Package: SCArray
Type: Package
Title: Large-scale single-cell RNA-seq data manipulation with GDS files
Version: 1.10.0
Date: 2023-07-07
Depends: R (>= 3.5.0), gdsfmt (>= 1.36.0), methods, DelayedArray (>=
        0.27.2)
Imports: S4Vectors, utils, Matrix, BiocParallel, DelayedMatrixStats,
        SummarizedExperiment, SingleCellExperiment, BiocSingular
Suggests: BiocGenerics, scater, scuttle, uwot, RUnit, knitr, markdown,
        rmarkdown, rhdf5, HDF5Array
Authors@R: c(person("Xiuwen", "Zheng", role=c("aut", "cre"),
        email="xiuwen.zheng@abbvie.com",
        comment=c(ORCID="0000-0002-1390-0708")))
Description: Provides large-scale single-cell RNA-seq data manipulation using
        Genomic Data Structure (GDS) files. It combines dense and sparse
        matrices stored in GDS files and the Bioconductor infrastructure
        framework (SingleCellExperiment and DelayedArray) to provide
        out-of-memory data storage and large-scale manipulation using the R
        programming language.
License: GPL-3
VignetteBuilder: knitr
ByteCompile: TRUE
URL: https://github.com/AbbVie-ComputationalGenomics/SCArray
biocViews: Infrastructure, DataRepresentation, DataImport, SingleCell,
        RNASeq
git_url: https://git.bioconductor.org/packages/SCArray
git_branch: RELEASE_3_18
git_last_commit: 0761825
git_last_commit_date: 2023-10-24
Date/Publication: 2023-10-24
NeedsCompilation: yes
Packaged: 2023-10-24 22:53:30 UTC; biocbuild
Author: Xiuwen Zheng [aut, cre] (<https://orcid.org/0000-0002-1390-0708>)
Maintainer: Xiuwen Zheng <xiuwen.zheng@abbvie.com>
Built: R 4.3.2; x86_64-conda-linux-gnu; 2023-12-18 19:17:27 UTC; unix
