<<<<<<<<<<<<
 *                 if v.a_qstart > v.b_qstart:  # B is first on query seq
 *                     align_overlap = v.b_qend - v.a_qstart  # note, this is negative if there is a gap between alignments
 */
        __pyx_t_3 = abs((__pyx_v_v->breakB - __pyx_v_v->breakA)); if (unlikely(__pyx_t_3 == ((int)-1))) __PYX_ERR(2, 321, __pyx_L1_error)
        __pyx_v_ref_gap = __pyx_t_3;

        /* "dysgu/sv_category.pyx":322
 *                 # Check if gap on query is bigger than gap on reference
 *                 ref_gap = abs(v.breakB - v.breakA)
 *                 if v.a_qstart > v.b_qstart:  # B is first on query seq             # <<<<<<<<<<<<<<
 *                     align_overlap = v.b_qend - v.a_qstart  # note, this is negative if there is a gap between alignments
 *                 else:
 */
        __pyx_t_1 = (__pyx_v_v->a_qstart > __pyx_v_v->b_qstart);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":323
 *                 ref_gap = abs(v.breakB - v.breakA)
 *                 if v.a_qstart > v.b_qstart:  # B is first on query seq
 *                     align_overlap = v.b_qend - v.a_qstart  # note, this is negative if there is a gap between alignments             # <<<<<<<<<<<<<<
 *                 else:
 *                     align_overlap = v.a_qend - v.b_qstart
 */
          __pyx_t_4 = __Pyx_PyInt_From_int((__pyx_v_v->b_qend - __pyx_v_v->a_qstart)); if (unlikely(!__pyx_t_4)) __PYX_ERR(2, 323, __pyx_L1_error)
          __Pyx_GOTREF(__pyx_t_4);
          __pyx_v_align_overlap = __pyx_t_4;
          __pyx_t_4 = 0;

          /* "dysgu/sv_category.pyx":322
 *                 # Check if gap on query is bigger than gap on reference
 *                 ref_gap = abs(v.breakB - v.breakA)
 *                 if v.a_qstart > v.b_qstart:  # B is first on query seq             # <<<<<<<<<<<<<<
 *                     align_overlap = v.b_qend - v.a_qstart  # note, this is negative if there is a gap between alignments
 *                 else:
 */
          goto __pyx_L11;
        }

        /* "dysgu/sv_category.pyx":325
 *                     align_overlap = v.b_qend - v.a_qstart  # note, this is negative if there is a gap between alignments
 *                 else:
 *                     align_overlap = v.a_qend - v.b_qstart             # <<<<<<<<<<<<<<
 *                 # align_overlap = 0 if align_overlap < 0 else align_overlap
 *                 v.inferred_sv_len = ref_gap - align_overlap
 */
        /*else*/ {
          __pyx_t_4 = __Pyx_PyInt_From_int((__pyx_v_v->a_qend - __pyx_v_v->b_qstart)); if (unlikely(!__pyx_t_4)) __PYX_ERR(2, 325, __pyx_L1_error)
          __Pyx_GOTREF(__pyx_t_4);
          __pyx_v_align_overlap = __pyx_t_4;
          __pyx_t_4 = 0;
        }
        __pyx_L11:;

        /* "dysgu/sv_category.pyx":327
 *                     align_overlap = v.a_qend - v.b_qstart
 *                 # align_overlap = 0 if align_overlap < 0 else align_overlap
 *                 v.inferred_sv_len = ref_gap - align_overlap             # <<<<<<<<<<<<<<
 *                 if align_overlap < 0:
 *                     v.query_gap = align_overlap
 */
        __pyx_t_4 = __Pyx_PyInt_From_int(__pyx_v_ref_gap); if (unlikely(!__pyx_t_4)) __PYX_ERR(2, 327, __pyx_L1_error)
        __Pyx_GOTREF(__pyx_t_4);
        __pyx_t_5 = PyNumber_Subtract(__pyx_t_4, __pyx_v_align_overlap); if (unlikely(!__pyx_t_5)) __PYX_ERR(2, 327, __pyx_L1_error)
        __Pyx_GOTREF(__pyx_t_5);
        __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
        __pyx_t_3 = __Pyx_PyInt_As_int(__pyx_t_5); if (unlikely((__pyx_t_3 == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 327, __pyx_L1_error)
        __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
        __pyx_v_v->inferred_sv_len = __pyx_t_3;

        /* "dysgu/sv_category.pyx":328
 *                 # align_overlap = 0 if align_overlap < 0 else align_overlap
 *                 v.inferred_sv_len = ref_gap - align_overlap
 *                 if align_overlap < 0:             # <<<<<<<<<<<<<<
 *                     v.query_gap = align_overlap
 *                 else:
 */
        __pyx_t_5 = PyObject_RichCompare(__pyx_v_align_overlap, __pyx_int_0, Py_LT); __Pyx_XGOTREF(__pyx_t_5); if (unlikely(!__pyx_t_5)) __PYX_ERR(2, 328, __pyx_L1_error)
        __pyx_t_1 = __Pyx_PyObject_IsTrue(__pyx_t_5); if (unlikely((__pyx_t_1 < 0))) __PYX_ERR(2, 328, __pyx_L1_error)
        __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":329
 *                 v.inferred_sv_len = ref_gap - align_overlap
 *                 if align_overlap < 0:
 *                     v.query_gap = align_overlap             # <<<<<<<<<<<<<<
 *                 else:
 *                     v.query_overlap = align_overlap
 */
          __pyx_t_3 = __Pyx_PyInt_As_int(__pyx_v_align_overlap); if (unlikely((__pyx_t_3 == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 329, __pyx_L1_error)
          __pyx_v_v->query_gap = __pyx_t_3;

          /* "dysgu/sv_category.pyx":328
 *                 # align_overlap = 0 if align_overlap < 0 else align_overlap
 *                 v.inferred_sv_len = ref_gap - align_overlap
 *                 if align_overlap < 0:             # <<<<<<<<<<<<<<
 *                     v.query_gap = align_overlap
 *                 else:
 */
          goto __pyx_L12;
        }

        /* "dysgu/sv_category.pyx":331
 *                     v.query_gap = align_overlap
 *                 else:
 *                     v.query_overlap = align_overlap             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to3"
 * 
 */
        /*else*/ {
          __pyx_t_3 = __Pyx_PyInt_As_int(__pyx_v_align_overlap); if (unlikely((__pyx_t_3 == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 331, __pyx_L1_error)
          __pyx_v_v->query_overlap = __pyx_t_3;
        }
        __pyx_L12:;

        /* "dysgu/sv_category.pyx":332
 *                 else:
 *                     v.query_overlap = align_overlap
 *                 v.join_type = "5to3"             # <<<<<<<<<<<<<<
 * 
 *             elif not v.left_clipA and not v.right_clipB:
 */
        __Pyx_INCREF(__pyx_kp_u_5to3);
        __Pyx_GIVEREF(__pyx_kp_u_5to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to3;

        /* "dysgu/sv_category.pyx":300
 *         if v.strandA == v.strandB:  # Same for 3 and 5 strand reads
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP             # <<<<<<<<<<<<<<
 *                 if v.left_clipA:
 *                     v.breakA = v.posA
 */
        goto __pyx_L8;
      }

      /* "dysgu/sv_category.pyx":334
 *                 v.join_type = "5to3"
 * 
 *             elif not v.left_clipA and not v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 */
      __pyx_t_2 = (!(__pyx_v_v->left_clipA != 0));
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L13_bool_binop_done;
      }
      __pyx_t_2 = (!(__pyx_v_v->right_clipB != 0));
      __pyx_t_1 = __pyx_t_2;
      __pyx_L13_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":335
 * 
 *             elif not v.left_clipA and not v.right_clipB:
 *                 v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":336
 *             elif not v.left_clipA and not v.right_clipB:
 *                 v.breakA = v.endA
 *                 if v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB
 */
        __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":337
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB = v.posB
 *                 if v.left_clipB:
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":336
 *             elif not v.left_clipA and not v.right_clipB:
 *                 v.breakA = v.endA
 *                 if v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB
 */
        }

        /* "dysgu/sv_category.pyx":338
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 if v.left_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":339
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        __pyx_t_1 = (__pyx_v_v->left_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":340
 *                 v.breakB = v.posB
 *                 if v.left_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                 # Check if gap on query is bigger than gap on reference; call insertion if it is
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":339
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        }

        /* "dysgu/sv_category.pyx":343
 * 
 *                 # Check if gap on query is bigger than gap on reference; call insertion if it is
 *                 query_gap = v.b_qstart - v.a_qend  # as A is first             # <<<<<<<<<<<<<<
 *                 ref_gap = abs(v.breakB - v.breakA)
 *                 if query_gap < 0:
 */
        __pyx_v_query_gap = (__pyx_v_v->b_qstart - __pyx_v_v->a_qend);

        /* "dysgu/sv_category.pyx":344
 *                 # Check if gap on query is bigger than gap on reference; call insertion if it is
 *                 query_gap = v.b_qstart - v.a_qend  # as A is first
 *                 ref_gap = abs(v.breakB - v.breakA)             # <<<<<<<<<<<<<<
 *                 if query_gap < 0:
 *                     ref_gap += abs(query_gap)
 */
        __pyx_t_3 = abs((__pyx_v_v->breakB - __pyx_v_v->breakA)); if (unlikely(__pyx_t_3 == ((int)-1))) __PYX_ERR(2, 344, __pyx_L1_error)
        __pyx_v_ref_gap = __pyx_t_3;

        /* "dysgu/sv_category.pyx":345
 *                 query_gap = v.b_qstart - v.a_qend  # as A is first
 *                 ref_gap = abs(v.breakB - v.breakA)
 *                 if query_gap < 0:             # <<<<<<<<<<<<<<
 *                     ref_gap += abs(query_gap)
 *                     v.query_overlap = abs(query_gap)
 */
        __pyx_t_1 = (__pyx_v_query_gap < 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":346
 *                 ref_gap = abs(v.breakB - v.breakA)
 *                 if query_gap < 0:
 *                     ref_gap += abs(query_gap)             # <<<<<<<<<<<<<<
 *                     v.query_overlap = abs(query_gap)
 *                     v.query_gap = 0
 */
          __pyx_t_3 = abs(__pyx_v_query_gap); if (unlikely(__pyx_t_3 == ((int)-1))) __PYX_ERR(2, 346, __pyx_L1_error)
          __pyx_v_ref_gap = (__pyx_v_ref_gap + __pyx_t_3);

          /* "dysgu/sv_category.pyx":347
 *                 if query_gap < 0:
 *                     ref_gap += abs(query_gap)
 *                     v.query_overlap = abs(query_gap)             # <<<<<<<<<<<<<<
 *                     v.query_gap = 0
 * 
 */
          __pyx_t_3 = abs(__pyx_v_query_gap); if (unlikely(__pyx_t_3 == ((int)-1))) __PYX_ERR(2, 347, __pyx_L1_error)
          __pyx_v_v->query_overlap = __pyx_t_3;

          /* "dysgu/sv_category.pyx":348
 *                     ref_gap += abs(query_gap)
 *                     v.query_overlap = abs(query_gap)
 *                     v.query_gap = 0             # <<<<<<<<<<<<<<
 * 
 *                 else:
 */
          __pyx_v_v->query_gap = 0;

          /* "dysgu/sv_category.pyx":345
 *                 query_gap = v.b_qstart - v.a_qend  # as A is first
 *                 ref_gap = abs(v.breakB - v.breakA)
 *                 if query_gap < 0:             # <<<<<<<<<<<<<<
 *                     ref_gap += abs(query_gap)
 *                     v.query_overlap = abs(query_gap)
 */
          goto __pyx_L17;
        }

        /* "dysgu/sv_category.pyx":351
 * 
 *                 else:
 *                     v.query_overlap = 0             # <<<<<<<<<<<<<<
 *                     v.query_gap = query_gap
 * 
 */
        /*else*/ {
          __pyx_v_v->query_overlap = 0;

          /* "dysgu/sv_category.pyx":352
 *                 else:
 *                     v.query_overlap = 0
 *                     v.query_gap = query_gap             # <<<<<<<<<<<<<<
 * 
 *                 if ref_gap < query_gap:
 */
          __pyx_v_v->query_gap = __pyx_v_query_gap;
        }
        __pyx_L17:;

        /* "dysgu/sv_category.pyx":354
 *                     v.query_gap = query_gap
 * 
 *                 if ref_gap < query_gap:             # <<<<<<<<<<<<<<
 *                     v.svtype = "INS"
 *                     v.join_type = "3to5"
 */
        __pyx_t_1 = (__pyx_v_ref_gap < __pyx_v_query_gap);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":355
 * 
 *                 if ref_gap < query_gap:
 *                     v.svtype = "INS"             # <<<<<<<<<<<<<<
 *                     v.join_type = "3to5"
 *                     v.inferred_sv_len = query_gap
 */
          __Pyx_INCREF(__pyx_n_u_INS);
          __Pyx_GIVEREF(__pyx_n_u_INS);
          __Pyx_GOTREF(__pyx_v_v->svtype);
          __Pyx_DECREF(__pyx_v_v->svtype);
          __pyx_v_v->svtype = __pyx_n_u_INS;

          /* "dysgu/sv_category.pyx":356
 *                 if ref_gap < query_gap:
 *                     v.svtype = "INS"
 *                     v.join_type = "3to5"             # <<<<<<<<<<<<<<
 *                     v.inferred_sv_len = query_gap
 * 
 */
          __Pyx_INCREF(__pyx_kp_u_3to5);
          __Pyx_GIVEREF(__pyx_kp_u_3to5);
          __Pyx_GOTREF(__pyx_v_v->join_type);
          __Pyx_DECREF(__pyx_v_v->join_type);
          __pyx_v_v->join_type = __pyx_kp_u_3to5;

          /* "dysgu/sv_category.pyx":357
 *                     v.svtype = "INS"
 *                     v.join_type = "3to5"
 *                     v.inferred_sv_len = query_gap             # <<<<<<<<<<<<<<
 * 
 *                 elif v.read_overlaps_mate:
 */
          __pyx_v_v->inferred_sv_len = __pyx_v_query_gap;

          /* "dysgu/sv_category.pyx":354
 *                     v.query_gap = query_gap
 * 
 *                 if ref_gap < query_gap:             # <<<<<<<<<<<<<<
 *                     v.svtype = "INS"
 *                     v.join_type = "3to5"
 */
          goto __pyx_L18;
        }

        /* "dysgu/sv_category.pyx":359
 *                     v.inferred_sv_len = query_gap
 * 
 *                 elif v.read_overlaps_mate:             # <<<<<<<<<<<<<<
 *                     v.svtype = "DUP"
 *                     v.join_type = "5to3"
 */
        __pyx_t_1 = (__pyx_v_v->read_overlaps_mate != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":360
 * 
 *                 elif v.read_overlaps_mate:
 *                     v.svtype = "DUP"             # <<<<<<<<<<<<<<
 *                     v.join_type = "5to3"
 *                 else:
 */
          __Pyx_INCREF(__pyx_n_u_DUP);
          __Pyx_GIVEREF(__pyx_n_u_DUP);
          __Pyx_GOTREF(__pyx_v_v->svtype);
          __Pyx_DECREF(__pyx_v_v->svtype);
          __pyx_v_v->svtype = __pyx_n_u_DUP;

          /* "dysgu/sv_category.pyx":361
 *                 elif v.read_overlaps_mate:
 *                     v.svtype = "DUP"
 *                     v.join_type = "5to3"             # <<<<<<<<<<<<<<
 *                 else:
 *                     v.svtype = "DEL"
 */
          __Pyx_INCREF(__pyx_kp_u_5to3);
          __Pyx_GIVEREF(__pyx_kp_u_5to3);
          __Pyx_GOTREF(__pyx_v_v->join_type);
          __Pyx_DECREF(__pyx_v_v->join_type);
          __pyx_v_v->join_type = __pyx_kp_u_5to3;

          /* "dysgu/sv_category.pyx":359
 *                     v.inferred_sv_len = query_gap
 * 
 *                 elif v.read_overlaps_mate:             # <<<<<<<<<<<<<<
 *                     v.svtype = "DUP"
 *                     v.join_type = "5to3"
 */
          goto __pyx_L18;
        }

        /* "dysgu/sv_category.pyx":363
 *                     v.join_type = "5to3"
 *                 else:
 *                     v.svtype = "DEL"             # <<<<<<<<<<<<<<
 *                     v.join_type = "3to5"
 *                     v.inferred_sv_len = ref_gap
 */
        /*else*/ {
          __Pyx_INCREF(__pyx_n_u_DEL);
          __Pyx_GIVEREF(__pyx_n_u_DEL);
          __Pyx_GOTREF(__pyx_v_v->svtype);
          __Pyx_DECREF(__pyx_v_v->svtype);
          __pyx_v_v->svtype = __pyx_n_u_DEL;

          /* "dysgu/sv_category.pyx":364
 *                 else:
 *                     v.svtype = "DEL"
 *                     v.join_type = "3to5"             # <<<<<<<<<<<<<<
 *                     v.inferred_sv_len = ref_gap
 * 
 */
          __Pyx_INCREF(__pyx_kp_u_3to5);
          __Pyx_GIVEREF(__pyx_kp_u_3to5);
          __Pyx_GOTREF(__pyx_v_v->join_type);
          __Pyx_DECREF(__pyx_v_v->join_type);
          __pyx_v_v->join_type = __pyx_kp_u_3to5;

          /* "dysgu/sv_category.pyx":365
 *                     v.svtype = "DEL"
 *                     v.join_type = "3to5"
 *                     v.inferred_sv_len = ref_gap             # <<<<<<<<<<<<<<
 * 
 *             elif not v.right_clipA and not v.left_clipB:
 */
          __pyx_v_v->inferred_sv_len = __pyx_v_ref_gap;
        }
        __pyx_L18:;

        /* "dysgu/sv_category.pyx":334
 *                 v.join_type = "5to3"
 * 
 *             elif not v.left_clipA and not v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 */
        goto __pyx_L8;
      }

      /* "dysgu/sv_category.pyx":367
 *                     v.inferred_sv_len = ref_gap
 * 
 *             elif not v.right_clipA and not v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.posA
 *                 if v.left_clipA:
 */
      __pyx_t_2 = (!(__pyx_v_v->right_clipA != 0));
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L19_bool_binop_done;
      }
      __pyx_t_2 = (!(__pyx_v_v->left_clipB != 0));
      __pyx_t_1 = __pyx_t_2;
      __pyx_L19_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":368
 * 
 *             elif not v.right_clipA and not v.left_clipB:
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":369
 *             elif not v.right_clipA and not v.left_clipB:
 *                 v.breakA = v.posA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 */
        __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":370
 *                 v.breakA = v.posA
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB = v.endB
 *                 if v.right_clipB:
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":369
 *             elif not v.right_clipA and not v.left_clipB:
 *                 v.breakA = v.posA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 */
        }

        /* "dysgu/sv_category.pyx":371
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":372
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 v.svtype = "DUP"
 */
        __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":373
 *                 v.breakB = v.endB
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 v.svtype = "DUP"
 *                 v.join_type = "5to3"
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":372
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 v.svtype = "DUP"
 */
        }

        /* "dysgu/sv_category.pyx":374
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1
 *                 v.svtype = "DUP"             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to3"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_DUP);
        __Pyx_GIVEREF(__pyx_n_u_DUP);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_DUP;

        /* "dysgu/sv_category.pyx":375
 *                     v.breakB_precise = 1
 *                 v.svtype = "DUP"
 *                 v.join_type = "5to3"             # <<<<<<<<<<<<<<
 * 
 *             elif not v.left_clipA and not v.left_clipB:
 */
        __Pyx_INCREF(__pyx_kp_u_5to3);
        __Pyx_GIVEREF(__pyx_kp_u_5to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to3;

        /* "dysgu/sv_category.pyx":367
 *                     v.inferred_sv_len = ref_gap
 * 
 *             elif not v.right_clipA and not v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.posA
 *                 if v.left_clipA:
 */
        goto __pyx_L8;
      }

      /* "dysgu/sv_category.pyx":377
 *                 v.join_type = "5to3"
 * 
 *             elif not v.left_clipA and not v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 */
      __pyx_t_2 = (!(__pyx_v_v->left_clipA != 0));
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L23_bool_binop_done;
      }
      __pyx_t_2 = (!(__pyx_v_v->left_clipB != 0));
      __pyx_t_1 = __pyx_t_2;
      __pyx_L23_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":378
 * 
 *             elif not v.left_clipA and not v.left_clipB:
 *                 v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":379
 *             elif not v.left_clipA and not v.left_clipB:
 *                 v.breakA = v.endA
 *                 if v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 */
        __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":380
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB = v.endB
 *                 if v.right_clipB:
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":379
 *             elif not v.left_clipA and not v.left_clipB:
 *                 v.breakA = v.endA
 *                 if v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 */
        }

        /* "dysgu/sv_category.pyx":381
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":382
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 */
        __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":383
 *                 v.breakB = v.endB
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 v.join_type = "3to3"
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":382
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 */
        }

        /* "dysgu/sv_category.pyx":384
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "3to3"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":385
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 *                 v.join_type = "3to3"             # <<<<<<<<<<<<<<
 * 
 *             else:
 */
        __Pyx_INCREF(__pyx_kp_u_3to3);
        __Pyx_GIVEREF(__pyx_kp_u_3to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_3to3;

        /* "dysgu/sv_category.pyx":377
 *                 v.join_type = "5to3"
 * 
 *             elif not v.left_clipA and not v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 */
        goto __pyx_L8;
      }

      /* "dysgu/sv_category.pyx":388
 * 
 *             else:
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1
 */
      /*else*/ {
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":389
 *             else:
 *                 v.breakA = v.posA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB
 */
        __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":390
 *                 v.breakA = v.posA
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB = v.posB
 *                 if v.left_clipB:
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":389
 *             else:
 *                 v.breakA = v.posA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB
 */
        }

        /* "dysgu/sv_category.pyx":391
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 if v.left_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":392
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 */
        __pyx_t_1 = (__pyx_v_v->left_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":393
 *                 v.breakB = v.posB
 *                 if v.left_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 v.join_type = "5to5"
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":392
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 */
        }

        /* "dysgu/sv_category.pyx":394
 *                 if v.left_clipB:
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to5"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":395
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 *                 v.join_type = "5to5"             # <<<<<<<<<<<<<<
 * 
 *         elif v.strandA == 5 and v.strandB == 3:
 */
        __Pyx_INCREF(__pyx_kp_u_5to5);
        __Pyx_GIVEREF(__pyx_kp_u_5to5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to5;
      }
      __pyx_L8:;

      /* "dysgu/sv_category.pyx":298
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA <= v.endB):  # A is first
 * 
 *         if v.strandA == v.strandB:  # Same for 3 and 5 strand reads             # <<<<<<<<<<<<<<
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP
 */
      goto __pyx_L7;
    }

    /* "dysgu/sv_category.pyx":397
 *                 v.join_type = "5to5"
 * 
 *         elif v.strandA == 5 and v.strandB == 3:             # <<<<<<<<<<<<<<
 * 
 *             # Break right
 */
    __pyx_t_2 = (__pyx_v_v->strandA == 5);
    if (__pyx_t_2) {
    } else {
      __pyx_t_1 = __pyx_t_2;
      goto __pyx_L29_bool_binop_done;
    }
    __pyx_t_2 = (__pyx_v_v->strandB == 3);
    __pyx_t_1 = __pyx_t_2;
    __pyx_L29_bool_binop_done:;
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":400
 * 
 *             # Break right
 *             if not v.left_clipA and not v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 */
      __pyx_t_2 = (!(__pyx_v_v->left_clipA != 0));
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L32_bool_binop_done;
      }
      __pyx_t_2 = (!(__pyx_v_v->left_clipB != 0));
      __pyx_t_1 = __pyx_t_2;
      __pyx_L32_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":401
 *             # Break right
 *             if not v.left_clipA and not v.left_clipB:
 *                 v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":402
 *             if not v.left_clipA and not v.left_clipB:
 *                 v.breakA = v.endA
 *                 if v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 * 
 */
        __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":403
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                 v.breakB = v.endB
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":402
 *             if not v.left_clipA and not v.left_clipB:
 *                 v.breakA = v.endA
 *                 if v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 * 
 */
        }

        /* "dysgu/sv_category.pyx":405
 *                     v.breakA_precise = 1
 * 
 *                 v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":406
 * 
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":407
 *                 v.breakB = v.endB
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                 v.svtype = "INV"
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":406
 * 
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        }

        /* "dysgu/sv_category.pyx":409
 *                     v.breakB_precise = 1
 * 
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "3to3"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":410
 * 
 *                 v.svtype = "INV"
 *                 v.join_type = "3to3"             # <<<<<<<<<<<<<<
 * 
 *             # Break left
 */
        __Pyx_INCREF(__pyx_kp_u_3to3);
        __Pyx_GIVEREF(__pyx_kp_u_3to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_3to3;

        /* "dysgu/sv_category.pyx":400
 * 
 *             # Break right
 *             if not v.left_clipA and not v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 */
        goto __pyx_L31;
      }

      /* "dysgu/sv_category.pyx":413
 * 
 *             # Break left
 *             elif not v.right_clipA and not v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.posA
 *                 if v.left_clipA:
 */
      __pyx_t_2 = (!(__pyx_v_v->right_clipA != 0));
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L36_bool_binop_done;
      }
      __pyx_t_2 = (!(__pyx_v_v->right_clipB != 0));
      __pyx_t_1 = __pyx_t_2;
      __pyx_L36_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":414
 *             # Break left
 *             elif not v.right_clipA and not v.right_clipB:
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":415
 *             elif not v.right_clipA and not v.right_clipB:
 *                 v.breakA = v.posA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 * 
 */
        __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":416
 *                 v.breakA = v.posA
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                 v.breakB = v.posB
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":415
 *             elif not v.right_clipA and not v.right_clipB:
 *                 v.breakA = v.posA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 * 
 */
        }

        /* "dysgu/sv_category.pyx":418
 *                     v.breakA_precise = 1
 * 
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 if v.left_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":419
 * 
 *                 v.breakB = v.posB
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        __pyx_t_1 = (__pyx_v_v->left_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":420
 *                 v.breakB = v.posB
 *                 if v.left_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                 v.svtype = "INV"
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":419
 * 
 *                 v.breakB = v.posB
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        }

        /* "dysgu/sv_category.pyx":422
 *                     v.breakB_precise = 1
 * 
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to5"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":423
 * 
 *                 v.svtype = "INV"
 *                 v.join_type = "5to5"             # <<<<<<<<<<<<<<
 * 
 *             elif is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Inverted duplication
 */
        __Pyx_INCREF(__pyx_kp_u_5to5);
        __Pyx_GIVEREF(__pyx_kp_u_5to5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to5;

        /* "dysgu/sv_category.pyx":413
 * 
 *             # Break left
 *             elif not v.right_clipA and not v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.posA
 *                 if v.left_clipA:
 */
        goto __pyx_L31;
      }

      /* "dysgu/sv_category.pyx":425
 *                 v.join_type = "5to5"
 * 
 *             elif is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Inverted duplication             # <<<<<<<<<<<<<<
 *                 v.breakA = v.posA
 *                 if v.left_clipA:
 */
      __pyx_t_3 = __pyx_f_5dysgu_13map_set_utils_is_overlapping(__pyx_v_v->posA, __pyx_v_v->endA, __pyx_v_v->posB, __pyx_v_v->endB, 0); if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 425, __pyx_L1_error)
      __pyx_t_1 = (__pyx_t_3 != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":426
 * 
 *             elif is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Inverted duplication
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":427
 *             elif is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Inverted duplication
 *                 v.breakA = v.posA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 */
        __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":428
 *                 v.breakA = v.posA
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB = v.endB
 *                 if v.right_clipB:
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":427
 *             elif is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Inverted duplication
 *                 v.breakA = v.posA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 */
        }

        /* "dysgu/sv_category.pyx":429
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":430
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 v.svtype = "DUP"
 */
        __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":431
 *                 v.breakB = v.endB
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 v.svtype = "DUP"
 *                 v.join_type = "5to3"
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":430
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 v.svtype = "DUP"
 */
        }

        /* "dysgu/sv_category.pyx":432
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1
 *                 v.svtype = "DUP"             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to3"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_DUP);
        __Pyx_GIVEREF(__pyx_n_u_DUP);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_DUP;

        /* "dysgu/sv_category.pyx":433
 *                     v.breakB_precise = 1
 *                 v.svtype = "DUP"
 *                 v.join_type = "5to3"             # <<<<<<<<<<<<<<
 * 
 *             elif v.right_clipA and v.left_clipB:
 */
        __Pyx_INCREF(__pyx_kp_u_5to3);
        __Pyx_GIVEREF(__pyx_kp_u_5to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to3;

        /* "dysgu/sv_category.pyx":425
 *                 v.join_type = "5to5"
 * 
 *             elif is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Inverted duplication             # <<<<<<<<<<<<<<
 *                 v.breakA = v.posA
 *                 if v.left_clipA:
 */
        goto __pyx_L31;
      }

      /* "dysgu/sv_category.pyx":435
 *                 v.join_type = "5to3"
 * 
 *             elif v.right_clipA and v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 v.breakB = v.posB
 */
      __pyx_t_2 = (__pyx_v_v->right_clipA != 0);
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L42_bool_binop_done;
      }
      __pyx_t_2 = (__pyx_v_v->left_clipB != 0);
      __pyx_t_1 = __pyx_t_2;
      __pyx_L42_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":436
 * 
 *             elif v.right_clipA and v.left_clipB:
 *                 v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"
 */
        __pyx_t_3 = __pyx_v_v->endA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":437
 *             elif v.right_clipA and v.left_clipB:
 *                 v.breakA = v.endA
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 v.join_type = "3to5"
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":438
 *                 v.breakA = v.endA
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "3to5"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":439
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"
 *                 v.join_type = "3to5"             # <<<<<<<<<<<<<<
 * 
 *             else:
 */
        __Pyx_INCREF(__pyx_kp_u_3to5);
        __Pyx_GIVEREF(__pyx_kp_u_3to5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_3to5;

        /* "dysgu/sv_category.pyx":435
 *                 v.join_type = "5to3"
 * 
 *             elif v.right_clipA and v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 v.breakB = v.posB
 */
        goto __pyx_L31;
      }

      /* "dysgu/sv_category.pyx":443
 *             else:
 *             # elif v.left_clipA and v.right_clipB:
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 v.breakB = v.endB
 *                 v.svtype = "INV"
 */
      /*else*/ {
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":444
 *             # elif v.left_clipA and v.right_clipB:
 *                 v.breakA = v.posA
 *                 v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 v.join_type = "5to3"
 */
        __pyx_t_3 = __pyx_v_v->endB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":445
 *                 v.breakA = v.posA
 *                 v.breakB = v.endB
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to3"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":446
 *                 v.breakB = v.endB
 *                 v.svtype = "INV"
 *                 v.join_type = "5to3"             # <<<<<<<<<<<<<<
 * 
 *         else:  # INV type
 */
        __Pyx_INCREF(__pyx_kp_u_5to3);
        __Pyx_GIVEREF(__pyx_kp_u_5to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to3;
      }
      __pyx_L31:;

      /* "dysgu/sv_category.pyx":397
 *                 v.join_type = "5to5"
 * 
 *         elif v.strandA == 5 and v.strandB == 3:             # <<<<<<<<<<<<<<
 * 
 *             # Break right
 */
      goto __pyx_L7;
    }

    /* "dysgu/sv_category.pyx":450
 *         else:  # INV type
 *             # Break left
 *             if v.left_clipA and v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 */
    /*else*/ {
      __pyx_t_2 = (__pyx_v_v->left_clipA != 0);
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L45_bool_binop_done;
      }
      __pyx_t_2 = (__pyx_v_v->left_clipB != 0);
      __pyx_t_1 = __pyx_t_2;
      __pyx_L45_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":451
 *             # Break left
 *             if v.left_clipA and v.left_clipB:
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 *                 v.breakA = v.posA
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":452
 *             if v.left_clipA and v.left_clipB:
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakA = v.posA
 *                 v.breakB = v.posB
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":453
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"
 */
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":454
 *                 v.breakB_precise = 1
 *                 v.breakA = v.posA
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 v.join_type = "5to5"
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":455
 *                 v.breakA = v.posA
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to5"
 *             # Break right
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":456
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"
 *                 v.join_type = "5to5"             # <<<<<<<<<<<<<<
 *             # Break right
 *             elif v.right_clipA and v.right_clipB:
 */
        __Pyx_INCREF(__pyx_kp_u_5to5);
        __Pyx_GIVEREF(__pyx_kp_u_5to5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to5;

        /* "dysgu/sv_category.pyx":450
 *         else:  # INV type
 *             # Break left
 *             if v.left_clipA and v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 */
        goto __pyx_L44;
      }

      /* "dysgu/sv_category.pyx":458
 *                 v.join_type = "5to5"
 *             # Break right
 *             elif v.right_clipA and v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 v.breakB = v.endB
 */
      __pyx_t_2 = (__pyx_v_v->right_clipA != 0);
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L47_bool_binop_done;
      }
      __pyx_t_2 = (__pyx_v_v->right_clipB != 0);
      __pyx_t_1 = __pyx_t_2;
      __pyx_L47_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":459
 *             # Break right
 *             elif v.right_clipA and v.right_clipB:
 *                 v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                 v.breakB = v.endB
 *                 v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":460
 *             elif v.right_clipA and v.right_clipB:
 *                 v.breakA = v.endA
 *                 v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":461
 *                 v.breakA = v.endA
 *                 v.breakB = v.endB
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 *                 v.svtype = "INV"
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":462
 *                 v.breakB = v.endB
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 v.join_type = "3to3"
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":463
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "3to3"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":464
 *                 v.breakB_precise = 1
 *                 v.svtype = "INV"
 *                 v.join_type = "3to3"             # <<<<<<<<<<<<<<
 * 
 *             else:  # Guess using pos only
 */
        __Pyx_INCREF(__pyx_kp_u_3to3);
        __Pyx_GIVEREF(__pyx_kp_u_3to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_3to3;

        /* "dysgu/sv_category.pyx":458
 *                 v.join_type = "5to5"
 *             # Break right
 *             elif v.right_clipA and v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 v.breakB = v.endB
 */
        goto __pyx_L44;
      }

      /* "dysgu/sv_category.pyx":467
 * 
 *             else:  # Guess using pos only
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"
 */
      /*else*/ {
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":468
 *             else:  # Guess using pos only
 *                 v.breakA = v.posA
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 if v.strandA == 5:
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":469
 *                 v.breakA = v.posA
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 if v.strandA == 5:
 *                     v.join_type = "5to5"
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":470
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"
 *                 if v.strandA == 5:             # <<<<<<<<<<<<<<
 *                     v.join_type = "5to5"
 *                 else:
 */
        __pyx_t_1 = (__pyx_v_v->strandA == 5);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":471
 *                 v.svtype = "INV"
 *                 if v.strandA == 5:
 *                     v.join_type = "5to5"             # <<<<<<<<<<<<<<
 *                 else:
 *                     v.join_type = "3to3"
 */
          __Pyx_INCREF(__pyx_kp_u_5to5);
          __Pyx_GIVEREF(__pyx_kp_u_5to5);
          __Pyx_GOTREF(__pyx_v_v->join_type);
          __Pyx_DECREF(__pyx_v_v->join_type);
          __pyx_v_v->join_type = __pyx_kp_u_5to5;

          /* "dysgu/sv_category.pyx":470
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"
 *                 if v.strandA == 5:             # <<<<<<<<<<<<<<
 *                     v.join_type = "5to5"
 *                 else:
 */
          goto __pyx_L49;
        }

        /* "dysgu/sv_category.pyx":473
 *                     v.join_type = "5to5"
 *                 else:
 *                     v.join_type = "3to3"             # <<<<<<<<<<<<<<
 * 
 *     # B is first or B == A
 */
        /*else*/ {
          __Pyx_INCREF(__pyx_kp_u_3to3);
          __Pyx_GIVEREF(__pyx_kp_u_3to3);
          __Pyx_GOTREF(__pyx_v_v->join_type);
          __Pyx_DECREF(__pyx_v_v->join_type);
          __pyx_v_v->join_type = __pyx_kp_u_3to3;
        }
        __pyx_L49:;
      }
      __pyx_L44:;
    }
    __pyx_L7:;

    /* "dysgu/sv_category.pyx":296
 *     cdef int inferred_sv_len = -1
 * 
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA <= v.endB):  # A is first             # <<<<<<<<<<<<<<
 * 
 *         if v.strandA == v.strandB:  # Same for 3 and 5 strand reads
 */
    goto __pyx_L3;
  }

  /* "dysgu/sv_category.pyx":478
 *     else:
 * 
 *         if v.strandA == v.strandB:             # <<<<<<<<<<<<<<
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP
 */
  /*else*/ {
    __pyx_t_1 = (__pyx_v_v->strandA == __pyx_v_v->strandB);
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":480
 *         if v.strandA == v.strandB:
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP             # <<<<<<<<<<<<<<
 *                 if v.left_clipA:
 *                     v.breakA = v.posA
 */
      __pyx_t_3 = __pyx_f_5dysgu_13map_set_utils_is_overlapping(__pyx_v_v->posA, __pyx_v_v->endA, __pyx_v_v->posB, __pyx_v_v->endB, 0); if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 480, __pyx_L1_error)
      __pyx_t_1 = (__pyx_t_3 != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":481
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA = v.posA
 *                     v.breakA_precise = 1
 */
        __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":482
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP
 *                 if v.left_clipA:
 *                     v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 elif v.right_clipA:
 */
          __pyx_t_3 = __pyx_v_v->posA;
          __pyx_v_v->breakA = __pyx_t_3;

          /* "dysgu/sv_category.pyx":483
 *                 if v.left_clipA:
 *                     v.breakA = v.posA
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 elif v.right_clipA:
 *                     v.breakA = v.endA
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":481
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA = v.posA
 *                     v.breakA_precise = 1
 */
          goto __pyx_L52;
        }

        /* "dysgu/sv_category.pyx":484
 *                     v.breakA = v.posA
 *                     v.breakA_precise = 1
 *                 elif v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA = v.endA
 *                     v.breakA_precise = 1
 */
        __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":485
 *                     v.breakA_precise = 1
 *                 elif v.right_clipA:
 *                     v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 else:
 */
          __pyx_t_3 = __pyx_v_v->endA;
          __pyx_v_v->breakA = __pyx_t_3;

          /* "dysgu/sv_category.pyx":486
 *                 elif v.right_clipA:
 *                     v.breakA = v.endA
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 else:
 *                     v.breakA = v.endA
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":484
 *                     v.breakA = v.posA
 *                     v.breakA_precise = 1
 *                 elif v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA = v.endA
 *                     v.breakA_precise = 1
 */
          goto __pyx_L52;
        }

        /* "dysgu/sv_category.pyx":488
 *                     v.breakA_precise = 1
 *                 else:
 *                     v.breakA = v.endA             # <<<<<<<<<<<<<<
 * 
 *                 if v.left_clipB:
 */
        /*else*/ {
          __pyx_t_3 = __pyx_v_v->endA;
          __pyx_v_v->breakA = __pyx_t_3;
        }
        __pyx_L52:;

        /* "dysgu/sv_category.pyx":490
 *                     v.breakA = v.endA
 * 
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB = v.posB
 *                     v.breakB_precise = 1
 */
        __pyx_t_1 = (__pyx_v_v->left_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":491
 * 
 *                 if v.left_clipB:
 *                     v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 elif v.right_clipB:
 */
          __pyx_t_3 = __pyx_v_v->posB;
          __pyx_v_v->breakB = __pyx_t_3;

          /* "dysgu/sv_category.pyx":492
 *                 if v.left_clipB:
 *                     v.breakB = v.posB
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 elif v.right_clipB:
 *                     v.breakB = v.endB
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":490
 *                     v.breakA = v.endA
 * 
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB = v.posB
 *                     v.breakB_precise = 1
 */
          goto __pyx_L53;
        }

        /* "dysgu/sv_category.pyx":493
 *                     v.breakB = v.posB
 *                     v.breakB_precise = 1
 *                 elif v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB = v.endB
 *                     v.breakB_precise = 1
 */
        __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":494
 *                     v.breakB_precise = 1
 *                 elif v.right_clipB:
 *                     v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 else:
 */
          __pyx_t_3 = __pyx_v_v->endB;
          __pyx_v_v->breakB = __pyx_t_3;

          /* "dysgu/sv_category.pyx":495
 *                 elif v.right_clipB:
 *                     v.breakB = v.endB
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 else:
 *                     v.breakB = v.endB
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":493
 *                     v.breakB = v.posB
 *                     v.breakB_precise = 1
 *                 elif v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB = v.endB
 *                     v.breakB_precise = 1
 */
          goto __pyx_L53;
        }

        /* "dysgu/sv_category.pyx":497
 *                     v.breakB_precise = 1
 *                 else:
 *                     v.breakB = v.endB             # <<<<<<<<<<<<<<
 * 
 *                 v.svtype = "INS"
 */
        /*else*/ {
          __pyx_t_3 = __pyx_v_v->endB;
          __pyx_v_v->breakB = __pyx_t_3;
        }
        __pyx_L53:;

        /* "dysgu/sv_category.pyx":499
 *                     v.breakB = v.endB
 * 
 *                 v.svtype = "INS"             # <<<<<<<<<<<<<<
 *                 # Check if gap on query is bigger than gap on reference
 *                 ref_gap = abs(v.breakA - v.breakB)
 */
        __Pyx_INCREF(__pyx_n_u_INS);
        __Pyx_GIVEREF(__pyx_n_u_INS);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INS;

        /* "dysgu/sv_category.pyx":501
 *                 v.svtype = "INS"
 *                 # Check if gap on query is bigger than gap on reference
 *                 ref_gap = abs(v.breakA - v.breakB)             # <<<<<<<<<<<<<<
 * 
 *                 if v.a_qstart > v.b_qstart:  # B is first on query seq
 */
        __pyx_t_3 = abs((__pyx_v_v->breakA - __pyx_v_v->breakB)); if (unlikely(__pyx_t_3 == ((int)-1))) __PYX_ERR(2, 501, __pyx_L1_error)
        __pyx_v_ref_gap = __pyx_t_3;

        /* "dysgu/sv_category.pyx":503
 *                 ref_gap = abs(v.breakA - v.breakB)
 * 
 *                 if v.a_qstart > v.b_qstart:  # B is first on query seq             # <<<<<<<<<<<<<<
 *                     align_overlap = v.b_qend - v.a_qstart  # note, this is negative if there is a gap between alignments
 *                 else:
 */
        __pyx_t_1 = (__pyx_v_v->a_qstart > __pyx_v_v->b_qstart);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":504
 * 
 *                 if v.a_qstart > v.b_qstart:  # B is first on query seq
 *                     align_overlap = v.b_qend - v.a_qstart  # note, this is negative if there is a gap between alignments             # <<<<<<<<<<<<<<
 *                 else:
 *                     align_overlap = v.a_qend - v.b_qstart
 */
          __pyx_t_5 = __Pyx_PyInt_From_int((__pyx_v_v->b_qend - __pyx_v_v->a_qstart)); if (unlikely(!__pyx_t_5)) __PYX_ERR(2, 504, __pyx_L1_error)
          __Pyx_GOTREF(__pyx_t_5);
          __pyx_v_align_overlap = __pyx_t_5;
          __pyx_t_5 = 0;

          /* "dysgu/sv_category.pyx":503
 *                 ref_gap = abs(v.breakA - v.breakB)
 * 
 *                 if v.a_qstart > v.b_qstart:  # B is first on query seq             # <<<<<<<<<<<<<<
 *                     align_overlap = v.b_qend - v.a_qstart  # note, this is negative if there is a gap between alignments
 *                 else:
 */
          goto __pyx_L54;
        }

        /* "dysgu/sv_category.pyx":506
 *                     align_overlap = v.b_qend - v.a_qstart  # note, this is negative if there is a gap between alignments
 *                 else:
 *                     align_overlap = v.a_qend - v.b_qstart             # <<<<<<<<<<<<<<
 * 
 *                 v.inferred_sv_len = ref_gap - align_overlap
 */
        /*else*/ {
          __pyx_t_5 = __Pyx_PyInt_From_int((__pyx_v_v->a_qend - __pyx_v_v->b_qstart)); if (unlikely(!__pyx_t_5)) __PYX_ERR(2, 506, __pyx_L1_error)
          __Pyx_GOTREF(__pyx_t_5);
          __pyx_v_align_overlap = __pyx_t_5;
          __pyx_t_5 = 0;
        }
        __pyx_L54:;

        /* "dysgu/sv_category.pyx":508
 *                     align_overlap = v.a_qend - v.b_qstart
 * 
 *                 v.inferred_sv_len = ref_gap - align_overlap             # <<<<<<<<<<<<<<
 * 
 *                 if align_overlap < 0:
 */
        __pyx_t_5 = __Pyx_PyInt_From_int(__pyx_v_ref_gap); if (unlikely(!__pyx_t_5)) __PYX_ERR(2, 508, __pyx_L1_error)
        __Pyx_GOTREF(__pyx_t_5);
        __pyx_t_4 = PyNumber_Subtract(__pyx_t_5, __pyx_v_align_overlap); if (unlikely(!__pyx_t_4)) __PYX_ERR(2, 508, __pyx_L1_error)
        __Pyx_GOTREF(__pyx_t_4);
        __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
        __pyx_t_3 = __Pyx_PyInt_As_int(__pyx_t_4); if (unlikely((__pyx_t_3 == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 508, __pyx_L1_error)
        __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
        __pyx_v_v->inferred_sv_len = __pyx_t_3;

        /* "dysgu/sv_category.pyx":510
 *                 v.inferred_sv_len = ref_gap - align_overlap
 * 
 *                 if align_overlap < 0:             # <<<<<<<<<<<<<<
 *                     v.query_gap = align_overlap
 *                 else:
 */
        __pyx_t_4 = PyObject_RichCompare(__pyx_v_align_overlap, __pyx_int_0, Py_LT); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) __PYX_ERR(2, 510, __pyx_L1_error)
        __pyx_t_1 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely((__pyx_t_1 < 0))) __PYX_ERR(2, 510, __pyx_L1_error)
        __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":511
 * 
 *                 if align_overlap < 0:
 *                     v.query_gap = align_overlap             # <<<<<<<<<<<<<<
 *                 else:
 *                     v.query_overlap = align_overlap
 */
          __pyx_t_3 = __Pyx_PyInt_As_int(__pyx_v_align_overlap); if (unlikely((__pyx_t_3 == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 511, __pyx_L1_error)
          __pyx_v_v->query_gap = __pyx_t_3;

          /* "dysgu/sv_category.pyx":510
 *                 v.inferred_sv_len = ref_gap - align_overlap
 * 
 *                 if align_overlap < 0:             # <<<<<<<<<<<<<<
 *                     v.query_gap = align_overlap
 *                 else:
 */
          goto __pyx_L55;
        }

        /* "dysgu/sv_category.pyx":513
 *                     v.query_gap = align_overlap
 *                 else:
 *                     v.query_overlap = align_overlap             # <<<<<<<<<<<<<<
 * 
 *                 v.join_type = "5to3"
 */
        /*else*/ {
          __pyx_t_3 = __Pyx_PyInt_As_int(__pyx_v_align_overlap); if (unlikely((__pyx_t_3 == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 513, __pyx_L1_error)
          __pyx_v_v->query_overlap = __pyx_t_3;
        }
        __pyx_L55:;

        /* "dysgu/sv_category.pyx":515
 *                     v.query_overlap = align_overlap
 * 
 *                 v.join_type = "5to3"             # <<<<<<<<<<<<<<
 * 
 *             elif not v.left_clipB and not v.right_clipA:
 */
        __Pyx_INCREF(__pyx_kp_u_5to3);
        __Pyx_GIVEREF(__pyx_kp_u_5to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to3;

        /* "dysgu/sv_category.pyx":480
 *         if v.strandA == v.strandB:
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP             # <<<<<<<<<<<<<<
 *                 if v.left_clipA:
 *                     v.breakA = v.posA
 */
        goto __pyx_L51;
      }

      /* "dysgu/sv_category.pyx":517
 *                 v.join_type = "5to3"
 * 
 *             elif not v.left_clipB and not v.right_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.posA
 *                 v.breakB = v.endB
 */
      __pyx_t_2 = (!(__pyx_v_v->left_clipB != 0));
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L56_bool_binop_done;
      }
      __pyx_t_2 = (!(__pyx_v_v->right_clipA != 0));
      __pyx_t_1 = __pyx_t_2;
      __pyx_L56_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":518
 * 
 *             elif not v.left_clipB and not v.right_clipA:
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 v.breakB = v.endB
 *                 v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":519
 *             elif not v.left_clipB and not v.right_clipA:
 *                 v.breakA = v.posA
 *                 v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":520
 *                 v.breakA = v.posA
 *                 v.breakB = v.endB
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":521
 *                 v.breakB = v.endB
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                 # Check if gap on query is bigger than gap on reference; call insertion if it is
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":524
 * 
 *                 # Check if gap on query is bigger than gap on reference; call insertion if it is
 *                 query_gap = v.b_qend - v.a_qstart  # as B is first             # <<<<<<<<<<<<<<
 *                 ref_gap = abs(v.breakA - v.breakB)
 * 
 */
        __pyx_v_query_gap = (__pyx_v_v->b_qend - __pyx_v_v->a_qstart);

        /* "dysgu/sv_category.pyx":525
 *                 # Check if gap on query is bigger than gap on reference; call insertion if it is
 *                 query_gap = v.b_qend - v.a_qstart  # as B is first
 *                 ref_gap = abs(v.breakA - v.breakB)             # <<<<<<<<<<<<<<
 * 
 *                 if query_gap < 0:
 */
        __pyx_t_3 = abs((__pyx_v_v->breakA - __pyx_v_v->breakB)); if (unlikely(__pyx_t_3 == ((int)-1))) __PYX_ERR(2, 525, __pyx_L1_error)
        __pyx_v_ref_gap = __pyx_t_3;

        /* "dysgu/sv_category.pyx":527
 *                 ref_gap = abs(v.breakA - v.breakB)
 * 
 *                 if query_gap < 0:             # <<<<<<<<<<<<<<
 *                     ref_gap += abs(query_gap)
 *                     v.query_overlap = abs(query_gap)
 */
        __pyx_t_1 = (__pyx_v_query_gap < 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":528
 * 
 *                 if query_gap < 0:
 *                     ref_gap += abs(query_gap)             # <<<<<<<<<<<<<<
 *                     v.query_overlap = abs(query_gap)
 *                     v.query_gap = 0
 */
          __pyx_t_3 = abs(__pyx_v_query_gap); if (unlikely(__pyx_t_3 == ((int)-1))) __PYX_ERR(2, 528, __pyx_L1_error)
          __pyx_v_ref_gap = (__pyx_v_ref_gap + __pyx_t_3);

          /* "dysgu/sv_category.pyx":529
 *                 if query_gap < 0:
 *                     ref_gap += abs(query_gap)
 *                     v.query_overlap = abs(query_gap)             # <<<<<<<<<<<<<<
 *                     v.query_gap = 0
 * 
 */
          __pyx_t_3 = abs(__pyx_v_query_gap); if (unlikely(__pyx_t_3 == ((int)-1))) __PYX_ERR(2, 529, __pyx_L1_error)
          __pyx_v_v->query_overlap = __pyx_t_3;

          /* "dysgu/sv_category.pyx":530
 *                     ref_gap += abs(query_gap)
 *                     v.query_overlap = abs(query_gap)
 *                     v.query_gap = 0             # <<<<<<<<<<<<<<
 * 
 *                 else:
 */
          __pyx_v_v->query_gap = 0;

