Package: seqbias
Version: 1.40.0
Date: 2019-10-12
Title: Estimation of per-position bias in high-throughput sequencing
        data
Description: This package implements a model of per-position sequencing
        bias in high-throughput sequencing data using a simple Bayesian
        network, the structure and parameters of which are trained on a
        set of aligned reads and a reference genome sequence.
Author: Daniel Jones <dcjones@cs.washington.edu>
Maintainer: Daniel Jones <dcjones@cs.washington.edu>
Depends: R (>= 3.0.2), GenomicRanges (>= 0.1.0), Biostrings (>=
        2.15.0), methods
LinkingTo: Rhtslib (>= 1.15.3)
SystemRequirements: GNU make
Suggests: Rsamtools, ggplot2
LazyLoad: yes
License: LGPL-3
biocViews: Sequencing
git_url: https://git.bioconductor.org/packages/seqbias
git_branch: RELEASE_3_13
git_last_commit: c9d8e78
git_last_commit_date: 2021-05-19
Date/Publication: 2021-05-19
NeedsCompilation: yes
Packaged: 2021-05-19 22:49:49 UTC; biocbuild
Built: R 4.1.0; x86_64-conda-linux-gnu; 2021-06-01 07:47:34 UTC; unix
