halapi hierarchichalalignmentformatapi

- Main Page
- Namespaces
- Classes
- Files

- Class List
- Class Index
- Class Hierarchy
- Class Members

hal::HDF5BottomSegmentIterator Member List
This is the complete list of members for hal::HDF5BottomSegmentIterator, including all inherited members.

_bottomSegment (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[protected]`
_endOffset (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[mutable, protected]`
_reversed (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[mutable, protected]`
_startOffset (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[mutable, protected]`
copy() (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[virtual]`
copy() const (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[virtual]`
counted_ptr< BottomSegmentIterator > (defined in hal::BottomSegmentIterator) | hal::BottomSegmentIterator | `[friend]`
counted_ptr< const BottomSegmentIterator > (defined in hal::BottomSegmentIterator) | hal::BottomSegmentIterator | `[friend]`
counted_ptr< const SegmentIterator > (defined in hal::SegmentIterator) | hal::SegmentIterator | `[friend]`
counted_ptr< SegmentIterator > (defined in hal::SegmentIterator) | hal::SegmentIterator | `[friend]`
getBottomSegment() (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[virtual]`
getBottomSegment() const (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[virtual]`
getEndOffset() const (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[virtual]`
getLength() const (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[virtual]`
getReversed() const (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[virtual]`
getStartOffset() const (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[virtual]`
getString(std::string &outString) const (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[virtual]`
HDF5BottomSegmentIterator(HDF5Genome *genome, hal_index_t index, hal_size_t startOffset=0, hal_size_t endOffset=0, hal_bool_t inverted=false) (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator |
HDF5TopSegmentIterator (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[friend]`
inRange() const (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[inline]`
toLeft() const (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[virtual]`
toNextParalogy() const (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[virtual]`
toParent(TopSegmentIteratorConstPtr ts) const (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[virtual]`
toParseDown(TopSegmentIteratorConstPtr ts) const (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[virtual]`
toReverse() const (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[virtual]`
toRight() const (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator | `[virtual]`
~BottomSegmentIterator()=0 (defined in hal::BottomSegmentIterator) | hal::BottomSegmentIterator | `[inline, protected, pure virtual]`
~HDF5BottomSegmentIterator() (defined in hal::HDF5BottomSegmentIterator) | hal::HDF5BottomSegmentIterator |
~SegmentIterator()=0 (defined in hal::SegmentIterator) | hal::SegmentIterator | `[inline, protected, pure virtual]`

All Classes Namespaces Functions Variables Friends