          /* "dysgu/sv_category.pyx":527
 *                 ref_gap = abs(v.breakA - v.breakB)
 * 
 *                 if query_gap < 0:             # <<<<<<<<<<<<<<
 *                     ref_gap += abs(query_gap)
 *                     v.query_overlap = abs(query_gap)
 */
          goto __pyx_L58;
        }

        /* "dysgu/sv_category.pyx":533
 * 
 *                 else:
 *                     v.query_overlap = 0             # <<<<<<<<<<<<<<
 *                     v.query_gap = query_gap
 * 
 */
        /*else*/ {
          __pyx_v_v->query_overlap = 0;

          /* "dysgu/sv_category.pyx":534
 *                 else:
 *                     v.query_overlap = 0
 *                     v.query_gap = query_gap             # <<<<<<<<<<<<<<
 * 
 *                 if ref_gap < query_gap:
 */
          __pyx_v_v->query_gap = __pyx_v_query_gap;
        }
        __pyx_L58:;

        /* "dysgu/sv_category.pyx":536
 *                     v.query_gap = query_gap
 * 
 *                 if ref_gap < query_gap:             # <<<<<<<<<<<<<<
 *                     v.svtype = "INS"
 *                     v.join_type = "3to5"
 */
        __pyx_t_1 = (__pyx_v_ref_gap < __pyx_v_query_gap);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":537
 * 
 *                 if ref_gap < query_gap:
 *                     v.svtype = "INS"             # <<<<<<<<<<<<<<
 *                     v.join_type = "3to5"
 *                     v.inferred_sv_len = query_gap
 */
          __Pyx_INCREF(__pyx_n_u_INS);
          __Pyx_GIVEREF(__pyx_n_u_INS);
          __Pyx_GOTREF(__pyx_v_v->svtype);
          __Pyx_DECREF(__pyx_v_v->svtype);
          __pyx_v_v->svtype = __pyx_n_u_INS;

          /* "dysgu/sv_category.pyx":538
 *                 if ref_gap < query_gap:
 *                     v.svtype = "INS"
 *                     v.join_type = "3to5"             # <<<<<<<<<<<<<<
 *                     v.inferred_sv_len = query_gap
 * 
 */
          __Pyx_INCREF(__pyx_kp_u_3to5);
          __Pyx_GIVEREF(__pyx_kp_u_3to5);
          __Pyx_GOTREF(__pyx_v_v->join_type);
          __Pyx_DECREF(__pyx_v_v->join_type);
          __pyx_v_v->join_type = __pyx_kp_u_3to5;

          /* "dysgu/sv_category.pyx":539
 *                     v.svtype = "INS"
 *                     v.join_type = "3to5"
 *                     v.inferred_sv_len = query_gap             # <<<<<<<<<<<<<<
 * 
 *                 elif v.read_overlaps_mate:
 */
          __pyx_v_v->inferred_sv_len = __pyx_v_query_gap;

          /* "dysgu/sv_category.pyx":536
 *                     v.query_gap = query_gap
 * 
 *                 if ref_gap < query_gap:             # <<<<<<<<<<<<<<
 *                     v.svtype = "INS"
 *                     v.join_type = "3to5"
 */
          goto __pyx_L59;
        }

        /* "dysgu/sv_category.pyx":541
 *                     v.inferred_sv_len = query_gap
 * 
 *                 elif v.read_overlaps_mate:             # <<<<<<<<<<<<<<
 *                     v.svtype = "DUP"
 *                     v.join_type = "5to3"
 */
        __pyx_t_1 = (__pyx_v_v->read_overlaps_mate != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":542
 * 
 *                 elif v.read_overlaps_mate:
 *                     v.svtype = "DUP"             # <<<<<<<<<<<<<<
 *                     v.join_type = "5to3"
 *                 else:
 */
          __Pyx_INCREF(__pyx_n_u_DUP);
          __Pyx_GIVEREF(__pyx_n_u_DUP);
          __Pyx_GOTREF(__pyx_v_v->svtype);
          __Pyx_DECREF(__pyx_v_v->svtype);
          __pyx_v_v->svtype = __pyx_n_u_DUP;

          /* "dysgu/sv_category.pyx":543
 *                 elif v.read_overlaps_mate:
 *                     v.svtype = "DUP"
 *                     v.join_type = "5to3"             # <<<<<<<<<<<<<<
 *                 else:
 *                     v.svtype = "DEL"
 */
          __Pyx_INCREF(__pyx_kp_u_5to3);
          __Pyx_GIVEREF(__pyx_kp_u_5to3);
          __Pyx_GOTREF(__pyx_v_v->join_type);
          __Pyx_DECREF(__pyx_v_v->join_type);
          __pyx_v_v->join_type = __pyx_kp_u_5to3;

          /* "dysgu/sv_category.pyx":541
 *                     v.inferred_sv_len = query_gap
 * 
 *                 elif v.read_overlaps_mate:             # <<<<<<<<<<<<<<
 *                     v.svtype = "DUP"
 *                     v.join_type = "5to3"
 */
          goto __pyx_L59;
        }

        /* "dysgu/sv_category.pyx":545
 *                     v.join_type = "5to3"
 *                 else:
 *                     v.svtype = "DEL"             # <<<<<<<<<<<<<<
 *                     v.join_type = "3to5"
 *                     v.inferred_sv_len = ref_gap
 */
        /*else*/ {
          __Pyx_INCREF(__pyx_n_u_DEL);
          __Pyx_GIVEREF(__pyx_n_u_DEL);
          __Pyx_GOTREF(__pyx_v_v->svtype);
          __Pyx_DECREF(__pyx_v_v->svtype);
          __pyx_v_v->svtype = __pyx_n_u_DEL;

          /* "dysgu/sv_category.pyx":546
 *                 else:
 *                     v.svtype = "DEL"
 *                     v.join_type = "3to5"             # <<<<<<<<<<<<<<
 *                     v.inferred_sv_len = ref_gap
 * 
 */
          __Pyx_INCREF(__pyx_kp_u_3to5);
          __Pyx_GIVEREF(__pyx_kp_u_3to5);
          __Pyx_GOTREF(__pyx_v_v->join_type);
          __Pyx_DECREF(__pyx_v_v->join_type);
          __pyx_v_v->join_type = __pyx_kp_u_3to5;

          /* "dysgu/sv_category.pyx":547
 *                     v.svtype = "DEL"
 *                     v.join_type = "3to5"
 *                     v.inferred_sv_len = ref_gap             # <<<<<<<<<<<<<<
 * 
 *             elif not v.right_clipB and not v.left_clipA:
 */
          __pyx_v_v->inferred_sv_len = __pyx_v_ref_gap;
        }
        __pyx_L59:;

        /* "dysgu/sv_category.pyx":517
 *                 v.join_type = "5to3"
 * 
 *             elif not v.left_clipB and not v.right_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.posA
 *                 v.breakB = v.endB
 */
        goto __pyx_L51;
      }

      /* "dysgu/sv_category.pyx":549
 *                     v.inferred_sv_len = ref_gap
 * 
 *             elif not v.right_clipB and not v.left_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 v.breakB = v.posB
 */
      __pyx_t_2 = (!(__pyx_v_v->right_clipB != 0));
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L60_bool_binop_done;
      }
      __pyx_t_2 = (!(__pyx_v_v->left_clipA != 0));
      __pyx_t_1 = __pyx_t_2;
      __pyx_L60_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":550
 * 
 *             elif not v.right_clipB and not v.left_clipA:
 *                 v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                 v.breakB = v.posB
 *                 v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":551
 *             elif not v.right_clipB and not v.left_clipA:
 *                 v.breakA = v.endA
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":552
 *                 v.breakA = v.endA
 *                 v.breakB = v.posB
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 *                 v.svtype = "DUP"
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":553
 *                 v.breakB = v.posB
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 v.svtype = "DUP"
 *                 v.join_type = "5to3"
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":554
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 *                 v.svtype = "DUP"             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to3"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_DUP);
        __Pyx_GIVEREF(__pyx_n_u_DUP);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_DUP;

        /* "dysgu/sv_category.pyx":555
 *                 v.breakB_precise = 1
 *                 v.svtype = "DUP"
 *                 v.join_type = "5to3"             # <<<<<<<<<<<<<<
 * 
 *             else:
 */
        __Pyx_INCREF(__pyx_kp_u_5to3);
        __Pyx_GIVEREF(__pyx_kp_u_5to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to3;

        /* "dysgu/sv_category.pyx":549
 *                     v.inferred_sv_len = ref_gap
 * 
 *             elif not v.right_clipB and not v.left_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 v.breakB = v.posB
 */
        goto __pyx_L51;
      }

      /* "dysgu/sv_category.pyx":558
 * 
 *             else:
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 v.breakB = v.posB
 *                 v.svtype = "BND"
 */
      /*else*/ {
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":559
 *             else:
 *                 v.breakA = v.posA
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 v.svtype = "BND"
 *                 v.join_type = f"{v.strandA}to{v.strandB}"
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":560
 *                 v.breakA = v.posA
 *                 v.breakB = v.posB
 *                 v.svtype = "BND"             # <<<<<<<<<<<<<<
 *                 v.join_type = f"{v.strandA}to{v.strandB}"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_BND);
        __Pyx_GIVEREF(__pyx_n_u_BND);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_BND;

        /* "dysgu/sv_category.pyx":561
 *                 v.breakB = v.posB
 *                 v.svtype = "BND"
 *                 v.join_type = f"{v.strandA}to{v.strandB}"             # <<<<<<<<<<<<<<
 * 
 *         else:  # INV type
 */
        __pyx_t_4 = PyTuple_New(3); if (unlikely(!__pyx_t_4)) __PYX_ERR(2, 561, __pyx_L1_error)
        __Pyx_GOTREF(__pyx_t_4);
        __pyx_t_6 = 0;
        __pyx_t_7 = 127;
        __pyx_t_5 = __Pyx_PyUnicode_From_int(__pyx_v_v->strandA, 0, ' ', 'd'); if (unlikely(!__pyx_t_5)) __PYX_ERR(2, 561, __pyx_L1_error)
        __Pyx_GOTREF(__pyx_t_5);
        __pyx_t_6 += __Pyx_PyUnicode_GET_LENGTH(__pyx_t_5);
        __Pyx_GIVEREF(__pyx_t_5);
        PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_t_5);
        __pyx_t_5 = 0;
        __Pyx_INCREF(__pyx_n_u_to);
        __pyx_t_6 += 2;
        __Pyx_GIVEREF(__pyx_n_u_to);
        PyTuple_SET_ITEM(__pyx_t_4, 1, __pyx_n_u_to);
        __pyx_t_5 = __Pyx_PyUnicode_From_int(__pyx_v_v->strandB, 0, ' ', 'd'); if (unlikely(!__pyx_t_5)) __PYX_ERR(2, 561, __pyx_L1_error)
        __Pyx_GOTREF(__pyx_t_5);
        __pyx_t_6 += __Pyx_PyUnicode_GET_LENGTH(__pyx_t_5);
        __Pyx_GIVEREF(__pyx_t_5);
        PyTuple_SET_ITEM(__pyx_t_4, 2, __pyx_t_5);
        __pyx_t_5 = 0;
        __pyx_t_5 = __Pyx_PyUnicode_Join(__pyx_t_4, 3, __pyx_t_6, __pyx_t_7); if (unlikely(!__pyx_t_5)) __PYX_ERR(2, 561, __pyx_L1_error)
        __Pyx_GOTREF(__pyx_t_5);
        __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
        __Pyx_GIVEREF(__pyx_t_5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = ((PyObject*)__pyx_t_5);
        __pyx_t_5 = 0;
      }
      __pyx_L51:;

      /* "dysgu/sv_category.pyx":478
 *     else:
 * 
 *         if v.strandA == v.strandB:             # <<<<<<<<<<<<<<
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP
 */
      goto __pyx_L50;
    }

    /* "dysgu/sv_category.pyx":565
 *         else:  # INV type
 *             # Break left
 *             if v.left_clipA and v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 */
    /*else*/ {
      __pyx_t_2 = (__pyx_v_v->left_clipA != 0);
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L63_bool_binop_done;
      }
      __pyx_t_2 = (__pyx_v_v->left_clipB != 0);
      __pyx_t_1 = __pyx_t_2;
      __pyx_L63_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":566
 *             # Break left
 *             if v.left_clipA and v.left_clipB:
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 *                 v.breakA = v.posA
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":567
 *             if v.left_clipA and v.left_clipB:
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakA = v.posA
 *                 v.breakB = v.posB
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":568
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"
 */
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":569
 *                 v.breakB_precise = 1
 *                 v.breakA = v.posA
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 v.join_type = "5to5"
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":570
 *                 v.breakA = v.posA
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to5"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":571
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"
 *                 v.join_type = "5to5"             # <<<<<<<<<<<<<<
 * 
 *             # Break right
 */
        __Pyx_INCREF(__pyx_kp_u_5to5);
        __Pyx_GIVEREF(__pyx_kp_u_5to5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to5;

        /* "dysgu/sv_category.pyx":565
 *         else:  # INV type
 *             # Break left
 *             if v.left_clipA and v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 */
        goto __pyx_L62;
      }

      /* "dysgu/sv_category.pyx":574
 * 
 *             # Break right
 *             elif v.right_clipA and v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 */
      __pyx_t_2 = (__pyx_v_v->right_clipA != 0);
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L65_bool_binop_done;
      }
      __pyx_t_2 = (__pyx_v_v->right_clipB != 0);
      __pyx_t_1 = __pyx_t_2;
      __pyx_L65_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":575
 *             # Break right
 *             elif v.right_clipA and v.right_clipB:
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 *                 v.breakA = v.endA
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":576
 *             elif v.right_clipA and v.right_clipB:
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 v.breakB = v.endB
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":577
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 *                 v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                 v.breakB = v.endB
 *                 v.svtype = "INV"
 */
        __pyx_t_3 = __pyx_v_v->endA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":578
 *                 v.breakB_precise = 1
 *                 v.breakA = v.endA
 *                 v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 v.join_type = "3to3"
 */
        __pyx_t_3 = __pyx_v_v->endB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":579
 *                 v.breakA = v.endA
 *                 v.breakB = v.endB
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "3to3"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":580
 *                 v.breakB = v.endB
 *                 v.svtype = "INV"
 *                 v.join_type = "3to3"             # <<<<<<<<<<<<<<
 * 
 *             else:  # Guess using pos only
 */
        __Pyx_INCREF(__pyx_kp_u_3to3);
        __Pyx_GIVEREF(__pyx_kp_u_3to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_3to3;

        /* "dysgu/sv_category.pyx":574
 * 
 *             # Break right
 *             elif v.right_clipA and v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 */
        goto __pyx_L62;
      }

      /* "dysgu/sv_category.pyx":583
 * 
 *             else:  # Guess using pos only
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"
 */
      /*else*/ {
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":584
 *             else:  # Guess using pos only
 *                 v.breakA = v.posA
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 if v.strandA == 5:
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":585
 *                 v.breakA = v.posA
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 if v.strandA == 5:
 *                     v.join_type = "5to5"
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":586
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"
 *                 if v.strandA == 5:             # <<<<<<<<<<<<<<
 *                     v.join_type = "5to5"
 *                 else:
 */
        __pyx_t_1 = (__pyx_v_v->strandA == 5);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":587
 *                 v.svtype = "INV"
 *                 if v.strandA == 5:
 *                     v.join_type = "5to5"             # <<<<<<<<<<<<<<
 *                 else:
 *                     v.join_type = "3to3"
 */
          __Pyx_INCREF(__pyx_kp_u_5to5);
          __Pyx_GIVEREF(__pyx_kp_u_5to5);
          __Pyx_GOTREF(__pyx_v_v->join_type);
          __Pyx_DECREF(__pyx_v_v->join_type);
          __pyx_v_v->join_type = __pyx_kp_u_5to5;

          /* "dysgu/sv_category.pyx":586
 *                 v.breakB = v.posB
 *                 v.svtype = "INV"
 *                 if v.strandA == 5:             # <<<<<<<<<<<<<<
 *                     v.join_type = "5to5"
 *                 else:
 */
          goto __pyx_L67;
        }

        /* "dysgu/sv_category.pyx":589
 *                     v.join_type = "5to5"
 *                 else:
 *                     v.join_type = "3to3"             # <<<<<<<<<<<<<<
 * 
 * 
 */
        /*else*/ {
          __Pyx_INCREF(__pyx_kp_u_3to3);
          __Pyx_GIVEREF(__pyx_kp_u_3to3);
          __Pyx_GOTREF(__pyx_v_v->join_type);
          __Pyx_DECREF(__pyx_v_v->join_type);
          __pyx_v_v->join_type = __pyx_kp_u_3to3;
        }
        __pyx_L67:;
      }
      __pyx_L62:;
    }
    __pyx_L50:;
  }
  __pyx_L3:;

  /* "dysgu/sv_category.pyx":289
 * 
 * 
 * cdef void same_read(AlignmentItem v):             # <<<<<<<<<<<<<<
 * 
 *     cdef int query_gap = 0
 */

  /* function exit code */
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_4);
  __Pyx_XDECREF(__pyx_t_5);
  __Pyx_AddTraceback("dysgu.sv_category.same_read", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_L0:;
  __Pyx_XDECREF(__pyx_v_align_overlap);
  __Pyx_RefNannyFinishContext();
}

/* "dysgu/sv_category.pyx":592
 * 
 * 
 * cdef void different_read(AlignmentItem v):             # <<<<<<<<<<<<<<
 * 
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA <= v.endB):  # A is first
 */

static void __pyx_f_5dysgu_11sv_category_different_read(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_v) {
  __Pyx_RefNannyDeclarations
  int __pyx_t_1;
  int __pyx_t_2;
  int __pyx_t_3;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("different_read", 1);

  /* "dysgu/sv_category.pyx":594
 * cdef void different_read(AlignmentItem v):
 * 
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA <= v.endB):  # A is first             # <<<<<<<<<<<<<<
 * 
 *         if v.strandA == 3 and v.strandB == 5:  # DEL type
 */
  __pyx_t_2 = (__pyx_v_v->posA < __pyx_v_v->posB);
  if (!__pyx_t_2) {
  } else {
    __pyx_t_1 = __pyx_t_2;
    goto __pyx_L4_bool_binop_done;
  }
  __pyx_t_2 = (__pyx_v_v->posA == __pyx_v_v->posB);
  if (__pyx_t_2) {
  } else {
    __pyx_t_1 = __pyx_t_2;
    goto __pyx_L4_bool_binop_done;
  }
  __pyx_t_2 = (__pyx_v_v->endA <= __pyx_v_v->endB);
  __pyx_t_1 = __pyx_t_2;
  __pyx_L4_bool_binop_done:;
  if (__pyx_t_1) {

    /* "dysgu/sv_category.pyx":596
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA <= v.endB):  # A is first
 * 
 *         if v.strandA == 3 and v.strandB == 5:  # DEL type             # <<<<<<<<<<<<<<
 *             v.breakA = v.endA
 *             if v.right_clipA:
 */
    __pyx_t_2 = (__pyx_v_v->strandA == 3);
    if (__pyx_t_2) {
    } else {
      __pyx_t_1 = __pyx_t_2;
      goto __pyx_L8_bool_binop_done;
    }
    __pyx_t_2 = (__pyx_v_v->strandB == 5);
    __pyx_t_1 = __pyx_t_2;
    __pyx_L8_bool_binop_done:;
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":597
 * 
 *         if v.strandA == 3 and v.strandB == 5:  # DEL type
 *             v.breakA = v.endA             # <<<<<<<<<<<<<<
 *             if v.right_clipA:
 *                 v.breakA_precise = 1
 */
      __pyx_t_3 = __pyx_v_v->endA;
      __pyx_v_v->breakA = __pyx_t_3;

      /* "dysgu/sv_category.pyx":598
 *         if v.strandA == 3 and v.strandB == 5:  # DEL type
 *             v.breakA = v.endA
 *             if v.right_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 * 
 */
      __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":599
 *             v.breakA = v.endA
 *             if v.right_clipA:
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *             v.breakB = v.posB
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":598
 *         if v.strandA == 3 and v.strandB == 5:  # DEL type
 *             v.breakA = v.endA
 *             if v.right_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 * 
 */
      }

      /* "dysgu/sv_category.pyx":601
 *                 v.breakA_precise = 1
 * 
 *             v.breakB = v.posB             # <<<<<<<<<<<<<<
 *             if v.left_clipB:
 *                 v.breakB_precise = 1
 */
      __pyx_t_3 = __pyx_v_v->posB;
      __pyx_v_v->breakB = __pyx_t_3;

      /* "dysgu/sv_category.pyx":602
 * 
 *             v.breakB = v.posB
 *             if v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
      __pyx_t_1 = (__pyx_v_v->left_clipB != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":603
 *             v.breakB = v.posB
 *             if v.left_clipB:
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *             v.svtype = "INS"
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":602
 * 
 *             v.breakB = v.posB
 *             if v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
      }

      /* "dysgu/sv_category.pyx":605
 *                 v.breakB_precise = 1
 * 
 *             v.svtype = "INS"             # <<<<<<<<<<<<<<
 *             v.join_type = "3to5"
 * 
 */
      __Pyx_INCREF(__pyx_n_u_INS);
      __Pyx_GIVEREF(__pyx_n_u_INS);
      __Pyx_GOTREF(__pyx_v_v->svtype);
      __Pyx_DECREF(__pyx_v_v->svtype);
      __pyx_v_v->svtype = __pyx_n_u_INS;

      /* "dysgu/sv_category.pyx":606
 * 
 *             v.svtype = "INS"
 *             v.join_type = "3to5"             # <<<<<<<<<<<<<<
 * 
 *         elif v.strandA == 5 and v.strandB == 3:  # DUP type
 */
      __Pyx_INCREF(__pyx_kp_u_3to5);
      __Pyx_GIVEREF(__pyx_kp_u_3to5);
      __Pyx_GOTREF(__pyx_v_v->join_type);
      __Pyx_DECREF(__pyx_v_v->join_type);
      __pyx_v_v->join_type = __pyx_kp_u_3to5;

      /* "dysgu/sv_category.pyx":596
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA <= v.endB):  # A is first
 * 
 *         if v.strandA == 3 and v.strandB == 5:  # DEL type             # <<<<<<<<<<<<<<
 *             v.breakA = v.endA
 *             if v.right_clipA:
 */
      goto __pyx_L7;
    }

    /* "dysgu/sv_category.pyx":608
 *             v.join_type = "3to5"
 * 
 *         elif v.strandA == 5 and v.strandB == 3:  # DUP type             # <<<<<<<<<<<<<<
 *             v.breakA = v.posA
 *             if v.left_clipA:
 */
    __pyx_t_2 = (__pyx_v_v->strandA == 5);
    if (__pyx_t_2) {
    } else {
      __pyx_t_1 = __pyx_t_2;
      goto __pyx_L12_bool_binop_done;
    }
    __pyx_t_2 = (__pyx_v_v->strandB == 3);
    __pyx_t_1 = __pyx_t_2;
    __pyx_L12_bool_binop_done:;
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":609
 * 
 *         elif v.strandA == 5 and v.strandB == 3:  # DUP type
 *             v.breakA = v.posA             # <<<<<<<<<<<<<<
 *             if v.left_clipA:
 *                 v.breakA_precise = 1
 */
      __pyx_t_3 = __pyx_v_v->posA;
      __pyx_v_v->breakA = __pyx_t_3;

      /* "dysgu/sv_category.pyx":610
 *         elif v.strandA == 5 and v.strandB == 3:  # DUP type
 *             v.breakA = v.posA
 *             if v.left_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 * 
 */
      __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":611
 *             v.breakA = v.posA
 *             if v.left_clipA:
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *             v.breakB = v.endB
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":610
 *         elif v.strandA == 5 and v.strandB == 3:  # DUP type
 *             v.breakA = v.posA
 *             if v.left_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 * 
 */
      }

      /* "dysgu/sv_category.pyx":613
 *                 v.breakA_precise = 1
 * 
 *             v.breakB = v.endB             # <<<<<<<<<<<<<<
 *             if v.right_clipB:
 *                 v.breakB_precise = 1
 */
      __pyx_t_3 = __pyx_v_v->endB;
      __pyx_v_v->breakB = __pyx_t_3;

      /* "dysgu/sv_category.pyx":614
 * 
 *             v.breakB = v.endB
 *             if v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
      __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":615
 *             v.breakB = v.endB
 *             if v.right_clipB:
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *             v.svtype = "DUP"
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":614
 * 
 *             v.breakB = v.endB
 *             if v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
      }

      /* "dysgu/sv_category.pyx":617
 *                 v.breakB_precise = 1
 * 
 *             v.svtype = "DUP"             # <<<<<<<<<<<<<<
 *             v.join_type = "5to3"
 * 
 */
      __Pyx_INCREF(__pyx_n_u_DUP);
      __Pyx_GIVEREF(__pyx_n_u_DUP);
      __Pyx_GOTREF(__pyx_v_v->svtype);
      __Pyx_DECREF(__pyx_v_v->svtype);
      __pyx_v_v->svtype = __pyx_n_u_DUP;

      /* "dysgu/sv_category.pyx":618
 * 
 *             v.svtype = "DUP"
 *             v.join_type = "5to3"             # <<<<<<<<<<<<<<
 * 
 *         elif v.strandA == v.strandB:
 */
      __Pyx_INCREF(__pyx_kp_u_5to3);
      __Pyx_GIVEREF(__pyx_kp_u_5to3);
      __Pyx_GOTREF(__pyx_v_v->join_type);
      __Pyx_DECREF(__pyx_v_v->join_type);
      __pyx_v_v->join_type = __pyx_kp_u_5to3;

      /* "dysgu/sv_category.pyx":608
 *             v.join_type = "3to5"
 * 
 *         elif v.strandA == 5 and v.strandB == 3:  # DUP type             # <<<<<<<<<<<<<<
 *             v.breakA = v.posA
 *             if v.left_clipA:
 */
      goto __pyx_L7;
    }

    /* "dysgu/sv_category.pyx":620
 *             v.join_type = "5to3"
 * 
 *         elif v.strandA == v.strandB:             # <<<<<<<<<<<<<<
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested
 * 
 */
    __pyx_t_1 = (__pyx_v_v->strandA == __pyx_v_v->strandB);
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":621
 * 
 *         elif v.strandA == v.strandB:
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested             # <<<<<<<<<<<<<<
 * 
 *                 if v.strandA == 3:  # Both forward strand
 */
      __pyx_t_3 = __pyx_f_5dysgu_13map_set_utils_is_overlapping(__pyx_v_v->posA, __pyx_v_v->endA, __pyx_v_v->posB, __pyx_v_v->endB, 0); if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 621, __pyx_L1_error)
      __pyx_t_1 = (__pyx_t_3 != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":623
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested
 * 
 *                 if v.strandA == 3:  # Both forward strand             # <<<<<<<<<<<<<<
 *                     v.breakA = v.endA
 *                     if v.right_clipA:
 */
        __pyx_t_1 = (__pyx_v_v->strandA == 3);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":624
 * 
 *                 if v.strandA == 3:  # Both forward strand
 *                     v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                     if v.right_clipA:
 *                         v.breakA_precise = 1
 */
          __pyx_t_3 = __pyx_v_v->endA;
          __pyx_v_v->breakA = __pyx_t_3;

          /* "dysgu/sv_category.pyx":625
 *                 if v.strandA == 3:  # Both forward strand
 *                     v.breakA = v.endA
 *                     if v.right_clipA:             # <<<<<<<<<<<<<<
 *                         v.breakA_precise = 1
 * 
 */
          __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
          if (__pyx_t_1) {

            /* "dysgu/sv_category.pyx":626
 *                     v.breakA = v.endA
 *                     if v.right_clipA:
 *                         v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                     v.breakB = v.endB
 */
            __pyx_v_v->breakA_precise = 1;

            /* "dysgu/sv_category.pyx":625
 *                 if v.strandA == 3:  # Both forward strand
 *                     v.breakA = v.endA
 *                     if v.right_clipA:             # <<<<<<<<<<<<<<
 *                         v.breakA_precise = 1
 * 
 */
          }

          /* "dysgu/sv_category.pyx":628
 *                         v.breakA_precise = 1
 * 
 *                     v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                     if v.right_clipB:
 *                         v.breakB_precise = 1
 */
          __pyx_t_3 = __pyx_v_v->endB;
          __pyx_v_v->breakB = __pyx_t_3;

          /* "dysgu/sv_category.pyx":629
 * 
 *                     v.breakB = v.endB
 *                     if v.right_clipB:             # <<<<<<<<<<<<<<
 *                         v.breakB_precise = 1
 *                     v.svtype = "INV"
 */
          __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
          if (__pyx_t_1) {

            /* "dysgu/sv_category.pyx":630
 *                     v.breakB = v.endB
 *                     if v.right_clipB:
 *                         v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                     v.svtype = "INV"
 *                     v.join_type = "3to3"
 */
            __pyx_v_v->breakB_precise = 1;

            /* "dysgu/sv_category.pyx":629
 * 
 *                     v.breakB = v.endB
 *                     if v.right_clipB:             # <<<<<<<<<<<<<<
 *                         v.breakB_precise = 1
 *                     v.svtype = "INV"
 */
          }

          /* "dysgu/sv_category.pyx":631
 *                     if v.right_clipB:
 *                         v.breakB_precise = 1
 *                     v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                     v.join_type = "3to3"
 * 
 */
          __Pyx_INCREF(__pyx_n_u_INV);
          __Pyx_GIVEREF(__pyx_n_u_INV);
          __Pyx_GOTREF(__pyx_v_v->svtype);
          __Pyx_DECREF(__pyx_v_v->svtype);
          __pyx_v_v->svtype = __pyx_n_u_INV;

          /* "dysgu/sv_category.pyx":632
 *                         v.breakB_precise = 1
 *                     v.svtype = "INV"
 *                     v.join_type = "3to3"             # <<<<<<<<<<<<<<
 * 
 *                 else:  # Both forward strand
 */
          __Pyx_INCREF(__pyx_kp_u_3to3);
          __Pyx_GIVEREF(__pyx_kp_u_3to3);
          __Pyx_GOTREF(__pyx_v_v->join_type);
          __Pyx_DECREF(__pyx_v_v->join_type);
          __pyx_v_v->join_type = __pyx_kp_u_3to3;

          /* "dysgu/sv_category.pyx":623
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested
 * 
 *                 if v.strandA == 3:  # Both forward strand             # <<<<<<<<<<<<<<
 *                     v.breakA = v.endA
 *                     if v.right_clipA:
 */
          goto __pyx_L17;
        }

        /* "dysgu/sv_category.pyx":635
 * 
 *                 else:  # Both forward strand
 *                     v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                     if v.left_clipA:
 *                         v.breakA_precise = 1
 */
        /*else*/ {
          __pyx_t_3 = __pyx_v_v->posA;
          __pyx_v_v->breakA = __pyx_t_3;

          /* "dysgu/sv_category.pyx":636
 *                 else:  # Both forward strand
 *                     v.breakA = v.posA
 *                     if v.left_clipA:             # <<<<<<<<<<<<<<
 *                         v.breakA_precise = 1
 * 
 */
          __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
          if (__pyx_t_1) {

            /* "dysgu/sv_category.pyx":637
 *                     v.breakA = v.posA
 *                     if v.left_clipA:
 *                         v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                     v.breakB = v.posB
 */
            __pyx_v_v->breakA_precise = 1;

            /* "dysgu/sv_category.pyx":636
 *                 else:  # Both forward strand
 *                     v.breakA = v.posA
 *                     if v.left_clipA:             # <<<<<<<<<<<<<<
 *                         v.breakA_precise = 1
 * 
 */
          }

          /* "dysgu/sv_category.pyx":639
 *                         v.breakA_precise = 1
 * 
 *                     v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                     if v.left_clipB:
 *                         v.breakB_precise = 1
 */
          __pyx_t_3 = __pyx_v_v->posB;
          __pyx_v_v->breakB = __pyx_t_3;

          /* "dysgu/sv_category.pyx":640
 * 
 *                     v.breakB = v.posB
 *                     if v.left_clipB:             # <<<<<<<<<<<<<<
 *                         v.breakB_precise = 1
 *                     v.svtype = "INV"
 */
          __pyx_t_1 = (__pyx_v_v->left_clipB != 0);
          if (__pyx_t_1) {

            /* "dysgu/sv_category.pyx":641
 *                     v.breakB = v.posB
 *                     if v.left_clipB:
 *                         v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                     v.svtype = "INV"
 *                     v.join_type = "5to5"
 */
            __pyx_v_v->breakB_precise = 1;

            /* "dysgu/sv_category.pyx":640
 * 
 *                     v.breakB = v.posB
 *                     if v.left_clipB:             # <<<<<<<<<<<<<<
 *                         v.breakB_precise = 1
 *                     v.svtype = "INV"
 */
          }

          /* "dysgu/sv_category.pyx":642
 *                     if v.left_clipB:
 *                         v.breakB_precise = 1
 *                     v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                     v.join_type = "5to5"
 * 
 */
          __Pyx_INCREF(__pyx_n_u_INV);
          __Pyx_GIVEREF(__pyx_n_u_INV);
          __Pyx_GOTREF(__pyx_v_v->svtype);
          __Pyx_DECREF(__pyx_v_v->svtype);
          __pyx_v_v->svtype = __pyx_n_u_INV;

          /* "dysgu/sv_category.pyx":643
 *                         v.breakB_precise = 1
 *                     v.svtype = "INV"
 *                     v.join_type = "5to5"             # <<<<<<<<<<<<<<
 * 
 *             elif not v.right_clipA and not v.right_clipB:
 */
          __Pyx_INCREF(__pyx_kp_u_5to5);
          __Pyx_GIVEREF(__pyx_kp_u_5to5);
          __Pyx_GOTREF(__pyx_v_v->join_type);
          __Pyx_DECREF(__pyx_v_v->join_type);
          __pyx_v_v->join_type = __pyx_kp_u_5to5;
        }
        __pyx_L17:;

        /* "dysgu/sv_category.pyx":621
 * 
 *         elif v.strandA == v.strandB:
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested             # <<<<<<<<<<<<<<
 * 
 *                 if v.strandA == 3:  # Both forward strand
 */
        goto __pyx_L16;
      }

      /* "dysgu/sv_category.pyx":645
 *                     v.join_type = "5to5"
 * 
 *             elif not v.right_clipA and not v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.posA
 *                 if v.left_clipA:
 */
      __pyx_t_2 = (!(__pyx_v_v->right_clipA != 0));
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L22_bool_binop_done;
      }
      __pyx_t_2 = (!(__pyx_v_v->right_clipB != 0));
      __pyx_t_1 = __pyx_t_2;
      __pyx_L22_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":646
 * 
 *             elif not v.right_clipA and not v.right_clipB:
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":647
 *             elif not v.right_clipA and not v.right_clipB:
 *                 v.breakA = v.posA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB
 */
        __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":648
 *                 v.breakA = v.posA
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB = v.posB
 *                 if v.left_clipB:
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":647
 *             elif not v.right_clipA and not v.right_clipB:
 *                 v.breakA = v.posA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB
 */
        }

        /* "dysgu/sv_category.pyx":649
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 if v.left_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":650
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 */
        __pyx_t_1 = (__pyx_v_v->left_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":651
 *                 v.breakB = v.posB
 *                 if v.left_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 v.join_type = "5to5"
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":650
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 */
        }

        /* "dysgu/sv_category.pyx":652
 *                 if v.left_clipB:
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to5"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":653
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 *                 v.join_type = "5to5"             # <<<<<<<<<<<<<<
 * 
 *             elif not v.left_clipA and not v.left_clipB:
 */
        __Pyx_INCREF(__pyx_kp_u_5to5);
        __Pyx_GIVEREF(__pyx_kp_u_5to5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to5;

        /* "dysgu/sv_category.pyx":645
 *                     v.join_type = "5to5"
 * 
 *             elif not v.right_clipA and not v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.posA
 *                 if v.left_clipA:
 */
        goto __pyx_L16;
      }

      /* "dysgu/sv_category.pyx":655
 *                 v.join_type = "5to5"
 * 
 *             elif not v.left_clipA and not v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 */
      __pyx_t_2 = (!(__pyx_v_v->left_clipA != 0));
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L26_bool_binop_done;
      }
      __pyx_t_2 = (!(__pyx_v_v->left_clipB != 0));
      __pyx_t_1 = __pyx_t_2;
      __pyx_L26_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":656
 * 
 *             elif not v.left_clipA and not v.left_clipB:
 *                 v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":657
 *             elif not v.left_clipA and not v.left_clipB:
 *                 v.breakA = v.endA
 *                 if v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 */
        __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":658
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB = v.endB
 *                 if v.right_clipB:
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":657
 *             elif not v.left_clipA and not v.left_clipB:
 *                 v.breakA = v.endA
 *                 if v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 */
        }

        /* "dysgu/sv_category.pyx":659
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":660
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 */
        __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":661
 *                 v.breakB = v.endB
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 v.join_type = "3to3"
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":660
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 */
        }

        /* "dysgu/sv_category.pyx":662
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "3to3"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":663
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 *                 v.join_type = "3to3"             # <<<<<<<<<<<<<<
 * 
 *             elif v.right_clipA and v.left_clipB:
 */
        __Pyx_INCREF(__pyx_kp_u_3to3);
        __Pyx_GIVEREF(__pyx_kp_u_3to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_3to3;

        /* "dysgu/sv_category.pyx":655
 *                 v.join_type = "5to5"
 * 
 *             elif not v.left_clipA and not v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 */
        goto __pyx_L16;
      }

      /* "dysgu/sv_category.pyx":665
 *                 v.join_type = "3to3"
 * 
 *             elif v.right_clipA and v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 v.breakA_precise = 1
 */
      __pyx_t_2 = (__pyx_v_v->right_clipA != 0);
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L30_bool_binop_done;
      }
      __pyx_t_2 = (__pyx_v_v->left_clipB != 0);
      __pyx_t_1 = __pyx_t_2;
      __pyx_L30_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":666
 * 
 *             elif v.right_clipA and v.left_clipB:
 *                 v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 *                 v.breakB = v.posB
 */
        __pyx_t_3 = __pyx_v_v->endA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":667
 *             elif v.right_clipA and v.left_clipB:
 *                 v.breakA = v.endA
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB = v.posB
 *                 v.breakB_precise = 1
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":668
 *                 v.breakA = v.endA
 *                 v.breakA_precise = 1
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 *                 # v.svtype = "INV:DUP"
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":669
 *                 v.breakA_precise = 1
 *                 v.breakB = v.posB
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 # v.svtype = "INV:DUP"
 *                 v.svtype = "INV"
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":671
 *                 v.breakB_precise = 1
 *                 # v.svtype = "INV:DUP"
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to3"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":672
 *                 # v.svtype = "INV:DUP"
 *                 v.svtype = "INV"
 *                 v.join_type = "5to3"             # <<<<<<<<<<<<<<
 * 
 *             else:
 */
        __Pyx_INCREF(__pyx_kp_u_5to3);
        __Pyx_GIVEREF(__pyx_kp_u_5to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to3;

        /* "dysgu/sv_category.pyx":665
 *                 v.join_type = "3to3"
 * 
 *             elif v.right_clipA and v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 v.breakA_precise = 1
 */
        goto __pyx_L16;
      }

      /* "dysgu/sv_category.pyx":675
 * 
 *             else:
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 *                 v.breakB = v.endB
 */
      /*else*/ {
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":676
 *             else:
 *                 v.breakA = v.posA
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB = v.endB
 *                 v.breakB_precise = 1
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":677
 *                 v.breakA = v.posA
 *                 v.breakA_precise = 1
 *                 v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 *                 v.svtype = "INV"
 */
        __pyx_t_3 = __pyx_v_v->endB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":678
 *                 v.breakA_precise = 1
 *                 v.breakB = v.endB
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 # v.svtype = "INV:DUP"
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":679
 *                 v.breakB = v.endB
 *                 v.breakB_precise = 1
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 # v.svtype = "INV:DUP"
 *                 v.join_type = "3to5"
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":681
 *                 v.svtype = "INV"
 *                 # v.svtype = "INV:DUP"
 *                 v.join_type = "3to5"             # <<<<<<<<<<<<<<
 * 
 *     else:  # B is first; B <= A
 */
        __Pyx_INCREF(__pyx_kp_u_3to5);
        __Pyx_GIVEREF(__pyx_kp_u_3to5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_3to5;
      }
      __pyx_L16:;

      /* "dysgu/sv_category.pyx":620
 *             v.join_type = "5to3"
 * 
 *         elif v.strandA == v.strandB:             # <<<<<<<<<<<<<<
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested
 * 
 */
    }
    __pyx_L7:;

    /* "dysgu/sv_category.pyx":594
 * cdef void different_read(AlignmentItem v):
 * 
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA <= v.endB):  # A is first             # <<<<<<<<<<<<<<
 * 
 *         if v.strandA == 3 and v.strandB == 5:  # DEL type
 */
    goto __pyx_L3;
  }

  /* "dysgu/sv_category.pyx":685
 *     else:  # B is first; B <= A
 * 
 *         if v.strandA == 5 and v.strandB == 3:  # DEL type             # <<<<<<<<<<<<<<
 *             v.breakA = v.posA
 *             if v.left_clipA:
 */
  /*else*/ {
    __pyx_t_2 = (__pyx_v_v->strandA == 5);
    if (__pyx_t_2) {
    } else {
      __pyx_t_1 = __pyx_t_2;
      goto __pyx_L33_bool_binop_done;
    }
    __pyx_t_2 = (__pyx_v_v->strandB == 3);
    __pyx_t_1 = __pyx_t_2;
    __pyx_L33_bool_binop_done:;
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":686
 * 
 *         if v.strandA == 5 and v.strandB == 3:  # DEL type
 *             v.breakA = v.posA             # <<<<<<<<<<<<<<
 *             if v.left_clipA:
 *                 v.breakA_precise = 1
 */
      __pyx_t_3 = __pyx_v_v->posA;
      __pyx_v_v->breakA = __pyx_t_3;

      /* "dysgu/sv_category.pyx":687
 *         if v.strandA == 5 and v.strandB == 3:  # DEL type
 *             v.breakA = v.posA
 *             if v.left_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 * 
 */
      __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":688
 *             v.breakA = v.posA
 *             if v.left_clipA:
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *             v.breakB = v.endB
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":687
 *         if v.strandA == 5 and v.strandB == 3:  # DEL type
 *             v.breakA = v.posA
 *             if v.left_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 * 
 */
      }

      /* "dysgu/sv_category.pyx":690
 *                 v.breakA_precise = 1
 * 
 *             v.breakB = v.endB             # <<<<<<<<<<<<<<
 *             if v.right_clipB:
 *                 v.breakB_precise = 1
 */
      __pyx_t_3 = __pyx_v_v->endB;
      __pyx_v_v->breakB = __pyx_t_3;

      /* "dysgu/sv_category.pyx":691
 * 
 *             v.breakB = v.endB
 *             if v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
      __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":692
 *             v.breakB = v.endB
 *             if v.right_clipB:
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *             v.svtype = "INS"
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":691
 * 
 *             v.breakB = v.endB
 *             if v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
      }

      /* "dysgu/sv_category.pyx":694
 *                 v.breakB_precise = 1
 * 
 *             v.svtype = "INS"             # <<<<<<<<<<<<<<
 *             v.join_type = "3to5"
 * 
 */
      __Pyx_INCREF(__pyx_n_u_INS);
      __Pyx_GIVEREF(__pyx_n_u_INS);
      __Pyx_GOTREF(__pyx_v_v->svtype);
      __Pyx_DECREF(__pyx_v_v->svtype);
      __pyx_v_v->svtype = __pyx_n_u_INS;

      /* "dysgu/sv_category.pyx":695
 * 
 *             v.svtype = "INS"
 *             v.join_type = "3to5"             # <<<<<<<<<<<<<<
 * 
 *         elif v.strandA == 3 and v.strandB == 5:  # DUP type
 */
      __Pyx_INCREF(__pyx_kp_u_3to5);
      __Pyx_GIVEREF(__pyx_kp_u_3to5);
      __Pyx_GOTREF(__pyx_v_v->join_type);
      __Pyx_DECREF(__pyx_v_v->join_type);
      __pyx_v_v->join_type = __pyx_kp_u_3to5;

      /* "dysgu/sv_category.pyx":685
 *     else:  # B is first; B <= A
 * 
 *         if v.strandA == 5 and v.strandB == 3:  # DEL type             # <<<<<<<<<<<<<<
 *             v.breakA = v.posA
 *             if v.left_clipA:
 */
      goto __pyx_L32;
    }

    /* "dysgu/sv_category.pyx":697
 *             v.join_type = "3to5"
 * 
 *         elif v.strandA == 3 and v.strandB == 5:  # DUP type             # <<<<<<<<<<<<<<
 *             v.breakA = v.endA
 *             if v.right_clipA:
 */
    __pyx_t_2 = (__pyx_v_v->strandA == 3);
    if (__pyx_t_2) {
    } else {
      __pyx_t_1 = __pyx_t_2;
      goto __pyx_L37_bool_binop_done;
    }
    __pyx_t_2 = (__pyx_v_v->strandB == 5);
    __pyx_t_1 = __pyx_t_2;
    __pyx_L37_bool_binop_done:;
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":698
 * 
 *         elif v.strandA == 3 and v.strandB == 5:  # DUP type
 *             v.breakA = v.endA             # <<<<<<<<<<<<<<
 *             if v.right_clipA:
 *                 v.breakA_precise = 1
 */
      __pyx_t_3 = __pyx_v_v->endA;
      __pyx_v_v->breakA = __pyx_t_3;

      /* "dysgu/sv_category.pyx":699
 *         elif v.strandA == 3 and v.strandB == 5:  # DUP type
 *             v.breakA = v.endA
 *             if v.right_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 * 
 */
      __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":700
 *             v.breakA = v.endA
 *             if v.right_clipA:
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *             v.breakB = v.posB
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":699
 *         elif v.strandA == 3 and v.strandB == 5:  # DUP type
 *             v.breakA = v.endA
 *             if v.right_clipA:             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 * 
 */
      }

      /* "dysgu/sv_category.pyx":702
 *                 v.breakA_precise = 1
 * 
 *             v.breakB = v.posB             # <<<<<<<<<<<<<<
 *             if v.left_clipB:
 *                 v.breakB_precise = 1
 */
      __pyx_t_3 = __pyx_v_v->posB;
      __pyx_v_v->breakB = __pyx_t_3;

      /* "dysgu/sv_category.pyx":703
 * 
 *             v.breakB = v.posB
 *             if v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
      __pyx_t_1 = (__pyx_v_v->left_clipB != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":704
 *             v.breakB = v.posB
 *             if v.left_clipB:
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *             v.svtype = "DUP"
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":703
 * 
 *             v.breakB = v.posB
 *             if v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 * 
 */
      }

      /* "dysgu/sv_category.pyx":706
 *                 v.breakB_precise = 1
 * 
 *             v.svtype = "DUP"             # <<<<<<<<<<<<<<
 *             v.join_type = "5to3"
 * 
 */
      __Pyx_INCREF(__pyx_n_u_DUP);
      __Pyx_GIVEREF(__pyx_n_u_DUP);
      __Pyx_GOTREF(__pyx_v_v->svtype);
      __Pyx_DECREF(__pyx_v_v->svtype);
      __pyx_v_v->svtype = __pyx_n_u_DUP;

      /* "dysgu/sv_category.pyx":707
 * 
 *             v.svtype = "DUP"
 *             v.join_type = "5to3"             # <<<<<<<<<<<<<<
 * 
 *         elif v.strandA == v.strandB:  # INV type
 */
      __Pyx_INCREF(__pyx_kp_u_5to3);
      __Pyx_GIVEREF(__pyx_kp_u_5to3);
      __Pyx_GOTREF(__pyx_v_v->join_type);
      __Pyx_DECREF(__pyx_v_v->join_type);
      __pyx_v_v->join_type = __pyx_kp_u_5to3;

      /* "dysgu/sv_category.pyx":697
 *             v.join_type = "3to5"
 * 
 *         elif v.strandA == 3 and v.strandB == 5:  # DUP type             # <<<<<<<<<<<<<<
 *             v.breakA = v.endA
 *             if v.right_clipA:
 */
      goto __pyx_L32;
    }

    /* "dysgu/sv_category.pyx":709
 *             v.join_type = "5to3"
 * 
 *         elif v.strandA == v.strandB:  # INV type             # <<<<<<<<<<<<<<
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP
 */
    __pyx_t_1 = (__pyx_v_v->strandA == __pyx_v_v->strandB);
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":711
 *         elif v.strandA == v.strandB:  # INV type
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP             # <<<<<<<<<<<<<<
 *                 if v.left_clipA:
 *                     v.breakA = v.posA
 */
      __pyx_t_3 = __pyx_f_5dysgu_13map_set_utils_is_overlapping(__pyx_v_v->posA, __pyx_v_v->endA, __pyx_v_v->posB, __pyx_v_v->endB, 0); if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 711, __pyx_L1_error)
      __pyx_t_1 = (__pyx_t_3 != 0);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":712
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA = v.posA
 *                     v.breakA_precise = 1
 */
        __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":713
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP
 *                 if v.left_clipA:
 *                     v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 elif v.right_clipA:
 */
          __pyx_t_3 = __pyx_v_v->posA;
          __pyx_v_v->breakA = __pyx_t_3;

          /* "dysgu/sv_category.pyx":714
 *                 if v.left_clipA:
 *                     v.breakA = v.posA
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 elif v.right_clipA:
 *                     v.breakA = v.endA
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":712
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA = v.posA
 *                     v.breakA_precise = 1
 */
          goto __pyx_L42;
        }

        /* "dysgu/sv_category.pyx":715
 *                     v.breakA = v.posA
 *                     v.breakA_precise = 1
 *                 elif v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA = v.endA
 *                     v.breakA_precise = 1
 */
        __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":716
 *                     v.breakA_precise = 1
 *                 elif v.right_clipA:
 *                     v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 else:
 */
          __pyx_t_3 = __pyx_v_v->endA;
          __pyx_v_v->breakA = __pyx_t_3;

          /* "dysgu/sv_category.pyx":717
 *                 elif v.right_clipA:
 *                     v.breakA = v.endA
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 else:
 *                     v.breakA = v.endA
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":715
 *                     v.breakA = v.posA
 *                     v.breakA_precise = 1
 *                 elif v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA = v.endA
 *                     v.breakA_precise = 1
 */
          goto __pyx_L42;
        }

        /* "dysgu/sv_category.pyx":719
 *                     v.breakA_precise = 1
 *                 else:
 *                     v.breakA = v.endA             # <<<<<<<<<<<<<<
 * 
 *                 if v.left_clipB:
 */
        /*else*/ {
          __pyx_t_3 = __pyx_v_v->endA;
          __pyx_v_v->breakA = __pyx_t_3;
        }
        __pyx_L42:;

        /* "dysgu/sv_category.pyx":721
 *                     v.breakA = v.endA
 * 
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB = v.posB
 *                     v.breakB_precise = 1
 */
        __pyx_t_1 = (__pyx_v_v->left_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":722
 * 
 *                 if v.left_clipB:
 *                     v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 elif v.right_clipB:
 */
          __pyx_t_3 = __pyx_v_v->posB;
          __pyx_v_v->breakB = __pyx_t_3;

          /* "dysgu/sv_category.pyx":723
 *                 if v.left_clipB:
 *                     v.breakB = v.posB
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 elif v.right_clipB:
 *                     v.breakB = v.endB
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":721
 *                     v.breakA = v.endA
 * 
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB = v.posB
 *                     v.breakB_precise = 1
 */
          goto __pyx_L43;
        }

        /* "dysgu/sv_category.pyx":724
 *                     v.breakB = v.posB
 *                     v.breakB_precise = 1
 *                 elif v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB = v.endB
 *                     v.breakB_precise = 1
 */
        __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":725
 *                     v.breakB_precise = 1
 *                 elif v.right_clipB:
 *                     v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 else:
 */
          __pyx_t_3 = __pyx_v_v->endB;
          __pyx_v_v->breakB = __pyx_t_3;

