# Datasets for signatureSearch package

## Documentation for package ‘signatureSearchData’ version 1.8.4

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

cmap | CMap2 LFC Signature Database
cmap_expr | CMap Intensity Signature Database
cmap_rank | Cmap Rank Signature Database
combineNormRes | Combine Normalized Data from Different Chip Types
combineResults | Combine Batch-processed Normalization Results
dtlink_db_clue_sti | Drug-Target Annotation Resources
ES_NULL | Null Distribution of WTCS from 'gess_lincs' Method
getCmapCEL | Download CMap2 CEL Files
goAnno | GO Term to Gene SYMBOLs Mapping Annotation
goAnno_drug | GO Term ID to Drug Name Mapping Annotation
GO_DATA | GO Annotation Environment
GO_DATA_drug | GO to Drug Annotation Environment
inst_filter | Filter LINCS Level 3 by Condition
lincs | LINCS Z-score Signature Database
lincs_expr | LINCS Intensity Signature Database
meanExpr | Calculate Mean Value for Replicated Samples
normalizeCel | Normalize CEL Files
probe2gene | Transform Probe Set to Gene Level Data
runLimma | DEG Analysis with Limma
sampleList | Generate List of Treatment vs. Control Samples
signatureSearchData | signatureSearchData: Reference Data for Gene Expression Signature Searching
sig_filter | Filter LINCS Level 5 by Condition
taurefList | Lookup Table for Computing Tau Scores