# Ver. 20170404						登録に必須		DFAST自動補完の値
# oprnapi:name	 oprnapi:description						openapi:pattern	
# name	description	qualifier	feature	entry	type	mss_required	pattern	default_value
#---------- KEYWORD ----------								
keyword	Keyword	keyword	KEYWORD	COMMON	string	FALSE	(STANDARD_DRAFT)|(HIGH_QUALITY_DRAFT)|(IMPROVED_HIGH_QUALITY_DRAFT)|(NON_CONTIGUOUS_FINISHED)	
#---------- DBLINK ----------								
bioproject	BioProject ID	project	DBLINK	COMMON	string	TRUE	PRJ[A-Z]{1,2}\d{4,8}	
biosample	BioSample ID	biosample	DBLINK	COMMON	string	TRUE	SAM[A-Z]{1,2}\d{4,8}	
sra	SRA accession	sequence read archive	DBLINK	COMMON	array	FALSE	[DES]RR\d{6}	
#								
#---------- SUBMITTER ----------								
submitter	Submitter	ab_name	SUBMITTER	COMMON	array	TRUE	[A-Za-z0-9',\.\-]*	
consrtm	Consortium	consrtm	SUBMITTER	COMMON	string	FALSE	[A-Za-z0-9',@#:_ \(\)\.\-]*	
contact	Contact Person	contact	SUBMITTER	COMMON	string	TRUE	[A-Za-z0-9 ',\.\-]*	
email	Email	email	SUBMITTER	COMMON	string	TRUE	[A-Za-z0-9_@,\.\-]*	
url	URL	url	SUBMITTER	COMMON	string	FALSE	[^ `\\<>]*	
phone	Phone	phone	SUBMITTER	COMMON	string	TRUE	[\d\-]{0,16}	
phext	Phone ext.	phext	SUBMITTER	COMMON	string	FALSE	[\d\-]{0,16}	
fax	Fax	fax	SUBMITTER	COMMON	string	TRUE	[\d\-]{0,16}	
institute	Institute	institute	SUBMITTER	COMMON	string	TRUE	[A-Za-z0-9',@#:_ \(\)\.\-]*	
department	Department	department	SUBMITTER	COMMON	string	FALSE	[A-Za-z0-9',@#:_ \(\)\.\-]*	
country	Country	country	SUBMITTER	COMMON	string	TRUE	[A-Za-z0-9',@#:_ \(\)\.\-]*	
state	State	state	SUBMITTER	COMMON	string	FALSE	[A-Za-z0-9',@#:_ \(\)\.\-]*	
city	City	city	SUBMITTER	COMMON	string	TRUE	[A-Za-z0-9',@#:_ \(\)\.\-]*	
street	Street	street	SUBMITTER	COMMON	string	TRUE	[A-Za-z0-9',@#:_ \(\)\.\-]*	
zip	Zip	zip	SUBMITTER	COMMON	string	TRUE	[A-Za-z0-9\-]{0,16}	
#								
#---------- Reference ----------								
reference	Reference Title	title	REFERENCE	COMMON	string	TRUE	[^`\\]*	
author	Author	ab_name	REFERENCE	COMMON	array	TRUE	[A-Za-z0-9',\.\-]*	
ref_consrtm	Consortium	consrtm	REFERENCE	COMMON	string	FALSE	[A-Za-z0-9',@#:_ \(\)\.\-]*	
status	Status	status	REFERENCE	COMMON	string	TRUE	(Unpublished)|(In press)|(Published)	Unpublished
year	Year	year	REFERENCE	COMMON	string	TRUE	\d{4}	
journal	Journal	journal	REFERENCE	COMMON	string	FALSE	[^`<>\\]*	
volume	Volume	volume	REFERENCE	COMMON	string	FALSE	[A-Za-z0-9\-]{0,8}	
start_page	Start Page	start_page	REFERENCE	COMMON	string	FALSE	[A-Za-z0-9\-]{0,8}	
end_page	End Page	end_page	REFERENCE	COMMON	string	FALSE	[A-Za-z0-9\-]{0,8}	
#								
#---------- DATE ----------								
hold_date	Hold Date	hold_date	DATE	COMMON	string	FALSE	\d{8}	
#								
#---------- COMMENT ----------								
comment	Comment	line	COMMENT	COMMON	array	FALSE	[^`<>\\]*	
#								
#---------- ST_COMMENT ----------								
tagset_id	Tag set ID	tagset_id	ST_COMMENT	COMMON	string	TRUE	Genome\-Assembly\-Data	Genome-Assembly-Data
assembly_method	Assembly Method	Assembly Method	ST_COMMENT	COMMON	string	TRUE	[A-Za-z0-9 ,_;:\[\]\(\)\-\.]+	
genome_coverage	Genome Coverage	Genome Coverage	ST_COMMENT	COMMON	string	TRUE	\d+[Xx]	
sequencing_technology	Sequencing Technology	Sequencing Technology	ST_COMMENT	COMMON	string	TRUE	[A-Za-z0-9 ,_;:\[\]\(\)\-\.]+	
#															
#---------- source ----------															
organism	organism	organism	source	COMMON/ENTRY	string	TRUE	[A-Za-z0-9_, \[\]\(\)\-\.]+							
strain	strain	strain	source	COMMON/ENTRY	string	TRUE	[A-Za-z0-9 ,_\[\]\(\)\-\.]+							
mol_type	mol_type	mol_type	source	COMMON/ENTRY	string	TRUE	(genomic DNA)|(genomic RNA)|(mRNA)|(tRNA)|(rRNA)|(other RNA)|(other DNA)|(transcribed RNA)|(viral cRNA)|(unassigned DNA)|(unassigned RNA)		private					
ff_definition	ff_definition	ff_definition	source	COMMON/ENTRY	string	FALSE	[A-Za-z0-9 @:,_\[\]\(\)\-\.]+							
#
#---------- source extended ----------															
source_note	note	note	source	EX_SOURCE	array	FALSE	.*							
culture_collection	Culture Collection	culture_collection	source	EX_SOURCE	string	FALSE	[A-Za-z0-9 :,_\[\]\(\)\-\.]+							
cultureCollection	Culture Collection (synonym for culture_collection)	culture_collection	source	EX_SOURCE	string	FALSE	[A-Za-z0-9 :,_\[\]\(\)\-\.]+							
collection_date	collection_date	collection_date	source	EX_SOURCE	string	FALSE	.*							
source_country	country	country	source	EX_SOURCE	string	FALSE	F.*							
collected_by	collected_by	collected_by	source	EX_SOURCE	string	FALSE	.*							
sub_species	sub_species	sub_species	source	EX_SOURCE	string	FALSE	.*							
host	host	host	source	EX_SOURCE	string	FALSE	.*							
isolation_source	isolation_source	isolation_source	source	EX_SOURCE	string	FALSE	.*							