          /* "dysgu/sv_category.pyx":726
 *                 elif v.right_clipB:
 *                     v.breakB = v.endB
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 else:
 *                     v.breakB = v.endB
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":724
 *                     v.breakB = v.posB
 *                     v.breakB_precise = 1
 *                 elif v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB = v.endB
 *                     v.breakB_precise = 1
 */
          goto __pyx_L43;
        }

        /* "dysgu/sv_category.pyx":728
 *                     v.breakB_precise = 1
 *                 else:
 *                     v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                 v.svtype = "DUP"
 *                 v.join_type = "5to3"
 */
        /*else*/ {
          __pyx_t_3 = __pyx_v_v->endB;
          __pyx_v_v->breakB = __pyx_t_3;
        }
        __pyx_L43:;

        /* "dysgu/sv_category.pyx":729
 *                 else:
 *                     v.breakB = v.endB
 *                 v.svtype = "DUP"             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to3"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_DUP);
        __Pyx_GIVEREF(__pyx_n_u_DUP);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_DUP;

        /* "dysgu/sv_category.pyx":730
 *                     v.breakB = v.endB
 *                 v.svtype = "DUP"
 *                 v.join_type = "5to3"             # <<<<<<<<<<<<<<
 * 
 *             elif v.right_clipA and v.left_clipB:
 */
        __Pyx_INCREF(__pyx_kp_u_5to3);
        __Pyx_GIVEREF(__pyx_kp_u_5to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to3;

        /* "dysgu/sv_category.pyx":711
 *         elif v.strandA == v.strandB:  # INV type
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP             # <<<<<<<<<<<<<<
 *                 if v.left_clipA:
 *                     v.breakA = v.posA
 */
        goto __pyx_L41;
      }

      /* "dysgu/sv_category.pyx":732
 *                 v.join_type = "5to3"
 * 
 *             elif v.right_clipA and v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 v.breakB = v.posB
 */
      __pyx_t_2 = (__pyx_v_v->right_clipA != 0);
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L44_bool_binop_done;
      }
      __pyx_t_2 = (__pyx_v_v->left_clipB != 0);
      __pyx_t_1 = __pyx_t_2;
      __pyx_L44_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":733
 * 
 *             elif v.right_clipA and v.left_clipB:
 *                 v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                 v.breakB = v.posB
 *                 v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":734
 *             elif v.right_clipA and v.left_clipB:
 *                 v.breakA = v.endA
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":735
 *                 v.breakA = v.endA
 *                 v.breakB = v.posB
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 *                 v.svtype = "DEL"
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":736
 *                 v.breakB = v.posB
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 v.svtype = "DEL"
 *                 v.join_type = "3to5"
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":737
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 *                 v.svtype = "DEL"             # <<<<<<<<<<<<<<
 *                 v.join_type = "3to5"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_DEL);
        __Pyx_GIVEREF(__pyx_n_u_DEL);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_DEL;

        /* "dysgu/sv_category.pyx":738
 *                 v.breakB_precise = 1
 *                 v.svtype = "DEL"
 *                 v.join_type = "3to5"             # <<<<<<<<<<<<<<
 * 
 *             elif v.left_clipA and v.right_clipB:
 */
        __Pyx_INCREF(__pyx_kp_u_3to5);
        __Pyx_GIVEREF(__pyx_kp_u_3to5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_3to5;

        /* "dysgu/sv_category.pyx":732
 *                 v.join_type = "5to3"
 * 
 *             elif v.right_clipA and v.left_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 v.breakB = v.posB
 */
        goto __pyx_L41;
      }

      /* "dysgu/sv_category.pyx":740
 *                 v.join_type = "3to5"
 * 
 *             elif v.left_clipA and v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.posA
 *                 v.breakB = v.endB
 */
      __pyx_t_2 = (__pyx_v_v->left_clipA != 0);
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L46_bool_binop_done;
      }
      __pyx_t_2 = (__pyx_v_v->right_clipB != 0);
      __pyx_t_1 = __pyx_t_2;
      __pyx_L46_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":741
 * 
 *             elif v.left_clipA and v.right_clipB:
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 v.breakB = v.endB
 *                 v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":742
 *             elif v.left_clipA and v.right_clipB:
 *                 v.breakA = v.posA
 *                 v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":743
 *                 v.breakA = v.posA
 *                 v.breakB = v.endB
 *                 v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB_precise = 1
 *                 v.svtype = "DUP"
 */
        __pyx_v_v->breakA_precise = 1;

        /* "dysgu/sv_category.pyx":744
 *                 v.breakB = v.endB
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 v.svtype = "DUP"
 *                 v.join_type = "5to3"
 */
        __pyx_v_v->breakB_precise = 1;

        /* "dysgu/sv_category.pyx":745
 *                 v.breakA_precise = 1
 *                 v.breakB_precise = 1
 *                 v.svtype = "DUP"             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to3"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_DUP);
        __Pyx_GIVEREF(__pyx_n_u_DUP);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_DUP;

        /* "dysgu/sv_category.pyx":746
 *                 v.breakB_precise = 1
 *                 v.svtype = "DUP"
 *                 v.join_type = "5to3"             # <<<<<<<<<<<<<<
 * 
 *             elif not v.left_clipB and not v.left_clipA:
 */
        __Pyx_INCREF(__pyx_kp_u_5to3);
        __Pyx_GIVEREF(__pyx_kp_u_5to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to3;

        /* "dysgu/sv_category.pyx":740
 *                 v.join_type = "3to5"
 * 
 *             elif v.left_clipA and v.right_clipB:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.posA
 *                 v.breakB = v.endB
 */
        goto __pyx_L41;
      }

      /* "dysgu/sv_category.pyx":748
 *                 v.join_type = "5to3"
 * 
 *             elif not v.left_clipB and not v.left_clipA:             # <<<<<<<<<<<<<<
 * 
 *                 v.breakB = v.endB
 */
      __pyx_t_2 = (!(__pyx_v_v->left_clipB != 0));
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L48_bool_binop_done;
      }
      __pyx_t_2 = (!(__pyx_v_v->left_clipA != 0));
      __pyx_t_1 = __pyx_t_2;
      __pyx_L48_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":750
 *             elif not v.left_clipB and not v.left_clipA:
 * 
 *                 v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":751
 * 
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":752
 *                 v.breakB = v.endB
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                 v.breakA = v.endA
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":751
 * 
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        }

        /* "dysgu/sv_category.pyx":754
 *                     v.breakB_precise = 1
 * 
 *                 v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":755
 * 
 *                 v.breakA = v.endA
 *                 if v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.svtype = "INV"
 */
        __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":756
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 v.join_type = "3to3"
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":755
 * 
 *                 v.breakA = v.endA
 *                 if v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.svtype = "INV"
 */
        }

        /* "dysgu/sv_category.pyx":757
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "3to3"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":758
 *                     v.breakA_precise = 1
 *                 v.svtype = "INV"
 *                 v.join_type = "3to3"             # <<<<<<<<<<<<<<
 * 
 *             elif not v.right_clipB and not v.right_clipA:
 */
        __Pyx_INCREF(__pyx_kp_u_3to3);
        __Pyx_GIVEREF(__pyx_kp_u_3to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_3to3;

        /* "dysgu/sv_category.pyx":748
 *                 v.join_type = "5to3"
 * 
 *             elif not v.left_clipB and not v.left_clipA:             # <<<<<<<<<<<<<<
 * 
 *                 v.breakB = v.endB
 */
        goto __pyx_L41;
      }

      /* "dysgu/sv_category.pyx":760
 *                 v.join_type = "3to3"
 * 
 *             elif not v.right_clipB and not v.right_clipA:             # <<<<<<<<<<<<<<
 * 
 *                 v.breakB = v.posB
 */
      __pyx_t_2 = (!(__pyx_v_v->right_clipB != 0));
      if (__pyx_t_2) {
      } else {
        __pyx_t_1 = __pyx_t_2;
        goto __pyx_L52_bool_binop_done;
      }
      __pyx_t_2 = (!(__pyx_v_v->right_clipA != 0));
      __pyx_t_1 = __pyx_t_2;
      __pyx_L52_bool_binop_done:;
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":762
 *             elif not v.right_clipB and not v.right_clipA:
 * 
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 if v.left_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":763
 * 
 *                 v.breakB = v.posB
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        __pyx_t_1 = (__pyx_v_v->left_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":764
 *                 v.breakB = v.posB
 *                 if v.left_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 * 
 *                 v.breakA = v.posA
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":763
 * 
 *                 v.breakB = v.posB
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 * 
 */
        }

        /* "dysgu/sv_category.pyx":766
 *                     v.breakB_precise = 1
 * 
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":767
 * 
 *                 v.breakA = v.posA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.svtype = "INV"
 */
        __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":768
 *                 v.breakA = v.posA
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 v.join_type = "5to5"
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":767
 * 
 *                 v.breakA = v.posA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.svtype = "INV"
 */
        }

        /* "dysgu/sv_category.pyx":769
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to5"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":770
 *                     v.breakA_precise = 1
 *                 v.svtype = "INV"
 *                 v.join_type = "5to5"             # <<<<<<<<<<<<<<
 * 
 *             elif v.strandA == 3:
 */
        __Pyx_INCREF(__pyx_kp_u_5to5);
        __Pyx_GIVEREF(__pyx_kp_u_5to5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to5;

        /* "dysgu/sv_category.pyx":760
 *                 v.join_type = "3to3"
 * 
 *             elif not v.right_clipB and not v.right_clipA:             # <<<<<<<<<<<<<<
 * 
 *                 v.breakB = v.posB
 */
        goto __pyx_L41;
      }

      /* "dysgu/sv_category.pyx":772
 *                 v.join_type = "5to5"
 * 
 *             elif v.strandA == 3:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 */
      __pyx_t_1 = (__pyx_v_v->strandA == 3);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":773
 * 
 *             elif v.strandA == 3:
 *                 v.breakA = v.endA             # <<<<<<<<<<<<<<
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":774
 *             elif v.strandA == 3:
 *                 v.breakA = v.endA
 *                 if v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 */
        __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":775
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB = v.endB
 *                 if v.right_clipB:
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":774
 *             elif v.strandA == 3:
 *                 v.breakA = v.endA
 *                 if v.right_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 */
        }

        /* "dysgu/sv_category.pyx":776
 *                 if v.right_clipA:
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB             # <<<<<<<<<<<<<<
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->endB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":777
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 */
        __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":778
 *                 v.breakB = v.endB
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 v.join_type = "3to3"
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":777
 *                     v.breakA_precise = 1
 *                 v.breakB = v.endB
 *                 if v.right_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 */
        }

        /* "dysgu/sv_category.pyx":779
 *                 if v.right_clipB:
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "3to3"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":780
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 *                 v.join_type = "3to3"             # <<<<<<<<<<<<<<
 * 
 *             else:
 */
        __Pyx_INCREF(__pyx_kp_u_3to3);
        __Pyx_GIVEREF(__pyx_kp_u_3to3);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_3to3;

        /* "dysgu/sv_category.pyx":772
 *                 v.join_type = "5to5"
 * 
 *             elif v.strandA == 3:             # <<<<<<<<<<<<<<
 *                 v.breakA = v.endA
 *                 if v.right_clipA:
 */
        goto __pyx_L41;
      }

      /* "dysgu/sv_category.pyx":783
 * 
 *             else:
 *                 v.breakA = v.posA             # <<<<<<<<<<<<<<
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1
 */
      /*else*/ {
        __pyx_t_3 = __pyx_v_v->posA;
        __pyx_v_v->breakA = __pyx_t_3;

        /* "dysgu/sv_category.pyx":784
 *             else:
 *                 v.breakA = v.posA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB
 */
        __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":785
 *                 v.breakA = v.posA
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *                 v.breakB = v.posB
 *                 if v.left_clipB:
 */
          __pyx_v_v->breakA_precise = 1;

          /* "dysgu/sv_category.pyx":784
 *             else:
 *                 v.breakA = v.posA
 *                 if v.left_clipA:             # <<<<<<<<<<<<<<
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB
 */
        }

        /* "dysgu/sv_category.pyx":786
 *                 if v.left_clipA:
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB             # <<<<<<<<<<<<<<
 *                 if v.left_clipB:
 *                     v.breakB_precise = 1
 */
        __pyx_t_3 = __pyx_v_v->posB;
        __pyx_v_v->breakB = __pyx_t_3;

        /* "dysgu/sv_category.pyx":787
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 */
        __pyx_t_1 = (__pyx_v_v->left_clipB != 0);
        if (__pyx_t_1) {

          /* "dysgu/sv_category.pyx":788
 *                 v.breakB = v.posB
 *                 if v.left_clipB:
 *                     v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *                 v.svtype = "INV"
 *                 v.join_type = "5to5"
 */
          __pyx_v_v->breakB_precise = 1;

          /* "dysgu/sv_category.pyx":787
 *                     v.breakA_precise = 1
 *                 v.breakB = v.posB
 *                 if v.left_clipB:             # <<<<<<<<<<<<<<
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 */
        }

        /* "dysgu/sv_category.pyx":789
 *                 if v.left_clipB:
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"             # <<<<<<<<<<<<<<
 *                 v.join_type = "5to5"
 * 
 */
        __Pyx_INCREF(__pyx_n_u_INV);
        __Pyx_GIVEREF(__pyx_n_u_INV);
        __Pyx_GOTREF(__pyx_v_v->svtype);
        __Pyx_DECREF(__pyx_v_v->svtype);
        __pyx_v_v->svtype = __pyx_n_u_INV;

        /* "dysgu/sv_category.pyx":790
 *                     v.breakB_precise = 1
 *                 v.svtype = "INV"
 *                 v.join_type = "5to5"             # <<<<<<<<<<<<<<
 * 
 * 
 */
        __Pyx_INCREF(__pyx_kp_u_5to5);
        __Pyx_GIVEREF(__pyx_kp_u_5to5);
        __Pyx_GOTREF(__pyx_v_v->join_type);
        __Pyx_DECREF(__pyx_v_v->join_type);
        __pyx_v_v->join_type = __pyx_kp_u_5to5;
      }
      __pyx_L41:;

      /* "dysgu/sv_category.pyx":709
 *             v.join_type = "5to3"
 * 
 *         elif v.strandA == v.strandB:  # INV type             # <<<<<<<<<<<<<<
 * 
 *             if is_overlapping(v.posA, v.endA, v.posB, v.endB):  # Nested DUP
 */
    }
    __pyx_L32:;
  }
  __pyx_L3:;

  /* "dysgu/sv_category.pyx":592
 * 
 * 
 * cdef void different_read(AlignmentItem v):             # <<<<<<<<<<<<<<
 * 
 *     if v.posA < v.posB or (v.posA == v.posB and v.endA <= v.endB):  # A is first
 */

  /* function exit code */
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.different_read", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_L0:;
  __Pyx_RefNannyFinishContext();
}

/* "dysgu/sv_category.pyx":793
 * 
 * 
 * cdef void translocation(AlignmentItem v):             # <<<<<<<<<<<<<<
 * 
 *     v.svtype = "TRA"
 */

static void __pyx_f_5dysgu_11sv_category_translocation(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_v) {
  int __pyx_v_query_gap;
  int __pyx_v_query_overlap;
  __Pyx_RefNannyDeclarations
  int __pyx_t_1;
  int __pyx_t_2;
  PyObject *__pyx_t_3 = NULL;
  Py_ssize_t __pyx_t_4;
  Py_UCS4 __pyx_t_5;
  PyObject *__pyx_t_6 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("translocation", 1);

  /* "dysgu/sv_category.pyx":795
 * cdef void translocation(AlignmentItem v):
 * 
 *     v.svtype = "TRA"             # <<<<<<<<<<<<<<
 * 
 *     if v.left_clipA:
 */
  __Pyx_INCREF(__pyx_n_u_TRA);
  __Pyx_GIVEREF(__pyx_n_u_TRA);
  __Pyx_GOTREF(__pyx_v_v->svtype);
  __Pyx_DECREF(__pyx_v_v->svtype);
  __pyx_v_v->svtype = __pyx_n_u_TRA;

  /* "dysgu/sv_category.pyx":797
 *     v.svtype = "TRA"
 * 
 *     if v.left_clipA:             # <<<<<<<<<<<<<<
 *         v.breakA = v.posA
 *         v.breakA_precise = 1
 */
  __pyx_t_1 = (__pyx_v_v->left_clipA != 0);
  if (__pyx_t_1) {

    /* "dysgu/sv_category.pyx":798
 * 
 *     if v.left_clipA:
 *         v.breakA = v.posA             # <<<<<<<<<<<<<<
 *         v.breakA_precise = 1
 *     elif v.right_clipA:
 */
    __pyx_t_2 = __pyx_v_v->posA;
    __pyx_v_v->breakA = __pyx_t_2;

    /* "dysgu/sv_category.pyx":799
 *     if v.left_clipA:
 *         v.breakA = v.posA
 *         v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *     elif v.right_clipA:
 *         v.breakA = v.endA
 */
    __pyx_v_v->breakA_precise = 1;

    /* "dysgu/sv_category.pyx":797
 *     v.svtype = "TRA"
 * 
 *     if v.left_clipA:             # <<<<<<<<<<<<<<
 *         v.breakA = v.posA
 *         v.breakA_precise = 1
 */
    goto __pyx_L3;
  }

  /* "dysgu/sv_category.pyx":800
 *         v.breakA = v.posA
 *         v.breakA_precise = 1
 *     elif v.right_clipA:             # <<<<<<<<<<<<<<
 *         v.breakA = v.endA
 *         v.breakA_precise = 1
 */
  __pyx_t_1 = (__pyx_v_v->right_clipA != 0);
  if (__pyx_t_1) {

    /* "dysgu/sv_category.pyx":801
 *         v.breakA_precise = 1
 *     elif v.right_clipA:
 *         v.breakA = v.endA             # <<<<<<<<<<<<<<
 *         v.breakA_precise = 1
 *     else:
 */
    __pyx_t_2 = __pyx_v_v->endA;
    __pyx_v_v->breakA = __pyx_t_2;

    /* "dysgu/sv_category.pyx":802
 *     elif v.right_clipA:
 *         v.breakA = v.endA
 *         v.breakA_precise = 1             # <<<<<<<<<<<<<<
 *     else:
 *         v.breakA = v.posA
 */
    __pyx_v_v->breakA_precise = 1;

    /* "dysgu/sv_category.pyx":800
 *         v.breakA = v.posA
 *         v.breakA_precise = 1
 *     elif v.right_clipA:             # <<<<<<<<<<<<<<
 *         v.breakA = v.endA
 *         v.breakA_precise = 1
 */
    goto __pyx_L3;
  }

  /* "dysgu/sv_category.pyx":804
 *         v.breakA_precise = 1
 *     else:
 *         v.breakA = v.posA             # <<<<<<<<<<<<<<
 *         v.breakA_precise = 1
 * 
 */
  /*else*/ {
    __pyx_t_2 = __pyx_v_v->posA;
    __pyx_v_v->breakA = __pyx_t_2;

    /* "dysgu/sv_category.pyx":805
 *     else:
 *         v.breakA = v.posA
 *         v.breakA_precise = 1             # <<<<<<<<<<<<<<
 * 
 *     if v.left_clipB:
 */
    __pyx_v_v->breakA_precise = 1;
  }
  __pyx_L3:;

  /* "dysgu/sv_category.pyx":807
 *         v.breakA_precise = 1
 * 
 *     if v.left_clipB:             # <<<<<<<<<<<<<<
 *         v.breakB = v.posB
 *         v.breakB_precise = 1
 */
  __pyx_t_1 = (__pyx_v_v->left_clipB != 0);
  if (__pyx_t_1) {

    /* "dysgu/sv_category.pyx":808
 * 
 *     if v.left_clipB:
 *         v.breakB = v.posB             # <<<<<<<<<<<<<<
 *         v.breakB_precise = 1
 *     elif v.right_clipB:
 */
    __pyx_t_2 = __pyx_v_v->posB;
    __pyx_v_v->breakB = __pyx_t_2;

    /* "dysgu/sv_category.pyx":809
 *     if v.left_clipB:
 *         v.breakB = v.posB
 *         v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *     elif v.right_clipB:
 *         v.breakB = v.endB
 */
    __pyx_v_v->breakB_precise = 1;

    /* "dysgu/sv_category.pyx":807
 *         v.breakA_precise = 1
 * 
 *     if v.left_clipB:             # <<<<<<<<<<<<<<
 *         v.breakB = v.posB
 *         v.breakB_precise = 1
 */
    goto __pyx_L4;
  }

  /* "dysgu/sv_category.pyx":810
 *         v.breakB = v.posB
 *         v.breakB_precise = 1
 *     elif v.right_clipB:             # <<<<<<<<<<<<<<
 *         v.breakB = v.endB
 *         v.breakB_precise = 1
 */
  __pyx_t_1 = (__pyx_v_v->right_clipB != 0);
  if (__pyx_t_1) {

    /* "dysgu/sv_category.pyx":811
 *         v.breakB_precise = 1
 *     elif v.right_clipB:
 *         v.breakB = v.endB             # <<<<<<<<<<<<<<
 *         v.breakB_precise = 1
 *     else:
 */
    __pyx_t_2 = __pyx_v_v->endB;
    __pyx_v_v->breakB = __pyx_t_2;

    /* "dysgu/sv_category.pyx":812
 *     elif v.right_clipB:
 *         v.breakB = v.endB
 *         v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *     else:
 *         v.breakB = v.posB
 */
    __pyx_v_v->breakB_precise = 1;

    /* "dysgu/sv_category.pyx":810
 *         v.breakB = v.posB
 *         v.breakB_precise = 1
 *     elif v.right_clipB:             # <<<<<<<<<<<<<<
 *         v.breakB = v.endB
 *         v.breakB_precise = 1
 */
    goto __pyx_L4;
  }

  /* "dysgu/sv_category.pyx":814
 *         v.breakB_precise = 1
 *     else:
 *         v.breakB = v.posB             # <<<<<<<<<<<<<<
 *         v.breakB_precise = 1
 *     v.join_type = f"{v.strandA}to{v.strandB}"
 */
  /*else*/ {
    __pyx_t_2 = __pyx_v_v->posB;
    __pyx_v_v->breakB = __pyx_t_2;

    /* "dysgu/sv_category.pyx":815
 *     else:
 *         v.breakB = v.posB
 *         v.breakB_precise = 1             # <<<<<<<<<<<<<<
 *     v.join_type = f"{v.strandA}to{v.strandB}"
 * 
 */
    __pyx_v_v->breakB_precise = 1;
  }
  __pyx_L4:;

  /* "dysgu/sv_category.pyx":816
 *         v.breakB = v.posB
 *         v.breakB_precise = 1
 *     v.join_type = f"{v.strandA}to{v.strandB}"             # <<<<<<<<<<<<<<
 * 
 *     cdef int query_gap = 0
 */
  __pyx_t_3 = PyTuple_New(3); if (unlikely(!__pyx_t_3)) __PYX_ERR(2, 816, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_3);
  __pyx_t_4 = 0;
  __pyx_t_5 = 127;
  __pyx_t_6 = __Pyx_PyUnicode_From_int(__pyx_v_v->strandA, 0, ' ', 'd'); if (unlikely(!__pyx_t_6)) __PYX_ERR(2, 816, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_6);
  __pyx_t_4 += __Pyx_PyUnicode_GET_LENGTH(__pyx_t_6);
  __Pyx_GIVEREF(__pyx_t_6);
  PyTuple_SET_ITEM(__pyx_t_3, 0, __pyx_t_6);
  __pyx_t_6 = 0;
  __Pyx_INCREF(__pyx_n_u_to);
  __pyx_t_4 += 2;
  __Pyx_GIVEREF(__pyx_n_u_to);
  PyTuple_SET_ITEM(__pyx_t_3, 1, __pyx_n_u_to);
  __pyx_t_6 = __Pyx_PyUnicode_From_int(__pyx_v_v->strandB, 0, ' ', 'd'); if (unlikely(!__pyx_t_6)) __PYX_ERR(2, 816, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_6);
  __pyx_t_4 += __Pyx_PyUnicode_GET_LENGTH(__pyx_t_6);
  __Pyx_GIVEREF(__pyx_t_6);
  PyTuple_SET_ITEM(__pyx_t_3, 2, __pyx_t_6);
  __pyx_t_6 = 0;
  __pyx_t_6 = __Pyx_PyUnicode_Join(__pyx_t_3, 3, __pyx_t_4, __pyx_t_5); if (unlikely(!__pyx_t_6)) __PYX_ERR(2, 816, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_6);
  __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
  __Pyx_GIVEREF(__pyx_t_6);
  __Pyx_GOTREF(__pyx_v_v->join_type);
  __Pyx_DECREF(__pyx_v_v->join_type);
  __pyx_v_v->join_type = ((PyObject*)__pyx_t_6);
  __pyx_t_6 = 0;

  /* "dysgu/sv_category.pyx":818
 *     v.join_type = f"{v.strandA}to{v.strandB}"
 * 
 *     cdef int query_gap = 0             # <<<<<<<<<<<<<<
 *     cdef int query_overlap = 0
 *     if v.rA == v.rB:  # same read
 */
  __pyx_v_query_gap = 0;

  /* "dysgu/sv_category.pyx":819
 * 
 *     cdef int query_gap = 0
 *     cdef int query_overlap = 0             # <<<<<<<<<<<<<<
 *     if v.rA == v.rB:  # same read
 *         if v.b_qstart < v.a_qstart:  # B is first on query
 */
  __pyx_v_query_overlap = 0;

  /* "dysgu/sv_category.pyx":820
 *     cdef int query_gap = 0
 *     cdef int query_overlap = 0
 *     if v.rA == v.rB:  # same read             # <<<<<<<<<<<<<<
 *         if v.b_qstart < v.a_qstart:  # B is first on query
 *             query_gap = v.a_qstart - v.b_qend
 */
  __pyx_t_1 = (__pyx_v_v->rA == __pyx_v_v->rB);
  if (__pyx_t_1) {

    /* "dysgu/sv_category.pyx":821
 *     cdef int query_overlap = 0
 *     if v.rA == v.rB:  # same read
 *         if v.b_qstart < v.a_qstart:  # B is first on query             # <<<<<<<<<<<<<<
 *             query_gap = v.a_qstart - v.b_qend
 *         else:
 */
    __pyx_t_1 = (__pyx_v_v->b_qstart < __pyx_v_v->a_qstart);
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":822
 *     if v.rA == v.rB:  # same read
 *         if v.b_qstart < v.a_qstart:  # B is first on query
 *             query_gap = v.a_qstart - v.b_qend             # <<<<<<<<<<<<<<
 *         else:
 *             query_gap = v.b_qstart - v.a_qend
 */
      __pyx_v_query_gap = (__pyx_v_v->a_qstart - __pyx_v_v->b_qend);

      /* "dysgu/sv_category.pyx":821
 *     cdef int query_overlap = 0
 *     if v.rA == v.rB:  # same read
 *         if v.b_qstart < v.a_qstart:  # B is first on query             # <<<<<<<<<<<<<<
 *             query_gap = v.a_qstart - v.b_qend
 *         else:
 */
      goto __pyx_L6;
    }

    /* "dysgu/sv_category.pyx":824
 *             query_gap = v.a_qstart - v.b_qend
 *         else:
 *             query_gap = v.b_qstart - v.a_qend             # <<<<<<<<<<<<<<
 *         if query_gap < 0:
 *             query_overlap = abs(query_gap)
 */
    /*else*/ {
      __pyx_v_query_gap = (__pyx_v_v->b_qstart - __pyx_v_v->a_qend);
    }
    __pyx_L6:;

    /* "dysgu/sv_category.pyx":825
 *         else:
 *             query_gap = v.b_qstart - v.a_qend
 *         if query_gap < 0:             # <<<<<<<<<<<<<<
 *             query_overlap = abs(query_gap)
 *             query_gap = 0
 */
    __pyx_t_1 = (__pyx_v_query_gap < 0);
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":826
 *             query_gap = v.b_qstart - v.a_qend
 *         if query_gap < 0:
 *             query_overlap = abs(query_gap)             # <<<<<<<<<<<<<<
 *             query_gap = 0
 * 
 */
      __pyx_t_2 = abs(__pyx_v_query_gap); if (unlikely(__pyx_t_2 == ((int)-1))) __PYX_ERR(2, 826, __pyx_L1_error)
      __pyx_v_query_overlap = __pyx_t_2;

      /* "dysgu/sv_category.pyx":827
 *         if query_gap < 0:
 *             query_overlap = abs(query_gap)
 *             query_gap = 0             # <<<<<<<<<<<<<<
 * 
 *     v.query_gap = query_gap
 */
      __pyx_v_query_gap = 0;

      /* "dysgu/sv_category.pyx":825
 *         else:
 *             query_gap = v.b_qstart - v.a_qend
 *         if query_gap < 0:             # <<<<<<<<<<<<<<
 *             query_overlap = abs(query_gap)
 *             query_gap = 0
 */
    }

    /* "dysgu/sv_category.pyx":820
 *     cdef int query_gap = 0
 *     cdef int query_overlap = 0
 *     if v.rA == v.rB:  # same read             # <<<<<<<<<<<<<<
 *         if v.b_qstart < v.a_qstart:  # B is first on query
 *             query_gap = v.a_qstart - v.b_qend
 */
  }

  /* "dysgu/sv_category.pyx":829
 *             query_gap = 0
 * 
 *     v.query_gap = query_gap             # <<<<<<<<<<<<<<
 *     v.query_overlap = query_overlap
 * 
 */
  __pyx_v_v->query_gap = __pyx_v_query_gap;

  /* "dysgu/sv_category.pyx":830
 * 
 *     v.query_gap = query_gap
 *     v.query_overlap = query_overlap             # <<<<<<<<<<<<<<
 * 
 * cdef void classify_d(AlignmentItem v):  #, debug=False):
 */
  __pyx_v_v->query_overlap = __pyx_v_query_overlap;

  /* "dysgu/sv_category.pyx":793
 * 
 * 
 * cdef void translocation(AlignmentItem v):             # <<<<<<<<<<<<<<
 * 
 *     v.svtype = "TRA"
 */

  /* function exit code */
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_3);
  __Pyx_XDECREF(__pyx_t_6);
  __Pyx_AddTraceback("dysgu.sv_category.translocation", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_L0:;
  __Pyx_RefNannyFinishContext();
}

/* "dysgu/sv_category.pyx":832
 *     v.query_overlap = query_overlap
 * 
 * cdef void classify_d(AlignmentItem v):  #, debug=False):             # <<<<<<<<<<<<<<
 * 
 *     v.breakA_precise = 0
 */

static void __pyx_f_5dysgu_11sv_category_classify_d(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *__pyx_v_v) {
  int __pyx_t_1;
  int __pyx_t_2;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;

  /* "dysgu/sv_category.pyx":834
 * cdef void classify_d(AlignmentItem v):  #, debug=False):
 * 
 *     v.breakA_precise = 0             # <<<<<<<<<<<<<<
 *     v.breakB_precise = 0
 *     if v.chrA != v.chrB:
 */
  __pyx_v_v->breakA_precise = 0;

  /* "dysgu/sv_category.pyx":835
 * 
 *     v.breakA_precise = 0
 *     v.breakB_precise = 0             # <<<<<<<<<<<<<<
 *     if v.chrA != v.chrB:
 *         translocation(v)
 */
  __pyx_v_v->breakB_precise = 0;

  /* "dysgu/sv_category.pyx":836
 *     v.breakA_precise = 0
 *     v.breakB_precise = 0
 *     if v.chrA != v.chrB:             # <<<<<<<<<<<<<<
 *         translocation(v)
 *     else:  # Intra-chromosomal. Find join type first, different for pri-sup, pri-pri
 */
  __pyx_t_1 = (__pyx_v_v->chrA != __pyx_v_v->chrB);
  if (__pyx_t_1) {

    /* "dysgu/sv_category.pyx":837
 *     v.breakB_precise = 0
 *     if v.chrA != v.chrB:
 *         translocation(v)             # <<<<<<<<<<<<<<
 *     else:  # Intra-chromosomal. Find join type first, different for pri-sup, pri-pri
 *         if v.priA and v.priB:  # Both primary
 */
    __pyx_f_5dysgu_11sv_category_translocation(__pyx_v_v); if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 837, __pyx_L1_error)

    /* "dysgu/sv_category.pyx":836
 *     v.breakA_precise = 0
 *     v.breakB_precise = 0
 *     if v.chrA != v.chrB:             # <<<<<<<<<<<<<<
 *         translocation(v)
 *     else:  # Intra-chromosomal. Find join type first, different for pri-sup, pri-pri
 */
    goto __pyx_L3;
  }

  /* "dysgu/sv_category.pyx":839
 *         translocation(v)
 *     else:  # Intra-chromosomal. Find join type first, different for pri-sup, pri-pri
 *         if v.priA and v.priB:  # Both primary             # <<<<<<<<<<<<<<
 *             two_primary(v)
 *         else:  # One is a supplementary
 */
  /*else*/ {
    __pyx_t_2 = (__pyx_v_v->priA != 0);
    if (__pyx_t_2) {
    } else {
      __pyx_t_1 = __pyx_t_2;
      goto __pyx_L5_bool_binop_done;
    }
    __pyx_t_2 = (__pyx_v_v->priB != 0);
    __pyx_t_1 = __pyx_t_2;
    __pyx_L5_bool_binop_done:;
    if (__pyx_t_1) {

      /* "dysgu/sv_category.pyx":840
 *     else:  # Intra-chromosomal. Find join type first, different for pri-sup, pri-pri
 *         if v.priA and v.priB:  # Both primary
 *             two_primary(v)             # <<<<<<<<<<<<<<
 *         else:  # One is a supplementary
 *             if v.rA == v.rB:
 */
      __pyx_f_5dysgu_11sv_category_two_primary(__pyx_v_v); if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 840, __pyx_L1_error)

      /* "dysgu/sv_category.pyx":839
 *         translocation(v)
 *     else:  # Intra-chromosomal. Find join type first, different for pri-sup, pri-pri
 *         if v.priA and v.priB:  # Both primary             # <<<<<<<<<<<<<<
 *             two_primary(v)
 *         else:  # One is a supplementary
 */
      goto __pyx_L4;
    }

    /* "dysgu/sv_category.pyx":842
 *             two_primary(v)
 *         else:  # One is a supplementary
 *             if v.rA == v.rB:             # <<<<<<<<<<<<<<
 *                 same_read(v)
 *             else:
 */
    /*else*/ {
      __pyx_t_1 = (__pyx_v_v->rA == __pyx_v_v->rB);
      if (__pyx_t_1) {

        /* "dysgu/sv_category.pyx":843
 *         else:  # One is a supplementary
 *             if v.rA == v.rB:
 *                 same_read(v)             # <<<<<<<<<<<<<<
 *             else:
 *                 different_read(v)
 */
        __pyx_f_5dysgu_11sv_category_same_read(__pyx_v_v); if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 843, __pyx_L1_error)

        /* "dysgu/sv_category.pyx":842
 *             two_primary(v)
 *         else:  # One is a supplementary
 *             if v.rA == v.rB:             # <<<<<<<<<<<<<<
 *                 same_read(v)
 *             else:
 */
        goto __pyx_L7;
      }

      /* "dysgu/sv_category.pyx":845
 *                 same_read(v)
 *             else:
 *                 different_read(v)             # <<<<<<<<<<<<<<
 * 
 * 
 */
      /*else*/ {
        __pyx_f_5dysgu_11sv_category_different_read(__pyx_v_v); if (unlikely(PyErr_Occurred())) __PYX_ERR(2, 845, __pyx_L1_error)
      }
      __pyx_L7:;
    }
    __pyx_L4:;
  }
  __pyx_L3:;

  /* "dysgu/sv_category.pyx":832
 *     v.query_overlap = query_overlap
 * 
 * cdef void classify_d(AlignmentItem v):  #, debug=False):             # <<<<<<<<<<<<<<
 * 
 *     v.breakA_precise = 0
 */

  /* function exit code */
  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_AddTraceback("dysgu.sv_category.classify_d", __pyx_clineno, __pyx_lineno, __pyx_filename);
  __pyx_L0:;
}

static PyObject *__pyx_tp_new_5dysgu_11sv_category_AlignmentItem(PyTypeObject *t, PyObject *a, PyObject *k) {
  struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *p;
  PyObject *o;
  #if CYTHON_COMPILING_IN_LIMITED_API
  allocfunc alloc_func = (allocfunc)PyType_GetSlot(t, Py_tp_alloc);
  o = alloc_func(t, 0);
  #else
  if (likely(!__Pyx_PyType_HasFeature(t, Py_TPFLAGS_IS_ABSTRACT))) {
    o = (*t->tp_alloc)(t, 0);
  } else {
    o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0);
  }
  if (unlikely(!o)) return 0;
  #endif
  p = ((struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)o);
  p->svtype = ((PyObject*)Py_None); Py_INCREF(Py_None);
  p->join_type = ((PyObject*)Py_None); Py_INCREF(Py_None);
  p->read_a = Py_None; Py_INCREF(Py_None);
  p->read_b = Py_None; Py_INCREF(Py_None);
  p->a_node_info = Py_None; Py_INCREF(Py_None);
  p->b_node_info = Py_None; Py_INCREF(Py_None);
  if (unlikely(__pyx_pw_5dysgu_11sv_category_13AlignmentItem_1__cinit__(o, a, k) < 0)) goto bad;
  return o;
  bad:
  Py_DECREF(o); o = 0;
  return NULL;
}

static void __pyx_tp_dealloc_5dysgu_11sv_category_AlignmentItem(PyObject *o) {
  struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *p = (struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)o;
  #if CYTHON_USE_TP_FINALIZE
  if (unlikely((PY_VERSION_HEX >= 0x03080000 || __Pyx_PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE)) && __Pyx_PyObject_GetSlot(o, tp_finalize, destructor)) && !__Pyx_PyObject_GC_IsFinalized(o)) {
    if (__Pyx_PyObject_GetSlot(o, tp_dealloc, destructor) == __pyx_tp_dealloc_5dysgu_11sv_category_AlignmentItem) {
      if (PyObject_CallFinalizerFromDealloc(o)) return;
    }
  }
  #endif
  PyObject_GC_UnTrack(o);
  Py_CLEAR(p->svtype);
  Py_CLEAR(p->join_type);
  Py_CLEAR(p->read_a);
  Py_CLEAR(p->read_b);
  Py_CLEAR(p->a_node_info);
  Py_CLEAR(p->b_node_info);
  #if CYTHON_USE_TYPE_SLOTS || CYTHON_COMPILING_IN_PYPY
  (*Py_TYPE(o)->tp_free)(o);
  #else
  {
    freefunc tp_free = (freefunc)PyType_GetSlot(Py_TYPE(o), Py_tp_free);
    if (tp_free) tp_free(o);
  }
  #endif
}

static int __pyx_tp_traverse_5dysgu_11sv_category_AlignmentItem(PyObject *o, visitproc v, void *a) {
  int e;
  struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *p = (struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)o;
  if (p->read_a) {
    e = (*v)(p->read_a, a); if (e) return e;
  }
  if (p->read_b) {
    e = (*v)(p->read_b, a); if (e) return e;
  }
  if (p->a_node_info) {
    e = (*v)(p->a_node_info, a); if (e) return e;
  }
  if (p->b_node_info) {
    e = (*v)(p->b_node_info, a); if (e) return e;
  }
  return 0;
}

static int __pyx_tp_clear_5dysgu_11sv_category_AlignmentItem(PyObject *o) {
  PyObject* tmp;
  struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *p = (struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)o;
  tmp = ((PyObject*)p->read_a);
  p->read_a = Py_None; Py_INCREF(Py_None);
  Py_XDECREF(tmp);
  tmp = ((PyObject*)p->read_b);
  p->read_b = Py_None; Py_INCREF(Py_None);
  Py_XDECREF(tmp);
  tmp = ((PyObject*)p->a_node_info);
  p->a_node_info = Py_None; Py_INCREF(Py_None);
  Py_XDECREF(tmp);
  tmp = ((PyObject*)p->b_node_info);
  p->b_node_info = Py_None; Py_INCREF(Py_None);
  Py_XDECREF(tmp);
  return 0;
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_chrA(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4chrA_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_chrA(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4chrA_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_chrB(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4chrB_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_chrB(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4chrB_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_priA(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4priA_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_priA(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4priA_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_priB(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4priB_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_priB(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4priB_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_rA(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_2rA_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_rA(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_2rA_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_rB(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_2rB_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_rB(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_2rB_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_posA(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4posA_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_posA(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4posA_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_endA(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4endA_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_endA(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4endA_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_posB(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4posB_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_posB(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4posB_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_endB(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4endB_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_endB(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_4endB_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_strandA(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_7strandA_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_strandA(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_7strandA_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_strandB(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_7strandB_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_strandB(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_7strandB_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_left_clipA(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_10left_clipA_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_left_clipA(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_10left_clipA_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_right_clipA(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11right_clipA_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_right_clipA(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11right_clipA_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_left_clipB(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_10left_clipB_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_left_clipB(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_10left_clipB_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_right_clipB(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11right_clipB_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_right_clipB(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11right_clipB_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_breakA_precise(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_14breakA_precise_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_breakA_precise(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_14breakA_precise_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_breakB_precise(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_14breakB_precise_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_breakB_precise(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_14breakB_precise_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_breakA(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6breakA_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_breakA(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6breakA_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_breakB(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6breakB_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_breakB(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6breakB_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_a_qstart(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_8a_qstart_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_a_qstart(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_8a_qstart_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_a_qend(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6a_qend_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_a_qend(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6a_qend_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_b_qstart(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_8b_qstart_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_b_qstart(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_8b_qstart_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_b_qend(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6b_qend_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_b_qend(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6b_qend_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_a_len(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_5a_len_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_a_len(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_5a_len_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_b_len(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_5b_len_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_b_len(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_5b_len_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_query_gap(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_9query_gap_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_query_gap(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_9query_gap_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_read_overlaps_mate(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_18read_overlaps_mate_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_read_overlaps_mate(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_18read_overlaps_mate_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_size_inferred(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_13size_inferred_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_size_inferred(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_13size_inferred_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_query_overlap(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_13query_overlap_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_query_overlap(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_13query_overlap_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_inferred_sv_len(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_15inferred_sv_len_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_inferred_sv_len(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_15inferred_sv_len_3__set__(o, v);
  }
  else {
    PyErr_SetString(PyExc_NotImplementedError, "__del__");
    return -1;
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_svtype(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6svtype_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_svtype(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6svtype_3__set__(o, v);
  }
  else {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6svtype_5__del__(o);
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_join_type(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_9join_type_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_join_type(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_9join_type_3__set__(o, v);
  }
  else {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_9join_type_5__del__(o);
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_read_a(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_a_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_read_a(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_a_3__set__(o, v);
  }
  else {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_a_5__del__(o);
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_read_b(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_b_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_read_b(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_b_3__set__(o, v);
  }
  else {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_6read_b_5__del__(o);
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_a_node_info(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11a_node_info_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_a_node_info(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11a_node_info_3__set__(o, v);
  }
  else {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11a_node_info_5__del__(o);
  }
}

static PyObject *__pyx_getprop_5dysgu_11sv_category_13AlignmentItem_b_node_info(PyObject *o, CYTHON_UNUSED void *x) {
  return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11b_node_info_1__get__(o);
}

static int __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_b_node_info(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) {
  if (v) {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11b_node_info_3__set__(o, v);
  }
  else {
    return __pyx_pw_5dysgu_11sv_category_13AlignmentItem_11b_node_info_5__del__(o);
  }
}

static PyMethodDef __pyx_methods_5dysgu_11sv_category_AlignmentItem[] = {
  {"__reduce_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5dysgu_11sv_category_13AlignmentItem_3__reduce_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, 0},
  {"__setstate_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5dysgu_11sv_category_13AlignmentItem_5__setstate_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, 0},
  {0, 0, 0, 0}
};

static struct PyGetSetDef __pyx_getsets_5dysgu_11sv_category_AlignmentItem[] = {
  {(char *)"chrA", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_chrA, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_chrA, (char *)0, 0},
  {(char *)"chrB", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_chrB, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_chrB, (char *)0, 0},
  {(char *)"priA", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_priA, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_priA, (char *)0, 0},
  {(char *)"priB", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_priB, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_priB, (char *)0, 0},
  {(char *)"rA", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_rA, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_rA, (char *)0, 0},
  {(char *)"rB", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_rB, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_rB, (char *)0, 0},
  {(char *)"posA", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_posA, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_posA, (char *)0, 0},
  {(char *)"endA", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_endA, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_endA, (char *)0, 0},
  {(char *)"posB", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_posB, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_posB, (char *)0, 0},
  {(char *)"endB", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_endB, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_endB, (char *)0, 0},
  {(char *)"strandA", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_strandA, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_strandA, (char *)0, 0},
  {(char *)"strandB", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_strandB, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_strandB, (char *)0, 0},
  {(char *)"left_clipA", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_left_clipA, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_left_clipA, (char *)0, 0},
  {(char *)"right_clipA", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_right_clipA, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_right_clipA, (char *)0, 0},
  {(char *)"left_clipB", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_left_clipB, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_left_clipB, (char *)0, 0},
  {(char *)"right_clipB", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_right_clipB, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_right_clipB, (char *)0, 0},
  {(char *)"breakA_precise", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_breakA_precise, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_breakA_precise, (char *)0, 0},
  {(char *)"breakB_precise", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_breakB_precise, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_breakB_precise, (char *)0, 0},
  {(char *)"breakA", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_breakA, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_breakA, (char *)0, 0},
  {(char *)"breakB", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_breakB, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_breakB, (char *)0, 0},
  {(char *)"a_qstart", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_a_qstart, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_a_qstart, (char *)0, 0},
  {(char *)"a_qend", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_a_qend, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_a_qend, (char *)0, 0},
  {(char *)"b_qstart", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_b_qstart, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_b_qstart, (char *)0, 0},
  {(char *)"b_qend", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_b_qend, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_b_qend, (char *)0, 0},
  {(char *)"a_len", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_a_len, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_a_len, (char *)0, 0},
  {(char *)"b_len", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_b_len, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_b_len, (char *)0, 0},
  {(char *)"query_gap", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_query_gap, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_query_gap, (char *)0, 0},
  {(char *)"read_overlaps_mate", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_read_overlaps_mate, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_read_overlaps_mate, (char *)0, 0},
  {(char *)"size_inferred", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_size_inferred, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_size_inferred, (char *)0, 0},
  {(char *)"query_overlap", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_query_overlap, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_query_overlap, (char *)0, 0},
  {(char *)"inferred_sv_len", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_inferred_sv_len, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_inferred_sv_len, (char *)0, 0},
  {(char *)"svtype", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_svtype, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_svtype, (char *)0, 0},
  {(char *)"join_type", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_join_type, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_join_type, (char *)0, 0},
  {(char *)"read_a", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_read_a, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_read_a, (char *)0, 0},
  {(char *)"read_b", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_read_b, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_read_b, (char *)0, 0},
  {(char *)"a_node_info", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_a_node_info, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_a_node_info, (char *)0, 0},
  {(char *)"b_node_info", __pyx_getprop_5dysgu_11sv_category_13AlignmentItem_b_node_info, __pyx_setprop_5dysgu_11sv_category_13AlignmentItem_b_node_info, (char *)0, 0},
  {0, 0, 0, 0, 0}
};
#if CYTHON_USE_TYPE_SPECS
static PyType_Slot __pyx_type_5dysgu_11sv_category_AlignmentItem_slots[] = {
  {Py_tp_dealloc, (void *)__pyx_tp_dealloc_5dysgu_11sv_category_AlignmentItem},
  {Py_tp_doc, (void *)PyDoc_STR("Data holder for classifying alignments into SV types")},
  {Py_tp_traverse, (void *)__pyx_tp_traverse_5dysgu_11sv_category_AlignmentItem},
  {Py_tp_clear, (void *)__pyx_tp_clear_5dysgu_11sv_category_AlignmentItem},
  {Py_tp_methods, (void *)__pyx_methods_5dysgu_11sv_category_AlignmentItem},
  {Py_tp_getset, (void *)__pyx_getsets_5dysgu_11sv_category_AlignmentItem},
  {Py_tp_new, (void *)__pyx_tp_new_5dysgu_11sv_category_AlignmentItem},
  {0, 0},
};
static PyType_Spec __pyx_type_5dysgu_11sv_category_AlignmentItem_spec = {
  "dysgu.sv_category.AlignmentItem",
  sizeof(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem),
  0,
  Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC,
  __pyx_type_5dysgu_11sv_category_AlignmentItem_slots,
};
#else

static PyTypeObject __pyx_type_5dysgu_11sv_category_AlignmentItem = {
  PyVarObject_HEAD_INIT(0, 0)
  "dysgu.sv_category.""AlignmentItem", /*tp_name*/
  sizeof(struct __pyx_obj_5dysgu_11sv_category_AlignmentItem), /*tp_basicsize*/
  0, /*tp_itemsize*/
  __pyx_tp_dealloc_5dysgu_11sv_category_AlignmentItem, /*tp_dealloc*/
  #if PY_VERSION_HEX < 0x030800b4
  0, /*tp_print*/
  #endif
  #if PY_VERSION_HEX >= 0x030800b4
  0, /*tp_vectorcall_offset*/
  #endif
  0, /*tp_getattr*/
  0, /*tp_setattr*/
  #if PY_MAJOR_VERSION < 3
  0, /*tp_compare*/
  #endif
  #if PY_MAJOR_VERSION >= 3
  0, /*tp_as_async*/
  #endif
  0, /*tp_repr*/
  0, /*tp_as_number*/
  0, /*tp_as_sequence*/
  0, /*tp_as_mapping*/
  0, /*tp_hash*/
  0, /*tp_call*/
  0, /*tp_str*/
  0, /*tp_getattro*/
  0, /*tp_setattro*/
  0, /*tp_as_buffer*/
  Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/
  PyDoc_STR("Data holder for classifying alignments into SV types"), /*tp_doc*/
  __pyx_tp_traverse_5dysgu_11sv_category_AlignmentItem, /*tp_traverse*/
  __pyx_tp_clear_5dysgu_11sv_category_AlignmentItem, /*tp_clear*/
  0, /*tp_richcompare*/
  0, /*tp_weaklistoffset*/
  0, /*tp_iter*/
  0, /*tp_iternext*/
  __pyx_methods_5dysgu_11sv_category_AlignmentItem, /*tp_methods*/
  0, /*tp_members*/
  __pyx_getsets_5dysgu_11sv_category_AlignmentItem, /*tp_getset*/
  0, /*tp_base*/
  0, /*tp_dict*/
  0, /*tp_descr_get*/
  0, /*tp_descr_set*/
  #if !CYTHON_USE_TYPE_SPECS
  0, /*tp_dictoffset*/
  #endif
  0, /*tp_init*/
  0, /*tp_alloc*/
  __pyx_tp_new_5dysgu_11sv_category_AlignmentItem, /*tp_new*/
  0, /*tp_free*/
  0, /*tp_is_gc*/
  0, /*tp_bases*/
  0, /*tp_mro*/
  0, /*tp_cache*/
  0, /*tp_subclasses*/
  0, /*tp_weaklist*/
  0, /*tp_del*/
  0, /*tp_version_tag*/
  #if PY_VERSION_HEX >= 0x030400a1
  #if CYTHON_USE_TP_FINALIZE
  0, /*tp_finalize*/
  #else
  NULL, /*tp_finalize*/
  #endif
  #endif
  #if PY_VERSION_HEX >= 0x030800b1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07030800)
  0, /*tp_vectorcall*/
  #endif
  #if __PYX_NEED_TP_PRINT_SLOT == 1
  0, /*tp_print*/
  #endif
  #if PY_VERSION_HEX >= 0x030C0000
  0, /*tp_watched*/
  #endif
  #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX >= 0x03090000 && PY_VERSION_HEX < 0x030a0000
  0, /*tp_pypy_flags*/
  #endif
};
#endif

