{% set version = "1.38.0" %}
{% set name = "TransView" %}
{% set bioc = "3.14" %}

package:
  name: 'bioconductor-{{ name|lower }}'
  version: '{{ version }}'
source:
  url:
    - 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
    - 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
  md5: c0bace8480b1e373aee778cefc39cb40
build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/
# Suggests: RUnit, pasillaBamSubset, BiocManager
# SystemRequirements: GNU make
requirements:
  host:
    - 'bioconductor-biocgenerics >=0.40.0,<0.41.0'
    - 'bioconductor-genomicranges >=1.46.0,<1.47.0'
    - 'bioconductor-iranges >=2.28.0,<2.29.0'
    - 'bioconductor-rhtslib >=1.26.0,<1.27.0'
    - 'bioconductor-s4vectors >=0.32.0,<0.33.0'
    - 'bioconductor-zlibbioc >=1.40.0,<1.41.0'
    - r-base
    - r-gplots
    - libblas
    - liblapack
  run:
    - 'bioconductor-biocgenerics >=0.40.0,<0.41.0'
    - 'bioconductor-genomicranges >=1.46.0,<1.47.0'
    - 'bioconductor-iranges >=2.28.0,<2.29.0'
    - 'bioconductor-rhtslib >=1.26.0,<1.27.0'
    - 'bioconductor-s4vectors >=0.32.0,<0.33.0'
    - 'bioconductor-zlibbioc >=1.40.0,<1.41.0'
    - r-base
    - r-gplots
  build:
    - {{ compiler('c') }}
    - make
test:
  commands:
    - '$R -e "library(''{{ name }}'')"'
about:
  home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
  license: GPL-3
  summary: 'Read density map construction and accession. Visualization of ChIPSeq and RNASeq data sets'
  description: 'This package provides efficient tools to generate, access and display read densities of sequencing based data sets such as from RNA-Seq and ChIP-Seq.'
  license_file: '{{ environ["PREFIX"] }}/lib/R/share/licenses/GPL-3'
extra:
  identifiers:
    - biotools:transview
    - doi:10.1038/nmeth.3252
  parent_recipe:
    name: bioconductor-transview
    path: recipes/bioconductor-transview
    version: 1.24.0

