# A collection of pre-processing functions

## Documentation for package ‘preprocessCore’ version 1.56.0

- DESCRIPTION file.

## Help Pages

colSummarizeAvg | Summarize the column of matrices
colSummarizeAvgLog | Summarize the column of matrices
colSummarizeBiweight | Summarize the column of matrices
colSummarizeBiweightLog | Summarize the column of matrices
colSummarizeLogAvg | Summarize the column of matrices
colSummarizeLogMedian | Summarize the column of matrices
colSummarizeMedian | Summarize the column of matrices
colSummarizeMedianLog | Summarize the column of matrices
colSummarizeMedianpolish | Summarize the column of matrices
colSummarizeMedianpolishLog | Summarize the column of matrices
convert.group.labels | Summarize columns when divided into groups of rows
normalize.AffyBatch.quantiles.robust | Robust Quantile Normalization
normalize.quantiles | Quantile Normalization
normalize.quantiles.determine.target | Quantile Normalization using a specified target distribution vector
normalize.quantiles.in.blocks | Quantile Normalization carried out separately within blocks of rows
normalize.quantiles.robust | Robust Quantile Normalization
normalize.quantiles.use.target | Quantile Normalization using a specified target distribution vector
rcModelMedianPolish | Fit row-column model to a matrix
rcModelPLM | Fit row-column model to a matrix
rcModelPLMd | Fit robust row-column models to a matrix
rcModelPLMr | Fit robust row-column models to a matrix
rcModelPLMrc | Fit robust row-column models to a matrix
rcModelPLMrr | Fit robust row-column models to a matrix
rcModelWPLM | Fit row-column model to a matrix
rcModelWPLMr | Fit robust row-column models to a matrix
rcModelWPLMrc | Fit robust row-column models to a matrix
rcModelWPLMrr | Fit robust row-column models to a matrix
rma.background.correct | RMA Background Correction
subColSummarizeAvg | Summarize columns when divided into groups of rows
subColSummarizeAvgLog | Summarize columns when divided into groups of rows
subColSummarizeBiweight | Summarize columns when divided into groups of rows
subColSummarizeBiweightLog | Summarize columns when divided into groups of rows
subColSummarizeLogAvg | Summarize columns when divided into groups of rows
subColSummarizeLogMedian | Summarize columns when divided into groups of rows
subColSummarizeMedian | Summarize columns when divided into groups of rows
subColSummarizeMedianLog | Summarize columns when divided into groups of rows
subColSummarizeMedianpolish | Summarize columns when divided into groups of rows
subColSummarizeMedianpolishLog | Summarize columns when divided into groups of rows
subrcModelMedianPolish | Fit row-column model to a matrix
subrcModelPLM | Fit row-column model to a matrix
subrcModelWPLM | Fit row-column model to a matrix