static PyMethodDef __pyx_methods[] = {
  {0, 0, 0, 0}
};
#ifndef CYTHON_SMALL_CODE
#if defined(__clang__)
    #define CYTHON_SMALL_CODE
#elif defined(__GNUC__) && (__GNUC__ > 4 || (__GNUC__ == 4 && __GNUC_MINOR__ >= 3))
    #define CYTHON_SMALL_CODE __attribute__((cold))
#else
    #define CYTHON_SMALL_CODE
#endif
#endif
/* #### Code section: pystring_table ### */

static int __Pyx_CreateStringTabAndInitStrings(void) {
  __Pyx_StringTabEntry __pyx_string_tab[] = {
    {&__pyx_kp_u_3to3, __pyx_k_3to3, sizeof(__pyx_k_3to3), 0, 1, 0, 0},
    {&__pyx_kp_u_3to5, __pyx_k_3to5, sizeof(__pyx_k_3to5), 0, 1, 0, 0},
    {&__pyx_kp_u_5to3, __pyx_k_5to3, sizeof(__pyx_k_5to3), 0, 1, 0, 0},
    {&__pyx_kp_u_5to5, __pyx_k_5to5, sizeof(__pyx_k_5to5), 0, 1, 0, 0},
    {&__pyx_n_s_AlignmentItem, __pyx_k_AlignmentItem, sizeof(__pyx_k_AlignmentItem), 0, 0, 1, 1},
    {&__pyx_n_s_AlignmentItem___reduce_cython, __pyx_k_AlignmentItem___reduce_cython, sizeof(__pyx_k_AlignmentItem___reduce_cython), 0, 0, 1, 1},
    {&__pyx_n_s_AlignmentItem___setstate_cython, __pyx_k_AlignmentItem___setstate_cython, sizeof(__pyx_k_AlignmentItem___setstate_cython), 0, 0, 1, 1},
    {&__pyx_n_u_BND, __pyx_k_BND, sizeof(__pyx_k_BND), 0, 1, 0, 1},
    {&__pyx_n_u_DEL, __pyx_k_DEL, sizeof(__pyx_k_DEL), 0, 1, 0, 1},
    {&__pyx_n_u_DUP, __pyx_k_DUP, sizeof(__pyx_k_DUP), 0, 1, 0, 1},
    {&__pyx_n_u_INS, __pyx_k_INS, sizeof(__pyx_k_INS), 0, 1, 0, 1},
    {&__pyx_n_u_INV, __pyx_k_INV, sizeof(__pyx_k_INV), 0, 1, 0, 1},
    {&__pyx_n_s_ImportError, __pyx_k_ImportError, sizeof(__pyx_k_ImportError), 0, 0, 1, 1},
    {&__pyx_n_u_TRA, __pyx_k_TRA, sizeof(__pyx_k_TRA), 0, 1, 0, 1},
    {&__pyx_n_s_TypeError, __pyx_k_TypeError, sizeof(__pyx_k_TypeError), 0, 0, 1, 1},
    {&__pyx_kp_u__3, __pyx_k__3, sizeof(__pyx_k__3), 0, 1, 0, 0},
    {&__pyx_kp_u__4, __pyx_k__4, sizeof(__pyx_k__4), 0, 1, 0, 0},
    {&__pyx_n_s__9, __pyx_k__9, sizeof(__pyx_k__9), 0, 0, 1, 1},
    {&__pyx_n_s_a_len, __pyx_k_a_len, sizeof(__pyx_k_a_len), 0, 0, 1, 1},
    {&__pyx_n_s_a_node_info, __pyx_k_a_node_info, sizeof(__pyx_k_a_node_info), 0, 0, 1, 1},
    {&__pyx_n_s_a_qend, __pyx_k_a_qend, sizeof(__pyx_k_a_qend), 0, 0, 1, 1},
    {&__pyx_n_s_a_qstart, __pyx_k_a_qstart, sizeof(__pyx_k_a_qstart), 0, 0, 1, 1},
    {&__pyx_n_s_asyncio_coroutines, __pyx_k_asyncio_coroutines, sizeof(__pyx_k_asyncio_coroutines), 0, 0, 1, 1},
    {&__pyx_n_s_b_len, __pyx_k_b_len, sizeof(__pyx_k_b_len), 0, 0, 1, 1},
    {&__pyx_n_s_b_node_info, __pyx_k_b_node_info, sizeof(__pyx_k_b_node_info), 0, 0, 1, 1},
    {&__pyx_n_s_b_qend, __pyx_k_b_qend, sizeof(__pyx_k_b_qend), 0, 0, 1, 1},
    {&__pyx_n_s_b_qstart, __pyx_k_b_qstart, sizeof(__pyx_k_b_qstart), 0, 0, 1, 1},
    {&__pyx_n_s_chrA, __pyx_k_chrA, sizeof(__pyx_k_chrA), 0, 0, 1, 1},
    {&__pyx_n_s_chrB, __pyx_k_chrB, sizeof(__pyx_k_chrB), 0, 0, 1, 1},
    {&__pyx_n_s_cline_in_traceback, __pyx_k_cline_in_traceback, sizeof(__pyx_k_cline_in_traceback), 0, 0, 1, 1},
    {&__pyx_kp_u_disable, __pyx_k_disable, sizeof(__pyx_k_disable), 0, 1, 0, 0},
    {&__pyx_n_s_dysgu_map_set_utils, __pyx_k_dysgu_map_set_utils, sizeof(__pyx_k_dysgu_map_set_utils), 0, 0, 1, 1},
    {&__pyx_n_s_dysgu_sv_category, __pyx_k_dysgu_sv_category, sizeof(__pyx_k_dysgu_sv_category), 0, 0, 1, 1},
    {&__pyx_n_s_echo, __pyx_k_echo, sizeof(__pyx_k_echo), 0, 0, 1, 1},
    {&__pyx_kp_u_enable, __pyx_k_enable, sizeof(__pyx_k_enable), 0, 1, 0, 0},
    {&__pyx_n_s_endA, __pyx_k_endA, sizeof(__pyx_k_endA), 0, 0, 1, 1},
    {&__pyx_n_s_endB, __pyx_k_endB, sizeof(__pyx_k_endB), 0, 0, 1, 1},
    {&__pyx_kp_u_gc, __pyx_k_gc, sizeof(__pyx_k_gc), 0, 1, 0, 0},
    {&__pyx_n_s_getstate, __pyx_k_getstate, sizeof(__pyx_k_getstate), 0, 0, 1, 1},
    {&__pyx_n_s_import, __pyx_k_import, sizeof(__pyx_k_import), 0, 0, 1, 1},
    {&__pyx_n_s_is_coroutine, __pyx_k_is_coroutine, sizeof(__pyx_k_is_coroutine), 0, 0, 1, 1},
    {&__pyx_kp_u_isenabled, __pyx_k_isenabled, sizeof(__pyx_k_isenabled), 0, 1, 0, 0},
    {&__pyx_n_s_left_clipA, __pyx_k_left_clipA, sizeof(__pyx_k_left_clipA), 0, 0, 1, 1},
    {&__pyx_n_s_left_clipB, __pyx_k_left_clipB, sizeof(__pyx_k_left_clipB), 0, 0, 1, 1},
    {&__pyx_n_s_main, __pyx_k_main, sizeof(__pyx_k_main), 0, 0, 1, 1},
    {&__pyx_n_s_name, __pyx_k_name, sizeof(__pyx_k_name), 0, 0, 1, 1},
    {&__pyx_kp_s_no_default___reduce___due_to_non, __pyx_k_no_default___reduce___due_to_non, sizeof(__pyx_k_no_default___reduce___due_to_non), 0, 0, 1, 0},
    {&__pyx_kp_u_numpy__core_multiarray_failed_to, __pyx_k_numpy__core_multiarray_failed_to, sizeof(__pyx_k_numpy__core_multiarray_failed_to), 0, 1, 0, 0},
    {&__pyx_kp_u_numpy__core_umath_failed_to_impo, __pyx_k_numpy__core_umath_failed_to_impo, sizeof(__pyx_k_numpy__core_umath_failed_to_impo), 0, 1, 0, 0},
    {&__pyx_n_s_posA, __pyx_k_posA, sizeof(__pyx_k_posA), 0, 0, 1, 1},
    {&__pyx_n_s_posB, __pyx_k_posB, sizeof(__pyx_k_posB), 0, 0, 1, 1},
    {&__pyx_n_s_priA, __pyx_k_priA, sizeof(__pyx_k_priA), 0, 0, 1, 1},
    {&__pyx_n_s_priB, __pyx_k_priB, sizeof(__pyx_k_priB), 0, 0, 1, 1},
    {&__pyx_n_s_pyx_state, __pyx_k_pyx_state, sizeof(__pyx_k_pyx_state), 0, 0, 1, 1},
    {&__pyx_n_s_pyx_vtable, __pyx_k_pyx_vtable, sizeof(__pyx_k_pyx_vtable), 0, 0, 1, 1},
    {&__pyx_n_s_rA, __pyx_k_rA, sizeof(__pyx_k_rA), 0, 0, 1, 1},
    {&__pyx_n_s_rB, __pyx_k_rB, sizeof(__pyx_k_rB), 0, 0, 1, 1},
    {&__pyx_n_s_read_a, __pyx_k_read_a, sizeof(__pyx_k_read_a), 0, 0, 1, 1},
    {&__pyx_n_s_read_b, __pyx_k_read_b, sizeof(__pyx_k_read_b), 0, 0, 1, 1},
    {&__pyx_n_s_read_overlaps_mate, __pyx_k_read_overlaps_mate, sizeof(__pyx_k_read_overlaps_mate), 0, 0, 1, 1},
    {&__pyx_n_s_reduce, __pyx_k_reduce, sizeof(__pyx_k_reduce), 0, 0, 1, 1},
    {&__pyx_n_s_reduce_cython, __pyx_k_reduce_cython, sizeof(__pyx_k_reduce_cython), 0, 0, 1, 1},
    {&__pyx_n_s_reduce_ex, __pyx_k_reduce_ex, sizeof(__pyx_k_reduce_ex), 0, 0, 1, 1},
    {&__pyx_n_s_right_clipA, __pyx_k_right_clipA, sizeof(__pyx_k_right_clipA), 0, 0, 1, 1},
    {&__pyx_n_s_right_clipB, __pyx_k_right_clipB, sizeof(__pyx_k_right_clipB), 0, 0, 1, 1},
    {&__pyx_n_s_self, __pyx_k_self, sizeof(__pyx_k_self), 0, 0, 1, 1},
    {&__pyx_n_s_setstate, __pyx_k_setstate, sizeof(__pyx_k_setstate), 0, 0, 1, 1},
    {&__pyx_n_s_setstate_cython, __pyx_k_setstate_cython, sizeof(__pyx_k_setstate_cython), 0, 0, 1, 1},
    {&__pyx_n_s_strandA, __pyx_k_strandA, sizeof(__pyx_k_strandA), 0, 0, 1, 1},
    {&__pyx_n_s_strandB, __pyx_k_strandB, sizeof(__pyx_k_strandB), 0, 0, 1, 1},
    {&__pyx_kp_s_stringsource, __pyx_k_stringsource, sizeof(__pyx_k_stringsource), 0, 0, 1, 0},
    {&__pyx_n_s_test, __pyx_k_test, sizeof(__pyx_k_test), 0, 0, 1, 1},
    {&__pyx_n_u_to, __pyx_k_to, sizeof(__pyx_k_to), 0, 1, 0, 1},
    {0, 0, 0, 0, 0, 0, 0}
  };
  return __Pyx_InitStrings(__pyx_string_tab);
}
/* #### Code section: cached_builtins ### */
static CYTHON_SMALL_CODE int __Pyx_InitCachedBuiltins(void) {
  __pyx_builtin_TypeError = __Pyx_GetBuiltinName(__pyx_n_s_TypeError); if (!__pyx_builtin_TypeError) __PYX_ERR(0, 2, __pyx_L1_error)
  __pyx_builtin_ImportError = __Pyx_GetBuiltinName(__pyx_n_s_ImportError); if (!__pyx_builtin_ImportError) __PYX_ERR(1, 1026, __pyx_L1_error)
  return 0;
  __pyx_L1_error:;
  return -1;
}
/* #### Code section: cached_constants ### */

static CYTHON_SMALL_CODE int __Pyx_InitCachedConstants(void) {
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__Pyx_InitCachedConstants", 0);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1026
 *         __pyx_import_array()
 *     except Exception:
 *         raise ImportError("numpy._core.multiarray failed to import")             # <<<<<<<<<<<<<<
 * 
 * cdef inline int import_umath() except -1:
 */
  __pyx_tuple_ = PyTuple_Pack(1, __pyx_kp_u_numpy__core_multiarray_failed_to); if (unlikely(!__pyx_tuple_)) __PYX_ERR(1, 1026, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_tuple_);
  __Pyx_GIVEREF(__pyx_tuple_);

  /* "../_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/python3.10/site-packages/numpy/__init__.cython-30.pxd":1032
 *         _import_umath()
 *     except Exception:
 *         raise ImportError("numpy._core.umath failed to import")             # <<<<<<<<<<<<<<
 * 
 * cdef inline int import_ufunc() except -1:
 */
  __pyx_tuple__2 = PyTuple_Pack(1, __pyx_kp_u_numpy__core_umath_failed_to_impo); if (unlikely(!__pyx_tuple__2)) __PYX_ERR(1, 1032, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_tuple__2);
  __Pyx_GIVEREF(__pyx_tuple__2);

  /* "(tree fragment)":1
 * def __reduce_cython__(self):             # <<<<<<<<<<<<<<
 *     raise TypeError, "no default __reduce__ due to non-trivial __cinit__"
 * def __setstate_cython__(self, __pyx_state):
 */
  __pyx_tuple__5 = PyTuple_Pack(1, __pyx_n_s_self); if (unlikely(!__pyx_tuple__5)) __PYX_ERR(0, 1, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_tuple__5);
  __Pyx_GIVEREF(__pyx_tuple__5);
  __pyx_codeobj__6 = (PyObject*)__Pyx_PyCode_New(1, 0, 0, 1, 0, CO_OPTIMIZED|CO_NEWLOCALS, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__5, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_stringsource, __pyx_n_s_reduce_cython, 1, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__6)) __PYX_ERR(0, 1, __pyx_L1_error)

  /* "(tree fragment)":3
 * def __reduce_cython__(self):
 *     raise TypeError, "no default __reduce__ due to non-trivial __cinit__"
 * def __setstate_cython__(self, __pyx_state):             # <<<<<<<<<<<<<<
 *     raise TypeError, "no default __reduce__ due to non-trivial __cinit__"
 */
  __pyx_tuple__7 = PyTuple_Pack(2, __pyx_n_s_self, __pyx_n_s_pyx_state); if (unlikely(!__pyx_tuple__7)) __PYX_ERR(0, 3, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_tuple__7);
  __Pyx_GIVEREF(__pyx_tuple__7);
  __pyx_codeobj__8 = (PyObject*)__Pyx_PyCode_New(2, 0, 0, 2, 0, CO_OPTIMIZED|CO_NEWLOCALS, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__7, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_stringsource, __pyx_n_s_setstate_cython, 3, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__8)) __PYX_ERR(0, 3, __pyx_L1_error)
  __Pyx_RefNannyFinishContext();
  return 0;
  __pyx_L1_error:;
  __Pyx_RefNannyFinishContext();
  return -1;
}
/* #### Code section: init_constants ### */

static CYTHON_SMALL_CODE int __Pyx_InitConstants(void) {
  if (__Pyx_CreateStringTabAndInitStrings() < 0) __PYX_ERR(2, 1, __pyx_L1_error);
  __pyx_int_0 = PyInt_FromLong(0); if (unlikely(!__pyx_int_0)) __PYX_ERR(2, 1, __pyx_L1_error)
  return 0;
  __pyx_L1_error:;
  return -1;
}
/* #### Code section: init_globals ### */

static CYTHON_SMALL_CODE int __Pyx_InitGlobals(void) {
  return 0;
}
/* #### Code section: init_module ### */

static CYTHON_SMALL_CODE int __Pyx_modinit_global_init_code(void); /*proto*/
static CYTHON_SMALL_CODE int __Pyx_modinit_variable_export_code(void); /*proto*/
static CYTHON_SMALL_CODE int __Pyx_modinit_function_export_code(void); /*proto*/
static CYTHON_SMALL_CODE int __Pyx_modinit_type_init_code(void); /*proto*/
static CYTHON_SMALL_CODE int __Pyx_modinit_type_import_code(void); /*proto*/
static CYTHON_SMALL_CODE int __Pyx_modinit_variable_import_code(void); /*proto*/
static CYTHON_SMALL_CODE int __Pyx_modinit_function_import_code(void); /*proto*/

static int __Pyx_modinit_global_init_code(void) {
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__Pyx_modinit_global_init_code", 0);
  /*--- Global init code ---*/
  __Pyx_RefNannyFinishContext();
  return 0;
}

static int __Pyx_modinit_variable_export_code(void) {
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__Pyx_modinit_variable_export_code", 0);
  /*--- Variable export code ---*/
  __Pyx_RefNannyFinishContext();
  return 0;
}

static int __Pyx_modinit_function_export_code(void) {
  __Pyx_RefNannyDeclarations
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__Pyx_modinit_function_export_code", 0);
  /*--- Function export code ---*/
  if (__Pyx_ExportFunction("classify_d", (void (*)(void))__pyx_f_5dysgu_11sv_category_classify_d, "void (struct __pyx_obj_5dysgu_11sv_category_AlignmentItem *)") < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  __Pyx_RefNannyFinishContext();
  return 0;
  __pyx_L1_error:;
  __Pyx_RefNannyFinishContext();
  return -1;
}

static int __Pyx_modinit_type_init_code(void) {
  __Pyx_RefNannyDeclarations
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__Pyx_modinit_type_init_code", 0);
  /*--- Type init code ---*/
  #if CYTHON_USE_TYPE_SPECS
  __pyx_ptype_5dysgu_11sv_category_AlignmentItem = (PyTypeObject *) __Pyx_PyType_FromModuleAndSpec(__pyx_m, &__pyx_type_5dysgu_11sv_category_AlignmentItem_spec, NULL); if (unlikely(!__pyx_ptype_5dysgu_11sv_category_AlignmentItem)) __PYX_ERR(2, 7, __pyx_L1_error)
  if (__Pyx_fix_up_extension_type_from_spec(&__pyx_type_5dysgu_11sv_category_AlignmentItem_spec, __pyx_ptype_5dysgu_11sv_category_AlignmentItem) < 0) __PYX_ERR(2, 7, __pyx_L1_error)
  #else
  __pyx_ptype_5dysgu_11sv_category_AlignmentItem = &__pyx_type_5dysgu_11sv_category_AlignmentItem;
  #endif
  #if !CYTHON_COMPILING_IN_LIMITED_API
  #endif
  #if !CYTHON_USE_TYPE_SPECS
  if (__Pyx_PyType_Ready(__pyx_ptype_5dysgu_11sv_category_AlignmentItem) < 0) __PYX_ERR(2, 7, __pyx_L1_error)
  #endif
  #if PY_MAJOR_VERSION < 3
  __pyx_ptype_5dysgu_11sv_category_AlignmentItem->tp_print = 0;
  #endif
  #if !CYTHON_COMPILING_IN_LIMITED_API
  if ((CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP) && likely(!__pyx_ptype_5dysgu_11sv_category_AlignmentItem->tp_dictoffset && __pyx_ptype_5dysgu_11sv_category_AlignmentItem->tp_getattro == PyObject_GenericGetAttr)) {
    __pyx_ptype_5dysgu_11sv_category_AlignmentItem->tp_getattro = __Pyx_PyObject_GenericGetAttr;
  }
  #endif
  if (PyObject_SetAttr(__pyx_m, __pyx_n_s_AlignmentItem, (PyObject *) __pyx_ptype_5dysgu_11sv_category_AlignmentItem) < 0) __PYX_ERR(2, 7, __pyx_L1_error)
  #if !CYTHON_COMPILING_IN_LIMITED_API
  if (__Pyx_setup_reduce((PyObject *) __pyx_ptype_5dysgu_11sv_category_AlignmentItem) < 0) __PYX_ERR(2, 7, __pyx_L1_error)
  #endif
  __Pyx_RefNannyFinishContext();
  return 0;
  __pyx_L1_error:;
  __Pyx_RefNannyFinishContext();
  return -1;
}

static int __Pyx_modinit_type_import_code(void) {
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__Pyx_modinit_type_import_code", 0);
  /*--- Type import code ---*/
  __pyx_t_1 = PyImport_ImportModule(__Pyx_BUILTIN_MODULE_NAME); if (unlikely(!__pyx_t_1)) __PYX_ERR(4, 9, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_ptype_7cpython_4type_type = __Pyx_ImportType_3_0_10(__pyx_t_1, __Pyx_BUILTIN_MODULE_NAME, "type", 
  #if defined(PYPY_VERSION_NUM) && PYPY_VERSION_NUM < 0x050B0000
  sizeof(PyTypeObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyTypeObject),
  #elif CYTHON_COMPILING_IN_LIMITED_API
  sizeof(PyTypeObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyTypeObject),
  #else
  sizeof(PyHeapTypeObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyHeapTypeObject),
  #endif
  __Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_7cpython_4type_type) __PYX_ERR(4, 9, __pyx_L1_error)
  __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
  __pyx_t_1 = PyImport_ImportModule("numpy"); if (unlikely(!__pyx_t_1)) __PYX_ERR(1, 271, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_ptype_5numpy_dtype = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "dtype", sizeof(PyArray_Descr), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyArray_Descr),__Pyx_ImportType_CheckSize_Ignore_3_0_10); if (!__pyx_ptype_5numpy_dtype) __PYX_ERR(1, 271, __pyx_L1_error)
  __pyx_ptype_5numpy_flatiter = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "flatiter", sizeof(PyArrayIterObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyArrayIterObject),__Pyx_ImportType_CheckSize_Ignore_3_0_10); if (!__pyx_ptype_5numpy_flatiter) __PYX_ERR(1, 316, __pyx_L1_error)
  __pyx_ptype_5numpy_broadcast = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "broadcast", sizeof(PyArrayMultiIterObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyArrayMultiIterObject),__Pyx_ImportType_CheckSize_Ignore_3_0_10); if (!__pyx_ptype_5numpy_broadcast) __PYX_ERR(1, 320, __pyx_L1_error)
  __pyx_ptype_5numpy_ndarray = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "ndarray", sizeof(PyArrayObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyArrayObject),__Pyx_ImportType_CheckSize_Ignore_3_0_10); if (!__pyx_ptype_5numpy_ndarray) __PYX_ERR(1, 359, __pyx_L1_error)
  __pyx_ptype_5numpy_generic = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "generic", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_generic) __PYX_ERR(1, 848, __pyx_L1_error)
  __pyx_ptype_5numpy_number = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "number", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_number) __PYX_ERR(1, 850, __pyx_L1_error)
  __pyx_ptype_5numpy_integer = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "integer", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_integer) __PYX_ERR(1, 852, __pyx_L1_error)
  __pyx_ptype_5numpy_signedinteger = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "signedinteger", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_signedinteger) __PYX_ERR(1, 854, __pyx_L1_error)
  __pyx_ptype_5numpy_unsignedinteger = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "unsignedinteger", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_unsignedinteger) __PYX_ERR(1, 856, __pyx_L1_error)
  __pyx_ptype_5numpy_inexact = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "inexact", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_inexact) __PYX_ERR(1, 858, __pyx_L1_error)
  __pyx_ptype_5numpy_floating = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "floating", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_floating) __PYX_ERR(1, 860, __pyx_L1_error)
  __pyx_ptype_5numpy_complexfloating = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "complexfloating", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_complexfloating) __PYX_ERR(1, 862, __pyx_L1_error)
  __pyx_ptype_5numpy_flexible = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "flexible", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_flexible) __PYX_ERR(1, 864, __pyx_L1_error)
  __pyx_ptype_5numpy_character = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "character", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_character) __PYX_ERR(1, 866, __pyx_L1_error)
  __pyx_ptype_5numpy_ufunc = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "ufunc", sizeof(PyUFuncObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyUFuncObject),__Pyx_ImportType_CheckSize_Ignore_3_0_10); if (!__pyx_ptype_5numpy_ufunc) __PYX_ERR(1, 930, __pyx_L1_error)
  __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
  __pyx_t_1 = PyImport_ImportModule("dysgu.map_set_utils"); if (unlikely(!__pyx_t_1)) __PYX_ERR(5, 99, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  __pyx_ptype_5dysgu_13map_set_utils_Py_BasicIntervalTree = __Pyx_ImportType_3_0_10(__pyx_t_1, "dysgu.map_set_utils", "Py_BasicIntervalTree", sizeof(struct __pyx_obj_5dysgu_13map_set_utils_Py_BasicIntervalTree), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(struct __pyx_obj_5dysgu_13map_set_utils_Py_BasicIntervalTree),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5dysgu_13map_set_utils_Py_BasicIntervalTree) __PYX_ERR(5, 99, __pyx_L1_error)
  __pyx_vtabptr_5dysgu_13map_set_utils_Py_BasicIntervalTree = (struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_BasicIntervalTree*)__Pyx_GetVtable(__pyx_ptype_5dysgu_13map_set_utils_Py_BasicIntervalTree); if (unlikely(!__pyx_vtabptr_5dysgu_13map_set_utils_Py_BasicIntervalTree)) __PYX_ERR(5, 99, __pyx_L1_error)
  __pyx_ptype_5dysgu_13map_set_utils_Py_DiGraph = __Pyx_ImportType_3_0_10(__pyx_t_1, "dysgu.map_set_utils", "Py_DiGraph", sizeof(struct __pyx_obj_5dysgu_13map_set_utils_Py_DiGraph), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(struct __pyx_obj_5dysgu_13map_set_utils_Py_DiGraph),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5dysgu_13map_set_utils_Py_DiGraph) __PYX_ERR(5, 125, __pyx_L1_error)
  __pyx_vtabptr_5dysgu_13map_set_utils_Py_DiGraph = (struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_DiGraph*)__Pyx_GetVtable(__pyx_ptype_5dysgu_13map_set_utils_Py_DiGraph); if (unlikely(!__pyx_vtabptr_5dysgu_13map_set_utils_Py_DiGraph)) __PYX_ERR(5, 125, __pyx_L1_error)
  __pyx_ptype_5dysgu_13map_set_utils_Py_SimpleGraph = __Pyx_ImportType_3_0_10(__pyx_t_1, "dysgu.map_set_utils", "Py_SimpleGraph", sizeof(struct __pyx_obj_5dysgu_13map_set_utils_Py_SimpleGraph), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(struct __pyx_obj_5dysgu_13map_set_utils_Py_SimpleGraph),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5dysgu_13map_set_utils_Py_SimpleGraph) __PYX_ERR(5, 170, __pyx_L1_error)
  __pyx_vtabptr_5dysgu_13map_set_utils_Py_SimpleGraph = (struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_SimpleGraph*)__Pyx_GetVtable(__pyx_ptype_5dysgu_13map_set_utils_Py_SimpleGraph); if (unlikely(!__pyx_vtabptr_5dysgu_13map_set_utils_Py_SimpleGraph)) __PYX_ERR(5, 170, __pyx_L1_error)
  __pyx_ptype_5dysgu_13map_set_utils_Py_Int2IntMap = __Pyx_ImportType_3_0_10(__pyx_t_1, "dysgu.map_set_utils", "Py_Int2IntMap", sizeof(struct __pyx_obj_5dysgu_13map_set_utils_Py_Int2IntMap), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(struct __pyx_obj_5dysgu_13map_set_utils_Py_Int2IntMap),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5dysgu_13map_set_utils_Py_Int2IntMap) __PYX_ERR(5, 196, __pyx_L1_error)
  __pyx_vtabptr_5dysgu_13map_set_utils_Py_Int2IntMap = (struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_Int2IntMap*)__Pyx_GetVtable(__pyx_ptype_5dysgu_13map_set_utils_Py_Int2IntMap); if (unlikely(!__pyx_vtabptr_5dysgu_13map_set_utils_Py_Int2IntMap)) __PYX_ERR(5, 196, __pyx_L1_error)
  __pyx_ptype_5dysgu_13map_set_utils_Py_IntSet = __Pyx_ImportType_3_0_10(__pyx_t_1, "dysgu.map_set_utils", "Py_IntSet", sizeof(struct __pyx_obj_5dysgu_13map_set_utils_Py_IntSet), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(struct __pyx_obj_5dysgu_13map_set_utils_Py_IntSet),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5dysgu_13map_set_utils_Py_IntSet) __PYX_ERR(5, 218, __pyx_L1_error)
  __pyx_vtabptr_5dysgu_13map_set_utils_Py_IntSet = (struct __pyx_vtabstruct_5dysgu_13map_set_utils_Py_IntSet*)__Pyx_GetVtable(__pyx_ptype_5dysgu_13map_set_utils_Py_IntSet); if (unlikely(!__pyx_vtabptr_5dysgu_13map_set_utils_Py_IntSet)) __PYX_ERR(5, 218, __pyx_L1_error)
  __pyx_ptype_5dysgu_13map_set_utils_EventResult = __Pyx_ImportType_3_0_10(__pyx_t_1, "dysgu.map_set_utils", "EventResult", sizeof(struct __pyx_obj_5dysgu_13map_set_utils_EventResult), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(struct __pyx_obj_5dysgu_13map_set_utils_EventResult),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5dysgu_13map_set_utils_EventResult) __PYX_ERR(5, 311, __pyx_L1_error)
  __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
  __Pyx_RefNannyFinishContext();
  return 0;
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_RefNannyFinishContext();
  return -1;
}

static int __Pyx_modinit_variable_import_code(void) {
  __Pyx_RefNannyDeclarations
  __Pyx_RefNannySetupContext("__Pyx_modinit_variable_import_code", 0);
  /*--- Variable import code ---*/
  __Pyx_RefNannyFinishContext();
  return 0;
}

static int __Pyx_modinit_function_import_code(void) {
  __Pyx_RefNannyDeclarations
  PyObject *__pyx_t_1 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannySetupContext("__Pyx_modinit_function_import_code", 0);
  /*--- Function import code ---*/
  __pyx_t_1 = PyImport_ImportModule("dysgu.map_set_utils"); if (!__pyx_t_1) __PYX_ERR(2, 1, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_1);
  if (__Pyx_ImportFunction_3_0_10(__pyx_t_1, "is_overlapping", (void (**)(void))&__pyx_f_5dysgu_13map_set_utils_is_overlapping, "int (int, int, int, int, int __pyx_skip_dispatch)") < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
  __Pyx_RefNannyFinishContext();
  return 0;
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_1);
  __Pyx_RefNannyFinishContext();
  return -1;
}


#if PY_MAJOR_VERSION >= 3
#if CYTHON_PEP489_MULTI_PHASE_INIT
static PyObject* __pyx_pymod_create(PyObject *spec, PyModuleDef *def); /*proto*/
static int __pyx_pymod_exec_sv_category(PyObject* module); /*proto*/
static PyModuleDef_Slot __pyx_moduledef_slots[] = {
  {Py_mod_create, (void*)__pyx_pymod_create},
  {Py_mod_exec, (void*)__pyx_pymod_exec_sv_category},
  {0, NULL}
};
#endif

#ifdef __cplusplus
namespace {
  struct PyModuleDef __pyx_moduledef =
  #else
  static struct PyModuleDef __pyx_moduledef =
  #endif
  {
      PyModuleDef_HEAD_INIT,
      "sv_category",
      0, /* m_doc */
    #if CYTHON_PEP489_MULTI_PHASE_INIT
      0, /* m_size */
    #elif CYTHON_USE_MODULE_STATE
      sizeof(__pyx_mstate), /* m_size */
    #else
      -1, /* m_size */
    #endif
      __pyx_methods /* m_methods */,
    #if CYTHON_PEP489_MULTI_PHASE_INIT
      __pyx_moduledef_slots, /* m_slots */
    #else
      NULL, /* m_reload */
    #endif
    #if CYTHON_USE_MODULE_STATE
      __pyx_m_traverse, /* m_traverse */
      __pyx_m_clear, /* m_clear */
      NULL /* m_free */
    #else
      NULL, /* m_traverse */
      NULL, /* m_clear */
      NULL /* m_free */
    #endif
  };
  #ifdef __cplusplus
} /* anonymous namespace */
#endif
#endif

#ifndef CYTHON_NO_PYINIT_EXPORT
#define __Pyx_PyMODINIT_FUNC PyMODINIT_FUNC
#elif PY_MAJOR_VERSION < 3
#ifdef __cplusplus
#define __Pyx_PyMODINIT_FUNC extern "C" void
#else
#define __Pyx_PyMODINIT_FUNC void
#endif
#else
#ifdef __cplusplus
#define __Pyx_PyMODINIT_FUNC extern "C" PyObject *
#else
#define __Pyx_PyMODINIT_FUNC PyObject *
#endif
#endif


#if PY_MAJOR_VERSION < 3
__Pyx_PyMODINIT_FUNC initsv_category(void) CYTHON_SMALL_CODE; /*proto*/
__Pyx_PyMODINIT_FUNC initsv_category(void)
#else
__Pyx_PyMODINIT_FUNC PyInit_sv_category(void) CYTHON_SMALL_CODE; /*proto*/
__Pyx_PyMODINIT_FUNC PyInit_sv_category(void)
#if CYTHON_PEP489_MULTI_PHASE_INIT
{
  return PyModuleDef_Init(&__pyx_moduledef);
}
static CYTHON_SMALL_CODE int __Pyx_check_single_interpreter(void) {
    #if PY_VERSION_HEX >= 0x030700A1
    static PY_INT64_T main_interpreter_id = -1;
    PY_INT64_T current_id = PyInterpreterState_GetID(PyThreadState_Get()->interp);
    if (main_interpreter_id == -1) {
        main_interpreter_id = current_id;
        return (unlikely(current_id == -1)) ? -1 : 0;
    } else if (unlikely(main_interpreter_id != current_id))
    #else
    static PyInterpreterState *main_interpreter = NULL;
    PyInterpreterState *current_interpreter = PyThreadState_Get()->interp;
    if (!main_interpreter) {
        main_interpreter = current_interpreter;
    } else if (unlikely(main_interpreter != current_interpreter))
    #endif
    {
        PyErr_SetString(
            PyExc_ImportError,
            "Interpreter change detected - this module can only be loaded into one interpreter per process.");
        return -1;
    }
    return 0;
}
#if CYTHON_COMPILING_IN_LIMITED_API
static CYTHON_SMALL_CODE int __Pyx_copy_spec_to_module(PyObject *spec, PyObject *module, const char* from_name, const char* to_name, int allow_none)
#else
static CYTHON_SMALL_CODE int __Pyx_copy_spec_to_module(PyObject *spec, PyObject *moddict, const char* from_name, const char* to_name, int allow_none)
#endif
{
    PyObject *value = PyObject_GetAttrString(spec, from_name);
    int result = 0;
    if (likely(value)) {
        if (allow_none || value != Py_None) {
#if CYTHON_COMPILING_IN_LIMITED_API
            result = PyModule_AddObject(module, to_name, value);
#else
            result = PyDict_SetItemString(moddict, to_name, value);
#endif
        }
        Py_DECREF(value);
    } else if (PyErr_ExceptionMatches(PyExc_AttributeError)) {
        PyErr_Clear();
    } else {
        result = -1;
    }
    return result;
}
static CYTHON_SMALL_CODE PyObject* __pyx_pymod_create(PyObject *spec, PyModuleDef *def) {
    PyObject *module = NULL, *moddict, *modname;
    CYTHON_UNUSED_VAR(def);
    if (__Pyx_check_single_interpreter())
        return NULL;
    if (__pyx_m)
        return __Pyx_NewRef(__pyx_m);
    modname = PyObject_GetAttrString(spec, "name");
    if (unlikely(!modname)) goto bad;
    module = PyModule_NewObject(modname);
    Py_DECREF(modname);
    if (unlikely(!module)) goto bad;
#if CYTHON_COMPILING_IN_LIMITED_API
    moddict = module;
#else
    moddict = PyModule_GetDict(module);
    if (unlikely(!moddict)) goto bad;
#endif
    if (unlikely(__Pyx_copy_spec_to_module(spec, moddict, "loader", "__loader__", 1) < 0)) goto bad;
    if (unlikely(__Pyx_copy_spec_to_module(spec, moddict, "origin", "__file__", 1) < 0)) goto bad;
    if (unlikely(__Pyx_copy_spec_to_module(spec, moddict, "parent", "__package__", 1) < 0)) goto bad;
    if (unlikely(__Pyx_copy_spec_to_module(spec, moddict, "submodule_search_locations", "__path__", 0) < 0)) goto bad;
    return module;
bad:
    Py_XDECREF(module);
    return NULL;
}


static CYTHON_SMALL_CODE int __pyx_pymod_exec_sv_category(PyObject *__pyx_pyinit_module)
#endif
#endif
{
  int stringtab_initialized = 0;
  #if CYTHON_USE_MODULE_STATE
  int pystate_addmodule_run = 0;
  #endif
  PyObject *__pyx_t_1 = NULL;
  PyObject *__pyx_t_2 = NULL;
  PyObject *__pyx_t_3 = NULL;
  int __pyx_lineno = 0;
  const char *__pyx_filename = NULL;
  int __pyx_clineno = 0;
  __Pyx_RefNannyDeclarations
  #if CYTHON_PEP489_MULTI_PHASE_INIT
  if (__pyx_m) {
    if (__pyx_m == __pyx_pyinit_module) return 0;
    PyErr_SetString(PyExc_RuntimeError, "Module 'sv_category' has already been imported. Re-initialisation is not supported.");
    return -1;
  }
  #elif PY_MAJOR_VERSION >= 3
  if (__pyx_m) return __Pyx_NewRef(__pyx_m);
  #endif
  /*--- Module creation code ---*/
  #if CYTHON_PEP489_MULTI_PHASE_INIT
  __pyx_m = __pyx_pyinit_module;
  Py_INCREF(__pyx_m);
  #else
  #if PY_MAJOR_VERSION < 3
  __pyx_m = Py_InitModule4("sv_category", __pyx_methods, 0, 0, PYTHON_API_VERSION); Py_XINCREF(__pyx_m);
  if (unlikely(!__pyx_m)) __PYX_ERR(2, 1, __pyx_L1_error)
  #elif CYTHON_USE_MODULE_STATE
  __pyx_t_1 = PyModule_Create(&__pyx_moduledef); if (unlikely(!__pyx_t_1)) __PYX_ERR(2, 1, __pyx_L1_error)
  {
    int add_module_result = PyState_AddModule(__pyx_t_1, &__pyx_moduledef);
    __pyx_t_1 = 0; /* transfer ownership from __pyx_t_1 to "sv_category" pseudovariable */
    if (unlikely((add_module_result < 0))) __PYX_ERR(2, 1, __pyx_L1_error)
    pystate_addmodule_run = 1;
  }
  #else
  __pyx_m = PyModule_Create(&__pyx_moduledef);
  if (unlikely(!__pyx_m)) __PYX_ERR(2, 1, __pyx_L1_error)
  #endif
  #endif
  CYTHON_UNUSED_VAR(__pyx_t_1);
  __pyx_d = PyModule_GetDict(__pyx_m); if (unlikely(!__pyx_d)) __PYX_ERR(2, 1, __pyx_L1_error)
  Py_INCREF(__pyx_d);
  __pyx_b = __Pyx_PyImport_AddModuleRef(__Pyx_BUILTIN_MODULE_NAME); if (unlikely(!__pyx_b)) __PYX_ERR(2, 1, __pyx_L1_error)
  __pyx_cython_runtime = __Pyx_PyImport_AddModuleRef((const char *) "cython_runtime"); if (unlikely(!__pyx_cython_runtime)) __PYX_ERR(2, 1, __pyx_L1_error)
  if (PyObject_SetAttrString(__pyx_m, "__builtins__", __pyx_b) < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  #if CYTHON_REFNANNY
__Pyx_RefNanny = __Pyx_RefNannyImportAPI("refnanny");
if (!__Pyx_RefNanny) {
  PyErr_Clear();
  __Pyx_RefNanny = __Pyx_RefNannyImportAPI("Cython.Runtime.refnanny");
  if (!__Pyx_RefNanny)
      Py_FatalError("failed to import 'refnanny' module");
}
#endif
  __Pyx_RefNannySetupContext("__Pyx_PyMODINIT_FUNC PyInit_sv_category(void)", 0);
  if (__Pyx_check_binary_version(__PYX_LIMITED_VERSION_HEX, __Pyx_get_runtime_version(), CYTHON_COMPILING_IN_LIMITED_API) < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  #ifdef __Pxy_PyFrame_Initialize_Offsets
  __Pxy_PyFrame_Initialize_Offsets();
  #endif
  __pyx_empty_tuple = PyTuple_New(0); if (unlikely(!__pyx_empty_tuple)) __PYX_ERR(2, 1, __pyx_L1_error)
  __pyx_empty_bytes = PyBytes_FromStringAndSize("", 0); if (unlikely(!__pyx_empty_bytes)) __PYX_ERR(2, 1, __pyx_L1_error)
  __pyx_empty_unicode = PyUnicode_FromStringAndSize("", 0); if (unlikely(!__pyx_empty_unicode)) __PYX_ERR(2, 1, __pyx_L1_error)
  #ifdef __Pyx_CyFunction_USED
  if (__pyx_CyFunction_init(__pyx_m) < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  #endif
  #ifdef __Pyx_FusedFunction_USED
  if (__pyx_FusedFunction_init(__pyx_m) < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  #endif
  #ifdef __Pyx_Coroutine_USED
  if (__pyx_Coroutine_init(__pyx_m) < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  #endif
  #ifdef __Pyx_Generator_USED
  if (__pyx_Generator_init(__pyx_m) < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  #endif
  #ifdef __Pyx_AsyncGen_USED
  if (__pyx_AsyncGen_init(__pyx_m) < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  #endif
  #ifdef __Pyx_StopAsyncIteration_USED
  if (__pyx_StopAsyncIteration_init(__pyx_m) < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  #endif
  /*--- Library function declarations ---*/
  /*--- Threads initialization code ---*/
  #if defined(WITH_THREAD) && PY_VERSION_HEX < 0x030700F0 && defined(__PYX_FORCE_INIT_THREADS) && __PYX_FORCE_INIT_THREADS
  PyEval_InitThreads();
  #endif
  /*--- Initialize various global constants etc. ---*/
  if (__Pyx_InitConstants() < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  stringtab_initialized = 1;
  if (__Pyx_InitGlobals() < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  #if PY_MAJOR_VERSION < 3 && (__PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT)
  if (__Pyx_init_sys_getdefaultencoding_params() < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  #endif
  if (__pyx_module_is_main_dysgu__sv_category) {
    if (PyObject_SetAttr(__pyx_m, __pyx_n_s_name, __pyx_n_s_main) < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  }
  #if PY_MAJOR_VERSION >= 3
  {
    PyObject *modules = PyImport_GetModuleDict(); if (unlikely(!modules)) __PYX_ERR(2, 1, __pyx_L1_error)
    if (!PyDict_GetItemString(modules, "dysgu.sv_category")) {
      if (unlikely((PyDict_SetItemString(modules, "dysgu.sv_category", __pyx_m) < 0))) __PYX_ERR(2, 1, __pyx_L1_error)
    }
  }
  #endif
  /*--- Builtin init code ---*/
  if (__Pyx_InitCachedBuiltins() < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  /*--- Constants init code ---*/
  if (__Pyx_InitCachedConstants() < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  /*--- Global type/function init code ---*/
  (void)__Pyx_modinit_global_init_code();
  (void)__Pyx_modinit_variable_export_code();
  if (unlikely((__Pyx_modinit_function_export_code() < 0))) __PYX_ERR(2, 1, __pyx_L1_error)
  if (unlikely((__Pyx_modinit_type_init_code() < 0))) __PYX_ERR(2, 1, __pyx_L1_error)
  if (unlikely((__Pyx_modinit_type_import_code() < 0))) __PYX_ERR(2, 1, __pyx_L1_error)
  (void)__Pyx_modinit_variable_import_code();
  if (unlikely((__Pyx_modinit_function_import_code() < 0))) __PYX_ERR(2, 1, __pyx_L1_error)
  /*--- Execution code ---*/
  #if defined(__Pyx_Generator_USED) || defined(__Pyx_Coroutine_USED)
  if (__Pyx_patch_abc() < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  #endif

  /* "dysgu/sv_category.pyx":4
 * 
 * from dysgu.map_set_utils cimport is_overlapping
 * from dysgu.map_set_utils import echo             # <<<<<<<<<<<<<<
 * 
 * 
 */
  __pyx_t_2 = PyList_New(1); if (unlikely(!__pyx_t_2)) __PYX_ERR(2, 4, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_2);
  __Pyx_INCREF(__pyx_n_s_echo);
  __Pyx_GIVEREF(__pyx_n_s_echo);
  if (__Pyx_PyList_SET_ITEM(__pyx_t_2, 0, __pyx_n_s_echo)) __PYX_ERR(2, 4, __pyx_L1_error);
  __pyx_t_3 = __Pyx_Import(__pyx_n_s_dysgu_map_set_utils, __pyx_t_2, 0); if (unlikely(!__pyx_t_3)) __PYX_ERR(2, 4, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_3);
  __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
  __pyx_t_2 = __Pyx_ImportFrom(__pyx_t_3, __pyx_n_s_echo); if (unlikely(!__pyx_t_2)) __PYX_ERR(2, 4, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_2);
  if (PyDict_SetItem(__pyx_d, __pyx_n_s_echo, __pyx_t_2) < 0) __PYX_ERR(2, 4, __pyx_L1_error)
  __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
  __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;

  /* "(tree fragment)":1
 * def __reduce_cython__(self):             # <<<<<<<<<<<<<<
 *     raise TypeError, "no default __reduce__ due to non-trivial __cinit__"
 * def __setstate_cython__(self, __pyx_state):
 */
  __pyx_t_3 = __Pyx_CyFunction_New(&__pyx_mdef_5dysgu_11sv_category_13AlignmentItem_3__reduce_cython__, __Pyx_CYFUNCTION_CCLASS, __pyx_n_s_AlignmentItem___reduce_cython, NULL, __pyx_n_s_dysgu_sv_category, __pyx_d, ((PyObject *)__pyx_codeobj__6)); if (unlikely(!__pyx_t_3)) __PYX_ERR(0, 1, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_3);
  if (PyDict_SetItem(__pyx_d, __pyx_n_s_reduce_cython, __pyx_t_3) < 0) __PYX_ERR(0, 1, __pyx_L1_error)
  __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;

  /* "(tree fragment)":3
 * def __reduce_cython__(self):
 *     raise TypeError, "no default __reduce__ due to non-trivial __cinit__"
 * def __setstate_cython__(self, __pyx_state):             # <<<<<<<<<<<<<<
 *     raise TypeError, "no default __reduce__ due to non-trivial __cinit__"
 */
  __pyx_t_3 = __Pyx_CyFunction_New(&__pyx_mdef_5dysgu_11sv_category_13AlignmentItem_5__setstate_cython__, __Pyx_CYFUNCTION_CCLASS, __pyx_n_s_AlignmentItem___setstate_cython, NULL, __pyx_n_s_dysgu_sv_category, __pyx_d, ((PyObject *)__pyx_codeobj__8)); if (unlikely(!__pyx_t_3)) __PYX_ERR(0, 3, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_3);
  if (PyDict_SetItem(__pyx_d, __pyx_n_s_setstate_cython, __pyx_t_3) < 0) __PYX_ERR(0, 3, __pyx_L1_error)
  __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;

  /* "dysgu/sv_category.pyx":1
 * #cython: language_level=3             # <<<<<<<<<<<<<<
 * 
 * from dysgu.map_set_utils cimport is_overlapping
 */
  __pyx_t_3 = __Pyx_PyDict_NewPresized(0); if (unlikely(!__pyx_t_3)) __PYX_ERR(2, 1, __pyx_L1_error)
  __Pyx_GOTREF(__pyx_t_3);
  if (PyDict_SetItem(__pyx_d, __pyx_n_s_test, __pyx_t_3) < 0) __PYX_ERR(2, 1, __pyx_L1_error)
  __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;

  /*--- Wrapped vars code ---*/

  goto __pyx_L0;
  __pyx_L1_error:;
  __Pyx_XDECREF(__pyx_t_2);
  __Pyx_XDECREF(__pyx_t_3);
  if (__pyx_m) {
    if (__pyx_d && stringtab_initialized) {
      __Pyx_AddTraceback("init dysgu.sv_category", __pyx_clineno, __pyx_lineno, __pyx_filename);
    }
    #if !CYTHON_USE_MODULE_STATE
    Py_CLEAR(__pyx_m);
    #else
    Py_DECREF(__pyx_m);
    if (pystate_addmodule_run) {
      PyObject *tp, *value, *tb;
      PyErr_Fetch(&tp, &value, &tb);
      PyState_RemoveModule(&__pyx_moduledef);
      PyErr_Restore(tp, value, tb);
    }
    #endif
  } else if (!PyErr_Occurred()) {
    PyErr_SetString(PyExc_ImportError, "init dysgu.sv_category");
  }
  __pyx_L0:;
  __Pyx_RefNannyFinishContext();
  #if CYTHON_PEP489_MULTI_PHASE_INIT
  return (__pyx_m != NULL) ? 0 : -1;
  #elif PY_MAJOR_VERSION >= 3
  return __pyx_m;
  #else
  return;
  #endif
}
/* #### Code section: cleanup_globals ### */
/* #### Code section: cleanup_module ### */
/* #### Code section: main_method ### */
/* #### Code section: utility_code_pragmas ### */
#ifdef _MSC_VER
#pragma warning( push )
/* Warning 4127: conditional expression is constant
 * Cython uses constant conditional expressions to allow in inline functions to be optimized at
 * compile-time, so this warning is not useful
 */
#pragma warning( disable : 4127 )
#endif



/* #### Code section: utility_code_def ### */

/* --- Runtime support code --- */
/* Refnanny */
#if CYTHON_REFNANNY
static __Pyx_RefNannyAPIStruct *__Pyx_RefNannyImportAPI(const char *modname) {
    PyObject *m = NULL, *p = NULL;
    void *r = NULL;
    m = PyImport_ImportModule(modname);
    if (!m) goto end;
    p = PyObject_GetAttrString(m, "RefNannyAPI");
    if (!p) goto end;
    r = PyLong_AsVoidPtr(p);
end:
    Py_XDECREF(p);
    Py_XDECREF(m);
    return (__Pyx_RefNannyAPIStruct *)r;
}
#endif

/* PyErrExceptionMatches */
#if CYTHON_FAST_THREAD_STATE
static int __Pyx_PyErr_ExceptionMatchesTuple(PyObject *exc_type, PyObject *tuple) {
    Py_ssize_t i, n;
    n = PyTuple_GET_SIZE(tuple);
#if PY_MAJOR_VERSION >= 3
    for (i=0; i<n; i++) {
        if (exc_type == PyTuple_GET_ITEM(tuple, i)) return 1;
    }
#endif
    for (i=0; i<n; i++) {
        if (__Pyx_PyErr_GivenExceptionMatches(exc_type, PyTuple_GET_ITEM(tuple, i))) return 1;
    }
    return 0;
}
static CYTHON_INLINE int __Pyx_PyErr_ExceptionMatchesInState(PyThreadState* tstate, PyObject* err) {
    int result;
    PyObject *exc_type;
#if PY_VERSION_HEX >= 0x030C00A6
    PyObject *current_exception = tstate->current_exception;
    if (unlikely(!current_exception)) return 0;
    exc_type = (PyObject*) Py_TYPE(current_exception);
    if (exc_type == err) return 1;
#else
    exc_type = tstate->curexc_type;
    if (exc_type == err) return 1;
    if (unlikely(!exc_type)) return 0;
#endif
    #if CYTHON_AVOID_BORROWED_REFS
    Py_INCREF(exc_type);
    #endif
    if (unlikely(PyTuple_Check(err))) {
        result = __Pyx_PyErr_ExceptionMatchesTuple(exc_type, err);
    } else {
        result = __Pyx_PyErr_GivenExceptionMatches(exc_type, err);
    }
    #if CYTHON_AVOID_BORROWED_REFS
    Py_DECREF(exc_type);
    #endif
    return result;
}
#endif

