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## Files

file | hal.h [code]
file | halAlignment.h [code]
file | halAlignmentInstance.h [code]
file | halBottomSegment.h [code]
file | halBottomSegmentIterator.h [code]
file | halCLParser.h [code]
file | halCLParserInstance.h [code]
file | halColumnIterator.h [code]
file | halCommon.h [code]
file | halDefs.h [code]
file | halDNAIterator.h [code]
file | halGappedBottomSegmentIterator.h [code]
file | halGappedSegmentIterator.h [code]
file | halGappedTopSegmentIterator.h [code]
file | halGenome.h [code]
file | halMappedSegment.h [code]
file | halMetaData.h [code]
file | halPositionCache.h [code]
file | halRearrangement.h [code]
file | halSegment.h [code]
file | halSegmentedSequence.h [code]
file | halSegmentIterator.h [code]
file | halSequence.h [code]
file | halSequenceIterator.h [code]
file | halSlicedSegment.h [code]
file | halTopSegment.h [code]
file | halTopSegmentIterator.h [code]
file | halValidate.h [code]