/* PyErrFetchRestore */
#if CYTHON_FAST_THREAD_STATE
static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) {
#if PY_VERSION_HEX >= 0x030C00A6
    PyObject *tmp_value;
    assert(type == NULL || (value != NULL && type == (PyObject*) Py_TYPE(value)));
    if (value) {
        #if CYTHON_COMPILING_IN_CPYTHON
        if (unlikely(((PyBaseExceptionObject*) value)->traceback != tb))
        #endif
            PyException_SetTraceback(value, tb);
    }
    tmp_value = tstate->current_exception;
    tstate->current_exception = value;
    Py_XDECREF(tmp_value);
    Py_XDECREF(type);
    Py_XDECREF(tb);
#else
    PyObject *tmp_type, *tmp_value, *tmp_tb;
    tmp_type = tstate->curexc_type;
    tmp_value = tstate->curexc_value;
    tmp_tb = tstate->curexc_traceback;
    tstate->curexc_type = type;
    tstate->curexc_value = value;
    tstate->curexc_traceback = tb;
    Py_XDECREF(tmp_type);
    Py_XDECREF(tmp_value);
    Py_XDECREF(tmp_tb);
#endif
}
static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) {
#if PY_VERSION_HEX >= 0x030C00A6
    PyObject* exc_value;
    exc_value = tstate->current_exception;
    tstate->current_exception = 0;
    *value = exc_value;
    *type = NULL;
    *tb = NULL;
    if (exc_value) {
        *type = (PyObject*) Py_TYPE(exc_value);
        Py_INCREF(*type);
        #if CYTHON_COMPILING_IN_CPYTHON
        *tb = ((PyBaseExceptionObject*) exc_value)->traceback;
        Py_XINCREF(*tb);
        #else
        *tb = PyException_GetTraceback(exc_value);
        #endif
    }
#else
    *type = tstate->curexc_type;
    *value = tstate->curexc_value;
    *tb = tstate->curexc_traceback;
    tstate->curexc_type = 0;
    tstate->curexc_value = 0;
    tstate->curexc_traceback = 0;
#endif
}
#endif

/* PyObjectGetAttrStr */
#if CYTHON_USE_TYPE_SLOTS
static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject* attr_name) {
    PyTypeObject* tp = Py_TYPE(obj);
    if (likely(tp->tp_getattro))
        return tp->tp_getattro(obj, attr_name);
#if PY_MAJOR_VERSION < 3
    if (likely(tp->tp_getattr))
        return tp->tp_getattr(obj, PyString_AS_STRING(attr_name));
#endif
    return PyObject_GetAttr(obj, attr_name);
}
#endif

/* PyObjectGetAttrStrNoError */
#if __PYX_LIMITED_VERSION_HEX < 0x030d00A1
static void __Pyx_PyObject_GetAttrStr_ClearAttributeError(void) {
    __Pyx_PyThreadState_declare
    __Pyx_PyThreadState_assign
    if (likely(__Pyx_PyErr_ExceptionMatches(PyExc_AttributeError)))
        __Pyx_PyErr_Clear();
}
#endif
static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStrNoError(PyObject* obj, PyObject* attr_name) {
    PyObject *result;
#if __PYX_LIMITED_VERSION_HEX >= 0x030d00A1
    (void) PyObject_GetOptionalAttr(obj, attr_name, &result);
    return result;
#else
#if CYTHON_COMPILING_IN_CPYTHON && CYTHON_USE_TYPE_SLOTS && PY_VERSION_HEX >= 0x030700B1
    PyTypeObject* tp = Py_TYPE(obj);
    if (likely(tp->tp_getattro == PyObject_GenericGetAttr)) {
        return _PyObject_GenericGetAttrWithDict(obj, attr_name, NULL, 1);
    }
#endif
    result = __Pyx_PyObject_GetAttrStr(obj, attr_name);
    if (unlikely(!result)) {
        __Pyx_PyObject_GetAttrStr_ClearAttributeError();
    }
    return result;
#endif
}

/* GetBuiltinName */
static PyObject *__Pyx_GetBuiltinName(PyObject *name) {
    PyObject* result = __Pyx_PyObject_GetAttrStrNoError(__pyx_b, name);
    if (unlikely(!result) && !PyErr_Occurred()) {
        PyErr_Format(PyExc_NameError,
#if PY_MAJOR_VERSION >= 3
            "name '%U' is not defined", name);
#else
            "name '%.200s' is not defined", PyString_AS_STRING(name));
#endif
    }
    return result;
}

/* GetTopmostException */
#if CYTHON_USE_EXC_INFO_STACK && CYTHON_FAST_THREAD_STATE
static _PyErr_StackItem *
__Pyx_PyErr_GetTopmostException(PyThreadState *tstate)
{
    _PyErr_StackItem *exc_info = tstate->exc_info;
    while ((exc_info->exc_value == NULL || exc_info->exc_value == Py_None) &&
           exc_info->previous_item != NULL)
    {
        exc_info = exc_info->previous_item;
    }
    return exc_info;
}
#endif

/* SaveResetException */
#if CYTHON_FAST_THREAD_STATE
static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) {
  #if CYTHON_USE_EXC_INFO_STACK && PY_VERSION_HEX >= 0x030B00a4
    _PyErr_StackItem *exc_info = __Pyx_PyErr_GetTopmostException(tstate);
    PyObject *exc_value = exc_info->exc_value;
    if (exc_value == NULL || exc_value == Py_None) {
        *value = NULL;
        *type = NULL;
        *tb = NULL;
    } else {
        *value = exc_value;
        Py_INCREF(*value);
        *type = (PyObject*) Py_TYPE(exc_value);
        Py_INCREF(*type);
        *tb = PyException_GetTraceback(exc_value);
    }
  #elif CYTHON_USE_EXC_INFO_STACK
    _PyErr_StackItem *exc_info = __Pyx_PyErr_GetTopmostException(tstate);
    *type = exc_info->exc_type;
    *value = exc_info->exc_value;
    *tb = exc_info->exc_traceback;
    Py_XINCREF(*type);
    Py_XINCREF(*value);
    Py_XINCREF(*tb);
  #else
    *type = tstate->exc_type;
    *value = tstate->exc_value;
    *tb = tstate->exc_traceback;
    Py_XINCREF(*type);
    Py_XINCREF(*value);
    Py_XINCREF(*tb);
  #endif
}
static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) {
  #if CYTHON_USE_EXC_INFO_STACK && PY_VERSION_HEX >= 0x030B00a4
    _PyErr_StackItem *exc_info = tstate->exc_info;
    PyObject *tmp_value = exc_info->exc_value;
    exc_info->exc_value = value;
    Py_XDECREF(tmp_value);
    Py_XDECREF(type);
    Py_XDECREF(tb);
  #else
    PyObject *tmp_type, *tmp_value, *tmp_tb;
    #if CYTHON_USE_EXC_INFO_STACK
    _PyErr_StackItem *exc_info = tstate->exc_info;
    tmp_type = exc_info->exc_type;
    tmp_value = exc_info->exc_value;
    tmp_tb = exc_info->exc_traceback;
    exc_info->exc_type = type;
    exc_info->exc_value = value;
    exc_info->exc_traceback = tb;
    #else
    tmp_type = tstate->exc_type;
    tmp_value = tstate->exc_value;
    tmp_tb = tstate->exc_traceback;
    tstate->exc_type = type;
    tstate->exc_value = value;
    tstate->exc_traceback = tb;
    #endif
    Py_XDECREF(tmp_type);
    Py_XDECREF(tmp_value);
    Py_XDECREF(tmp_tb);
  #endif
}
#endif

/* GetException */
#if CYTHON_FAST_THREAD_STATE
static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb)
#else
static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb)
#endif
{
    PyObject *local_type = NULL, *local_value, *local_tb = NULL;
#if CYTHON_FAST_THREAD_STATE
    PyObject *tmp_type, *tmp_value, *tmp_tb;
  #if PY_VERSION_HEX >= 0x030C00A6
    local_value = tstate->current_exception;
    tstate->current_exception = 0;
    if (likely(local_value)) {
        local_type = (PyObject*) Py_TYPE(local_value);
        Py_INCREF(local_type);
        local_tb = PyException_GetTraceback(local_value);
    }
  #else
    local_type = tstate->curexc_type;
    local_value = tstate->curexc_value;
    local_tb = tstate->curexc_traceback;
    tstate->curexc_type = 0;
    tstate->curexc_value = 0;
    tstate->curexc_traceback = 0;
  #endif
#else
    PyErr_Fetch(&local_type, &local_value, &local_tb);
#endif
    PyErr_NormalizeException(&local_type, &local_value, &local_tb);
#if CYTHON_FAST_THREAD_STATE && PY_VERSION_HEX >= 0x030C00A6
    if (unlikely(tstate->current_exception))
#elif CYTHON_FAST_THREAD_STATE
    if (unlikely(tstate->curexc_type))
#else
    if (unlikely(PyErr_Occurred()))
#endif
        goto bad;
    #if PY_MAJOR_VERSION >= 3
    if (local_tb) {
        if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0))
            goto bad;
    }
    #endif
    Py_XINCREF(local_tb);
    Py_XINCREF(local_type);
    Py_XINCREF(local_value);
    *type = local_type;
    *value = local_value;
    *tb = local_tb;
#if CYTHON_FAST_THREAD_STATE
    #if CYTHON_USE_EXC_INFO_STACK
    {
        _PyErr_StackItem *exc_info = tstate->exc_info;
      #if PY_VERSION_HEX >= 0x030B00a4
        tmp_value = exc_info->exc_value;
        exc_info->exc_value = local_value;
        tmp_type = NULL;
        tmp_tb = NULL;
        Py_XDECREF(local_type);
        Py_XDECREF(local_tb);
      #else
        tmp_type = exc_info->exc_type;
        tmp_value = exc_info->exc_value;
        tmp_tb = exc_info->exc_traceback;
        exc_info->exc_type = local_type;
        exc_info->exc_value = local_value;
        exc_info->exc_traceback = local_tb;
      #endif
    }
    #else
    tmp_type = tstate->exc_type;
    tmp_value = tstate->exc_value;
    tmp_tb = tstate->exc_traceback;
    tstate->exc_type = local_type;
    tstate->exc_value = local_value;
    tstate->exc_traceback = local_tb;
    #endif
    Py_XDECREF(tmp_type);
    Py_XDECREF(tmp_value);
    Py_XDECREF(tmp_tb);
#else
    PyErr_SetExcInfo(local_type, local_value, local_tb);
#endif
    return 0;
bad:
    *type = 0;
    *value = 0;
    *tb = 0;
    Py_XDECREF(local_type);
    Py_XDECREF(local_value);
    Py_XDECREF(local_tb);
    return -1;
}

/* PyObjectCall */
#if CYTHON_COMPILING_IN_CPYTHON
static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw) {
    PyObject *result;
    ternaryfunc call = Py_TYPE(func)->tp_call;
    if (unlikely(!call))
        return PyObject_Call(func, arg, kw);
    #if PY_MAJOR_VERSION < 3
    if (unlikely(Py_EnterRecursiveCall((char*)" while calling a Python object")))
        return NULL;
    #else
    if (unlikely(Py_EnterRecursiveCall(" while calling a Python object")))
        return NULL;
    #endif
    result = (*call)(func, arg, kw);
    Py_LeaveRecursiveCall();
    if (unlikely(!result) && unlikely(!PyErr_Occurred())) {
        PyErr_SetString(
            PyExc_SystemError,
            "NULL result without error in PyObject_Call");
    }
    return result;
}
#endif

/* RaiseException */
#if PY_MAJOR_VERSION < 3
static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
    __Pyx_PyThreadState_declare
    CYTHON_UNUSED_VAR(cause);
    Py_XINCREF(type);
    if (!value || value == Py_None)
        value = NULL;
    else
        Py_INCREF(value);
    if (!tb || tb == Py_None)
        tb = NULL;
    else {
        Py_INCREF(tb);
        if (!PyTraceBack_Check(tb)) {
            PyErr_SetString(PyExc_TypeError,
                "raise: arg 3 must be a traceback or None");
            goto raise_error;
        }
    }
    if (PyType_Check(type)) {
#if CYTHON_COMPILING_IN_PYPY
        if (!value) {
            Py_INCREF(Py_None);
            value = Py_None;
        }
#endif
        PyErr_NormalizeException(&type, &value, &tb);
    } else {
        if (value) {
            PyErr_SetString(PyExc_TypeError,
                "instance exception may not have a separate value");
            goto raise_error;
        }
        value = type;
        type = (PyObject*) Py_TYPE(type);
        Py_INCREF(type);
        if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
            PyErr_SetString(PyExc_TypeError,
                "raise: exception class must be a subclass of BaseException");
            goto raise_error;
        }
    }
    __Pyx_PyThreadState_assign
    __Pyx_ErrRestore(type, value, tb);
    return;
raise_error:
    Py_XDECREF(value);
    Py_XDECREF(type);
    Py_XDECREF(tb);
    return;
}
#else
static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
    PyObject* owned_instance = NULL;
    if (tb == Py_None) {
        tb = 0;
    } else if (tb && !PyTraceBack_Check(tb)) {
        PyErr_SetString(PyExc_TypeError,
            "raise: arg 3 must be a traceback or None");
        goto bad;
    }
    if (value == Py_None)
        value = 0;
    if (PyExceptionInstance_Check(type)) {
        if (value) {
            PyErr_SetString(PyExc_TypeError,
                "instance exception may not have a separate value");
            goto bad;
        }
        value = type;
        type = (PyObject*) Py_TYPE(value);
    } else if (PyExceptionClass_Check(type)) {
        PyObject *instance_class = NULL;
        if (value && PyExceptionInstance_Check(value)) {
            instance_class = (PyObject*) Py_TYPE(value);
            if (instance_class != type) {
                int is_subclass = PyObject_IsSubclass(instance_class, type);
                if (!is_subclass) {
                    instance_class = NULL;
                } else if (unlikely(is_subclass == -1)) {
                    goto bad;
                } else {
                    type = instance_class;
                }
            }
        }
        if (!instance_class) {
            PyObject *args;
            if (!value)
                args = PyTuple_New(0);
            else if (PyTuple_Check(value)) {
                Py_INCREF(value);
                args = value;
            } else
                args = PyTuple_Pack(1, value);
            if (!args)
                goto bad;
            owned_instance = PyObject_Call(type, args, NULL);
            Py_DECREF(args);
            if (!owned_instance)
                goto bad;
            value = owned_instance;
            if (!PyExceptionInstance_Check(value)) {
                PyErr_Format(PyExc_TypeError,
                             "calling %R should have returned an instance of "
                             "BaseException, not %R",
                             type, Py_TYPE(value));
                goto bad;
            }
        }
    } else {
        PyErr_SetString(PyExc_TypeError,
            "raise: exception class must be a subclass of BaseException");
        goto bad;
    }
    if (cause) {
        PyObject *fixed_cause;
        if (cause == Py_None) {
            fixed_cause = NULL;
        } else if (PyExceptionClass_Check(cause)) {
            fixed_cause = PyObject_CallObject(cause, NULL);
            if (fixed_cause == NULL)
                goto bad;
        } else if (PyExceptionInstance_Check(cause)) {
            fixed_cause = cause;
            Py_INCREF(fixed_cause);
        } else {
            PyErr_SetString(PyExc_TypeError,
                            "exception causes must derive from "
                            "BaseException");
            goto bad;
        }
        PyException_SetCause(value, fixed_cause);
    }
    PyErr_SetObject(type, value);
    if (tb) {
      #if PY_VERSION_HEX >= 0x030C00A6
        PyException_SetTraceback(value, tb);
      #elif CYTHON_FAST_THREAD_STATE
        PyThreadState *tstate = __Pyx_PyThreadState_Current;
        PyObject* tmp_tb = tstate->curexc_traceback;
        if (tb != tmp_tb) {
            Py_INCREF(tb);
            tstate->curexc_traceback = tb;
            Py_XDECREF(tmp_tb);
        }
#else
        PyObject *tmp_type, *tmp_value, *tmp_tb;
        PyErr_Fetch(&tmp_type, &tmp_value, &tmp_tb);
        Py_INCREF(tb);
        PyErr_Restore(tmp_type, tmp_value, tb);
        Py_XDECREF(tmp_tb);
#endif
    }
bad:
    Py_XDECREF(owned_instance);
    return;
}
#endif

/* TupleAndListFromArray */
#if CYTHON_COMPILING_IN_CPYTHON
static CYTHON_INLINE void __Pyx_copy_object_array(PyObject *const *CYTHON_RESTRICT src, PyObject** CYTHON_RESTRICT dest, Py_ssize_t length) {
    PyObject *v;
    Py_ssize_t i;
    for (i = 0; i < length; i++) {
        v = dest[i] = src[i];
        Py_INCREF(v);
    }
}
static CYTHON_INLINE PyObject *
__Pyx_PyTuple_FromArray(PyObject *const *src, Py_ssize_t n)
{
    PyObject *res;
    if (n <= 0) {
        Py_INCREF(__pyx_empty_tuple);
        return __pyx_empty_tuple;
    }
    res = PyTuple_New(n);
    if (unlikely(res == NULL)) return NULL;
    __Pyx_copy_object_array(src, ((PyTupleObject*)res)->ob_item, n);
    return res;
}
static CYTHON_INLINE PyObject *
__Pyx_PyList_FromArray(PyObject *const *src, Py_ssize_t n)
{
    PyObject *res;
    if (n <= 0) {
        return PyList_New(0);
    }
    res = PyList_New(n);
    if (unlikely(res == NULL)) return NULL;
    __Pyx_copy_object_array(src, ((PyListObject*)res)->ob_item, n);
    return res;
}
#endif

/* BytesEquals */
static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int equals) {
#if CYTHON_COMPILING_IN_PYPY || CYTHON_COMPILING_IN_LIMITED_API
    return PyObject_RichCompareBool(s1, s2, equals);
#else
    if (s1 == s2) {
        return (equals == Py_EQ);
    } else if (PyBytes_CheckExact(s1) & PyBytes_CheckExact(s2)) {
        const char *ps1, *ps2;
        Py_ssize_t length = PyBytes_GET_SIZE(s1);
        if (length != PyBytes_GET_SIZE(s2))
            return (equals == Py_NE);
        ps1 = PyBytes_AS_STRING(s1);
        ps2 = PyBytes_AS_STRING(s2);
        if (ps1[0] != ps2[0]) {
            return (equals == Py_NE);
        } else if (length == 1) {
            return (equals == Py_EQ);
        } else {
            int result;
#if CYTHON_USE_UNICODE_INTERNALS && (PY_VERSION_HEX < 0x030B0000)
            Py_hash_t hash1, hash2;
            hash1 = ((PyBytesObject*)s1)->ob_shash;
            hash2 = ((PyBytesObject*)s2)->ob_shash;
            if (hash1 != hash2 && hash1 != -1 && hash2 != -1) {
                return (equals == Py_NE);
            }
#endif
            result = memcmp(ps1, ps2, (size_t)length);
            return (equals == Py_EQ) ? (result == 0) : (result != 0);
        }
    } else if ((s1 == Py_None) & PyBytes_CheckExact(s2)) {
        return (equals == Py_NE);
    } else if ((s2 == Py_None) & PyBytes_CheckExact(s1)) {
        return (equals == Py_NE);
    } else {
        int result;
        PyObject* py_result = PyObject_RichCompare(s1, s2, equals);
        if (!py_result)
            return -1;
        result = __Pyx_PyObject_IsTrue(py_result);
        Py_DECREF(py_result);
        return result;
    }
#endif
}

/* UnicodeEquals */
static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals) {
#if CYTHON_COMPILING_IN_PYPY || CYTHON_COMPILING_IN_LIMITED_API
    return PyObject_RichCompareBool(s1, s2, equals);
#else
#if PY_MAJOR_VERSION < 3
    PyObject* owned_ref = NULL;
#endif
    int s1_is_unicode, s2_is_unicode;
    if (s1 == s2) {
        goto return_eq;
    }
    s1_is_unicode = PyUnicode_CheckExact(s1);
    s2_is_unicode = PyUnicode_CheckExact(s2);
#if PY_MAJOR_VERSION < 3
    if ((s1_is_unicode & (!s2_is_unicode)) && PyString_CheckExact(s2)) {
        owned_ref = PyUnicode_FromObject(s2);
        if (unlikely(!owned_ref))
            return -1;
        s2 = owned_ref;
        s2_is_unicode = 1;
    } else if ((s2_is_unicode & (!s1_is_unicode)) && PyString_CheckExact(s1)) {
        owned_ref = PyUnicode_FromObject(s1);
        if (unlikely(!owned_ref))
            return -1;
        s1 = owned_ref;
        s1_is_unicode = 1;
    } else if (((!s2_is_unicode) & (!s1_is_unicode))) {
        return __Pyx_PyBytes_Equals(s1, s2, equals);
    }
#endif
    if (s1_is_unicode & s2_is_unicode) {
        Py_ssize_t length;
        int kind;
        void *data1, *data2;
        if (unlikely(__Pyx_PyUnicode_READY(s1) < 0) || unlikely(__Pyx_PyUnicode_READY(s2) < 0))
            return -1;
        length = __Pyx_PyUnicode_GET_LENGTH(s1);
        if (length != __Pyx_PyUnicode_GET_LENGTH(s2)) {
            goto return_ne;
        }
#if CYTHON_USE_UNICODE_INTERNALS
        {
            Py_hash_t hash1, hash2;
        #if CYTHON_PEP393_ENABLED
            hash1 = ((PyASCIIObject*)s1)->hash;
            hash2 = ((PyASCIIObject*)s2)->hash;
        #else
            hash1 = ((PyUnicodeObject*)s1)->hash;
            hash2 = ((PyUnicodeObject*)s2)->hash;
        #endif
            if (hash1 != hash2 && hash1 != -1 && hash2 != -1) {
                goto return_ne;
            }
        }
#endif
        kind = __Pyx_PyUnicode_KIND(s1);
        if (kind != __Pyx_PyUnicode_KIND(s2)) {
            goto return_ne;
        }
        data1 = __Pyx_PyUnicode_DATA(s1);
        data2 = __Pyx_PyUnicode_DATA(s2);
        if (__Pyx_PyUnicode_READ(kind, data1, 0) != __Pyx_PyUnicode_READ(kind, data2, 0)) {
            goto return_ne;
        } else if (length == 1) {
            goto return_eq;
        } else {
            int result = memcmp(data1, data2, (size_t)(length * kind));
            #if PY_MAJOR_VERSION < 3
            Py_XDECREF(owned_ref);
            #endif
            return (equals == Py_EQ) ? (result == 0) : (result != 0);
        }
    } else if ((s1 == Py_None) & s2_is_unicode) {
        goto return_ne;
    } else if ((s2 == Py_None) & s1_is_unicode) {
        goto return_ne;
    } else {
        int result;
        PyObject* py_result = PyObject_RichCompare(s1, s2, equals);
        #if PY_MAJOR_VERSION < 3
        Py_XDECREF(owned_ref);
        #endif
        if (!py_result)
            return -1;
        result = __Pyx_PyObject_IsTrue(py_result);
        Py_DECREF(py_result);
        return result;
    }
return_eq:
    #if PY_MAJOR_VERSION < 3
    Py_XDECREF(owned_ref);
    #endif
    return (equals == Py_EQ);
return_ne:
    #if PY_MAJOR_VERSION < 3
    Py_XDECREF(owned_ref);
    #endif
    return (equals == Py_NE);
#endif
}

/* fastcall */
#if CYTHON_METH_FASTCALL
static CYTHON_INLINE PyObject * __Pyx_GetKwValue_FASTCALL(PyObject *kwnames, PyObject *const *kwvalues, PyObject *s)
{
    Py_ssize_t i, n = PyTuple_GET_SIZE(kwnames);
    for (i = 0; i < n; i++)
    {
        if (s == PyTuple_GET_ITEM(kwnames, i)) return kwvalues[i];
    }
    for (i = 0; i < n; i++)
    {
        int eq = __Pyx_PyUnicode_Equals(s, PyTuple_GET_ITEM(kwnames, i), Py_EQ);
        if (unlikely(eq != 0)) {
            if (unlikely(eq < 0)) return NULL;
            return kwvalues[i];
        }
    }
    return NULL;
}
#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030d0000
CYTHON_UNUSED static PyObject *__Pyx_KwargsAsDict_FASTCALL(PyObject *kwnames, PyObject *const *kwvalues) {
    Py_ssize_t i, nkwargs = PyTuple_GET_SIZE(kwnames);
    PyObject *dict;
    dict = PyDict_New();
    if (unlikely(!dict))
        return NULL;
    for (i=0; i<nkwargs; i++) {
        PyObject *key = PyTuple_GET_ITEM(kwnames, i);
        if (unlikely(PyDict_SetItem(dict, key, kwvalues[i]) < 0))
            goto bad;
    }
    return dict;
bad:
    Py_DECREF(dict);
    return NULL;
}
#endif
#endif

/* RaiseArgTupleInvalid */
static void __Pyx_RaiseArgtupleInvalid(
    const char* func_name,
    int exact,
    Py_ssize_t num_min,
    Py_ssize_t num_max,
    Py_ssize_t num_found)
{
    Py_ssize_t num_expected;
    const char *more_or_less;
    if (num_found < num_min) {
        num_expected = num_min;
        more_or_less = "at least";
    } else {
        num_expected = num_max;
        more_or_less = "at most";
    }
    if (exact) {
        more_or_less = "exactly";
    }
    PyErr_Format(PyExc_TypeError,
                 "%.200s() takes %.8s %" CYTHON_FORMAT_SSIZE_T "d positional argument%.1s (%" CYTHON_FORMAT_SSIZE_T "d given)",
                 func_name, more_or_less, num_expected,
                 (num_expected == 1) ? "" : "s", num_found);
}

/* RaiseDoubleKeywords */
static void __Pyx_RaiseDoubleKeywordsError(
    const char* func_name,
    PyObject* kw_name)
{
    PyErr_Format(PyExc_TypeError,
        #if PY_MAJOR_VERSION >= 3
        "%s() got multiple values for keyword argument '%U'", func_name, kw_name);
        #else
        "%s() got multiple values for keyword argument '%s'", func_name,
        PyString_AsString(kw_name));
        #endif
}

/* ParseKeywords */
static int __Pyx_ParseOptionalKeywords(
    PyObject *kwds,
    PyObject *const *kwvalues,
    PyObject **argnames[],
    PyObject *kwds2,
    PyObject *values[],
    Py_ssize_t num_pos_args,
    const char* function_name)
{
    PyObject *key = 0, *value = 0;
    Py_ssize_t pos = 0;
    PyObject*** name;
    PyObject*** first_kw_arg = argnames + num_pos_args;
    int kwds_is_tuple = CYTHON_METH_FASTCALL && likely(PyTuple_Check(kwds));
    while (1) {
        Py_XDECREF(key); key = NULL;
        Py_XDECREF(value); value = NULL;
        if (kwds_is_tuple) {
            Py_ssize_t size;
#if CYTHON_ASSUME_SAFE_MACROS
            size = PyTuple_GET_SIZE(kwds);
#else
            size = PyTuple_Size(kwds);
            if (size < 0) goto bad;
#endif
            if (pos >= size) break;
#if CYTHON_AVOID_BORROWED_REFS
            key = __Pyx_PySequence_ITEM(kwds, pos);
            if (!key) goto bad;
#elif CYTHON_ASSUME_SAFE_MACROS
            key = PyTuple_GET_ITEM(kwds, pos);
#else
            key = PyTuple_GetItem(kwds, pos);
            if (!key) goto bad;
#endif
            value = kwvalues[pos];
            pos++;
        }
        else
        {
            if (!PyDict_Next(kwds, &pos, &key, &value)) break;
#if CYTHON_AVOID_BORROWED_REFS
            Py_INCREF(key);
#endif
        }
        name = first_kw_arg;
        while (*name && (**name != key)) name++;
        if (*name) {
            values[name-argnames] = value;
#if CYTHON_AVOID_BORROWED_REFS
            Py_INCREF(value);
            Py_DECREF(key);
#endif
            key = NULL;
            value = NULL;
            continue;
        }
#if !CYTHON_AVOID_BORROWED_REFS
        Py_INCREF(key);
#endif
        Py_INCREF(value);
        name = first_kw_arg;
        #if PY_MAJOR_VERSION < 3
        if (likely(PyString_Check(key))) {
            while (*name) {
                if ((CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**name) == PyString_GET_SIZE(key))
                        && _PyString_Eq(**name, key)) {
                    values[name-argnames] = value;
#if CYTHON_AVOID_BORROWED_REFS
                    value = NULL;
#endif
                    break;
                }
                name++;
            }
            if (*name) continue;
            else {
                PyObject*** argname = argnames;
                while (argname != first_kw_arg) {
                    if ((**argname == key) || (
                            (CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**argname) == PyString_GET_SIZE(key))
                             && _PyString_Eq(**argname, key))) {
                        goto arg_passed_twice;
                    }
                    argname++;
                }
            }
        } else
        #endif
        if (likely(PyUnicode_Check(key))) {
            while (*name) {
                int cmp = (
                #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
                    (__Pyx_PyUnicode_GET_LENGTH(**name) != __Pyx_PyUnicode_GET_LENGTH(key)) ? 1 :
                #endif
                    PyUnicode_Compare(**name, key)
                );
                if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
                if (cmp == 0) {
                    values[name-argnames] = value;
#if CYTHON_AVOID_BORROWED_REFS
                    value = NULL;
#endif
                    break;
                }
                name++;
            }
            if (*name) continue;
            else {
                PyObject*** argname = argnames;
                while (argname != first_kw_arg) {
                    int cmp = (**argname == key) ? 0 :
                    #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
                        (__Pyx_PyUnicode_GET_LENGTH(**argname) != __Pyx_PyUnicode_GET_LENGTH(key)) ? 1 :
                    #endif
                        PyUnicode_Compare(**argname, key);
                    if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
                    if (cmp == 0) goto arg_passed_twice;
                    argname++;
                }
            }
        } else
            goto invalid_keyword_type;
        if (kwds2) {
            if (unlikely(PyDict_SetItem(kwds2, key, value))) goto bad;
        } else {
            goto invalid_keyword;
        }
    }
    Py_XDECREF(key);
    Py_XDECREF(value);
    return 0;
arg_passed_twice:
    __Pyx_RaiseDoubleKeywordsError(function_name, key);
    goto bad;
invalid_keyword_type:
    PyErr_Format(PyExc_TypeError,
        "%.200s() keywords must be strings", function_name);
    goto bad;
invalid_keyword:
    #if PY_MAJOR_VERSION < 3
    PyErr_Format(PyExc_TypeError,
        "%.200s() got an unexpected keyword argument '%.200s'",
        function_name, PyString_AsString(key));
    #else
    PyErr_Format(PyExc_TypeError,
        "%s() got an unexpected keyword argument '%U'",
        function_name, key);
    #endif
bad:
    Py_XDECREF(key);
    Py_XDECREF(value);
    return -1;
}

/* RaiseUnexpectedTypeError */
static int
__Pyx_RaiseUnexpectedTypeError(const char *expected, PyObject *obj)
{
    __Pyx_TypeName obj_type_name = __Pyx_PyType_GetName(Py_TYPE(obj));
    PyErr_Format(PyExc_TypeError, "Expected %s, got " __Pyx_FMT_TYPENAME,
                 expected, obj_type_name);
    __Pyx_DECREF_TypeName(obj_type_name);
    return 0;
}

/* KeywordStringCheck */
static int __Pyx_CheckKeywordStrings(
    PyObject *kw,
    const char* function_name,
    int kw_allowed)
{
    PyObject* key = 0;
    Py_ssize_t pos = 0;
#if CYTHON_COMPILING_IN_PYPY
    if (!kw_allowed && PyDict_Next(kw, &pos, &key, 0))
        goto invalid_keyword;
    return 1;
#else
    if (CYTHON_METH_FASTCALL && likely(PyTuple_Check(kw))) {
        Py_ssize_t kwsize;
#if CYTHON_ASSUME_SAFE_MACROS
        kwsize = PyTuple_GET_SIZE(kw);
#else
        kwsize = PyTuple_Size(kw);
        if (kwsize < 0) return 0;
#endif
        if (unlikely(kwsize == 0))
            return 1;
        if (!kw_allowed) {
#if CYTHON_ASSUME_SAFE_MACROS
            key = PyTuple_GET_ITEM(kw, 0);
#else
            key = PyTuple_GetItem(kw, pos);
            if (!key) return 0;
#endif
            goto invalid_keyword;
        }
#if PY_VERSION_HEX < 0x03090000
        for (pos = 0; pos < kwsize; pos++) {
#if CYTHON_ASSUME_SAFE_MACROS
            key = PyTuple_GET_ITEM(kw, pos);
#else
            key = PyTuple_GetItem(kw, pos);
            if (!key) return 0;
#endif
            if (unlikely(!PyUnicode_Check(key)))
                goto invalid_keyword_type;
        }
#endif
        return 1;
    }
    while (PyDict_Next(kw, &pos, &key, 0)) {
        #if PY_MAJOR_VERSION < 3
        if (unlikely(!PyString_Check(key)))
        #endif
            if (unlikely(!PyUnicode_Check(key)))
                goto invalid_keyword_type;
    }
    if (!kw_allowed && unlikely(key))
        goto invalid_keyword;
    return 1;
invalid_keyword_type:
    PyErr_Format(PyExc_TypeError,
        "%.200s() keywords must be strings", function_name);
    return 0;
#endif
invalid_keyword:
    #if PY_MAJOR_VERSION < 3
    PyErr_Format(PyExc_TypeError,
        "%.200s() got an unexpected keyword argument '%.200s'",
        function_name, PyString_AsString(key));
    #else
    PyErr_Format(PyExc_TypeError,
        "%s() got an unexpected keyword argument '%U'",
        function_name, key);
    #endif
    return 0;
}

/* CIntToDigits */
static const char DIGIT_PAIRS_10[2*10*10+1] = {
    "00010203040506070809"
    "10111213141516171819"
    "20212223242526272829"
    "30313233343536373839"
    "40414243444546474849"
    "50515253545556575859"
    "60616263646566676869"
    "70717273747576777879"
    "80818283848586878889"
    "90919293949596979899"
};
static const char DIGIT_PAIRS_8[2*8*8+1] = {
    "0001020304050607"
    "1011121314151617"
    "2021222324252627"
    "3031323334353637"
    "4041424344454647"
    "5051525354555657"
    "6061626364656667"
    "7071727374757677"
};
static const char DIGITS_HEX[2*16+1] = {
    "0123456789abcdef"
    "0123456789ABCDEF"
};

/* BuildPyUnicode */
static PyObject* __Pyx_PyUnicode_BuildFromAscii(Py_ssize_t ulength, char* chars, int clength,
                                                int prepend_sign, char padding_char) {
    PyObject *uval;
    Py_ssize_t uoffset = ulength - clength;
#if CYTHON_USE_UNICODE_INTERNALS
    Py_ssize_t i;
#if CYTHON_PEP393_ENABLED
    void *udata;
    uval = PyUnicode_New(ulength, 127);
    if (unlikely(!uval)) return NULL;
    udata = PyUnicode_DATA(uval);
#else
    Py_UNICODE *udata;
    uval = PyUnicode_FromUnicode(NULL, ulength);
    if (unlikely(!uval)) return NULL;
    udata = PyUnicode_AS_UNICODE(uval);
#endif
    if (uoffset > 0) {
        i = 0;
        if (prepend_sign) {
            __Pyx_PyUnicode_WRITE(PyUnicode_1BYTE_KIND, udata, 0, '-');
            i++;
        }
        for (; i < uoffset; i++) {
            __Pyx_PyUnicode_WRITE(PyUnicode_1BYTE_KIND, udata, i, padding_char);
        }
    }
    for (i=0; i < clength; i++) {
        __Pyx_PyUnicode_WRITE(PyUnicode_1BYTE_KIND, udata, uoffset+i, chars[i]);
    }
#else
    {
        PyObject *sign = NULL, *padding = NULL;
        uval = NULL;
        if (uoffset > 0) {
            prepend_sign = !!prepend_sign;
            if (uoffset > prepend_sign) {
                padding = PyUnicode_FromOrdinal(padding_char);
                if (likely(padding) && uoffset > prepend_sign + 1) {
                    PyObject *tmp;
                    PyObject *repeat = PyInt_FromSsize_t(uoffset - prepend_sign);
                    if (unlikely(!repeat)) goto done_or_error;
                    tmp = PyNumber_Multiply(padding, repeat);
                    Py_DECREF(repeat);
                    Py_DECREF(padding);
                    padding = tmp;
                }
                if (unlikely(!padding)) goto done_or_error;
            }
            if (prepend_sign) {
                sign = PyUnicode_FromOrdinal('-');
                if (unlikely(!sign)) goto done_or_error;
            }
        }
        uval = PyUnicode_DecodeASCII(chars, clength, NULL);
        if (likely(uval) && padding) {
            PyObject *tmp = PyNumber_Add(padding, uval);
            Py_DECREF(uval);
            uval = tmp;
        }
        if (likely(uval) && sign) {
            PyObject *tmp = PyNumber_Add(sign, uval);
            Py_DECREF(uval);
            uval = tmp;
        }
done_or_error:
        Py_XDECREF(padding);
        Py_XDECREF(sign);
    }
#endif
    return uval;
}

/* CIntToPyUnicode */
static CYTHON_INLINE PyObject* __Pyx_PyUnicode_From_int(int value, Py_ssize_t width, char padding_char, char format_char) {
    char digits[sizeof(int)*3+2];
    char *dpos, *end = digits + sizeof(int)*3+2;
    const char *hex_digits = DIGITS_HEX;
    Py_ssize_t length, ulength;
    int prepend_sign, last_one_off;
    int remaining;
#ifdef __Pyx_HAS_GCC_DIAGNOSTIC
#pragma GCC diagnostic push
#pragma GCC diagnostic ignored "-Wconversion"
#endif
    const int neg_one = (int) -1, const_zero = (int) 0;
#ifdef __Pyx_HAS_GCC_DIAGNOSTIC
#pragma GCC diagnostic pop
#endif
    const int is_unsigned = neg_one > const_zero;
    if (format_char == 'X') {
        hex_digits += 16;
        format_char = 'x';
    }
    remaining = value;
    last_one_off = 0;
    dpos = end;
    do {
        int digit_pos;
        switch (format_char) {
        case 'o':
            digit_pos = abs((int)(remaining % (8*8)));
            remaining = (int) (remaining / (8*8));
            dpos -= 2;
            memcpy(dpos, DIGIT_PAIRS_8 + digit_pos * 2, 2);
            last_one_off = (digit_pos < 8);
            break;
        case 'd':
            digit_pos = abs((int)(remaining % (10*10)));
            remaining = (int) (remaining / (10*10));
            dpos -= 2;
            memcpy(dpos, DIGIT_PAIRS_10 + digit_pos * 2, 2);
            last_one_off = (digit_pos < 10);
            break;
        case 'x':
            *(--dpos) = hex_digits[abs((int)(remaining % 16))];
            remaining = (int) (remaining / 16);
            break;
        default:
            assert(0);
            break;
        }
    } while (unlikely(remaining != 0));
    assert(!last_one_off || *dpos == '0');
    dpos += last_one_off;
    length = end - dpos;
    ulength = length;
    prepend_sign = 0;
    if (!is_unsigned && value <= neg_one) {
        if (padding_char == ' ' || width <= length + 1) {
            *(--dpos) = '-';
            ++length;
        } else {
            prepend_sign = 1;
        }
        ++ulength;
    }
    if (width > ulength) {
        ulength = width;
    }
    if (ulength == 1) {
        return PyUnicode_FromOrdinal(*dpos);
    }
    return __Pyx_PyUnicode_BuildFromAscii(ulength, dpos, (int) length, prepend_sign, padding_char);
}

/* JoinPyUnicode */
static PyObject* __Pyx_PyUnicode_Join(PyObject* value_tuple, Py_ssize_t value_count, Py_ssize_t result_ulength,
                                      Py_UCS4 max_char) {
#if CYTHON_USE_UNICODE_INTERNALS && CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS
    PyObject *result_uval;
    int result_ukind, kind_shift;
    Py_ssize_t i, char_pos;
    void *result_udata;
    CYTHON_MAYBE_UNUSED_VAR(max_char);
#if CYTHON_PEP393_ENABLED
    result_uval = PyUnicode_New(result_ulength, max_char);
    if (unlikely(!result_uval)) return NULL;
    result_ukind = (max_char <= 255) ? PyUnicode_1BYTE_KIND : (max_char <= 65535) ? PyUnicode_2BYTE_KIND : PyUnicode_4BYTE_KIND;
    kind_shift = (result_ukind == PyUnicode_4BYTE_KIND) ? 2 : result_ukind - 1;
    result_udata = PyUnicode_DATA(result_uval);
#else
    result_uval = PyUnicode_FromUnicode(NULL, result_ulength);
    if (unlikely(!result_uval)) return NULL;
    result_ukind = sizeof(Py_UNICODE);
    kind_shift = (result_ukind == 4) ? 2 : result_ukind - 1;
    result_udata = PyUnicode_AS_UNICODE(result_uval);
#endif
    assert(kind_shift == 2 || kind_shift == 1 || kind_shift == 0);
    char_pos = 0;
    for (i=0; i < value_count; i++) {
        int ukind;
        Py_ssize_t ulength;
        void *udata;
        PyObject *uval = PyTuple_GET_ITEM(value_tuple, i);
        if (unlikely(__Pyx_PyUnicode_READY(uval)))
            goto bad;
        ulength = __Pyx_PyUnicode_GET_LENGTH(uval);
        if (unlikely(!ulength))
            continue;
        if (unlikely((PY_SSIZE_T_MAX >> kind_shift) - ulength < char_pos))
            goto overflow;
        ukind = __Pyx_PyUnicode_KIND(uval);
        udata = __Pyx_PyUnicode_DATA(uval);
        if (!CYTHON_PEP393_ENABLED || ukind == result_ukind) {
            memcpy((char *)result_udata + (char_pos << kind_shift), udata, (size_t) (ulength << kind_shift));
        } else {
            #if PY_VERSION_HEX >= 0x030d0000
            if (unlikely(PyUnicode_CopyCharacters(result_uval, char_pos, uval, 0, ulength) < 0)) goto bad;
            #elif CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030300F0 || defined(_PyUnicode_FastCopyCharacters)
            _PyUnicode_FastCopyCharacters(result_uval, char_pos, uval, 0, ulength);
            #else
            Py_ssize_t j;
            for (j=0; j < ulength; j++) {
                Py_UCS4 uchar = __Pyx_PyUnicode_READ(ukind, udata, j);
                __Pyx_PyUnicode_WRITE(result_ukind, result_udata, char_pos+j, uchar);
            }
            #endif
        }
        char_pos += ulength;
    }
    return result_uval;
overflow:
    PyErr_SetString(PyExc_OverflowError, "join() result is too long for a Python string");
bad:
    Py_DECREF(result_uval);
    return NULL;
#else
    CYTHON_UNUSED_VAR(max_char);
    CYTHON_UNUSED_VAR(result_ulength);
    CYTHON_UNUSED_VAR(value_count);
    return PyUnicode_Join(__pyx_empty_unicode, value_tuple);
#endif
}

/* FixUpExtensionType */
#if CYTHON_USE_TYPE_SPECS
static int __Pyx_fix_up_extension_type_from_spec(PyType_Spec *spec, PyTypeObject *type) {
#if PY_VERSION_HEX > 0x030900B1 || CYTHON_COMPILING_IN_LIMITED_API
    CYTHON_UNUSED_VAR(spec);
    CYTHON_UNUSED_VAR(type);
#else
    const PyType_Slot *slot = spec->slots;
    while (slot && slot->slot && slot->slot != Py_tp_members)
        slot++;
    if (slot && slot->slot == Py_tp_members) {
        int changed = 0;
#if !(PY_VERSION_HEX <= 0x030900b1 && CYTHON_COMPILING_IN_CPYTHON)
        const
#endif
            PyMemberDef *memb = (PyMemberDef*) slot->pfunc;
        while (memb && memb->name) {
            if (memb->name[0] == '_' && memb->name[1] == '_') {
#if PY_VERSION_HEX < 0x030900b1
                if (strcmp(memb->name, "__weaklistoffset__") == 0) {
                    assert(memb->type == T_PYSSIZET);
                    assert(memb->flags == READONLY);
                    type->tp_weaklistoffset = memb->offset;
                    changed = 1;
                }
                else if (strcmp(memb->name, "__dictoffset__") == 0) {
                    assert(memb->type == T_PYSSIZET);
                    assert(memb->flags == READONLY);
                    type->tp_dictoffset = memb->offset;
                    changed = 1;
                }
#if CYTHON_METH_FASTCALL
                else if (strcmp(memb->name, "__vectorcalloffset__") == 0) {
                    assert(memb->type == T_PYSSIZET);
                    assert(memb->flags == READONLY);
#if PY_VERSION_HEX >= 0x030800b4
                    type->tp_vectorcall_offset = memb->offset;
#else
                    type->tp_print = (printfunc) memb->offset;
#endif
                    changed = 1;
                }
#endif
#else
                if ((0));
#endif
#if PY_VERSION_HEX <= 0x030900b1 && CYTHON_COMPILING_IN_CPYTHON
                else if (strcmp(memb->name, "__module__") == 0) {
                    PyObject *descr;
                    assert(memb->type == T_OBJECT);
                    assert(memb->flags == 0 || memb->flags == READONLY);
                    descr = PyDescr_NewMember(type, memb);
                    if (unlikely(!descr))
                        return -1;
                    if (unlikely(PyDict_SetItem(type->tp_dict, PyDescr_NAME(descr), descr) < 0)) {
                        Py_DECREF(descr);
                        return -1;
                    }
                    Py_DECREF(descr);
                    changed = 1;
                }
#endif
            }
            memb++;
        }
        if (changed)
            PyType_Modified(type);
    }
#endif
    return 0;
}
#endif

/* PyFunctionFastCall */
#if CYTHON_FAST_PYCALL && !CYTHON_VECTORCALL
static PyObject* __Pyx_PyFunction_FastCallNoKw(PyCodeObject *co, PyObject **args, Py_ssize_t na,
                                               PyObject *globals) {
    PyFrameObject *f;
    PyThreadState *tstate = __Pyx_PyThreadState_Current;
    PyObject **fastlocals;
    Py_ssize_t i;
    PyObject *result;
    assert(globals != NULL);
    /* XXX Perhaps we should create a specialized
       PyFrame_New() that doesn't take locals, but does
       take builtins without sanity checking them.
       */
    assert(tstate != NULL);
    f = PyFrame_New(tstate, co, globals, NULL);
    if (f == NULL) {
        return NULL;
    }
    fastlocals = __Pyx_PyFrame_GetLocalsplus(f);
    for (i = 0; i < na; i++) {
        Py_INCREF(*args);
        fastlocals[i] = *args++;
    }
    result = PyEval_EvalFrameEx(f,0);
    ++tstate->recursion_depth;
    Py_DECREF(f);
    --tstate->recursion_depth;
    return result;
}
static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, Py_ssize_t nargs, PyObject *kwargs) {
    PyCodeObject *co = (PyCodeObject *)PyFunction_GET_CODE(func);
    PyObject *globals = PyFunction_GET_GLOBALS(func);
    PyObject *argdefs = PyFunction_GET_DEFAULTS(func);
    PyObject *closure;
#if PY_MAJOR_VERSION >= 3
    PyObject *kwdefs;
#endif
    PyObject *kwtuple, **k;
    PyObject **d;
    Py_ssize_t nd;
    Py_ssize_t nk;
    PyObject *result;
    assert(kwargs == NULL || PyDict_Check(kwargs));
    nk = kwargs ? PyDict_Size(kwargs) : 0;
    #if PY_MAJOR_VERSION < 3
    if (unlikely(Py_EnterRecursiveCall((char*)" while calling a Python object"))) {
        return NULL;
    }
    #else
    if (unlikely(Py_EnterRecursiveCall(" while calling a Python object"))) {
        return NULL;
    }
    #endif
    if (
#if PY_MAJOR_VERSION >= 3
            co->co_kwonlyargcount == 0 &&
#endif
            likely(kwargs == NULL || nk == 0) &&
            co->co_flags == (CO_OPTIMIZED | CO_NEWLOCALS | CO_NOFREE)) {
        if (argdefs == NULL && co->co_argcount == nargs) {
            result = __Pyx_PyFunction_FastCallNoKw(co, args, nargs, globals);
            goto done;
        }
        else if (nargs == 0 && argdefs != NULL
                 && co->co_argcount == Py_SIZE(argdefs)) {
            /* function called with no arguments, but all parameters have
               a default value: use default values as arguments .*/
            args = &PyTuple_GET_ITEM(argdefs, 0);
            result =__Pyx_PyFunction_FastCallNoKw(co, args, Py_SIZE(argdefs), globals);
            goto done;
        }
    }
    if (kwargs != NULL) {
        Py_ssize_t pos, i;
        kwtuple = PyTuple_New(2 * nk);
        if (kwtuple == NULL) {
            result = NULL;
            goto done;
        }
        k = &PyTuple_GET_ITEM(kwtuple, 0);
        pos = i = 0;
        while (PyDict_Next(kwargs, &pos, &k[i], &k[i+1])) {
            Py_INCREF(k[i]);
            Py_INCREF(k[i+1]);
            i += 2;
        }
        nk = i / 2;
    }
    else {
        kwtuple = NULL;
        k = NULL;
    }
    closure = PyFunction_GET_CLOSURE(func);
#if PY_MAJOR_VERSION >= 3
    kwdefs = PyFunction_GET_KW_DEFAULTS(func);
#endif
    if (argdefs != NULL) {
        d = &PyTuple_GET_ITEM(argdefs, 0);
        nd = Py_SIZE(argdefs);
    }
    else {
        d = NULL;
        nd = 0;
    }
#if PY_MAJOR_VERSION >= 3
    result = PyEval_EvalCodeEx((PyObject*)co, globals, (PyObject *)NULL,
                               args, (int)nargs,
                               k, (int)nk,
                               d, (int)nd, kwdefs, closure);
#else
    result = PyEval_EvalCodeEx(co, globals, (PyObject *)NULL,
                               args, (int)nargs,
                               k, (int)nk,
                               d, (int)nd, closure);
#endif
    Py_XDECREF(kwtuple);
done:
    Py_LeaveRecursiveCall();
    return result;
}
#endif

/* PyObjectCallMethO */
#if CYTHON_COMPILING_IN_CPYTHON
static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg) {
    PyObject *self, *result;
    PyCFunction cfunc;
    cfunc = __Pyx_CyOrPyCFunction_GET_FUNCTION(func);
    self = __Pyx_CyOrPyCFunction_GET_SELF(func);
    #if PY_MAJOR_VERSION < 3
    if (unlikely(Py_EnterRecursiveCall((char*)" while calling a Python object")))
        return NULL;
    #else
    if (unlikely(Py_EnterRecursiveCall(" while calling a Python object")))
        return NULL;
    #endif
    result = cfunc(self, arg);
    Py_LeaveRecursiveCall();
    if (unlikely(!result) && unlikely(!PyErr_Occurred())) {
        PyErr_SetString(
            PyExc_SystemError,
            "NULL result without error in PyObject_Call");
    }
    return result;
}
#endif

/* PyObjectFastCall */
#if PY_VERSION_HEX < 0x03090000 || CYTHON_COMPILING_IN_LIMITED_API
static PyObject* __Pyx_PyObject_FastCall_fallback(PyObject *func, PyObject **args, size_t nargs, PyObject *kwargs) {
    PyObject *argstuple;
    PyObject *result = 0;
    size_t i;
    argstuple = PyTuple_New((Py_ssize_t)nargs);
    if (unlikely(!argstuple)) return NULL;
    for (i = 0; i < nargs; i++) {
        Py_INCREF(args[i]);
        if (__Pyx_PyTuple_SET_ITEM(argstuple, (Py_ssize_t)i, args[i]) < 0) goto bad;
    }
    result = __Pyx_PyObject_Call(func, argstuple, kwargs);
  bad:
    Py_DECREF(argstuple);
    return result;
}
#endif
static CYTHON_INLINE PyObject* __Pyx_PyObject_FastCallDict(PyObject *func, PyObject **args, size_t _nargs, PyObject *kwargs) {
    Py_ssize_t nargs = __Pyx_PyVectorcall_NARGS(_nargs);
#if CYTHON_COMPILING_IN_CPYTHON
    if (nargs == 0 && kwargs == NULL) {
        if (__Pyx_CyOrPyCFunction_Check(func) && likely( __Pyx_CyOrPyCFunction_GET_FLAGS(func) & METH_NOARGS))
            return __Pyx_PyObject_CallMethO(func, NULL);
    }
    else if (nargs == 1 && kwargs == NULL) {
        if (__Pyx_CyOrPyCFunction_Check(func) && likely( __Pyx_CyOrPyCFunction_GET_FLAGS(func) & METH_O))
            return __Pyx_PyObject_CallMethO(func, args[0]);
    }
#endif
    #if PY_VERSION_HEX < 0x030800B1
    #if CYTHON_FAST_PYCCALL
    if (PyCFunction_Check(func)) {
        if (kwargs) {
            return _PyCFunction_FastCallDict(func, args, nargs, kwargs);
        } else {
            return _PyCFunction_FastCallKeywords(func, args, nargs, NULL);
        }
    }
    #if PY_VERSION_HEX >= 0x030700A1
    if (!kwargs && __Pyx_IS_TYPE(func, &PyMethodDescr_Type)) {
        return _PyMethodDescr_FastCallKeywords(func, args, nargs, NULL);
    }
    #endif
    #endif
    #if CYTHON_FAST_PYCALL
    if (PyFunction_Check(func)) {
        return __Pyx_PyFunction_FastCallDict(func, args, nargs, kwargs);
    }
    #endif
    #endif
    if (kwargs == NULL) {
        #if CYTHON_VECTORCALL
        #if PY_VERSION_HEX < 0x03090000
        vectorcallfunc f = _PyVectorcall_Function(func);
        #else
        vectorcallfunc f = PyVectorcall_Function(func);
        #endif
        if (f) {
            return f(func, args, (size_t)nargs, NULL);
        }
        #elif defined(__Pyx_CyFunction_USED) && CYTHON_BACKPORT_VECTORCALL
        if (__Pyx_CyFunction_CheckExact(func)) {
            __pyx_vectorcallfunc f = __Pyx_CyFunction_func_vectorcall(func);
            if (f) return f(func, args, (size_t)nargs, NULL);
        }
        #endif
    }
    if (nargs == 0) {
        return __Pyx_PyObject_Call(func, __pyx_empty_tuple, kwargs);
    }
    #if PY_VERSION_HEX >= 0x03090000 && !CYTHON_COMPILING_IN_LIMITED_API
    return PyObject_VectorcallDict(func, args, (size_t)nargs, kwargs);
    #else
    return __Pyx_PyObject_FastCall_fallback(func, args, (size_t)nargs, kwargs);
    #endif
}

/* PyObjectCallNoArg */
static CYTHON_INLINE PyObject* __Pyx_PyObject_CallNoArg(PyObject *func) {
    PyObject *arg[2] = {NULL, NULL};
    return __Pyx_PyObject_FastCall(func, arg + 1, 0 | __Pyx_PY_VECTORCALL_ARGUMENTS_OFFSET);
}

/* PyObjectCallOneArg */
static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) {
    PyObject *args[2] = {NULL, arg};
    return __Pyx_PyObject_FastCall(func, args+1, 1 | __Pyx_PY_VECTORCALL_ARGUMENTS_OFFSET);
}

/* PyObjectGetMethod */
static int __Pyx_PyObject_GetMethod(PyObject *obj, PyObject *name, PyObject **method) {
    PyObject *attr;
#if CYTHON_UNPACK_METHODS && CYTHON_COMPILING_IN_CPYTHON && CYTHON_USE_PYTYPE_LOOKUP
    __Pyx_TypeName type_name;
    PyTypeObject *tp = Py_TYPE(obj);
    PyObject *descr;
    descrgetfunc f = NULL;
    PyObject **dictptr, *dict;
    int meth_found = 0;
    assert (*method == NULL);
    if (unlikely(tp->tp_getattro != PyObject_GenericGetAttr)) {
        attr = __Pyx_PyObject_GetAttrStr(obj, name);
        goto try_unpack;
    }
    if (unlikely(tp->tp_dict == NULL) && unlikely(PyType_Ready(tp) < 0)) {
        return 0;
    }
    descr = _PyType_Lookup(tp, name);
    if (likely(descr != NULL)) {
        Py_INCREF(descr);
#if defined(Py_TPFLAGS_METHOD_DESCRIPTOR) && Py_TPFLAGS_METHOD_DESCRIPTOR
        if (__Pyx_PyType_HasFeature(Py_TYPE(descr), Py_TPFLAGS_METHOD_DESCRIPTOR))
#elif PY_MAJOR_VERSION >= 3
        #ifdef __Pyx_CyFunction_USED
        if (likely(PyFunction_Check(descr) || __Pyx_IS_TYPE(descr, &PyMethodDescr_Type) || __Pyx_CyFunction_Check(descr)))
        #else
        if (likely(PyFunction_Check(descr) || __Pyx_IS_TYPE(descr, &PyMethodDescr_Type)))
        #endif
#else
        #ifdef __Pyx_CyFunction_USED
        if (likely(PyFunction_Check(descr) || __Pyx_CyFunction_Check(descr)))
        #else
        if (likely(PyFunction_Check(descr)))
        #endif
#endif
        {
            meth_found = 1;
        } else {
            f = Py_TYPE(descr)->tp_descr_get;
            if (f != NULL && PyDescr_IsData(descr)) {
                attr = f(descr, obj, (PyObject *)Py_TYPE(obj));
                Py_DECREF(descr);
                goto try_unpack;
            }
        }
    }
    dictptr = _PyObject_GetDictPtr(obj);
    if (dictptr != NULL && (dict = *dictptr) != NULL) {
        Py_INCREF(dict);
        attr = __Pyx_PyDict_GetItemStr(dict, name);
        if (attr != NULL) {
            Py_INCREF(attr);
            Py_DECREF(dict);
            Py_XDECREF(descr);
            goto try_unpack;
        }
        Py_DECREF(dict);
    }
    if (meth_found) {
        *method = descr;
        return 1;
    }
    if (f != NULL) {
        attr = f(descr, obj, (PyObject *)Py_TYPE(obj));
        Py_DECREF(descr);
        goto try_unpack;
    }
    if (likely(descr != NULL)) {
        *method = descr;
        return 0;
    }
    type_name = __Pyx_PyType_GetName(tp);
    PyErr_Format(PyExc_AttributeError,
#if PY_MAJOR_VERSION >= 3
                 "'" __Pyx_FMT_TYPENAME "' object has no attribute '%U'",
                 type_name, name);
#else
                 "'" __Pyx_FMT_TYPENAME "' object has no attribute '%.400s'",
                 type_name, PyString_AS_STRING(name));
#endif
    __Pyx_DECREF_TypeName(type_name);
    return 0;
#else
    attr = __Pyx_PyObject_GetAttrStr(obj, name);
    goto try_unpack;
#endif
try_unpack:
#if CYTHON_UNPACK_METHODS
    if (likely(attr) && PyMethod_Check(attr) && likely(PyMethod_GET_SELF(attr) == obj)) {
        PyObject *function = PyMethod_GET_FUNCTION(attr);
        Py_INCREF(function);
        Py_DECREF(attr);
        *method = function;
        return 1;
    }
#endif
    *method = attr;
    return 0;
}

/* PyObjectCallMethod0 */
static PyObject* __Pyx_PyObject_CallMethod0(PyObject* obj, PyObject* method_name) {
    PyObject *method = NULL, *result = NULL;
    int is_method = __Pyx_PyObject_GetMethod(obj, method_name, &method);
    if (likely(is_method)) {
        result = __Pyx_PyObject_CallOneArg(method, obj);
        Py_DECREF(method);
        return result;
    }
    if (unlikely(!method)) goto bad;
    result = __Pyx_PyObject_CallNoArg(method);
    Py_DECREF(method);
bad:
    return result;
}

/* ValidateBasesTuple */
#if CYTHON_COMPILING_IN_CPYTHON || CYTHON_COMPILING_IN_LIMITED_API || CYTHON_USE_TYPE_SPECS
static int __Pyx_validate_bases_tuple(const char *type_name, Py_ssize_t dictoffset, PyObject *bases) {
    Py_ssize_t i, n;
#if CYTHON_ASSUME_SAFE_MACROS
    n = PyTuple_GET_SIZE(bases);
#else
    n = PyTuple_Size(bases);
    if (n < 0) return -1;
#endif
    for (i = 1; i < n; i++)
    {
#if CYTHON_AVOID_BORROWED_REFS
        PyObject *b0 = PySequence_GetItem(bases, i);
        if (!b0) return -1;
#elif CYTHON_ASSUME_SAFE_MACROS
        PyObject *b0 = PyTuple_GET_ITEM(bases, i);
#else
        PyObject *b0 = PyTuple_GetItem(bases, i);
        if (!b0) return -1;
#endif
        PyTypeObject *b;
#if PY_MAJOR_VERSION < 3
        if (PyClass_Check(b0))
        {
            PyErr_Format(PyExc_TypeError, "base class '%.200s' is an old-style class",
                         PyString_AS_STRING(((PyClassObject*)b0)->cl_name));
#if CYTHON_AVOID_BORROWED_REFS
            Py_DECREF(b0);
#endif
            return -1;
        }
#endif
        b = (PyTypeObject*) b0;
        if (!__Pyx_PyType_HasFeature(b, Py_TPFLAGS_HEAPTYPE))
        {
            __Pyx_TypeName b_name = __Pyx_PyType_GetName(b);
            PyErr_Format(PyExc_TypeError,
                "base class '" __Pyx_FMT_TYPENAME "' is not a heap type", b_name);
            __Pyx_DECREF_TypeName(b_name);
#if CYTHON_AVOID_BORROWED_REFS
            Py_DECREF(b0);
#endif
            return -1;
        }
        if (dictoffset == 0)
        {
            Py_ssize_t b_dictoffset = 0;
#if CYTHON_USE_TYPE_SLOTS || CYTHON_COMPILING_IN_PYPY
            b_dictoffset = b->tp_dictoffset;
#else
            PyObject *py_b_dictoffset = PyObject_GetAttrString((PyObject*)b, "__dictoffset__");
            if (!py_b_dictoffset) goto dictoffset_return;
            b_dictoffset = PyLong_AsSsize_t(py_b_dictoffset);
            Py_DECREF(py_b_dictoffset);
            if (b_dictoffset == -1 && PyErr_Occurred()) goto dictoffset_return;
#endif
            if (b_dictoffset) {
                {
                    __Pyx_TypeName b_name = __Pyx_PyType_GetName(b);
                    PyErr_Format(PyExc_TypeError,
                        "extension type '%.200s' has no __dict__ slot, "
                        "but base type '" __Pyx_FMT_TYPENAME "' has: "
                        "either add 'cdef dict __dict__' to the extension type "
                        "or add '__slots__ = [...]' to the base type",
                        type_name, b_name);
                    __Pyx_DECREF_TypeName(b_name);
                }
#if !(CYTHON_USE_TYPE_SLOTS || CYTHON_COMPILING_IN_PYPY)
              dictoffset_return:
#endif
#if CYTHON_AVOID_BORROWED_REFS
                Py_DECREF(b0);
#endif
                return -1;
            }
        }
#if CYTHON_AVOID_BORROWED_REFS
        Py_DECREF(b0);
#endif
    }
    return 0;
}
#endif

/* PyType_Ready */
static int __Pyx_PyType_Ready(PyTypeObject *t) {
#if CYTHON_USE_TYPE_SPECS || !(CYTHON_COMPILING_IN_CPYTHON || CYTHON_COMPILING_IN_LIMITED_API) || defined(PYSTON_MAJOR_VERSION)
    (void)__Pyx_PyObject_CallMethod0;
#if CYTHON_USE_TYPE_SPECS
    (void)__Pyx_validate_bases_tuple;
#endif
    return PyType_Ready(t);
#else
    int r;
    PyObject *bases = __Pyx_PyType_GetSlot(t, tp_bases, PyObject*);
    if (bases && unlikely(__Pyx_validate_bases_tuple(t->tp_name, t->tp_dictoffset, bases) == -1))
        return -1;
#if PY_VERSION_HEX >= 0x03050000 && !defined(PYSTON_MAJOR_VERSION)
    {
        int gc_was_enabled;
    #if PY_VERSION_HEX >= 0x030A00b1
        gc_was_enabled = PyGC_Disable();
        (void)__Pyx_PyObject_CallMethod0;
    #else
        PyObject *ret, *py_status;
        PyObject *gc = NULL;
        #if PY_VERSION_HEX >= 0x030700a1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM+0 >= 0x07030400)
        gc = PyImport_GetModule(__pyx_kp_u_gc);
        #endif
        if (unlikely(!gc)) gc = PyImport_Import(__pyx_kp_u_gc);
        if (unlikely(!gc)) return -1;
        py_status = __Pyx_PyObject_CallMethod0(gc, __pyx_kp_u_isenabled);
        if (unlikely(!py_status)) {
            Py_DECREF(gc);
            return -1;
        }
        gc_was_enabled = __Pyx_PyObject_IsTrue(py_status);
        Py_DECREF(py_status);
        if (gc_was_enabled > 0) {
            ret = __Pyx_PyObject_CallMethod0(gc, __pyx_kp_u_disable);
            if (unlikely(!ret)) {
                Py_DECREF(gc);
                return -1;
            }
            Py_DECREF(ret);
        } else if (unlikely(gc_was_enabled == -1)) {
            Py_DECREF(gc);
            return -1;
        }
    #endif
        t->tp_flags |= Py_TPFLAGS_HEAPTYPE;
#if PY_VERSION_HEX >= 0x030A0000
        t->tp_flags |= Py_TPFLAGS_IMMUTABLETYPE;
#endif
#else
        (void)__Pyx_PyObject_CallMethod0;
#endif
    r = PyType_Ready(t);
#if PY_VERSION_HEX >= 0x03050000 && !defined(PYSTON_MAJOR_VERSION)
        t->tp_flags &= ~Py_TPFLAGS_HEAPTYPE;
    #if PY_VERSION_HEX >= 0x030A00b1
        if (gc_was_enabled)
            PyGC_Enable();
    #else
        if (gc_was_enabled) {
            PyObject *tp, *v, *tb;
            PyErr_Fetch(&tp, &v, &tb);
            ret = __Pyx_PyObject_CallMethod0(gc, __pyx_kp_u_enable);
            if (likely(ret || r == -1)) {
                Py_XDECREF(ret);
                PyErr_Restore(tp, v, tb);
            } else {
                Py_XDECREF(tp);
                Py_XDECREF(v);
                Py_XDECREF(tb);
                r = -1;
            }
        }
        Py_DECREF(gc);
    #endif
    }
#endif
    return r;
#endif
}

/* PyObject_GenericGetAttrNoDict */
#if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000
static PyObject *__Pyx_RaiseGenericGetAttributeError(PyTypeObject *tp, PyObject *attr_name) {
    __Pyx_TypeName type_name = __Pyx_PyType_GetName(tp);
    PyErr_Format(PyExc_AttributeError,
#if PY_MAJOR_VERSION >= 3
                 "'" __Pyx_FMT_TYPENAME "' object has no attribute '%U'",
                 type_name, attr_name);
#else
                 "'" __Pyx_FMT_TYPENAME "' object has no attribute '%.400s'",
                 type_name, PyString_AS_STRING(attr_name));
#endif
    __Pyx_DECREF_TypeName(type_name);
    return NULL;
}
static CYTHON_INLINE PyObject* __Pyx_PyObject_GenericGetAttrNoDict(PyObject* obj, PyObject* attr_name) {
    PyObject *descr;
    PyTypeObject *tp = Py_TYPE(obj);
    if (unlikely(!PyString_Check(attr_name))) {
        return PyObject_GenericGetAttr(obj, attr_name);
    }
    assert(!tp->tp_dictoffset);
    descr = _PyType_Lookup(tp, attr_name);
    if (unlikely(!descr)) {
        return __Pyx_RaiseGenericGetAttributeError(tp, attr_name);
    }
    Py_INCREF(descr);
    #if PY_MAJOR_VERSION < 3
    if (likely(PyType_HasFeature(Py_TYPE(descr), Py_TPFLAGS_HAVE_CLASS)))
    #endif
    {
        descrgetfunc f = Py_TYPE(descr)->tp_descr_get;
        if (unlikely(f)) {
            PyObject *res = f(descr, obj, (PyObject *)tp);
            Py_DECREF(descr);
            return res;
        }
    }
    return descr;
}
#endif

/* PyObject_GenericGetAttr */
#if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000
static PyObject* __Pyx_PyObject_GenericGetAttr(PyObject* obj, PyObject* attr_name) {
    if (unlikely(Py_TYPE(obj)->tp_dictoffset)) {
        return PyObject_GenericGetAttr(obj, attr_name);
    }
    return __Pyx_PyObject_GenericGetAttrNoDict(obj, attr_name);
}
#endif

/* SetupReduce */
#if !CYTHON_COMPILING_IN_LIMITED_API
static int __Pyx_setup_reduce_is_named(PyObject* meth, PyObject* name) {
  int ret;
  PyObject *name_attr;
  name_attr = __Pyx_PyObject_GetAttrStrNoError(meth, __pyx_n_s_name);
  if (likely(name_attr)) {
      ret = PyObject_RichCompareBool(name_attr, name, Py_EQ);
  } else {
      ret = -1;
  }
  if (unlikely(ret < 0)) {
      PyErr_Clear();
      ret = 0;
  }
  Py_XDECREF(name_attr);
  return ret;
}
static int __Pyx_setup_reduce(PyObject* type_obj) {
    int ret = 0;
    PyObject *object_reduce = NULL;
    PyObject *object_getstate = NULL;
    PyObject *object_reduce_ex = NULL;
    PyObject *reduce = NULL;
    PyObject *reduce_ex = NULL;
    PyObject *reduce_cython = NULL;
    PyObject *setstate = NULL;
    PyObject *setstate_cython = NULL;
    PyObject *getstate = NULL;
#if CYTHON_USE_PYTYPE_LOOKUP
    getstate = _PyType_Lookup((PyTypeObject*)type_obj, __pyx_n_s_getstate);
#else
    getstate = __Pyx_PyObject_GetAttrStrNoError(type_obj, __pyx_n_s_getstate);
    if (!getstate && PyErr_Occurred()) {
        goto __PYX_BAD;
    }
#endif
    if (getstate) {
#if CYTHON_USE_PYTYPE_LOOKUP
        object_getstate = _PyType_Lookup(&PyBaseObject_Type, __pyx_n_s_getstate);
#else
        object_getstate = __Pyx_PyObject_GetAttrStrNoError((PyObject*)&PyBaseObject_Type, __pyx_n_s_getstate);
        if (!object_getstate && PyErr_Occurred()) {
            goto __PYX_BAD;
        }
#endif
        if (object_getstate != getstate) {
            goto __PYX_GOOD;
        }
    }
#if CYTHON_USE_PYTYPE_LOOKUP
    object_reduce_ex = _PyType_Lookup(&PyBaseObject_Type, __pyx_n_s_reduce_ex); if (!object_reduce_ex) goto __PYX_BAD;
#else
    object_reduce_ex = __Pyx_PyObject_GetAttrStr((PyObject*)&PyBaseObject_Type, __pyx_n_s_reduce_ex); if (!object_reduce_ex) goto __PYX_BAD;
#endif
    reduce_ex = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_reduce_ex); if (unlikely(!reduce_ex)) goto __PYX_BAD;
    if (reduce_ex == object_reduce_ex) {
#if CYTHON_USE_PYTYPE_LOOKUP
        object_reduce = _PyType_Lookup(&PyBaseObject_Type, __pyx_n_s_reduce); if (!object_reduce) goto __PYX_BAD;
#else
        object_reduce = __Pyx_PyObject_GetAttrStr((PyObject*)&PyBaseObject_Type, __pyx_n_s_reduce); if (!object_reduce) goto __PYX_BAD;
#endif
        reduce = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_reduce); if (unlikely(!reduce)) goto __PYX_BAD;
        if (reduce == object_reduce || __Pyx_setup_reduce_is_named(reduce, __pyx_n_s_reduce_cython)) {
            reduce_cython = __Pyx_PyObject_GetAttrStrNoError(type_obj, __pyx_n_s_reduce_cython);
            if (likely(reduce_cython)) {
                ret = PyDict_SetItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_reduce, reduce_cython); if (unlikely(ret < 0)) goto __PYX_BAD;
                ret = PyDict_DelItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_reduce_cython); if (unlikely(ret < 0)) goto __PYX_BAD;
            } else if (reduce == object_reduce || PyErr_Occurred()) {
                goto __PYX_BAD;
            }
            setstate = __Pyx_PyObject_GetAttrStrNoError(type_obj, __pyx_n_s_setstate);
            if (!setstate) PyErr_Clear();
            if (!setstate || __Pyx_setup_reduce_is_named(setstate, __pyx_n_s_setstate_cython)) {
                setstate_cython = __Pyx_PyObject_GetAttrStrNoError(type_obj, __pyx_n_s_setstate_cython);
                if (likely(setstate_cython)) {
                    ret = PyDict_SetItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_setstate, setstate_cython); if (unlikely(ret < 0)) goto __PYX_BAD;
                    ret = PyDict_DelItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_setstate_cython); if (unlikely(ret < 0)) goto __PYX_BAD;
                } else if (!setstate || PyErr_Occurred()) {
                    goto __PYX_BAD;
                }
            }
            PyType_Modified((PyTypeObject*)type_obj);
        }
    }
    goto __PYX_GOOD;
__PYX_BAD:
    if (!PyErr_Occurred()) {
        __Pyx_TypeName type_obj_name =
            __Pyx_PyType_GetName((PyTypeObject*)type_obj);
        PyErr_Format(PyExc_RuntimeError,
            "Unable to initialize pickling for " __Pyx_FMT_TYPENAME, type_obj_name);
        __Pyx_DECREF_TypeName(type_obj_name);
    }
    ret = -1;
__PYX_GOOD:
#if !CYTHON_USE_PYTYPE_LOOKUP
    Py_XDECREF(object_reduce);
    Py_XDECREF(object_reduce_ex);
    Py_XDECREF(object_getstate);
    Py_XDECREF(getstate);
#endif
    Py_XDECREF(reduce);
    Py_XDECREF(reduce_ex);
    Py_XDECREF(reduce_cython);
    Py_XDECREF(setstate);
    Py_XDECREF(setstate_cython);
    return ret;
}
#endif

/* TypeImport */
#ifndef __PYX_HAVE_RT_ImportType_3_0_10
#define __PYX_HAVE_RT_ImportType_3_0_10
static PyTypeObject *__Pyx_ImportType_3_0_10(PyObject *module, const char *module_name, const char *class_name,
    size_t size, size_t alignment, enum __Pyx_ImportType_CheckSize_3_0_10 check_size)
{
    PyObject *result = 0;
    char warning[200];
    Py_ssize_t basicsize;
    Py_ssize_t itemsize;
#if CYTHON_COMPILING_IN_LIMITED_API
    PyObject *py_basicsize;
    PyObject *py_itemsize;
#endif
    result = PyObject_GetAttrString(module, class_name);
    if (!result)
        goto bad;
    if (!PyType_Check(result)) {
        PyErr_Format(PyExc_TypeError,
            "%.200s.%.200s is not a type object",
            module_name, class_name);
        goto bad;
    }
#if !CYTHON_COMPILING_IN_LIMITED_API
    basicsize = ((PyTypeObject *)result)->tp_basicsize;
    itemsize = ((PyTypeObject *)result)->tp_itemsize;
#else
    py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
    if (!py_basicsize)
        goto bad;
    basicsize = PyLong_AsSsize_t(py_basicsize);
    Py_DECREF(py_basicsize);
    py_basicsize = 0;
    if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
        goto bad;
    py_itemsize = PyObject_GetAttrString(result, "__itemsize__");
    if (!py_itemsize)
        goto bad;
    itemsize = PyLong_AsSsize_t(py_itemsize);
    Py_DECREF(py_itemsize);
    py_itemsize = 0;
    if (itemsize == (Py_ssize_t)-1 && PyErr_Occurred())
        goto bad;
#endif
    if (itemsize) {
        if (size % alignment) {
            alignment = size % alignment;
        }
        if (itemsize < (Py_ssize_t)alignment)
            itemsize = (Py_ssize_t)alignment;
    }
    if ((size_t)(basicsize + itemsize) < size) {
        PyErr_Format(PyExc_ValueError,
            "%.200s.%.200s size changed, may indicate binary incompatibility. "
            "Expected %zd from C header, got %zd from PyObject",
            module_name, class_name, size, basicsize+itemsize);
        goto bad;
    }
    if (check_size == __Pyx_ImportType_CheckSize_Error_3_0_10 &&
            ((size_t)basicsize > size || (size_t)(basicsize + itemsize) < size)) {
        PyErr_Format(PyExc_ValueError,
            "%.200s.%.200s size changed, may indicate binary incompatibility. "
            "Expected %zd from C header, got %zd-%zd from PyObject",
            module_name, class_name, size, basicsize, basicsize+itemsize);
        goto bad;
    }
    else if (check_size == __Pyx_ImportType_CheckSize_Warn_3_0_10 && (size_t)basicsize > size) {
        PyOS_snprintf(warning, sizeof(warning),
            "%s.%s size changed, may indicate binary incompatibility. "
            "Expected %zd from C header, got %zd from PyObject",
            module_name, class_name, size, basicsize);
        if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
    }
    return (PyTypeObject *)result;
bad:
    Py_XDECREF(result);
    return NULL;
}
#endif

/* GetVTable */
static void* __Pyx_GetVtable(PyTypeObject *type) {
    void* ptr;
#if CYTHON_COMPILING_IN_LIMITED_API
    PyObject *ob = PyObject_GetAttr((PyObject *)type, __pyx_n_s_pyx_vtable);
#else
    PyObject *ob = PyObject_GetItem(type->tp_dict, __pyx_n_s_pyx_vtable);
#endif
    if (!ob)
        goto bad;
    ptr = PyCapsule_GetPointer(ob, 0);
    if (!ptr && !PyErr_Occurred())
        PyErr_SetString(PyExc_RuntimeError, "invalid vtable found for imported type");
    Py_DECREF(ob);
    return ptr;
bad:
    Py_XDECREF(ob);
    return NULL;
}

/* Import */
static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) {
    PyObject *module = 0;
    PyObject *empty_dict = 0;
    PyObject *empty_list = 0;
    #if PY_MAJOR_VERSION < 3
    PyObject *py_import;
    py_import = __Pyx_PyObject_GetAttrStr(__pyx_b, __pyx_n_s_import);
    if (unlikely(!py_import))
        goto bad;
    if (!from_list) {
        empty_list = PyList_New(0);
        if (unlikely(!empty_list))
            goto bad;
        from_list = empty_list;
    }
    #endif
    empty_dict = PyDict_New();
    if (unlikely(!empty_dict))
        goto bad;
    {
        #if PY_MAJOR_VERSION >= 3
        if (level == -1) {
            if (strchr(__Pyx_MODULE_NAME, '.') != NULL) {
                module = PyImport_ImportModuleLevelObject(
                    name, __pyx_d, empty_dict, from_list, 1);
                if (unlikely(!module)) {
                    if (unlikely(!PyErr_ExceptionMatches(PyExc_ImportError)))
                        goto bad;
                    PyErr_Clear();
                }
            }
            level = 0;
        }
        #endif
        if (!module) {
            #if PY_MAJOR_VERSION < 3
            PyObject *py_level = PyInt_FromLong(level);
            if (unlikely(!py_level))
                goto bad;
            module = PyObject_CallFunctionObjArgs(py_import,
                name, __pyx_d, empty_dict, from_list, py_level, (PyObject *)NULL);
            Py_DECREF(py_level);
            #else
            module = PyImport_ImportModuleLevelObject(
                name, __pyx_d, empty_dict, from_list, level);
            #endif
        }
    }
bad:
    Py_XDECREF(empty_dict);
    Py_XDECREF(empty_list);
    #if PY_MAJOR_VERSION < 3
    Py_XDECREF(py_import);
    #endif
    return module;
}

/* ImportFrom */
static PyObject* __Pyx_ImportFrom(PyObject* module, PyObject* name) {
    PyObject* value = __Pyx_PyObject_GetAttrStr(module, name);
    if (unlikely(!value) && PyErr_ExceptionMatches(PyExc_AttributeError)) {
        const char* module_name_str = 0;
        PyObject* module_name = 0;
        PyObject* module_dot = 0;
        PyObject* full_name = 0;
        PyErr_Clear();
        module_name_str = PyModule_GetName(module);
        if (unlikely(!module_name_str)) { goto modbad; }
        module_name = PyUnicode_FromString(module_name_str);
        if (unlikely(!module_name)) { goto modbad; }
        module_dot = PyUnicode_Concat(module_name, __pyx_kp_u__4);
        if (unlikely(!module_dot)) { goto modbad; }
        full_name = PyUnicode_Concat(module_dot, name);
        if (unlikely(!full_name)) { goto modbad; }
        #if PY_VERSION_HEX < 0x030700A1 || (CYTHON_COMPILING_IN_PYPY && PYPY_VERSION_NUM  < 0x07030400)
        {
            PyObject *modules = PyImport_GetModuleDict();
            if (unlikely(!modules))
                goto modbad;
            value = PyObject_GetItem(modules, full_name);
        }
        #else
        value = PyImport_GetModule(full_name);
        #endif
      modbad:
        Py_XDECREF(full_name);
        Py_XDECREF(module_dot);
        Py_XDECREF(module_name);
    }
    if (unlikely(!value)) {
        PyErr_Format(PyExc_ImportError,
        #if PY_MAJOR_VERSION < 3
            "cannot import name %.230s", PyString_AS_STRING(name));
        #else
            "cannot import name %S", name);
        #endif
    }
    return value;
}

/* FetchSharedCythonModule */
static PyObject *__Pyx_FetchSharedCythonABIModule(void) {
    return __Pyx_PyImport_AddModuleRef((char*) __PYX_ABI_MODULE_NAME);
}

/* FetchCommonType */
static int __Pyx_VerifyCachedType(PyObject *cached_type,
                               const char *name,
                               Py_ssize_t basicsize,
                               Py_ssize_t expected_basicsize) {
    if (!PyType_Check(cached_type)) {
        PyErr_Format(PyExc_TypeError,
            "Shared Cython type %.200s is not a type object", name);
        return -1;
    }
    if (basicsize != expected_basicsize) {
        PyErr_Format(PyExc_TypeError,
            "Shared Cython type %.200s has the wrong size, try recompiling",
            name);
        return -1;
    }
    return 0;
}
#if !CYTHON_USE_TYPE_SPECS
static PyTypeObject* __Pyx_FetchCommonType(PyTypeObject* type) {
    PyObject* abi_module;
    const char* object_name;
    PyTypeObject *cached_type = NULL;
    abi_module = __Pyx_FetchSharedCythonABIModule();
    if (!abi_module) return NULL;
    object_name = strrchr(type->tp_name, '.');
    object_name = object_name ? object_name+1 : type->tp_name;
    cached_type = (PyTypeObject*) PyObject_GetAttrString(abi_module, object_name);
    if (cached_type) {
        if (__Pyx_VerifyCachedType(
              (PyObject *)cached_type,
              object_name,
              cached_type->tp_basicsize,
              type->tp_basicsize) < 0) {
            goto bad;
        }
        goto done;
    }
    if (!PyErr_ExceptionMatches(PyExc_AttributeError)) goto bad;
    PyErr_Clear();
    if (PyType_Ready(type) < 0) goto bad;
    if (PyObject_SetAttrString(abi_module, object_name, (PyObject *)type) < 0)
        goto bad;
    Py_INCREF(type);
    cached_type = type;
done:
    Py_DECREF(abi_module);
    return cached_type;
bad:
    Py_XDECREF(cached_type);
    cached_type = NULL;
    goto done;
}
#else
static PyTypeObject *__Pyx_FetchCommonTypeFromSpec(PyObject *module, PyType_Spec *spec, PyObject *bases) {
    PyObject *abi_module, *cached_type = NULL;
    const char* object_name = strrchr(spec->name, '.');
    object_name = object_name ? object_name+1 : spec->name;
    abi_module = __Pyx_FetchSharedCythonABIModule();
    if (!abi_module) return NULL;
    cached_type = PyObject_GetAttrString(abi_module, object_name);
    if (cached_type) {
        Py_ssize_t basicsize;
#if CYTHON_COMPILING_IN_LIMITED_API
        PyObject *py_basicsize;
        py_basicsize = PyObject_GetAttrString(cached_type, "__basicsize__");
        if (unlikely(!py_basicsize)) goto bad;
        basicsize = PyLong_AsSsize_t(py_basicsize);
        Py_DECREF(py_basicsize);
        py_basicsize = 0;
        if (unlikely(basicsize == (Py_ssize_t)-1) && PyErr_Occurred()) goto bad;
#else
        basicsize = likely(PyType_Check(cached_type)) ? ((PyTypeObject*) cached_type)->tp_basicsize : -1;
#endif
        if (__Pyx_VerifyCachedType(
              cached_type,
              object_name,
              basicsize,
              spec->basicsize) < 0) {
            goto bad;
        }
        goto done;
    }
    if (!PyErr_ExceptionMatches(PyExc_AttributeError)) goto bad;
    PyErr_Clear();
    CYTHON_UNUSED_VAR(module);
    cached_type = __Pyx_PyType_FromModuleAndSpec(abi_module, spec, bases);
    if (unlikely(!cached_type)) goto bad;
    if (unlikely(__Pyx_fix_up_extension_type_from_spec(spec, (PyTypeObject *) cached_type) < 0)) goto bad;
    if (PyObject_SetAttrString(abi_module, object_name, cached_type) < 0) goto bad;
done:
    Py_DECREF(abi_module);
    assert(cached_type == NULL || PyType_Check(cached_type));
    return (PyTypeObject *) cached_type;
bad:
    Py_XDECREF(cached_type);
    cached_type = NULL;
    goto done;
}
#endif

/* PyVectorcallFastCallDict */
#if CYTHON_METH_FASTCALL
static PyObject *__Pyx_PyVectorcall_FastCallDict_kw(PyObject *func, __pyx_vectorcallfunc vc, PyObject *const *args, size_t nargs, PyObject *kw)
{
    PyObject *res = NULL;
    PyObject *kwnames;
    PyObject **newargs;
    PyObject **kwvalues;
    Py_ssize_t i, pos;
    size_t j;
    PyObject *key, *value;
    unsigned long keys_are_strings;
    Py_ssize_t nkw = PyDict_GET_SIZE(kw);
    newargs = (PyObject **)PyMem_Malloc((nargs + (size_t)nkw) * sizeof(args[0]));
    if (unlikely(newargs == NULL)) {
        PyErr_NoMemory();
        return NULL;
    }
    for (j = 0; j < nargs; j++) newargs[j] = args[j];
    kwnames = PyTuple_New(nkw);
    if (unlikely(kwnames == NULL)) {
        PyMem_Free(newargs);
        return NULL;
    }
    kwvalues = newargs + nargs;
    pos = i = 0;
    keys_are_strings = Py_TPFLAGS_UNICODE_SUBCLASS;
    while (PyDict_Next(kw, &pos, &key, &value)) {
        keys_are_strings &= Py_TYPE(key)->tp_flags;
        Py_INCREF(key);
        Py_INCREF(value);
        PyTuple_SET_ITEM(kwnames, i, key);
        kwvalues[i] = value;
        i++;
    }
    if (unlikely(!keys_are_strings)) {
        PyErr_SetString(PyExc_TypeError, "keywords must be strings");
        goto cleanup;
    }
    res = vc(func, newargs, nargs, kwnames);
cleanup:
    Py_DECREF(kwnames);
    for (i = 0; i < nkw; i++)
        Py_DECREF(kwvalues[i]);
    PyMem_Free(newargs);
    return res;
}
static CYTHON_INLINE PyObject *__Pyx_PyVectorcall_FastCallDict(PyObject *func, __pyx_vectorcallfunc vc, PyObject *const *args, size_t nargs, PyObject *kw)
{
    if (likely(kw == NULL) || PyDict_GET_SIZE(kw) == 0) {
        return vc(func, args, nargs, NULL);
    }
    return __Pyx_PyVectorcall_FastCallDict_kw(func, vc, args, nargs, kw);
}
#endif

/* CythonFunctionShared */
#if CYTHON_COMPILING_IN_LIMITED_API
static CYTHON_INLINE int __Pyx__IsSameCyOrCFunction(PyObject *func, void *cfunc) {
    if (__Pyx_CyFunction_Check(func)) {
        return PyCFunction_GetFunction(((__pyx_CyFunctionObject*)func)->func) == (PyCFunction) cfunc;
    } else if (PyCFunction_Check(func)) {
        return PyCFunction_GetFunction(func) == (PyCFunction) cfunc;
    }
    return 0;
}
#else
static CYTHON_INLINE int __Pyx__IsSameCyOrCFunction(PyObject *func, void *cfunc) {
    return __Pyx_CyOrPyCFunction_Check(func) && __Pyx_CyOrPyCFunction_GET_FUNCTION(func) == (PyCFunction) cfunc;
}
#endif
static CYTHON_INLINE void __Pyx__CyFunction_SetClassObj(__pyx_CyFunctionObject* f, PyObject* classobj) {
#if PY_VERSION_HEX < 0x030900B1 || CYTHON_COMPILING_IN_LIMITED_API
    __Pyx_Py_XDECREF_SET(
        __Pyx_CyFunction_GetClassObj(f),
            ((classobj) ? __Pyx_NewRef(classobj) : NULL));
#else
    __Pyx_Py_XDECREF_SET(
        ((PyCMethodObject *) (f))->mm_class,
        (PyTypeObject*)((classobj) ? __Pyx_NewRef(classobj) : NULL));
#endif
}
static PyObject *
__Pyx_CyFunction_get_doc(__pyx_CyFunctionObject *op, void *closure)
{
    CYTHON_UNUSED_VAR(closure);
    if (unlikely(op->func_doc == NULL)) {
#if CYTHON_COMPILING_IN_LIMITED_API
        op->func_doc = PyObject_GetAttrString(op->func, "__doc__");
        if (unlikely(!op->func_doc)) return NULL;
#else
        if (((PyCFunctionObject*)op)->m_ml->ml_doc) {
#if PY_MAJOR_VERSION >= 3
            op->func_doc = PyUnicode_FromString(((PyCFunctionObject*)op)->m_ml->ml_doc);
#else
            op->func_doc = PyString_FromString(((PyCFunctionObject*)op)->m_ml->ml_doc);
#endif
            if (unlikely(op->func_doc == NULL))
                return NULL;
        } else {
            Py_INCREF(Py_None);
            return Py_None;
        }
#endif
    }
    Py_INCREF(op->func_doc);
    return op->func_doc;
}
static int
__Pyx_CyFunction_set_doc(__pyx_CyFunctionObject *op, PyObject *value, void *context)
{
    CYTHON_UNUSED_VAR(context);
    if (value == NULL) {
        value = Py_None;
    }
    Py_INCREF(value);
    __Pyx_Py_XDECREF_SET(op->func_doc, value);
    return 0;
}
static PyObject *
__Pyx_CyFunction_get_name(__pyx_CyFunctionObject *op, void *context)
{
    CYTHON_UNUSED_VAR(context);
    if (unlikely(op->func_name == NULL)) {
#if CYTHON_COMPILING_IN_LIMITED_API
        op->func_name = PyObject_GetAttrString(op->func, "__name__");
#elif PY_MAJOR_VERSION >= 3
        op->func_name = PyUnicode_InternFromString(((PyCFunctionObject*)op)->m_ml->ml_name);
#else
        op->func_name = PyString_InternFromString(((PyCFunctionObject*)op)->m_ml->ml_name);
#endif
        if (unlikely(op->func_name == NULL))
            return NULL;
    }
    Py_INCREF(op->func_name);
    return op->func_name;
}
static int
__Pyx_CyFunction_set_name(__pyx_CyFunctionObject *op, PyObject *value, void *context)
{
    CYTHON_UNUSED_VAR(context);
#if PY_MAJOR_VERSION >= 3
    if (unlikely(value == NULL || !PyUnicode_Check(value)))
#else
    if (unlikely(value == NULL || !PyString_Check(value)))
#endif
    {
        PyErr_SetString(PyExc_TypeError,
                        "__name__ must be set to a string object");
        return -1;
    }
    Py_INCREF(value);
    __Pyx_Py_XDECREF_SET(op->func_name, value);
    return 0;
}
static PyObject *
__Pyx_CyFunction_get_qualname(__pyx_CyFunctionObject *op, void *context)
{
    CYTHON_UNUSED_VAR(context);
    Py_INCREF(op->func_qualname);
    return op->func_qualname;
}
static int
__Pyx_CyFunction_set_qualname(__pyx_CyFunctionObject *op, PyObject *value, void *context)
{
    CYTHON_UNUSED_VAR(context);
#if PY_MAJOR_VERSION >= 3
    if (unlikely(value == NULL || !PyUnicode_Check(value)))
#else
    if (unlikely(value == NULL || !PyString_Check(value)))
#endif
    {
        PyErr_SetString(PyExc_TypeError,
                        "__qualname__ must be set to a string object");
        return -1;
    }
    Py_INCREF(value);
    __Pyx_Py_XDECREF_SET(op->func_qualname, value);
    return 0;
}
static PyObject *
__Pyx_CyFunction_get_dict(__pyx_CyFunctionObject *op, void *context)
{
    CYTHON_UNUSED_VAR(context);
    if (unlikely(op->func_dict == NULL)) {
        op->func_dict = PyDict_New();
        if (unlikely(op->func_dict == NULL))
            return NULL;
    }
    Py_INCREF(op->func_dict);
    return op->func_dict;
}
static int
__Pyx_CyFunction_set_dict(__pyx_CyFunctionObject *op, PyObject *value, void *context)
{
    CYTHON_UNUSED_VAR(context);
    if (unlikely(value == NULL)) {
        PyErr_SetString(PyExc_TypeError,
               "function's dictionary may not be deleted");
        return -1;
    }
    if (unlikely(!PyDict_Check(value))) {
        PyErr_SetString(PyExc_TypeError,
               "setting function's dictionary to a non-dict");
        return -1;
    }
    Py_INCREF(value);
    __Pyx_Py_XDECREF_SET(op->func_dict, value);
    return 0;
}
static PyObject *
__Pyx_CyFunction_get_globals(__pyx_CyFunctionObject *op, void *context)
{
    CYTHON_UNUSED_VAR(context);
    Py_INCREF(op->func_globals);
    return op->func_globals;
}
static PyObject *
__Pyx_CyFunction_get_closure(__pyx_CyFunctionObject *op, void *context)
{
    CYTHON_UNUSED_VAR(op);
    CYTHON_UNUSED_VAR(context);
    Py_INCREF(Py_None);
    return Py_None;
}
static PyObject *
__Pyx_CyFunction_get_code(__pyx_CyFunctionObject *op, void *context)
{
    PyObject* result = (op->func_code) ? op->func_code : Py_None;
    CYTHON_UNUSED_VAR(context);
    Py_INCREF(result);
    return result;
}
static int
__Pyx_CyFunction_init_defaults(__pyx_CyFunctionObject *op) {
    int result = 0;
    PyObject *res = op->defaults_getter((PyObject *) op);
    if (unlikely(!res))
        return -1;
    #if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS
    op->defaults_tuple = PyTuple_GET_ITEM(res, 0);
    Py_INCREF(op->defaults_tuple);
    op->defaults_kwdict = PyTuple_GET_ITEM(res, 1);
    Py_INCREF(op->defaults_kwdict);
    #else
    op->defaults_tuple = __Pyx_PySequence_ITEM(res, 0);
    if (unlikely(!op->defaults_tuple)) result = -1;
    else {
        op->defaults_kwdict = __Pyx_PySequence_ITEM(res, 1);
        if (unlikely(!op->defaults_kwdict)) result = -1;
    }
    #endif
    Py_DECREF(res);
    return result;
}
static int
__Pyx_CyFunction_set_defaults(__pyx_CyFunctionObject *op, PyObject* value, void *context) {
    CYTHON_UNUSED_VAR(context);
    if (!value) {
        value = Py_None;
    } else if (unlikely(value != Py_None && !PyTuple_Check(value))) {
        PyErr_SetString(PyExc_TypeError,
                        "__defaults__ must be set to a tuple object");
        return -1;
    }
    PyErr_WarnEx(PyExc_RuntimeWarning, "changes to cyfunction.__defaults__ will not "
                 "currently affect the values used in function calls", 1);
    Py_INCREF(value);
    __Pyx_Py_XDECREF_SET(op->defaults_tuple, value);
    return 0;
}
static PyObject *
__Pyx_CyFunction_get_defaults(__pyx_CyFunctionObject *op, void *context) {
    PyObject* result = op->defaults_tuple;
    CYTHON_UNUSED_VAR(context);
    if (unlikely(!result)) {
        if (op->defaults_getter) {
            if (unlikely(__Pyx_CyFunction_init_defaults(op) < 0)) return NULL;
            result = op->defaults_tuple;
        } else {
            result = Py_None;
        }
    }
    Py_INCREF(result);
    return result;
}
static int
__Pyx_CyFunction_set_kwdefaults(__pyx_CyFunctionObject *op, PyObject* value, void *context) {
    CYTHON_UNUSED_VAR(context);
    if (!value) {
        value = Py_None;
    } else if (unlikely(value != Py_None && !PyDict_Check(value))) {
        PyErr_SetString(PyExc_TypeError,
                        "__kwdefaults__ must be set to a dict object");
        return -1;
    }
    PyErr_WarnEx(PyExc_RuntimeWarning, "changes to cyfunction.__kwdefaults__ will not "
                 "currently affect the values used in function calls", 1);
    Py_INCREF(value);
    __Pyx_Py_XDECREF_SET(op->defaults_kwdict, value);
    return 0;
}
static PyObject *
__Pyx_CyFunction_get_kwdefaults(__pyx_CyFunctionObject *op, void *context) {
    PyObject* result = op->defaults_kwdict;
    CYTHON_UNUSED_VAR(context);
    if (unlikely(!result)) {
        if (op->defaults_getter) {
            if (unlikely(__Pyx_CyFunction_init_defaults(op) < 0)) return NULL;
            result = op->defaults_kwdict;
        } else {
            result = Py_None;
        }
    }
    Py_INCREF(result);
    return result;
}
static int
__Pyx_CyFunction_set_annotations(__pyx_CyFunctionObject *op, PyObject* value, void *context) {
    CYTHON_UNUSED_VAR(context);
    if (!value || value == Py_None) {
        value = NULL;
    } else if (unlikely(!PyDict_Check(value))) {
        PyErr_SetString(PyExc_TypeError,
                        "__annotations__ must be set to a dict object");
        return -1;
    }
    Py_XINCREF(value);
    __Pyx_Py_XDECREF_SET(op->func_annotations, value);
    return 0;
}
static PyObject *
__Pyx_CyFunction_get_annotations(__pyx_CyFunctionObject *op, void *context) {
    PyObject* result = op->func_annotations;
    CYTHON_UNUSED_VAR(context);
    if (unlikely(!result)) {
        result = PyDict_New();
        if (unlikely(!result)) return NULL;
        op->func_annotations = result;
    }
    Py_INCREF(result);
    return result;
}
static PyObject *
__Pyx_CyFunction_get_is_coroutine(__pyx_CyFunctionObject *op, void *context) {
    int is_coroutine;
    CYTHON_UNUSED_VAR(context);
    if (op->func_is_coroutine) {
        return __Pyx_NewRef(op->func_is_coroutine);
    }
    is_coroutine = op->flags & __Pyx_CYFUNCTION_COROUTINE;
#if PY_VERSION_HEX >= 0x03050000
    if (is_coroutine) {
        PyObject *module, *fromlist, *marker = __pyx_n_s_is_coroutine;
        fromlist = PyList_New(1);
        if (unlikely(!fromlist)) return NULL;
        Py_INCREF(marker);
#if CYTHON_ASSUME_SAFE_MACROS
        PyList_SET_ITEM(fromlist, 0, marker);
#else
        if (unlikely(PyList_SetItem(fromlist, 0, marker) < 0)) {
            Py_DECREF(marker);
            Py_DECREF(fromlist);
            return NULL;
        }
#endif
        module = PyImport_ImportModuleLevelObject(__pyx_n_s_asyncio_coroutines, NULL, NULL, fromlist, 0);
        Py_DECREF(fromlist);
        if (unlikely(!module)) goto ignore;
        op->func_is_coroutine = __Pyx_PyObject_GetAttrStr(module, marker);
        Py_DECREF(module);
        if (likely(op->func_is_coroutine)) {
            return __Pyx_NewRef(op->func_is_coroutine);
        }
ignore:
        PyErr_Clear();
    }
#endif
    op->func_is_coroutine = __Pyx_PyBool_FromLong(is_coroutine);
    return __Pyx_NewRef(op->func_is_coroutine);
}
#if CYTHON_COMPILING_IN_LIMITED_API
static PyObject *
__Pyx_CyFunction_get_module(__pyx_CyFunctionObject *op, void *context) {
    CYTHON_UNUSED_VAR(context);
    return PyObject_GetAttrString(op->func, "__module__");
}
static int
__Pyx_CyFunction_set_module(__pyx_CyFunctionObject *op, PyObject* value, void *context) {
    CYTHON_UNUSED_VAR(context);
    return PyObject_SetAttrString(op->func, "__module__", value);
}
#endif
static PyGetSetDef __pyx_CyFunction_getsets[] = {
    {(char *) "func_doc", (getter)__Pyx_CyFunction_get_doc, (setter)__Pyx_CyFunction_set_doc, 0, 0},
    {(char *) "__doc__",  (getter)__Pyx_CyFunction_get_doc, (setter)__Pyx_CyFunction_set_doc, 0, 0},
    {(char *) "func_name", (getter)__Pyx_CyFunction_get_name, (setter)__Pyx_CyFunction_set_name, 0, 0},
    {(char *) "__name__", (getter)__Pyx_CyFunction_get_name, (setter)__Pyx_CyFunction_set_name, 0, 0},
    {(char *) "__qualname__", (getter)__Pyx_CyFunction_get_qualname, (setter)__Pyx_CyFunction_set_qualname, 0, 0},
    {(char *) "func_dict", (getter)__Pyx_CyFunction_get_dict, (setter)__Pyx_CyFunction_set_dict, 0, 0},
    {(char *) "__dict__", (getter)__Pyx_CyFunction_get_dict, (setter)__Pyx_CyFunction_set_dict, 0, 0},
    {(char *) "func_globals", (getter)__Pyx_CyFunction_get_globals, 0, 0, 0},
    {(char *) "__globals__", (getter)__Pyx_CyFunction_get_globals, 0, 0, 0},
    {(char *) "func_closure", (getter)__Pyx_CyFunction_get_closure, 0, 0, 0},
    {(char *) "__closure__", (getter)__Pyx_CyFunction_get_closure, 0, 0, 0},
    {(char *) "func_code", (getter)__Pyx_CyFunction_get_code, 0, 0, 0},
    {(char *) "__code__", (getter)__Pyx_CyFunction_get_code, 0, 0, 0},
    {(char *) "func_defaults", (getter)__Pyx_CyFunction_get_defaults, (setter)__Pyx_CyFunction_set_defaults, 0, 0},
    {(char *) "__defaults__", (getter)__Pyx_CyFunction_get_defaults, (setter)__Pyx_CyFunction_set_defaults, 0, 0},
    {(char *) "__kwdefaults__", (getter)__Pyx_CyFunction_get_kwdefaults, (setter)__Pyx_CyFunction_set_kwdefaults, 0, 0},
    {(char *) "__annotations__", (getter)__Pyx_CyFunction_get_annotations, (setter)__Pyx_CyFunction_set_annotations, 0, 0},
    {(char *) "_is_coroutine", (getter)__Pyx_CyFunction_get_is_coroutine, 0, 0, 0},
#if CYTHON_COMPILING_IN_LIMITED_API
    {"__module__", (getter)__Pyx_CyFunction_get_module, (setter)__Pyx_CyFunction_set_module, 0, 0},
#endif
    {0, 0, 0, 0, 0}
};
static PyMemberDef __pyx_CyFunction_members[] = {
#if !CYTHON_COMPILING_IN_LIMITED_API
    {(char *) "__module__", T_OBJECT, offsetof(PyCFunctionObject, m_module), 0, 0},
#endif
#if CYTHON_USE_TYPE_SPECS
    {(char *) "__dictoffset__", T_PYSSIZET, offsetof(__pyx_CyFunctionObject, func_dict), READONLY, 0},
#if CYTHON_METH_FASTCALL
#if CYTHON_BACKPORT_VECTORCALL
    {(char *) "__vectorcalloffset__", T_PYSSIZET, offsetof(__pyx_CyFunctionObject, func_vectorcall), READONLY, 0},
#else
#if !CYTHON_COMPILING_IN_LIMITED_API
    {(char *) "__vectorcalloffset__", T_PYSSIZET, offsetof(PyCFunctionObject, vectorcall), READONLY, 0},
#endif
#endif
#endif
#if PY_VERSION_HEX < 0x030500A0 || CYTHON_COMPILING_IN_LIMITED_API
    {(char *) "__weaklistoffset__", T_PYSSIZET, offsetof(__pyx_CyFunctionObject, func_weakreflist), READONLY, 0},
#else
    {(char *) "__weaklistoffset__", T_PYSSIZET, offsetof(PyCFunctionObject, m_weakreflist), READONLY, 0},
#endif
#endif
    {0, 0, 0,  0, 0}
};
static PyObject *
__Pyx_CyFunction_reduce(__pyx_CyFunctionObject *m, PyObject *args)
{
    CYTHON_UNUSED_VAR(args);
#if PY_MAJOR_VERSION >= 3
    Py_INCREF(m->func_qualname);
    return m->func_qualname;
#else
    return PyString_FromString(((PyCFunctionObject*)m)->m_ml->ml_name);
#endif
}
static PyMethodDef __pyx_CyFunction_methods[] = {
    {"__reduce__", (PyCFunction)__Pyx_CyFunction_reduce, METH_VARARGS, 0},
    {0, 0, 0, 0}
};
#if PY_VERSION_HEX < 0x030500A0 || CYTHON_COMPILING_IN_LIMITED_API
#define __Pyx_CyFunction_weakreflist(cyfunc) ((cyfunc)->func_weakreflist)
#else
#define __Pyx_CyFunction_weakreflist(cyfunc) (((PyCFunctionObject*)cyfunc)->m_weakreflist)
#endif
static PyObject *__Pyx_CyFunction_Init(__pyx_CyFunctionObject *op, PyMethodDef *ml, int flags, PyObject* qualname,
                                       PyObject *closure, PyObject *module, PyObject* globals, PyObject* code) {
#if !CYTHON_COMPILING_IN_LIMITED_API
    PyCFunctionObject *cf = (PyCFunctionObject*) op;
#endif
    if (unlikely(op == NULL))
        return NULL;
#if CYTHON_COMPILING_IN_LIMITED_API
    op->func = PyCFunction_NewEx(ml, (PyObject*)op, module);
    if (unlikely(!op->func)) return NULL;
#endif
    op->flags = flags;
    __Pyx_CyFunction_weakreflist(op) = NULL;
#if !CYTHON_COMPILING_IN_LIMITED_API
    cf->m_ml = ml;
    cf->m_self = (PyObject *) op;
#endif
    Py_XINCREF(closure);
    op->func_closure = closure;
#if !CYTHON_COMPILING_IN_LIMITED_API
    Py_XINCREF(module);
    cf->m_module = module;
#endif
    op->func_dict = NULL;
    op->func_name = NULL;
    Py_INCREF(qualname);
    op->func_qualname = qualname;
    op->func_doc = NULL;
#if PY_VERSION_HEX < 0x030900B1 || CYTHON_COMPILING_IN_LIMITED_API
    op->func_classobj = NULL;
#else
    ((PyCMethodObject*)op)->mm_class = NULL;
#endif
    op->func_globals = globals;
    Py_INCREF(op->func_globals);
    Py_XINCREF(code);
    op->func_code = code;
    op->defaults_pyobjects = 0;
    op->defaults_size = 0;
    op->defaults = NULL;
    op->defaults_tuple = NULL;
    op->defaults_kwdict = NULL;
    op->defaults_getter = NULL;
    op->func_annotations = NULL;
    op->func_is_coroutine = NULL;
#if CYTHON_METH_FASTCALL
    switch (ml->ml_flags & (METH_VARARGS | METH_FASTCALL | METH_NOARGS | METH_O | METH_KEYWORDS | METH_METHOD)) {
    case METH_NOARGS:
        __Pyx_CyFunction_func_vectorcall(op) = __Pyx_CyFunction_Vectorcall_NOARGS;
        break;
    case METH_O:
        __Pyx_CyFunction_func_vectorcall(op) = __Pyx_CyFunction_Vectorcall_O;
        break;
    case METH_METHOD | METH_FASTCALL | METH_KEYWORDS:
        __Pyx_CyFunction_func_vectorcall(op) = __Pyx_CyFunction_Vectorcall_FASTCALL_KEYWORDS_METHOD;
        break;
    case METH_FASTCALL | METH_KEYWORDS:
        __Pyx_CyFunction_func_vectorcall(op) = __Pyx_CyFunction_Vectorcall_FASTCALL_KEYWORDS;
        break;
    case METH_VARARGS | METH_KEYWORDS:
        __Pyx_CyFunction_func_vectorcall(op) = NULL;
        break;
    default:
        PyErr_SetString(PyExc_SystemError, "Bad call flags for CyFunction");
        Py_DECREF(op);
        return NULL;
    }
#endif
    return (PyObject *) op;
}
static int
__Pyx_CyFunction_clear(__pyx_CyFunctionObject *m)
{
    Py_CLEAR(m->func_closure);
#if CYTHON_COMPILING_IN_LIMITED_API
    Py_CLEAR(m->func);
#else
    Py_CLEAR(((PyCFunctionObject*)m)->m_module);
#endif
    Py_CLEAR(m->func_dict);
    Py_CLEAR(m->func_name);
    Py_CLEAR(m->func_qualname);
    Py_CLEAR(m->func_doc);
    Py_CLEAR(m->func_globals);
    Py_CLEAR(m->func_code);
#if !CYTHON_COMPILING_IN_LIMITED_API
#if PY_VERSION_HEX < 0x030900B1
    Py_CLEAR(__Pyx_CyFunction_GetClassObj(m));
#else
    {
        PyObject *cls = (PyObject*) ((PyCMethodObject *) (m))->mm_class;
        ((PyCMethodObject *) (m))->mm_class = NULL;
        Py_XDECREF(cls);
    }
#endif
#endif
    Py_CLEAR(m->defaults_tuple);
    Py_CLEAR(m->defaults_kwdict);
    Py_CLEAR(m->func_annotations);
    Py_CLEAR(m->func_is_coroutine);
    if (m->defaults) {
        PyObject **pydefaults = __Pyx_CyFunction_Defaults(PyObject *, m);
        int i;
        for (i = 0; i < m->defaults_pyobjects; i++)
            Py_XDECREF(pydefaults[i]);
        PyObject_Free(m->defaults);
        m->defaults = NULL;
    }
    return 0;
}
static void __Pyx__CyFunction_dealloc(__pyx_CyFunctionObject *m)
{
    if (__Pyx_CyFunction_weakreflist(m) != NULL)
        PyObject_ClearWeakRefs((PyObject *) m);
    __Pyx_CyFunction_clear(m);
    __Pyx_PyHeapTypeObject_GC_Del(m);
}
static void __Pyx_CyFunction_dealloc(__pyx_CyFunctionObject *m)
{
    PyObject_GC_UnTrack(m);
    __Pyx__CyFunction_dealloc(m);
}
static int __Pyx_CyFunction_traverse(__pyx_CyFunctionObject *m, visitproc visit, void *arg)
{
    Py_VISIT(m->func_closure);
#if CYTHON_COMPILING_IN_LIMITED_API
    Py_VISIT(m->func);
#else
    Py_VISIT(((PyCFunctionObject*)m)->m_module);
#endif
    Py_VISIT(m->func_dict);
    Py_VISIT(m->func_name);
    Py_VISIT(m->func_qualname);
    Py_VISIT(m->func_doc);
    Py_VISIT(m->func_globals);
    Py_VISIT(m->func_code);
#if !CYTHON_COMPILING_IN_LIMITED_API
    Py_VISIT(__Pyx_CyFunction_GetClassObj(m));
#endif
    Py_VISIT(m->defaults_tuple);
    Py_VISIT(m->defaults_kwdict);
    Py_VISIT(m->func_is_coroutine);
    if (m->defaults) {
        PyObject **pydefaults = __Pyx_CyFunction_Defaults(PyObject *, m);
        int i;
        for (i = 0; i < m->defaults_pyobjects; i++)
            Py_VISIT(pydefaults[i]);
    }
    return 0;
}
static PyObject*
__Pyx_CyFunction_repr(__pyx_CyFunctionObject *op)
{
#if PY_MAJOR_VERSION >= 3
    return PyUnicode_FromFormat("<cyfunction %U at %p>",
                                op->func_qualname, (void *)op);
#else
    return PyString_FromFormat("<cyfunction %s at %p>",
                               PyString_AsString(op->func_qualname), (void *)op);
#endif
}
static PyObject * __Pyx_CyFunction_CallMethod(PyObject *func, PyObject *self, PyObject *arg, PyObject *kw) {
#if CYTHON_COMPILING_IN_LIMITED_API
    PyObject *f = ((__pyx_CyFunctionObject*)func)->func;
    PyObject *py_name = NULL;
    PyCFunction meth;
    int flags;
    meth = PyCFunction_GetFunction(f);
    if (unlikely(!meth)) return NULL;
    flags = PyCFunction_GetFlags(f);
    if (unlikely(flags < 0)) return NULL;
#else
    PyCFunctionObject* f = (PyCFunctionObject*)func;
    PyCFunction meth = f->m_ml->ml_meth;
    int flags = f->m_ml->ml_flags;
#endif
    Py_ssize_t size;
    switch (flags & (METH_VARARGS | METH_KEYWORDS | METH_NOARGS | METH_O)) {
    case METH_VARARGS:
        if (likely(kw == NULL || PyDict_Size(kw) == 0))
            return (*meth)(self, arg);
        break;
    case METH_VARARGS | METH_KEYWORDS:
        return (*(PyCFunctionWithKeywords)(void*)meth)(self, arg, kw);
    case METH_NOARGS:
        if (likely(kw == NULL || PyDict_Size(kw) == 0)) {
#if CYTHON_ASSUME_SAFE_MACROS
            size = PyTuple_GET_SIZE(arg);
#else
            size = PyTuple_Size(arg);
            if (unlikely(size < 0)) return NULL;
#endif
            if (likely(size == 0))
                return (*meth)(self, NULL);
#if CYTHON_COMPILING_IN_LIMITED_API
            py_name = __Pyx_CyFunction_get_name((__pyx_CyFunctionObject*)func, NULL);
            if (!py_name) return NULL;
            PyErr_Format(PyExc_TypeError,
                "%.200S() takes no arguments (%" CYTHON_FORMAT_SSIZE_T "d given)",
                py_name, size);
            Py_DECREF(py_name);
#else
            PyErr_Format(PyExc_TypeError,
                "%.200s() takes no arguments (%" CYTHON_FORMAT_SSIZE_T "d given)",
                f->m_ml->ml_name, size);
#endif
            return NULL;
        }
        break;
    case METH_O:
        if (likely(kw == NULL || PyDict_Size(kw) == 0)) {
#if CYTHON_ASSUME_SAFE_MACROS
            size = PyTuple_GET_SIZE(arg);
#else
            size = PyTuple_Size(arg);
            if (unlikely(size < 0)) return NULL;
#endif
            if (likely(size == 1)) {
                PyObject *result, *arg0;
                #if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS
                arg0 = PyTuple_GET_ITEM(arg, 0);
                #else
                arg0 = __Pyx_PySequence_ITEM(arg, 0); if (unlikely(!arg0)) return NULL;
                #endif
                result = (*meth)(self, arg0);
                #if !(CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS)
                Py_DECREF(arg0);
                #endif
                return result;
            }
#if CYTHON_COMPILING_IN_LIMITED_API
            py_name = __Pyx_CyFunction_get_name((__pyx_CyFunctionObject*)func, NULL);
            if (!py_name) return NULL;
            PyErr_Format(PyExc_TypeError,
                "%.200S() takes exactly one argument (%" CYTHON_FORMAT_SSIZE_T "d given)",
                py_name, size);
            Py_DECREF(py_name);
#else
            PyErr_Format(PyExc_TypeError,
                "%.200s() takes exactly one argument (%" CYTHON_FORMAT_SSIZE_T "d given)",
                f->m_ml->ml_name, size);
#endif
            return NULL;
        }
        break;
    default:
        PyErr_SetString(PyExc_SystemError, "Bad call flags for CyFunction");
        return NULL;
    }
#if CYTHON_COMPILING_IN_LIMITED_API
    py_name = __Pyx_CyFunction_get_name((__pyx_CyFunctionObject*)func, NULL);
    if (!py_name) return NULL;
    PyErr_Format(PyExc_TypeError, "%.200S() takes no keyword arguments",
                 py_name);
    Py_DECREF(py_name);
#else
    PyErr_Format(PyExc_TypeError, "%.200s() takes no keyword arguments",
                 f->m_ml->ml_name);
#endif
    return NULL;
}
static CYTHON_INLINE PyObject *__Pyx_CyFunction_Call(PyObject *func, PyObject *arg, PyObject *kw) {
    PyObject *self, *result;
#if CYTHON_COMPILING_IN_LIMITED_API
    self = PyCFunction_GetSelf(((__pyx_CyFunctionObject*)func)->func);
    if (unlikely(!self) && PyErr_Occurred()) return NULL;
#else
    self = ((PyCFunctionObject*)func)->m_self;
#endif
    result = __Pyx_CyFunction_CallMethod(func, self, arg, kw);
    return result;
}
static PyObject *__Pyx_CyFunction_CallAsMethod(PyObject *func, PyObject *args, PyObject *kw) {
    PyObject *result;
    __pyx_CyFunctionObject *cyfunc = (__pyx_CyFunctionObject *) func;
#if CYTHON_METH_FASTCALL
     __pyx_vectorcallfunc vc = __Pyx_CyFunction_func_vectorcall(cyfunc);
    if (vc) {
#if CYTHON_ASSUME_SAFE_MACROS
        return __Pyx_PyVectorcall_FastCallDict(func, vc, &PyTuple_GET_ITEM(args, 0), (size_t)PyTuple_GET_SIZE(args), kw);
#else
        (void) &__Pyx_PyVectorcall_FastCallDict;
        return PyVectorcall_Call(func, args, kw);
#endif
    }
#endif
    if ((cyfunc->flags & __Pyx_CYFUNCTION_CCLASS) && !(cyfunc->flags & __Pyx_CYFUNCTION_STATICMETHOD)) {
        Py_ssize_t argc;
        PyObject *new_args;
        PyObject *self;
#if CYTHON_ASSUME_SAFE_MACROS
        argc = PyTuple_GET_SIZE(args);
#else
        argc = PyTuple_Size(args);
        if (unlikely(!argc) < 0) return NULL;
#endif
        new_args = PyTuple_GetSlice(args, 1, argc);
        if (unlikely(!new_args))
            return NULL;
        self = PyTuple_GetItem(args, 0);
        if (unlikely(!self)) {
            Py_DECREF(new_args);
#if PY_MAJOR_VERSION > 2
            PyErr_Format(PyExc_TypeError,
                         "unbound method %.200S() needs an argument",
                         cyfunc->func_qualname);
#else
            PyErr_SetString(PyExc_TypeError,
                            "unbound method needs an argument");
#endif
            return NULL;
        }
        result = __Pyx_CyFunction_CallMethod(func, self, new_args, kw);
        Py_DECREF(new_args);
    } else {
        result = __Pyx_CyFunction_Call(func, args, kw);
    }
    return result;
}
#if CYTHON_METH_FASTCALL
static CYTHON_INLINE int __Pyx_CyFunction_Vectorcall_CheckArgs(__pyx_CyFunctionObject *cyfunc, Py_ssize_t nargs, PyObject *kwnames)
{
    int ret = 0;
    if ((cyfunc->flags & __Pyx_CYFUNCTION_CCLASS) && !(cyfunc->flags & __Pyx_CYFUNCTION_STATICMETHOD)) {
        if (unlikely(nargs < 1)) {
            PyErr_Format(PyExc_TypeError, "%.200s() needs an argument",
                         ((PyCFunctionObject*)cyfunc)->m_ml->ml_name);
            return -1;
        }
        ret = 1;
    }
    if (unlikely(kwnames) && unlikely(PyTuple_GET_SIZE(kwnames))) {
        PyErr_Format(PyExc_TypeError,
                     "%.200s() takes no keyword arguments", ((PyCFunctionObject*)cyfunc)->m_ml->ml_name);
        return -1;
    }
    return ret;
}
static PyObject * __Pyx_CyFunction_Vectorcall_NOARGS(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames)
{
    __pyx_CyFunctionObject *cyfunc = (__pyx_CyFunctionObject *)func;
    PyMethodDef* def = ((PyCFunctionObject*)cyfunc)->m_ml;
#if CYTHON_BACKPORT_VECTORCALL
    Py_ssize_t nargs = (Py_ssize_t)nargsf;
#else
    Py_ssize_t nargs = PyVectorcall_NARGS(nargsf);
#endif
    PyObject *self;
    switch (__Pyx_CyFunction_Vectorcall_CheckArgs(cyfunc, nargs, kwnames)) {
    case 1:
        self = args[0];
        args += 1;
        nargs -= 1;
        break;
    case 0:
        self = ((PyCFunctionObject*)cyfunc)->m_self;
        break;
    default:
        return NULL;
    }
    if (unlikely(nargs != 0)) {
        PyErr_Format(PyExc_TypeError,
            "%.200s() takes no arguments (%" CYTHON_FORMAT_SSIZE_T "d given)",
            def->ml_name, nargs);
        return NULL;
    }
    return def->ml_meth(self, NULL);
}
static PyObject * __Pyx_CyFunction_Vectorcall_O(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames)
{
    __pyx_CyFunctionObject *cyfunc = (__pyx_CyFunctionObject *)func;
    PyMethodDef* def = ((PyCFunctionObject*)cyfunc)->m_ml;
#if CYTHON_BACKPORT_VECTORCALL
    Py_ssize_t nargs = (Py_ssize_t)nargsf;
#else
    Py_ssize_t nargs = PyVectorcall_NARGS(nargsf);
#endif
    PyObject *self;
    switch (__Pyx_CyFunction_Vectorcall_CheckArgs(cyfunc, nargs, kwnames)) {
    case 1:
        self = args[0];
        args += 1;
        nargs -= 1;
        break;
    case 0:
        self = ((PyCFunctionObject*)cyfunc)->m_self;
        break;
    default:
        return NULL;
    }
    if (unlikely(nargs != 1)) {
        PyErr_Format(PyExc_TypeError,
            "%.200s() takes exactly one argument (%" CYTHON_FORMAT_SSIZE_T "d given)",
            def->ml_name, nargs);
        return NULL;
    }
    return def->ml_meth(self, args[0]);
}
static PyObject * __Pyx_CyFunction_Vectorcall_FASTCALL_KEYWORDS(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames)
{
    __pyx_CyFunctionObject *cyfunc = (__pyx_CyFunctionObject *)func;
    PyMethodDef* def = ((PyCFunctionObject*)cyfunc)->m_ml;
#if CYTHON_BACKPORT_VECTORCALL
    Py_ssize_t nargs = (Py_ssize_t)nargsf;
#else
    Py_ssize_t nargs = PyVectorcall_NARGS(nargsf);
#endif
    PyObject *self;
    switch (__Pyx_CyFunction_Vectorcall_CheckArgs(cyfunc, nargs, NULL)) {
    case 1:
        self = args[0];
        args += 1;
        nargs -= 1;
        break;
    case 0:
        self = ((PyCFunctionObject*)cyfunc)->m_self;
        break;
    default:
        return NULL;
    }
    return ((__Pyx_PyCFunctionFastWithKeywords)(void(*)(void))def->ml_meth)(self, args, nargs, kwnames);
}
static PyObject * __Pyx_CyFunction_Vectorcall_FASTCALL_KEYWORDS_METHOD(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames)
{
    __pyx_CyFunctionObject *cyfunc = (__pyx_CyFunctionObject *)func;
    PyMethodDef* def = ((PyCFunctionObject*)cyfunc)->m_ml;
    PyTypeObject *cls = (PyTypeObject *) __Pyx_CyFunction_GetClassObj(cyfunc);
#if CYTHON_BACKPORT_VECTORCALL
    Py_ssize_t nargs = (Py_ssize_t)nargsf;
#else
    Py_ssize_t nargs = PyVectorcall_NARGS(nargsf);
#endif
    PyObject *self;
    switch (__Pyx_CyFunction_Vectorcall_CheckArgs(cyfunc, nargs, NULL)) {
    case 1:
        self = args[0];
        args += 1;
        nargs -= 1;
        break;
    case 0:
        self = ((PyCFunctionObject*)cyfunc)->m_self;
        break;
    default:
        return NULL;
    }
    return ((__Pyx_PyCMethod)(void(*)(void))def->ml_meth)(self, cls, args, (size_t)nargs, kwnames);
}
#endif
#if CYTHON_USE_TYPE_SPECS
static PyType_Slot __pyx_CyFunctionType_slots[] = {
    {Py_tp_dealloc, (void *)__Pyx_CyFunction_dealloc},
    {Py_tp_repr, (void *)__Pyx_CyFunction_repr},
    {Py_tp_call, (void *)__Pyx_CyFunction_CallAsMethod},
    {Py_tp_traverse, (void *)__Pyx_CyFunction_traverse},
    {Py_tp_clear, (void *)__Pyx_CyFunction_clear},
    {Py_tp_methods, (void *)__pyx_CyFunction_methods},
    {Py_tp_members, (void *)__pyx_CyFunction_members},
    {Py_tp_getset, (void *)__pyx_CyFunction_getsets},
    {Py_tp_descr_get, (void *)__Pyx_PyMethod_New},
    {0, 0},
};
static PyType_Spec __pyx_CyFunctionType_spec = {
    __PYX_TYPE_MODULE_PREFIX "cython_function_or_method",
    sizeof(__pyx_CyFunctionObject),
    0,
#ifdef Py_TPFLAGS_METHOD_DESCRIPTOR
    Py_TPFLAGS_METHOD_DESCRIPTOR |
#endif
#if (defined(_Py_TPFLAGS_HAVE_VECTORCALL) && CYTHON_METH_FASTCALL)
    _Py_TPFLAGS_HAVE_VECTORCALL |
#endif
    Py_TPFLAGS_DEFAULT | Py_TPFLAGS_HAVE_GC | Py_TPFLAGS_BASETYPE,
    __pyx_CyFunctionType_slots
};
#else
static PyTypeObject __pyx_CyFunctionType_type = {
    PyVarObject_HEAD_INIT(0, 0)
    __PYX_TYPE_MODULE_PREFIX "cython_function_or_method",
    sizeof(__pyx_CyFunctionObject),
    0,
    (destructor) __Pyx_CyFunction_dealloc,
#if !CYTHON_METH_FASTCALL
    0,
#elif CYTHON_BACKPORT_VECTORCALL
    (printfunc)offsetof(__pyx_CyFunctionObject, func_vectorcall),
#else
    offsetof(PyCFunctionObject, vectorcall),
#endif
    0,
    0,
#if PY_MAJOR_VERSION < 3
    0,
#else
    0,
#endif
    (reprfunc) __Pyx_CyFunction_repr,
    0,
    0,
    0,
    0,
    __Pyx_CyFunction_CallAsMethod,
    0,
    0,
    0,
    0,
#ifdef Py_TPFLAGS_METHOD_DESCRIPTOR
    Py_TPFLAGS_METHOD_DESCRIPTOR |
#endif
#if defined(_Py_TPFLAGS_HAVE_VECTORCALL) && CYTHON_METH_FASTCALL
    _Py_TPFLAGS_HAVE_VECTORCALL |
#endif
    Py_TPFLAGS_DEFAULT | Py_TPFLAGS_HAVE_GC | Py_TPFLAGS_BASETYPE,
    0,
    (traverseproc) __Pyx_CyFunction_traverse,
    (inquiry) __Pyx_CyFunction_clear,
    0,
#if PY_VERSION_HEX < 0x030500A0
    offsetof(__pyx_CyFunctionObject, func_weakreflist),
#else
    offsetof(PyCFunctionObject, m_weakreflist),
#endif
    0,
    0,
    __pyx_CyFunction_methods,
    __pyx_CyFunction_members,
    __pyx_CyFunction_getsets,
    0,
    0,
    __Pyx_PyMethod_New,
    0,
    offsetof(__pyx_CyFunctionObject, func_dict),
    0,
    0,
    0,
    0,
    0,
    0,
    0,
    0,
    0,
    0,
    0,
    0,
#if PY_VERSION_HEX >= 0x030400a1
    0,
#endif
#if PY_VERSION_HEX >= 0x030800b1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07030800)
    0,
#endif
#if __PYX_NEED_TP_PRINT_SLOT
    0,
#endif
#if PY_VERSION_HEX >= 0x030C0000
    0,
#endif
#if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX >= 0x03090000 && PY_VERSION_HEX < 0x030a0000
    0,
#endif
};
#endif
static int __pyx_CyFunction_init(PyObject *module) {
#if CYTHON_USE_TYPE_SPECS
    __pyx_CyFunctionType = __Pyx_FetchCommonTypeFromSpec(module, &__pyx_CyFunctionType_spec, NULL);
#else
    CYTHON_UNUSED_VAR(module);
    __pyx_CyFunctionType = __Pyx_FetchCommonType(&__pyx_CyFunctionType_type);
#endif
    if (unlikely(__pyx_CyFunctionType == NULL)) {
        return -1;
    }
    return 0;
}
static CYTHON_INLINE void *__Pyx_CyFunction_InitDefaults(PyObject *func, size_t size, int pyobjects) {
    __pyx_CyFunctionObject *m = (__pyx_CyFunctionObject *) func;
    m->defaults = PyObject_Malloc(size);
    if (unlikely(!m->defaults))
        return PyErr_NoMemory();
    memset(m->defaults, 0, size);
    m->defaults_pyobjects = pyobjects;
    m->defaults_size = size;
    return m->defaults;
}
static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsTuple(PyObject *func, PyObject *tuple) {
    __pyx_CyFunctionObject *m = (__pyx_CyFunctionObject *) func;
    m->defaults_tuple = tuple;
    Py_INCREF(tuple);
}
static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsKwDict(PyObject *func, PyObject *dict) {
    __pyx_CyFunctionObject *m = (__pyx_CyFunctionObject *) func;
    m->defaults_kwdict = dict;
    Py_INCREF(dict);
}
static CYTHON_INLINE void __Pyx_CyFunction_SetAnnotationsDict(PyObject *func, PyObject *dict) {
    __pyx_CyFunctionObject *m = (__pyx_CyFunctionObject *) func;
    m->func_annotations = dict;
    Py_INCREF(dict);
}

/* CythonFunction */
static PyObject *__Pyx_CyFunction_New(PyMethodDef *ml, int flags, PyObject* qualname,
                                      PyObject *closure, PyObject *module, PyObject* globals, PyObject* code) {
    PyObject *op = __Pyx_CyFunction_Init(
        PyObject_GC_New(__pyx_CyFunctionObject, __pyx_CyFunctionType),
        ml, flags, qualname, closure, module, globals, code
    );
    if (likely(op)) {
        PyObject_GC_Track(op);
    }
    return op;
}

/* PyDictVersioning */
#if CYTHON_USE_DICT_VERSIONS && CYTHON_USE_TYPE_SLOTS
static CYTHON_INLINE PY_UINT64_T __Pyx_get_tp_dict_version(PyObject *obj) {
    PyObject *dict = Py_TYPE(obj)->tp_dict;
    return likely(dict) ? __PYX_GET_DICT_VERSION(dict) : 0;
}
static CYTHON_INLINE PY_UINT64_T __Pyx_get_object_dict_version(PyObject *obj) {
    PyObject **dictptr = NULL;
    Py_ssize_t offset = Py_TYPE(obj)->tp_dictoffset;
    if (offset) {
#if CYTHON_COMPILING_IN_CPYTHON
        dictptr = (likely(offset > 0)) ? (PyObject **) ((char *)obj + offset) : _PyObject_GetDictPtr(obj);
#else
        dictptr = _PyObject_GetDictPtr(obj);
#endif
    }
    return (dictptr && *dictptr) ? __PYX_GET_DICT_VERSION(*dictptr) : 0;
}
static CYTHON_INLINE int __Pyx_object_dict_version_matches(PyObject* obj, PY_UINT64_T tp_dict_version, PY_UINT64_T obj_dict_version) {
    PyObject *dict = Py_TYPE(obj)->tp_dict;
    if (unlikely(!dict) || unlikely(tp_dict_version != __PYX_GET_DICT_VERSION(dict)))
        return 0;
    return obj_dict_version == __Pyx_get_object_dict_version(obj);
}
#endif

/* CLineInTraceback */
#ifndef CYTHON_CLINE_IN_TRACEBACK
static int __Pyx_CLineForTraceback(PyThreadState *tstate, int c_line) {
    PyObject *use_cline;
    PyObject *ptype, *pvalue, *ptraceback;
#if CYTHON_COMPILING_IN_CPYTHON
    PyObject **cython_runtime_dict;
#endif
    CYTHON_MAYBE_UNUSED_VAR(tstate);
    if (unlikely(!__pyx_cython_runtime)) {
        return c_line;
    }
    __Pyx_ErrFetchInState(tstate, &ptype, &pvalue, &ptraceback);
#if CYTHON_COMPILING_IN_CPYTHON
    cython_runtime_dict = _PyObject_GetDictPtr(__pyx_cython_runtime);
    if (likely(cython_runtime_dict)) {
        __PYX_PY_DICT_LOOKUP_IF_MODIFIED(
            use_cline, *cython_runtime_dict,
            __Pyx_PyDict_GetItemStr(*cython_runtime_dict, __pyx_n_s_cline_in_traceback))
    } else
#endif
    {
      PyObject *use_cline_obj = __Pyx_PyObject_GetAttrStrNoError(__pyx_cython_runtime, __pyx_n_s_cline_in_traceback);
      if (use_cline_obj) {
        use_cline = PyObject_Not(use_cline_obj) ? Py_False : Py_True;
        Py_DECREF(use_cline_obj);
      } else {
        PyErr_Clear();
        use_cline = NULL;
      }
    }
    if (!use_cline) {
        c_line = 0;
        (void) PyObject_SetAttr(__pyx_cython_runtime, __pyx_n_s_cline_in_traceback, Py_False);
    }
    else if (use_cline == Py_False || (use_cline != Py_True && PyObject_Not(use_cline) != 0)) {
        c_line = 0;
    }
    __Pyx_ErrRestoreInState(tstate, ptype, pvalue, ptraceback);
    return c_line;
}
#endif

/* CodeObjectCache */
#if !CYTHON_COMPILING_IN_LIMITED_API
static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
    int start = 0, mid = 0, end = count - 1;
    if (end >= 0 && code_line > entries[end].code_line) {
        return count;
    }
    while (start < end) {
        mid = start + (end - start) / 2;
        if (code_line < entries[mid].code_line) {
            end = mid;
        } else if (code_line > entries[mid].code_line) {
             start = mid + 1;
        } else {
            return mid;
        }
    }
    if (code_line <= entries[mid].code_line) {
        return mid;
    } else {
        return mid + 1;
    }
}
static PyCodeObject *__pyx_find_code_object(int code_line) {
    PyCodeObject* code_object;
    int pos;
    if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
        return NULL;
    }
    pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
    if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
        return NULL;
    }
    code_object = __pyx_code_cache.entries[pos].code_object;
    Py_INCREF(code_object);
    return code_object;
}
static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
    int pos, i;
    __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
    if (unlikely(!code_line)) {
        return;
    }
    if (unlikely(!entries)) {
        entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
        if (likely(entries)) {
            __pyx_code_cache.entries = entries;
            __pyx_code_cache.max_count = 64;
            __pyx_code_cache.count = 1;
            entries[0].code_line = code_line;
            entries[0].code_object = code_object;
            Py_INCREF(code_object);
        }
        return;
    }
    pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
    if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
        PyCodeObject* tmp = entries[pos].code_object;
        entries[pos].code_object = code_object;
        Py_DECREF(tmp);
        return;
    }
    if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
        int new_max = __pyx_code_cache.max_count + 64;
        entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
            __pyx_code_cache.entries, ((size_t)new_max) * sizeof(__Pyx_CodeObjectCacheEntry));
        if (unlikely(!entries)) {
            return;
        }
        __pyx_code_cache.entries = entries;
        __pyx_code_cache.max_count = new_max;
    }
    for (i=__pyx_code_cache.count; i>pos; i--) {
        entries[i] = entries[i-1];
    }
    entries[pos].code_line = code_line;
    entries[pos].code_object = code_object;
    __pyx_code_cache.count++;
    Py_INCREF(code_object);
}
#endif

/* AddTraceback */
#include "compile.h"
#include "frameobject.h"
#include "traceback.h"
#if PY_VERSION_HEX >= 0x030b00a6 && !CYTHON_COMPILING_IN_LIMITED_API
  #ifndef Py_BUILD_CORE
    #define Py_BUILD_CORE 1
  #endif
  #include "internal/pycore_frame.h"
#endif
#if CYTHON_COMPILING_IN_LIMITED_API
static PyObject *__Pyx_PyCode_Replace_For_AddTraceback(PyObject *code, PyObject *scratch_dict,
                                                       PyObject *firstlineno, PyObject *name) {
    PyObject *replace = NULL;
    if (unlikely(PyDict_SetItemString(scratch_dict, "co_firstlineno", firstlineno))) return NULL;
    if (unlikely(PyDict_SetItemString(scratch_dict, "co_name", name))) return NULL;
    replace = PyObject_GetAttrString(code, "replace");
    if (likely(replace)) {
        PyObject *result;
        result = PyObject_Call(replace, __pyx_empty_tuple, scratch_dict);
        Py_DECREF(replace);
        return result;
    }
    PyErr_Clear();
    #if __PYX_LIMITED_VERSION_HEX < 0x030780000
    {
        PyObject *compiled = NULL, *result = NULL;
        if (unlikely(PyDict_SetItemString(scratch_dict, "code", code))) return NULL;
        if (unlikely(PyDict_SetItemString(scratch_dict, "type", (PyObject*)(&PyType_Type)))) return NULL;
        compiled = Py_CompileString(
            "out = type(code)(\n"
            "  code.co_argcount, code.co_kwonlyargcount, code.co_nlocals, code.co_stacksize,\n"
            "  code.co_flags, code.co_code, code.co_consts, code.co_names,\n"
            "  code.co_varnames, code.co_filename, co_name, co_firstlineno,\n"
            "  code.co_lnotab)\n", "<dummy>", Py_file_input);
        if (!compiled) return NULL;
        result = PyEval_EvalCode(compiled, scratch_dict, scratch_dict);
        Py_DECREF(compiled);
        if (!result) PyErr_Print();
        Py_DECREF(result);
        result = PyDict_GetItemString(scratch_dict, "out");
        if (result) Py_INCREF(result);
        return result;
    }
    #else
    return NULL;
    #endif
}
static void __Pyx_AddTraceback(const char *funcname, int c_line,
                               int py_line, const char *filename) {
    PyObject *code_object = NULL, *py_py_line = NULL, *py_funcname = NULL, *dict = NULL;
    PyObject *replace = NULL, *getframe = NULL, *frame = NULL;
    PyObject *exc_type, *exc_value, *exc_traceback;
    int success = 0;
    if (c_line) {
        (void) __pyx_cfilenm;
        (void) __Pyx_CLineForTraceback(__Pyx_PyThreadState_Current, c_line);
    }
    PyErr_Fetch(&exc_type, &exc_value, &exc_traceback);
    code_object = Py_CompileString("_getframe()", filename, Py_eval_input);
    if (unlikely(!code_object)) goto bad;
    py_py_line = PyLong_FromLong(py_line);
    if (unlikely(!py_py_line)) goto bad;
    py_funcname = PyUnicode_FromString(funcname);
    if (unlikely(!py_funcname)) goto bad;
    dict = PyDict_New();
    if (unlikely(!dict)) goto bad;
    {
        PyObject *old_code_object = code_object;
        code_object = __Pyx_PyCode_Replace_For_AddTraceback(code_object, dict, py_py_line, py_funcname);
        Py_DECREF(old_code_object);
    }
    if (unlikely(!code_object)) goto bad;
    getframe = PySys_GetObject("_getframe");
    if (unlikely(!getframe)) goto bad;
    if (unlikely(PyDict_SetItemString(dict, "_getframe", getframe))) goto bad;
    frame = PyEval_EvalCode(code_object, dict, dict);
    if (unlikely(!frame) || frame == Py_None) goto bad;
    success = 1;
  bad:
    PyErr_Restore(exc_type, exc_value, exc_traceback);
    Py_XDECREF(code_object);
    Py_XDECREF(py_py_line);
    Py_XDECREF(py_funcname);
    Py_XDECREF(dict);
    Py_XDECREF(replace);
    if (success) {
        PyTraceBack_Here(
            (struct _frame*)frame);
    }
    Py_XDECREF(frame);
}
#else
static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
            const char *funcname, int c_line,
            int py_line, const char *filename) {
    PyCodeObject *py_code = NULL;
    PyObject *py_funcname = NULL;
    #if PY_MAJOR_VERSION < 3
    PyObject *py_srcfile = NULL;
    py_srcfile = PyString_FromString(filename);
    if (!py_srcfile) goto bad;
    #endif
    if (c_line) {
        #if PY_MAJOR_VERSION < 3
        py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
        if (!py_funcname) goto bad;
        #else
        py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
        if (!py_funcname) goto bad;
        funcname = PyUnicode_AsUTF8(py_funcname);
        if (!funcname) goto bad;
        #endif
    }
    else {
        #if PY_MAJOR_VERSION < 3
        py_funcname = PyString_FromString(funcname);
        if (!py_funcname) goto bad;
        #endif
    }
    #if PY_MAJOR_VERSION < 3
    py_code = __Pyx_PyCode_New(
        0,
        0,
        0,
        0,
        0,
        0,
        __pyx_empty_bytes, /*PyObject *code,*/
        __pyx_empty_tuple, /*PyObject *consts,*/
        __pyx_empty_tuple, /*PyObject *names,*/
        __pyx_empty_tuple, /*PyObject *varnames,*/
        __pyx_empty_tuple, /*PyObject *freevars,*/
        __pyx_empty_tuple, /*PyObject *cellvars,*/
        py_srcfile,   /*PyObject *filename,*/
        py_funcname,  /*PyObject *name,*/
        py_line,
        __pyx_empty_bytes  /*PyObject *lnotab*/
    );
    Py_DECREF(py_srcfile);
    #else
    py_code = PyCode_NewEmpty(filename, funcname, py_line);
    #endif
    Py_XDECREF(py_funcname);
    return py_code;
bad:
    Py_XDECREF(py_funcname);
    #if PY_MAJOR_VERSION < 3
    Py_XDECREF(py_srcfile);
    #endif
    return NULL;
}
static void __Pyx_AddTraceback(const char *funcname, int c_line,
                               int py_line, const char *filename) {
    PyCodeObject *py_code = 0;
    PyFrameObject *py_frame = 0;
    PyThreadState *tstate = __Pyx_PyThreadState_Current;
    PyObject *ptype, *pvalue, *ptraceback;
    if (c_line) {
        c_line = __Pyx_CLineForTraceback(tstate, c_line);
    }
    py_code = __pyx_find_code_object(c_line ? -c_line : py_line);
    if (!py_code) {
        __Pyx_ErrFetchInState(tstate, &ptype, &pvalue, &ptraceback);
        py_code = __Pyx_CreateCodeObjectForTraceback(
            funcname, c_line, py_line, filename);
        if (!py_code) {
            /* If the code object creation fails, then we should clear the
               fetched exception references and propagate the new exception */
            Py_XDECREF(ptype);
            Py_XDECREF(pvalue);
            Py_XDECREF(ptraceback);
            goto bad;
        }
        __Pyx_ErrRestoreInState(tstate, ptype, pvalue, ptraceback);
        __pyx_insert_code_object(c_line ? -c_line : py_line, py_code);
    }
    py_frame = PyFrame_New(
        tstate,            /*PyThreadState *tstate,*/
        py_code,           /*PyCodeObject *code,*/
        __pyx_d,    /*PyObject *globals,*/
        0                  /*PyObject *locals*/
    );
    if (!py_frame) goto bad;
    __Pyx_PyFrame_SetLineNumber(py_frame, py_line);
    PyTraceBack_Here(py_frame);
bad:
    Py_XDECREF(py_code);
    Py_XDECREF(py_frame);
}
#endif

/* CIntFromPyVerify */
#define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value)\
    __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 0)
#define __PYX_VERIFY_RETURN_INT_EXC(target_type, func_type, func_value)\
    __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 1)
#define __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, exc)\
    {\
        func_type value = func_value;\
        if (sizeof(target_type) < sizeof(func_type)) {\
            if (unlikely(value != (func_type) (target_type) value)) {\
                func_type zero = 0;\
                if (exc && unlikely(value == (func_type)-1 && PyErr_Occurred()))\
                    return (target_type) -1;\
                if (is_unsigned && unlikely(value < zero))\
                    goto raise_neg_overflow;\
                else\
                    goto raise_overflow;\
            }\
        }\
        return (target_type) value;\
    }

/* Declarations */
#if CYTHON_CCOMPLEX && (1) && (!0 || __cplusplus)
  #ifdef __cplusplus
    static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) {
      return ::std::complex< float >(x, y);
    }
  #else
    static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) {
      return x + y*(__pyx_t_float_complex)_Complex_I;
    }
  #endif
#else
    static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) {
      __pyx_t_float_complex z;
      z.real = x;
      z.imag = y;
      return z;
    }
#endif

/* Arithmetic */
#if CYTHON_CCOMPLEX && (1) && (!0 || __cplusplus)
#else
    static CYTHON_INLINE int __Pyx_c_eq_float(__pyx_t_float_complex a, __pyx_t_float_complex b) {
       return (a.real == b.real) && (a.imag == b.imag);
    }
    static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sum_float(__pyx_t_float_complex a, __pyx_t_float_complex b) {
        __pyx_t_float_complex z;
        z.real = a.real + b.real;
        z.imag = a.imag + b.imag;
        return z;
    }
    static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_diff_float(__pyx_t_float_complex a, __pyx_t_float_complex b) {
        __pyx_t_float_complex z;
        z.real = a.real - b.real;
        z.imag = a.imag - b.imag;
        return z;
    }
    static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prod_float(__pyx_t_float_complex a, __pyx_t_float_complex b) {
        __pyx_t_float_complex z;
        z.real = a.real * b.real - a.imag * b.imag;
        z.imag = a.real * b.imag + a.imag * b.real;
        return z;
    }
    #if 1
    static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex a, __pyx_t_float_complex b) {
        if (b.imag == 0) {
            return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.real);
        } else if (fabsf(b.real) >= fabsf(b.imag)) {
            if (b.real == 0 && b.imag == 0) {
                return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.imag);
            } else {
                float r = b.imag / b.real;
                float s = (float)(1.0) / (b.real + b.imag * r);
                return __pyx_t_float_complex_from_parts(
                    (a.real + a.imag * r) * s, (a.imag - a.real * r) * s);
            }
        } else {
            float r = b.real / b.imag;
            float s = (float)(1.0) / (b.imag + b.real * r);
            return __pyx_t_float_complex_from_parts(
                (a.real * r + a.imag) * s, (a.imag * r - a.real) * s);
        }
    }
    #else
    static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex a, __pyx_t_float_complex b) {
        if (b.imag == 0) {
            return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.real);
        } else {
            float denom = b.real * b.real + b.imag * b.imag;
            return __pyx_t_float_complex_from_parts(
                (a.real * b.real + a.imag * b.imag) / denom,
                (a.imag * b.real - a.real * b.imag) / denom);
        }
    }
    #endif
    static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_neg_float(__pyx_t_float_complex a) {
        __pyx_t_float_complex z;
        z.real = -a.real;
        z.imag = -a.imag;
        return z;
    }
    static CYTHON_INLINE int __Pyx_c_is_zero_float(__pyx_t_float_complex a) {
       return (a.real == 0) && (a.imag == 0);
    }
    static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conj_float(__pyx_t_float_complex a) {
        __pyx_t_float_complex z;
        z.real =  a.real;
        z.imag = -a.imag;
        return z;
    }
    #if 1
        static CYTHON_INLINE float __Pyx_c_abs_float(__pyx_t_float_complex z) {
          #if !defined(HAVE_HYPOT) || defined(_MSC_VER)
            return sqrtf(z.real*z.real + z.imag*z.imag);
          #else
            return hypotf(z.real, z.imag);
          #endif
        }
        static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_pow_float(__pyx_t_float_complex a, __pyx_t_float_complex b) {
            __pyx_t_float_complex z;
            float r, lnr, theta, z_r, z_theta;
            if (b.imag == 0 && b.real == (int)b.real) {
                if (b.real < 0) {
                    float denom = a.real * a.real + a.imag * a.imag;
                    a.real = a.real / denom;
                    a.imag = -a.imag / denom;
                    b.real = -b.real;
                }
                switch ((int)b.real) {
                    case 0:
                        z.real = 1;
                        z.imag = 0;
                        return z;
                    case 1:
                        return a;
                    case 2:
                        return __Pyx_c_prod_float(a, a);
                    case 3:
                        z = __Pyx_c_prod_float(a, a);
                        return __Pyx_c_prod_float(z, a);
                    case 4:
                        z = __Pyx_c_prod_float(a, a);
                        return __Pyx_c_prod_float(z, z);
                }
            }
            if (a.imag == 0) {
                if (a.real == 0) {
                    return a;
                } else if ((b.imag == 0) && (a.real >= 0)) {
                    z.real = powf(a.real, b.real);
                    z.imag = 0;
                    return z;
                } else if (a.real > 0) {
                    r = a.real;
                    theta = 0;
                } else {
                    r = -a.real;
                    theta = atan2f(0.0, -1.0);
                }
            } else {
                r = __Pyx_c_abs_float(a);
                theta = atan2f(a.imag, a.real);
            }
            lnr = logf(r);
            z_r = expf(lnr * b.real - theta * b.imag);
            z_theta = theta * b.real + lnr * b.imag;
            z.real = z_r * cosf(z_theta);
            z.imag = z_r * sinf(z_theta);
            return z;
        }
    #endif
#endif

/* Declarations */
#if CYTHON_CCOMPLEX && (1) && (!0 || __cplusplus)
  #ifdef __cplusplus
    static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) {
      return ::std::complex< double >(x, y);
    }
  #else
    static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) {
      return x + y*(__pyx_t_double_complex)_Complex_I;
    }
  #endif
#else
    static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) {
      __pyx_t_double_complex z;
      z.real = x;
      z.imag = y;
      return z;
    }
#endif

/* Arithmetic */
#if CYTHON_CCOMPLEX && (1) && (!0 || __cplusplus)
#else
    static CYTHON_INLINE int __Pyx_c_eq_double(__pyx_t_double_complex a, __pyx_t_double_complex b) {
       return (a.real == b.real) && (a.imag == b.imag);
    }
    static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum_double(__pyx_t_double_complex a, __pyx_t_double_complex b) {
        __pyx_t_double_complex z;
        z.real = a.real + b.real;
        z.imag = a.imag + b.imag;
        return z;
    }
    static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff_double(__pyx_t_double_complex a, __pyx_t_double_complex b) {
        __pyx_t_double_complex z;
        z.real = a.real - b.real;
        z.imag = a.imag - b.imag;
        return z;
    }
    static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod_double(__pyx_t_double_complex a, __pyx_t_double_complex b) {
        __pyx_t_double_complex z;
        z.real = a.real * b.real - a.imag * b.imag;
        z.imag = a.real * b.imag + a.imag * b.real;
        return z;
    }
    #if 1
    static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex a, __pyx_t_double_complex b) {
        if (b.imag == 0) {
            return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.real);
        } else if (fabs(b.real) >= fabs(b.imag)) {
            if (b.real == 0 && b.imag == 0) {
                return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.imag);
            } else {
                double r = b.imag / b.real;
                double s = (double)(1.0) / (b.real + b.imag * r);
                return __pyx_t_double_complex_from_parts(
                    (a.real + a.imag * r) * s, (a.imag - a.real * r) * s);
            }
        } else {
            double r = b.real / b.imag;
            double s = (double)(1.0) / (b.imag + b.real * r);
            return __pyx_t_double_complex_from_parts(
                (a.real * r + a.imag) * s, (a.imag * r - a.real) * s);
        }
    }
    #else
    static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex a, __pyx_t_double_complex b) {
        if (b.imag == 0) {
            return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.real);
        } else {
            double denom = b.real * b.real + b.imag * b.imag;
            return __pyx_t_double_complex_from_parts(
                (a.real * b.real + a.imag * b.imag) / denom,
                (a.imag * b.real - a.real * b.imag) / denom);
        }
    }
    #endif
    static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg_double(__pyx_t_double_complex a) {
        __pyx_t_double_complex z;
        z.real = -a.real;
        z.imag = -a.imag;
        return z;
    }
    static CYTHON_INLINE int __Pyx_c_is_zero_double(__pyx_t_double_complex a) {
       return (a.real == 0) && (a.imag == 0);
    }
    static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj_double(__pyx_t_double_complex a) {
        __pyx_t_double_complex z;
        z.real =  a.real;
        z.imag = -a.imag;
        return z;
    }
    #if 1
        static CYTHON_INLINE double __Pyx_c_abs_double(__pyx_t_double_complex z) {
          #if !defined(HAVE_HYPOT) || defined(_MSC_VER)
            return sqrt(z.real*z.real + z.imag*z.imag);
          #else
            return hypot(z.real, z.imag);
          #endif
        }
        static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow_double(__pyx_t_double_complex a, __pyx_t_double_complex b) {
            __pyx_t_double_complex z;
            double r, lnr, theta, z_r, z_theta;
            if (b.imag == 0 && b.real == (int)b.real) {
                if (b.real < 0) {
                    double denom = a.real * a.real + a.imag * a.imag;
                    a.real = a.real / denom;
                    a.imag = -a.imag / denom;
                    b.real = -b.real;
                }
                switch ((int)b.real) {
                    case 0:
                        z.real = 1;
                        z.imag = 0;
                        return z;
                    case 1:
                        return a;
                    case 2:
                        return __Pyx_c_prod_double(a, a);
                    case 3:
                        z = __Pyx_c_prod_double(a, a);
                        return __Pyx_c_prod_double(z, a);
                    case 4:
                        z = __Pyx_c_prod_double(a, a);
                        return __Pyx_c_prod_double(z, z);
                }
            }
            if (a.imag == 0) {
                if (a.real == 0) {
                    return a;
                } else if ((b.imag == 0) && (a.real >= 0)) {
                    z.real = pow(a.real, b.real);
                    z.imag = 0;
                    return z;
                } else if (a.real > 0) {
                    r = a.real;
                    theta = 0;
                } else {
                    r = -a.real;
                    theta = atan2(0.0, -1.0);
                }
            } else {
                r = __Pyx_c_abs_double(a);
                theta = atan2(a.imag, a.real);
            }
            lnr = log(r);
            z_r = exp(lnr * b.real - theta * b.imag);
            z_theta = theta * b.real + lnr * b.imag;
            z.real = z_r * cos(z_theta);
            z.imag = z_r * sin(z_theta);
            return z;
        }
    #endif
#endif

/* Declarations */
#if CYTHON_CCOMPLEX && (1) && (!0 || __cplusplus)
  #ifdef __cplusplus
    static CYTHON_INLINE __pyx_t_long_double_complex __pyx_t_long_double_complex_from_parts(long double x, long double y) {
      return ::std::complex< long double >(x, y);
    }
  #else
    static CYTHON_INLINE __pyx_t_long_double_complex __pyx_t_long_double_complex_from_parts(long double x, long double y) {
      return x + y*(__pyx_t_long_double_complex)_Complex_I;
    }
  #endif
#else
    static CYTHON_INLINE __pyx_t_long_double_complex __pyx_t_long_double_complex_from_parts(long double x, long double y) {
      __pyx_t_long_double_complex z;
      z.real = x;
      z.imag = y;
      return z;
    }
#endif

/* Arithmetic */
#if CYTHON_CCOMPLEX && (1) && (!0 || __cplusplus)
#else
    static CYTHON_INLINE int __Pyx_c_eq_long__double(__pyx_t_long_double_complex a, __pyx_t_long_double_complex b) {
       return (a.real == b.real) && (a.imag == b.imag);
    }
    static CYTHON_INLINE __pyx_t_long_double_complex __Pyx_c_sum_long__double(__pyx_t_long_double_complex a, __pyx_t_long_double_complex b) {
        __pyx_t_long_double_complex z;
        z.real = a.real + b.real;
        z.imag = a.imag + b.imag;
        return z;
    }
    static CYTHON_INLINE __pyx_t_long_double_complex __Pyx_c_diff_long__double(__pyx_t_long_double_complex a, __pyx_t_long_double_complex b) {
        __pyx_t_long_double_complex z;
        z.real = a.real - b.real;
        z.imag = a.imag - b.imag;
        return z;
    }
    static CYTHON_INLINE __pyx_t_long_double_complex __Pyx_c_prod_long__double(__pyx_t_long_double_complex a, __pyx_t_long_double_complex b) {
        __pyx_t_long_double_complex z;
        z.real = a.real * b.real - a.imag * b.imag;
        z.imag = a.real * b.imag + a.imag * b.real;
        return z;
    }
    #if 1
    static CYTHON_INLINE __pyx_t_long_double_complex __Pyx_c_quot_long__double(__pyx_t_long_double_complex a, __pyx_t_long_double_complex b) {
        if (b.imag == 0) {
            return __pyx_t_long_double_complex_from_parts(a.real / b.real, a.imag / b.real);
        } else if (fabsl(b.real) >= fabsl(b.imag)) {
            if (b.real == 0 && b.imag == 0) {
                return __pyx_t_long_double_complex_from_parts(a.real / b.real, a.imag / b.imag);
            } else {
                long double r = b.imag / b.real;
                long double s = (long double)(1.0) / (b.real + b.imag * r);
                return __pyx_t_long_double_complex_from_parts(
                    (a.real + a.imag * r) * s, (a.imag - a.real * r) * s);
            }
        } else {
            long double r = b.real / b.imag;
            long double s = (long double)(1.0) / (b.imag + b.real * r);
            return __pyx_t_long_double_complex_from_parts(
                (a.real * r + a.imag) * s, (a.imag * r - a.real) * s);
        }
    }
    #else
    static CYTHON_INLINE __pyx_t_long_double_complex __Pyx_c_quot_long__double(__pyx_t_long_double_complex a, __pyx_t_long_double_complex b) {
        if (b.imag == 0) {
            return __pyx_t_long_double_complex_from_parts(a.real / b.real, a.imag / b.real);
        } else {
            long double denom = b.real * b.real + b.imag * b.imag;
            return __pyx_t_long_double_complex_from_parts(
                (a.real * b.real + a.imag * b.imag) / denom,
                (a.imag * b.real - a.real * b.imag) / denom);
        }
    }
    #endif
    static CYTHON_INLINE __pyx_t_long_double_complex __Pyx_c_neg_long__double(__pyx_t_long_double_complex a) {
        __pyx_t_long_double_complex z;
        z.real = -a.real;
        z.imag = -a.imag;
        return z;
    }
    static CYTHON_INLINE int __Pyx_c_is_zero_long__double(__pyx_t_long_double_complex a) {
       return (a.real == 0) && (a.imag == 0);
    }
    static CYTHON_INLINE __pyx_t_long_double_complex __Pyx_c_conj_long__double(__pyx_t_long_double_complex a) {
        __pyx_t_long_double_complex z;
        z.real =  a.real;
        z.imag = -a.imag;
        return z;
    }
    #if 1
        static CYTHON_INLINE long double __Pyx_c_abs_long__double(__pyx_t_long_double_complex z) {
          #if !defined(HAVE_HYPOT) || defined(_MSC_VER)
            return sqrtl(z.real*z.real + z.imag*z.imag);
          #else
            return hypotl(z.real, z.imag);
          #endif
        }
        static CYTHON_INLINE __pyx_t_long_double_complex __Pyx_c_pow_long__double(__pyx_t_long_double_complex a, __pyx_t_long_double_complex b) {
            __pyx_t_long_double_complex z;
            long double r, lnr, theta, z_r, z_theta;
            if (b.imag == 0 && b.real == (int)b.real) {
                if (b.real < 0) {
                    long double denom = a.real * a.real + a.imag * a.imag;
                    a.real = a.real / denom;
                    a.imag = -a.imag / denom;
                    b.real = -b.real;
                }
                switch ((int)b.real) {
                    case 0:
                        z.real = 1;
                        z.imag = 0;
                        return z;
                    case 1:
                        return a;
                    case 2:
                        return __Pyx_c_prod_long__double(a, a);
                    case 3:
                        z = __Pyx_c_prod_long__double(a, a);
                        return __Pyx_c_prod_long__double(z, a);
                    case 4:
                        z = __Pyx_c_prod_long__double(a, a);
                        return __Pyx_c_prod_long__double(z, z);
                }
            }
            if (a.imag == 0) {
                if (a.real == 0) {
                    return a;
                } else if ((b.imag == 0) && (a.real >= 0)) {
                    z.real = powl(a.real, b.real);
                    z.imag = 0;
                    return z;
                } else if (a.real > 0) {
                    r = a.real;
                    theta = 0;
                } else {
                    r = -a.real;
                    theta = atan2l(0.0, -1.0);
                }
            } else {
                r = __Pyx_c_abs_long__double(a);
                theta = atan2l(a.imag, a.real);
            }
            lnr = logl(r);
            z_r = expl(lnr * b.real - theta * b.imag);
            z_theta = theta * b.real + lnr * b.imag;
            z.real = z_r * cosl(z_theta);
            z.imag = z_r * sinl(z_theta);
            return z;
        }
    #endif
#endif

/* CIntFromPy */
static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) {
#ifdef __Pyx_HAS_GCC_DIAGNOSTIC
#pragma GCC diagnostic push
#pragma GCC diagnostic ignored "-Wconversion"
#endif
    const int neg_one = (int) -1, const_zero = (int) 0;
#ifdef __Pyx_HAS_GCC_DIAGNOSTIC
#pragma GCC diagnostic pop
#endif
    const int is_unsigned = neg_one > const_zero;
#if PY_MAJOR_VERSION < 3
    if (likely(PyInt_Check(x))) {
        if ((sizeof(int) < sizeof(long))) {
            __PYX_VERIFY_RETURN_INT(int, long, PyInt_AS_LONG(x))
        } else {
            long val = PyInt_AS_LONG(x);
            if (is_unsigned && unlikely(val < 0)) {
                goto raise_neg_overflow;
            }
            return (int) val;
        }
    } else
#endif
    if (likely(PyLong_Check(x))) {
        if (is_unsigned) {
#if CYTHON_USE_PYLONG_INTERNALS
            if (unlikely(__Pyx_PyLong_IsNeg(x))) {
                goto raise_neg_overflow;
            } else if (__Pyx_PyLong_IsCompact(x)) {
                __PYX_VERIFY_RETURN_INT(int, __Pyx_compact_upylong, __Pyx_PyLong_CompactValueUnsigned(x))
            } else {
                const digit* digits = __Pyx_PyLong_Digits(x);
                assert(__Pyx_PyLong_DigitCount(x) > 1);
                switch (__Pyx_PyLong_DigitCount(x)) {
                    case 2:
                        if ((8 * sizeof(int) > 1 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(int) >= 2 * PyLong_SHIFT)) {
                                return (int) (((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]));
                            }
                        }
                        break;
                    case 3:
                        if ((8 * sizeof(int) > 2 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(int) >= 3 * PyLong_SHIFT)) {
                                return (int) (((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]));
                            }
                        }
                        break;
                    case 4:
                        if ((8 * sizeof(int) > 3 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(int) >= 4 * PyLong_SHIFT)) {
                                return (int) (((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]));
                            }
                        }
                        break;
                }
            }
#endif
#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX < 0x030C00A7
            if (unlikely(Py_SIZE(x) < 0)) {
                goto raise_neg_overflow;
            }
#else
            {
                int result = PyObject_RichCompareBool(x, Py_False, Py_LT);
                if (unlikely(result < 0))
                    return (int) -1;
                if (unlikely(result == 1))
                    goto raise_neg_overflow;
            }
#endif
            if ((sizeof(int) <= sizeof(unsigned long))) {
                __PYX_VERIFY_RETURN_INT_EXC(int, unsigned long, PyLong_AsUnsignedLong(x))
#ifdef HAVE_LONG_LONG
            } else if ((sizeof(int) <= sizeof(unsigned PY_LONG_LONG))) {
                __PYX_VERIFY_RETURN_INT_EXC(int, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x))
#endif
            }
        } else {
#if CYTHON_USE_PYLONG_INTERNALS
            if (__Pyx_PyLong_IsCompact(x)) {
                __PYX_VERIFY_RETURN_INT(int, __Pyx_compact_pylong, __Pyx_PyLong_CompactValue(x))
            } else {
                const digit* digits = __Pyx_PyLong_Digits(x);
                assert(__Pyx_PyLong_DigitCount(x) > 1);
                switch (__Pyx_PyLong_SignedDigitCount(x)) {
                    case -2:
                        if ((8 * sizeof(int) - 1 > 1 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(int) - 1 > 2 * PyLong_SHIFT)) {
                                return (int) (((int)-1)*(((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0])));
                            }
                        }
                        break;
                    case 2:
                        if ((8 * sizeof(int) > 1 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(int) - 1 > 2 * PyLong_SHIFT)) {
                                return (int) ((((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0])));
                            }
                        }
                        break;
                    case -3:
                        if ((8 * sizeof(int) - 1 > 2 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(int) - 1 > 3 * PyLong_SHIFT)) {
                                return (int) (((int)-1)*(((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])));
                            }
                        }
                        break;
                    case 3:
                        if ((8 * sizeof(int) > 2 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(int) - 1 > 3 * PyLong_SHIFT)) {
                                return (int) ((((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])));
                            }
                        }
                        break;
                    case -4:
                        if ((8 * sizeof(int) - 1 > 3 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(int) - 1 > 4 * PyLong_SHIFT)) {
                                return (int) (((int)-1)*(((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])));
                            }
                        }
                        break;
                    case 4:
                        if ((8 * sizeof(int) > 3 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(int) - 1 > 4 * PyLong_SHIFT)) {
                                return (int) ((((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])));
                            }
                        }
                        break;
                }
            }
#endif
            if ((sizeof(int) <= sizeof(long))) {
                __PYX_VERIFY_RETURN_INT_EXC(int, long, PyLong_AsLong(x))
#ifdef HAVE_LONG_LONG
            } else if ((sizeof(int) <= sizeof(PY_LONG_LONG))) {
                __PYX_VERIFY_RETURN_INT_EXC(int, PY_LONG_LONG, PyLong_AsLongLong(x))
#endif
            }
        }
        {
            int val;
            PyObject *v = __Pyx_PyNumber_IntOrLong(x);
#if PY_MAJOR_VERSION < 3
            if (likely(v) && !PyLong_Check(v)) {
                PyObject *tmp = v;
                v = PyNumber_Long(tmp);
                Py_DECREF(tmp);
            }
#endif
            if (likely(v)) {
                int ret = -1;
#if PY_VERSION_HEX < 0x030d0000 && !(CYTHON_COMPILING_IN_PYPY || CYTHON_COMPILING_IN_LIMITED_API) || defined(_PyLong_AsByteArray)
                int one = 1; int is_little = (int)*(unsigned char *)&one;
                unsigned char *bytes = (unsigned char *)&val;
                ret = _PyLong_AsByteArray((PyLongObject *)v,
                                           bytes, sizeof(val),
                                           is_little, !is_unsigned);
#else
                PyObject *stepval = NULL, *mask = NULL, *shift = NULL;
                int bits, remaining_bits, is_negative = 0;
                long idigit;
                int chunk_size = (sizeof(long) < 8) ? 30 : 62;
                if (unlikely(!PyLong_CheckExact(v))) {
                    PyObject *tmp = v;
                    v = PyNumber_Long(v);
                    assert(PyLong_CheckExact(v));
                    Py_DECREF(tmp);
                    if (unlikely(!v)) return (int) -1;
                }
#if CYTHON_COMPILING_IN_LIMITED_API && PY_VERSION_HEX < 0x030B0000
                if (Py_SIZE(x) == 0)
                    return (int) 0;
                is_negative = Py_SIZE(x) < 0;
#else
                {
                    int result = PyObject_RichCompareBool(x, Py_False, Py_LT);
                    if (unlikely(result < 0))
                        return (int) -1;
                    is_negative = result == 1;
                }
#endif
                if (is_unsigned && unlikely(is_negative)) {
                    goto raise_neg_overflow;
                } else if (is_negative) {
                    stepval = PyNumber_Invert(v);
                    if (unlikely(!stepval))
                        return (int) -1;
                } else {
                    stepval = __Pyx_NewRef(v);
                }
                val = (int) 0;
                mask = PyLong_FromLong((1L << chunk_size) - 1); if (unlikely(!mask)) goto done;
                shift = PyLong_FromLong(chunk_size); if (unlikely(!shift)) goto done;
                for (bits = 0; bits < (int) sizeof(int) * 8 - chunk_size; bits += chunk_size) {
                    PyObject *tmp, *digit;
                    digit = PyNumber_And(stepval, mask);
                    if (unlikely(!digit)) goto done;
                    idigit = PyLong_AsLong(digit);
                    Py_DECREF(digit);
                    if (unlikely(idigit < 0)) goto done;
                    tmp = PyNumber_Rshift(stepval, shift);
                    if (unlikely(!tmp)) goto done;
                    Py_DECREF(stepval); stepval = tmp;
                    val |= ((int) idigit) << bits;
                    #if CYTHON_COMPILING_IN_LIMITED_API && PY_VERSION_HEX < 0x030B0000
                    if (Py_SIZE(stepval) == 0)
                        goto unpacking_done;
                    #endif
                }
                idigit = PyLong_AsLong(stepval);
                if (unlikely(idigit < 0)) goto done;
                remaining_bits = ((int) sizeof(int) * 8) - bits - (is_unsigned ? 0 : 1);
                if (unlikely(idigit >= (1L << remaining_bits)))
                    goto raise_overflow;
                val |= ((int) idigit) << bits;
            #if CYTHON_COMPILING_IN_LIMITED_API && PY_VERSION_HEX < 0x030B0000
            unpacking_done:
            #endif
                if (!is_unsigned) {
                    if (unlikely(val & (((int) 1) << (sizeof(int) * 8 - 1))))
                        goto raise_overflow;
                    if (is_negative)
                        val = ~val;
                }
                ret = 0;
            done:
                Py_XDECREF(shift);
                Py_XDECREF(mask);
                Py_XDECREF(stepval);
#endif
                Py_DECREF(v);
                if (likely(!ret))
                    return val;
            }
            return (int) -1;
        }
    } else {
        int val;
        PyObject *tmp = __Pyx_PyNumber_IntOrLong(x);
        if (!tmp) return (int) -1;
        val = __Pyx_PyInt_As_int(tmp);
        Py_DECREF(tmp);
        return val;
    }
raise_overflow:
    PyErr_SetString(PyExc_OverflowError,
        "value too large to convert to int");
    return (int) -1;
raise_neg_overflow:
    PyErr_SetString(PyExc_OverflowError,
        "can't convert negative value to int");
    return (int) -1;
}

/* CIntToPy */
static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) {
#ifdef __Pyx_HAS_GCC_DIAGNOSTIC
#pragma GCC diagnostic push
#pragma GCC diagnostic ignored "-Wconversion"
#endif
    const int neg_one = (int) -1, const_zero = (int) 0;
#ifdef __Pyx_HAS_GCC_DIAGNOSTIC
#pragma GCC diagnostic pop
#endif
    const int is_unsigned = neg_one > const_zero;
    if (is_unsigned) {
        if (sizeof(int) < sizeof(long)) {
            return PyInt_FromLong((long) value);
        } else if (sizeof(int) <= sizeof(unsigned long)) {
            return PyLong_FromUnsignedLong((unsigned long) value);
#ifdef HAVE_LONG_LONG
        } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) {
            return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value);
#endif
        }
    } else {
        if (sizeof(int) <= sizeof(long)) {
            return PyInt_FromLong((long) value);
#ifdef HAVE_LONG_LONG
        } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) {
            return PyLong_FromLongLong((PY_LONG_LONG) value);
#endif
        }
    }
    {
        int one = 1; int little = (int)*(unsigned char *)&one;
        unsigned char *bytes = (unsigned char *)&value;
#if !CYTHON_COMPILING_IN_LIMITED_API && PY_VERSION_HEX < 0x030d0000
        return _PyLong_FromByteArray(bytes, sizeof(int),
                                     little, !is_unsigned);
#else
        PyObject *from_bytes, *result = NULL;
        PyObject *py_bytes = NULL, *arg_tuple = NULL, *kwds = NULL, *order_str = NULL;
        from_bytes = PyObject_GetAttrString((PyObject*)&PyLong_Type, "from_bytes");
        if (!from_bytes) return NULL;
        py_bytes = PyBytes_FromStringAndSize((char*)bytes, sizeof(int));
        if (!py_bytes) goto limited_bad;
        order_str = PyUnicode_FromString(little ? "little" : "big");
        if (!order_str) goto limited_bad;
        arg_tuple = PyTuple_Pack(2, py_bytes, order_str);
        if (!arg_tuple) goto limited_bad;
        if (!is_unsigned) {
            kwds = PyDict_New();
            if (!kwds) goto limited_bad;
            if (PyDict_SetItemString(kwds, "signed", __Pyx_NewRef(Py_True))) goto limited_bad;
        }
        result = PyObject_Call(from_bytes, arg_tuple, kwds);
        limited_bad:
        Py_XDECREF(kwds);
        Py_XDECREF(arg_tuple);
        Py_XDECREF(order_str);
        Py_XDECREF(py_bytes);
        Py_XDECREF(from_bytes);
        return result;
#endif
    }
}

/* FormatTypeName */
#if CYTHON_COMPILING_IN_LIMITED_API
static __Pyx_TypeName
__Pyx_PyType_GetName(PyTypeObject* tp)
{
    PyObject *name = __Pyx_PyObject_GetAttrStr((PyObject *)tp,
                                               __pyx_n_s_name);
    if (unlikely(name == NULL) || unlikely(!PyUnicode_Check(name))) {
        PyErr_Clear();
        Py_XDECREF(name);
        name = __Pyx_NewRef(__pyx_n_s__9);
    }
    return name;
}
#endif

/* CIntToPy */
static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) {
#ifdef __Pyx_HAS_GCC_DIAGNOSTIC
#pragma GCC diagnostic push
#pragma GCC diagnostic ignored "-Wconversion"
#endif
    const long neg_one = (long) -1, const_zero = (long) 0;
#ifdef __Pyx_HAS_GCC_DIAGNOSTIC
#pragma GCC diagnostic pop
#endif
    const int is_unsigned = neg_one > const_zero;
    if (is_unsigned) {
        if (sizeof(long) < sizeof(long)) {
            return PyInt_FromLong((long) value);
        } else if (sizeof(long) <= sizeof(unsigned long)) {
            return PyLong_FromUnsignedLong((unsigned long) value);
#ifdef HAVE_LONG_LONG
        } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) {
            return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value);
#endif
        }
    } else {
        if (sizeof(long) <= sizeof(long)) {
            return PyInt_FromLong((long) value);
#ifdef HAVE_LONG_LONG
        } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) {
            return PyLong_FromLongLong((PY_LONG_LONG) value);
#endif
        }
    }
    {
        int one = 1; int little = (int)*(unsigned char *)&one;
        unsigned char *bytes = (unsigned char *)&value;
#if !CYTHON_COMPILING_IN_LIMITED_API && PY_VERSION_HEX < 0x030d0000
        return _PyLong_FromByteArray(bytes, sizeof(long),
                                     little, !is_unsigned);
#else
        PyObject *from_bytes, *result = NULL;
        PyObject *py_bytes = NULL, *arg_tuple = NULL, *kwds = NULL, *order_str = NULL;
        from_bytes = PyObject_GetAttrString((PyObject*)&PyLong_Type, "from_bytes");
        if (!from_bytes) return NULL;
        py_bytes = PyBytes_FromStringAndSize((char*)bytes, sizeof(long));
        if (!py_bytes) goto limited_bad;
        order_str = PyUnicode_FromString(little ? "little" : "big");
        if (!order_str) goto limited_bad;
        arg_tuple = PyTuple_Pack(2, py_bytes, order_str);
        if (!arg_tuple) goto limited_bad;
        if (!is_unsigned) {
            kwds = PyDict_New();
            if (!kwds) goto limited_bad;
            if (PyDict_SetItemString(kwds, "signed", __Pyx_NewRef(Py_True))) goto limited_bad;
        }
        result = PyObject_Call(from_bytes, arg_tuple, kwds);
        limited_bad:
        Py_XDECREF(kwds);
        Py_XDECREF(arg_tuple);
        Py_XDECREF(order_str);
        Py_XDECREF(py_bytes);
        Py_XDECREF(from_bytes);
        return result;
#endif
    }
}

/* CIntFromPy */
static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) {
#ifdef __Pyx_HAS_GCC_DIAGNOSTIC
#pragma GCC diagnostic push
#pragma GCC diagnostic ignored "-Wconversion"
#endif
    const long neg_one = (long) -1, const_zero = (long) 0;
#ifdef __Pyx_HAS_GCC_DIAGNOSTIC
#pragma GCC diagnostic pop
#endif
    const int is_unsigned = neg_one > const_zero;
#if PY_MAJOR_VERSION < 3
    if (likely(PyInt_Check(x))) {
        if ((sizeof(long) < sizeof(long))) {
            __PYX_VERIFY_RETURN_INT(long, long, PyInt_AS_LONG(x))
        } else {
            long val = PyInt_AS_LONG(x);
            if (is_unsigned && unlikely(val < 0)) {
                goto raise_neg_overflow;
            }
            return (long) val;
        }
    } else
#endif
    if (likely(PyLong_Check(x))) {
        if (is_unsigned) {
#if CYTHON_USE_PYLONG_INTERNALS
            if (unlikely(__Pyx_PyLong_IsNeg(x))) {
                goto raise_neg_overflow;
            } else if (__Pyx_PyLong_IsCompact(x)) {
                __PYX_VERIFY_RETURN_INT(long, __Pyx_compact_upylong, __Pyx_PyLong_CompactValueUnsigned(x))
            } else {
                const digit* digits = __Pyx_PyLong_Digits(x);
                assert(__Pyx_PyLong_DigitCount(x) > 1);
                switch (__Pyx_PyLong_DigitCount(x)) {
                    case 2:
                        if ((8 * sizeof(long) > 1 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(long) >= 2 * PyLong_SHIFT)) {
                                return (long) (((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]));
                            }
                        }
                        break;
                    case 3:
                        if ((8 * sizeof(long) > 2 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(long) >= 3 * PyLong_SHIFT)) {
                                return (long) (((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]));
                            }
                        }
                        break;
                    case 4:
                        if ((8 * sizeof(long) > 3 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(long) >= 4 * PyLong_SHIFT)) {
                                return (long) (((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]));
                            }
                        }
                        break;
                }
            }
#endif
#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX < 0x030C00A7
            if (unlikely(Py_SIZE(x) < 0)) {
                goto raise_neg_overflow;
            }
#else
            {
                int result = PyObject_RichCompareBool(x, Py_False, Py_LT);
                if (unlikely(result < 0))
                    return (long) -1;
                if (unlikely(result == 1))
                    goto raise_neg_overflow;
            }
#endif
            if ((sizeof(long) <= sizeof(unsigned long))) {
                __PYX_VERIFY_RETURN_INT_EXC(long, unsigned long, PyLong_AsUnsignedLong(x))
#ifdef HAVE_LONG_LONG
            } else if ((sizeof(long) <= sizeof(unsigned PY_LONG_LONG))) {
                __PYX_VERIFY_RETURN_INT_EXC(long, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x))
#endif
            }
        } else {
#if CYTHON_USE_PYLONG_INTERNALS
            if (__Pyx_PyLong_IsCompact(x)) {
                __PYX_VERIFY_RETURN_INT(long, __Pyx_compact_pylong, __Pyx_PyLong_CompactValue(x))
            } else {
                const digit* digits = __Pyx_PyLong_Digits(x);
                assert(__Pyx_PyLong_DigitCount(x) > 1);
                switch (__Pyx_PyLong_SignedDigitCount(x)) {
                    case -2:
                        if ((8 * sizeof(long) - 1 > 1 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(long) - 1 > 2 * PyLong_SHIFT)) {
                                return (long) (((long)-1)*(((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0])));
                            }
                        }
                        break;
                    case 2:
                        if ((8 * sizeof(long) > 1 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(long) - 1 > 2 * PyLong_SHIFT)) {
                                return (long) ((((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0])));
                            }
                        }
                        break;
                    case -3:
                        if ((8 * sizeof(long) - 1 > 2 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(long) - 1 > 3 * PyLong_SHIFT)) {
                                return (long) (((long)-1)*(((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])));
                            }
                        }
                        break;
                    case 3:
                        if ((8 * sizeof(long) > 2 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(long) - 1 > 3 * PyLong_SHIFT)) {
                                return (long) ((((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])));
                            }
                        }
                        break;
                    case -4:
                        if ((8 * sizeof(long) - 1 > 3 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(long) - 1 > 4 * PyLong_SHIFT)) {
                                return (long) (((long)-1)*(((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])));
                            }
                        }
                        break;
                    case 4:
                        if ((8 * sizeof(long) > 3 * PyLong_SHIFT)) {
                            if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) {
                                __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
                            } else if ((8 * sizeof(long) - 1 > 4 * PyLong_SHIFT)) {
                                return (long) ((((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])));
                            }
                        }
                        break;
                }
            }
#endif
            if ((sizeof(long) <= sizeof(long))) {
                __PYX_VERIFY_RETURN_INT_EXC(long, long, PyLong_AsLong(x))
#ifdef HAVE_LONG_LONG
            } else if ((sizeof(long) <= sizeof(PY_LONG_LONG))) {
                __PYX_VERIFY_RETURN_INT_EXC(long, PY_LONG_LONG, PyLong_AsLongLong(x))
#endif
            }
        }
        {
            long val;
            PyObject *v = __Pyx_PyNumber_IntOrLong(x);
#if PY_MAJOR_VERSION < 3
            if (likely(v) && !PyLong_Check(v)) {
                PyObject *tmp = v;
                v = PyNumber_Long(tmp);
                Py_DECREF(tmp);
            }
#endif
            if (likely(v)) {
                int ret = -1;
#if PY_VERSION_HEX < 0x030d0000 && !(CYTHON_COMPILING_IN_PYPY || CYTHON_COMPILING_IN_LIMITED_API) || defined(_PyLong_AsByteArray)
                int one = 1; int is_little = (int)*(unsigned char *)&one;
                unsigned char *bytes = (unsigned char *)&val;
                ret = _PyLong_AsByteArray((PyLongObject *)v,
                                           bytes, sizeof(val),
                                           is_little, !is_unsigned);
#else
                PyObject *stepval = NULL, *mask = NULL, *shift = NULL;
                int bits, remaining_bits, is_negative = 0;
                long idigit;
                int chunk_size = (sizeof(long) < 8) ? 30 : 62;
                if (unlikely(!PyLong_CheckExact(v))) {
                    PyObject *tmp = v;
                    v = PyNumber_Long(v);
                    assert(PyLong_CheckExact(v));
                    Py_DECREF(tmp);
                    if (unlikely(!v)) return (long) -1;
                }
#if CYTHON_COMPILING_IN_LIMITED_API && PY_VERSION_HEX < 0x030B0000
                if (Py_SIZE(x) == 0)
                    return (long) 0;
                is_negative = Py_SIZE(x) < 0;
#else
                {
                    int result = PyObject_RichCompareBool(x, Py_False, Py_LT);
                    if (unlikely(result < 0))
                        return (long) -1;
                    is_negative = result == 1;
                }
#endif
                if (is_unsigned && unlikely(is_negative)) {
                    goto raise_neg_overflow;
                } else if (is_negative) {
                    stepval = PyNumber_Invert(v);
                    if (unlikely(!stepval))
                        return (long) -1;
                } else {
                    stepval = __Pyx_NewRef(v);
                }
                val = (long) 0;
                mask = PyLong_FromLong((1L << chunk_size) - 1); if (unlikely(!mask)) goto done;
                shift = PyLong_FromLong(chunk_size); if (unlikely(!shift)) goto done;
                for (bits = 0; bits < (int) sizeof(long) * 8 - chunk_size; bits += chunk_size) {
                    PyObject *tmp, *digit;
                    digit = PyNumber_And(stepval, mask);
                    if (unlikely(!digit)) goto done;
                    idigit = PyLong_AsLong(digit);
                    Py_DECREF(digit);
                    if (unlikely(idigit < 0)) goto done;
                    tmp = PyNumber_Rshift(stepval, shift);
                    if (unlikely(!tmp)) goto done;
                    Py_DECREF(stepval); stepval = tmp;
                    val |= ((long) idigit) << bits;
                    #if CYTHON_COMPILING_IN_LIMITED_API && PY_VERSION_HEX < 0x030B0000
                    if (Py_SIZE(stepval) == 0)
                        goto unpacking_done;
                    #endif
                }
                idigit = PyLong_AsLong(stepval);
                if (unlikely(idigit < 0)) goto done;
                remaining_bits = ((int) sizeof(long) * 8) - bits - (is_unsigned ? 0 : 1);
                if (unlikely(idigit >= (1L << remaining_bits)))
                    goto raise_overflow;
                val |= ((long) idigit) << bits;
            #if CYTHON_COMPILING_IN_LIMITED_API && PY_VERSION_HEX < 0x030B0000
            unpacking_done:
            #endif
                if (!is_unsigned) {
                    if (unlikely(val & (((long) 1) << (sizeof(long) * 8 - 1))))
                        goto raise_overflow;
                    if (is_negative)
                        val = ~val;
                }
                ret = 0;
            done:
                Py_XDECREF(shift);
                Py_XDECREF(mask);
                Py_XDECREF(stepval);
#endif
                Py_DECREF(v);
                if (likely(!ret))
                    return val;
            }
            return (long) -1;
        }
    } else {
        long val;
        PyObject *tmp = __Pyx_PyNumber_IntOrLong(x);
        if (!tmp) return (long) -1;
        val = __Pyx_PyInt_As_long(tmp);
        Py_DECREF(tmp);
        return val;
    }
raise_overflow:
    PyErr_SetString(PyExc_OverflowError,
        "value too large to convert to long");
    return (long) -1;
raise_neg_overflow:
    PyErr_SetString(PyExc_OverflowError,
        "can't convert negative value to long");
    return (long) -1;
}

/* FastTypeChecks */
#if CYTHON_COMPILING_IN_CPYTHON
static int __Pyx_InBases(PyTypeObject *a, PyTypeObject *b) {
    while (a) {
        a = __Pyx_PyType_GetSlot(a, tp_base, PyTypeObject*);
        if (a == b)
            return 1;
    }
    return b == &PyBaseObject_Type;
}
static CYTHON_INLINE int __Pyx_IsSubtype(PyTypeObject *a, PyTypeObject *b) {
    PyObject *mro;
    if (a == b) return 1;
    mro = a->tp_mro;
    if (likely(mro)) {
        Py_ssize_t i, n;
        n = PyTuple_GET_SIZE(mro);
        for (i = 0; i < n; i++) {
            if (PyTuple_GET_ITEM(mro, i) == (PyObject *)b)
                return 1;
        }
        return 0;
    }
    return __Pyx_InBases(a, b);
}
static CYTHON_INLINE int __Pyx_IsAnySubtype2(PyTypeObject *cls, PyTypeObject *a, PyTypeObject *b) {
    PyObject *mro;
    if (cls == a || cls == b) return 1;
    mro = cls->tp_mro;
    if (likely(mro)) {
        Py_ssize_t i, n;
        n = PyTuple_GET_SIZE(mro);
        for (i = 0; i < n; i++) {
            PyObject *base = PyTuple_GET_ITEM(mro, i);
            if (base == (PyObject *)a || base == (PyObject *)b)
                return 1;
        }
        return 0;
    }
    return __Pyx_InBases(cls, a) || __Pyx_InBases(cls, b);
}
#if PY_MAJOR_VERSION == 2
static int __Pyx_inner_PyErr_GivenExceptionMatches2(PyObject *err, PyObject* exc_type1, PyObject* exc_type2) {
    PyObject *exception, *value, *tb;
    int res;
    __Pyx_PyThreadState_declare
    __Pyx_PyThreadState_assign
    __Pyx_ErrFetch(&exception, &value, &tb);
    res = exc_type1 ? PyObject_IsSubclass(err, exc_type1) : 0;
    if (unlikely(res == -1)) {
        PyErr_WriteUnraisable(err);
        res = 0;
    }
    if (!res) {
        res = PyObject_IsSubclass(err, exc_type2);
        if (unlikely(res == -1)) {
            PyErr_WriteUnraisable(err);
            res = 0;
        }
    }
    __Pyx_ErrRestore(exception, value, tb);
    return res;
}
#else
static CYTHON_INLINE int __Pyx_inner_PyErr_GivenExceptionMatches2(PyObject *err, PyObject* exc_type1, PyObject *exc_type2) {
    if (exc_type1) {
        return __Pyx_IsAnySubtype2((PyTypeObject*)err, (PyTypeObject*)exc_type1, (PyTypeObject*)exc_type2);
    } else {
        return __Pyx_IsSubtype((PyTypeObject*)err, (PyTypeObject*)exc_type2);
    }
}
#endif
static int __Pyx_PyErr_GivenExceptionMatchesTuple(PyObject *exc_type, PyObject *tuple) {
    Py_ssize_t i, n;
    assert(PyExceptionClass_Check(exc_type));
    n = PyTuple_GET_SIZE(tuple);
#if PY_MAJOR_VERSION >= 3
    for (i=0; i<n; i++) {
        if (exc_type == PyTuple_GET_ITEM(tuple, i)) return 1;
    }
#endif
    for (i=0; i<n; i++) {
        PyObject *t = PyTuple_GET_ITEM(tuple, i);
        #if PY_MAJOR_VERSION < 3
        if (likely(exc_type == t)) return 1;
        #endif
        if (likely(PyExceptionClass_Check(t))) {
            if (__Pyx_inner_PyErr_GivenExceptionMatches2(exc_type, NULL, t)) return 1;
        } else {
        }
    }
    return 0;
}
static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches(PyObject *err, PyObject* exc_type) {
    if (likely(err == exc_type)) return 1;
    if (likely(PyExceptionClass_Check(err))) {
        if (likely(PyExceptionClass_Check(exc_type))) {
            return __Pyx_inner_PyErr_GivenExceptionMatches2(err, NULL, exc_type);
        } else if (likely(PyTuple_Check(exc_type))) {
            return __Pyx_PyErr_GivenExceptionMatchesTuple(err, exc_type);
        } else {
        }
    }
    return PyErr_GivenExceptionMatches(err, exc_type);
}
static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches2(PyObject *err, PyObject *exc_type1, PyObject *exc_type2) {
    assert(PyExceptionClass_Check(exc_type1));
    assert(PyExceptionClass_Check(exc_type2));
    if (likely(err == exc_type1 || err == exc_type2)) return 1;
    if (likely(PyExceptionClass_Check(err))) {
        return __Pyx_inner_PyErr_GivenExceptionMatches2(err, exc_type1, exc_type2);
    }
    return (PyErr_GivenExceptionMatches(err, exc_type1) || PyErr_GivenExceptionMatches(err, exc_type2));
}
#endif

/* CheckBinaryVersion */
static unsigned long __Pyx_get_runtime_version(void) {
#if __PYX_LIMITED_VERSION_HEX >= 0x030B00A4
    return Py_Version & ~0xFFUL;
#else
    const char* rt_version = Py_GetVersion();
    unsigned long version = 0;
    unsigned long factor = 0x01000000UL;
    unsigned int digit = 0;
    int i = 0;
    while (factor) {
        while ('0' <= rt_version[i] && rt_version[i] <= '9') {
            digit = digit * 10 + (unsigned int) (rt_version[i] - '0');
            ++i;
        }
        version += factor * digit;
        if (rt_version[i] != '.')
            break;
        digit = 0;
        factor >>= 8;
        ++i;
    }
    return version;
#endif
}
static int __Pyx_check_binary_version(unsigned long ct_version, unsigned long rt_version, int allow_newer) {
    const unsigned long MAJOR_MINOR = 0xFFFF0000UL;
    if ((rt_version & MAJOR_MINOR) == (ct_version & MAJOR_MINOR))
        return 0;
    if (likely(allow_newer && (rt_version & MAJOR_MINOR) > (ct_version & MAJOR_MINOR)))
        return 1;
    {
        char message[200];
        PyOS_snprintf(message, sizeof(message),
                      "compile time Python version %d.%d "
                      "of module '%.100s' "
                      "%s "
                      "runtime version %d.%d",
                       (int) (ct_version >> 24), (int) ((ct_version >> 16) & 0xFF),
                       __Pyx_MODULE_NAME,
                       (allow_newer) ? "was newer than" : "does not match",
                       (int) (rt_version >> 24), (int) ((rt_version >> 16) & 0xFF)
       );
        return PyErr_WarnEx(NULL, message, 1);
    }
}

/* FunctionExport */
static int __Pyx_ExportFunction(const char *name, void (*f)(void), const char *sig) {
    PyObject *d = 0;
    PyObject *cobj = 0;
    union {
        void (*fp)(void);
        void *p;
    } tmp;
    d = PyObject_GetAttrString(__pyx_m, (char *)"__pyx_capi__");
    if (!d) {
        PyErr_Clear();
        d = PyDict_New();
        if (!d)
            goto bad;
        Py_INCREF(d);
        if (PyModule_AddObject(__pyx_m, (char *)"__pyx_capi__", d) < 0)
            goto bad;
    }
    tmp.fp = f;
    cobj = PyCapsule_New(tmp.p, sig, 0);
    if (!cobj)
        goto bad;
    if (PyDict_SetItemString(d, name, cobj) < 0)
        goto bad;
    Py_DECREF(cobj);
    Py_DECREF(d);
    return 0;
bad:
    Py_XDECREF(cobj);
    Py_XDECREF(d);
    return -1;
}

/* FunctionImport */
#ifndef __PYX_HAVE_RT_ImportFunction_3_0_10
#define __PYX_HAVE_RT_ImportFunction_3_0_10
static int __Pyx_ImportFunction_3_0_10(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
    PyObject *d = 0;
    PyObject *cobj = 0;
    union {
        void (*fp)(void);
        void *p;
    } tmp;
    d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
    if (!d)
        goto bad;
    cobj = PyDict_GetItemString(d, funcname);
    if (!cobj) {
        PyErr_Format(PyExc_ImportError,
            "%.200s does not export expected C function %.200s",
                PyModule_GetName(module), funcname);
        goto bad;
    }
    if (!PyCapsule_IsValid(cobj, sig)) {
        PyErr_Format(PyExc_TypeError,
            "C function %.200s.%.200s has wrong signature (expected %.500s, got %.500s)",
             PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
        goto bad;
    }
    tmp.p = PyCapsule_GetPointer(cobj, sig);
    *f = tmp.fp;
    if (!(*f))
        goto bad;
    Py_DECREF(d);
    return 0;
bad:
    Py_XDECREF(d);
    return -1;
}
#endif

/* InitStrings */
#if PY_MAJOR_VERSION >= 3
static int __Pyx_InitString(__Pyx_StringTabEntry t, PyObject **str) {
    if (t.is_unicode | t.is_str) {
        if (t.intern) {
            *str = PyUnicode_InternFromString(t.s);
        } else if (t.encoding) {
            *str = PyUnicode_Decode(t.s, t.n - 1, t.encoding, NULL);
        } else {
            *str = PyUnicode_FromStringAndSize(t.s, t.n - 1);
        }
    } else {
        *str = PyBytes_FromStringAndSize(t.s, t.n - 1);
    }
    if (!*str)
        return -1;
    if (PyObject_Hash(*str) == -1)
        return -1;
    return 0;
}
#endif
static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
    while (t->p) {
        #if PY_MAJOR_VERSION >= 3
        __Pyx_InitString(*t, t->p);
        #else
        if (t->is_unicode) {
            *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
        } else if (t->intern) {
            *t->p = PyString_InternFromString(t->s);
        } else {
            *t->p = PyString_FromStringAndSize(t->s, t->n - 1);
        }
        if (!*t->p)
            return -1;
        if (PyObject_Hash(*t->p) == -1)
            return -1;
        #endif
        ++t;
    }
    return 0;
}

#include <string.h>
static CYTHON_INLINE Py_ssize_t __Pyx_ssize_strlen(const char *s) {
    size_t len = strlen(s);
    if (unlikely(len > (size_t) PY_SSIZE_T_MAX)) {
        PyErr_SetString(PyExc_OverflowError, "byte string is too long");
        return -1;
    }
    return (Py_ssize_t) len;
}
static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char* c_str) {
    Py_ssize_t len = __Pyx_ssize_strlen(c_str);
    if (unlikely(len < 0)) return NULL;
    return __Pyx_PyUnicode_FromStringAndSize(c_str, len);
}
static CYTHON_INLINE PyObject* __Pyx_PyByteArray_FromString(const char* c_str) {
    Py_ssize_t len = __Pyx_ssize_strlen(c_str);
    if (unlikely(len < 0)) return NULL;
    return PyByteArray_FromStringAndSize(c_str, len);
}
static CYTHON_INLINE const char* __Pyx_PyObject_AsString(PyObject* o) {
    Py_ssize_t ignore;
    return __Pyx_PyObject_AsStringAndSize(o, &ignore);
}
#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT
#if !CYTHON_PEP393_ENABLED
static const char* __Pyx_PyUnicode_AsStringAndSize(PyObject* o, Py_ssize_t *length) {
    char* defenc_c;
    PyObject* defenc = _PyUnicode_AsDefaultEncodedString(o, NULL);
    if (!defenc) return NULL;
    defenc_c = PyBytes_AS_STRING(defenc);
#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII
    {
        char* end = defenc_c + PyBytes_GET_SIZE(defenc);
        char* c;
        for (c = defenc_c; c < end; c++) {
            if ((unsigned char) (*c) >= 128) {
                PyUnicode_AsASCIIString(o);
                return NULL;
            }
        }
    }
#endif
    *length = PyBytes_GET_SIZE(defenc);
    return defenc_c;
}
#else
static CYTHON_INLINE const char* __Pyx_PyUnicode_AsStringAndSize(PyObject* o, Py_ssize_t *length) {
    if (unlikely(__Pyx_PyUnicode_READY(o) == -1)) return NULL;
#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII
    if (likely(PyUnicode_IS_ASCII(o))) {
        *length = PyUnicode_GET_LENGTH(o);
        return PyUnicode_AsUTF8(o);
    } else {
        PyUnicode_AsASCIIString(o);
        return NULL;
    }
#else
    return PyUnicode_AsUTF8AndSize(o, length);
#endif
}
#endif
#endif
static CYTHON_INLINE const char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) {
#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT
    if (
#if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII
            __Pyx_sys_getdefaultencoding_not_ascii &&
#endif
            PyUnicode_Check(o)) {
        return __Pyx_PyUnicode_AsStringAndSize(o, length);
    } else
#endif
#if (!CYTHON_COMPILING_IN_PYPY && !CYTHON_COMPILING_IN_LIMITED_API) || (defined(PyByteArray_AS_STRING) && defined(PyByteArray_GET_SIZE))
    if (PyByteArray_Check(o)) {
        *length = PyByteArray_GET_SIZE(o);
        return PyByteArray_AS_STRING(o);
    } else
#endif
    {
        char* result;
        int r = PyBytes_AsStringAndSize(o, &result, length);
        if (unlikely(r < 0)) {
            return NULL;
        } else {
            return result;
        }
    }
}
static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
   int is_true = x == Py_True;
   if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
   else return PyObject_IsTrue(x);
}
static CYTHON_INLINE int __Pyx_PyObject_IsTrueAndDecref(PyObject* x) {
    int retval;
    if (unlikely(!x)) return -1;
    retval = __Pyx_PyObject_IsTrue(x);
    Py_DECREF(x);
    return retval;
}
static PyObject* __Pyx_PyNumber_IntOrLongWrongResultType(PyObject* result, const char* type_name) {
    __Pyx_TypeName result_type_name = __Pyx_PyType_GetName(Py_TYPE(result));
#if PY_MAJOR_VERSION >= 3
    if (PyLong_Check(result)) {
        if (PyErr_WarnFormat(PyExc_DeprecationWarning, 1,
                "__int__ returned non-int (type " __Pyx_FMT_TYPENAME ").  "
                "The ability to return an instance of a strict subclass of int is deprecated, "
                "and may be removed in a future version of Python.",
                result_type_name)) {
            __Pyx_DECREF_TypeName(result_type_name);
            Py_DECREF(result);
            return NULL;
        }
        __Pyx_DECREF_TypeName(result_type_name);
        return result;
    }
#endif
    PyErr_Format(PyExc_TypeError,
                 "__%.4s__ returned non-%.4s (type " __Pyx_FMT_TYPENAME ")",
                 type_name, type_name, result_type_name);
    __Pyx_DECREF_TypeName(result_type_name);
    Py_DECREF(result);
    return NULL;
}
static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x) {
#if CYTHON_USE_TYPE_SLOTS
  PyNumberMethods *m;
#endif
  const char *name = NULL;
  PyObject *res = NULL;
#if PY_MAJOR_VERSION < 3
  if (likely(PyInt_Check(x) || PyLong_Check(x)))
#else
  if (likely(PyLong_Check(x)))
#endif
    return __Pyx_NewRef(x);
#if CYTHON_USE_TYPE_SLOTS
  m = Py_TYPE(x)->tp_as_number;
  #if PY_MAJOR_VERSION < 3
  if (m && m->nb_int) {
    name = "int";
    res = m->nb_int(x);
  }
  else if (m && m->nb_long) {
    name = "long";
    res = m->nb_long(x);
  }
  #else
  if (likely(m && m->nb_int)) {
    name = "int";
    res = m->nb_int(x);
  }
  #endif
#else
  if (!PyBytes_CheckExact(x) && !PyUnicode_CheckExact(x)) {
    res = PyNumber_Int(x);
  }
#endif
  if (likely(res)) {
#if PY_MAJOR_VERSION < 3
    if (unlikely(!PyInt_Check(res) && !PyLong_Check(res))) {
#else
    if (unlikely(!PyLong_CheckExact(res))) {
#endif
        return __Pyx_PyNumber_IntOrLongWrongResultType(res, name);
    }
  }
  else if (!PyErr_Occurred()) {
    PyErr_SetString(PyExc_TypeError,
                    "an integer is required");
  }
  return res;
}
static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
  Py_ssize_t ival;
  PyObject *x;
#if PY_MAJOR_VERSION < 3
  if (likely(PyInt_CheckExact(b))) {
    if (sizeof(Py_ssize_t) >= sizeof(long))
        return PyInt_AS_LONG(b);
    else
        return PyInt_AsSsize_t(b);
  }
#endif
  if (likely(PyLong_CheckExact(b))) {
    #if CYTHON_USE_PYLONG_INTERNALS
    if (likely(__Pyx_PyLong_IsCompact(b))) {
        return __Pyx_PyLong_CompactValue(b);
    } else {
      const digit* digits = __Pyx_PyLong_Digits(b);
      const Py_ssize_t size = __Pyx_PyLong_SignedDigitCount(b);
      switch (size) {
         case 2:
           if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) {
             return (Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]));
           }
           break;
         case -2:
           if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) {
             return -(Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]));
           }
           break;
         case 3:
           if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) {
             return (Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]));
           }
           break;
         case -3:
           if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) {
             return -(Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]));
           }
           break;
         case 4:
           if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) {
             return (Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]));
           }
           break;
         case -4:
           if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) {
             return -(Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]));
           }
           break;
      }
    }
    #endif
    return PyLong_AsSsize_t(b);
  }
  x = PyNumber_Index(b);
  if (!x) return -1;
  ival = PyInt_AsSsize_t(x);
  Py_DECREF(x);
  return ival;
}
static CYTHON_INLINE Py_hash_t __Pyx_PyIndex_AsHash_t(PyObject* o) {
  if (sizeof(Py_hash_t) == sizeof(Py_ssize_t)) {
    return (Py_hash_t) __Pyx_PyIndex_AsSsize_t(o);
#if PY_MAJOR_VERSION < 3
  } else if (likely(PyInt_CheckExact(o))) {
    return PyInt_AS_LONG(o);
#endif
  } else {
    Py_ssize_t ival;
    PyObject *x;
    x = PyNumber_Index(o);
    if (!x) return -1;
    ival = PyInt_AsLong(x);
    Py_DECREF(x);
    return ival;
  }
}
static CYTHON_INLINE PyObject * __Pyx_PyBool_FromLong(long b) {
  return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False);
}
static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
    return PyInt_FromSize_t(ival);
}


/* #### Code section: utility_code_pragmas_end ### */
#ifdef _MSC_VER
#pragma warning( pop )
#endif



/* #### Code section: end ### */
#endif /* Py_PYTHON_H */
