{% set version = "1.22.0" %}
{% set name = "qckitfastq" %}
{% set bioc = "3.20" %}

about:
  description: Assessment of FASTQ file format with multiple metrics including quality score, sequence content, overrepresented sequence and Kmers.
  home: https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html
  license: Artistic-2.0
  summary: FASTQ Quality Control

build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/
  run_exports: '{{ pin_subpackage("bioconductor-qckitfastq", max_pin="x.x") }}'

package:
  name: bioconductor-{{ name|lower }}
  version: '{{ version }}'

# Suggests: knitr, rmarkdown, kableExtra, testthat
# SystemRequirements: GNU make
requirements:
  build:
    - {{ compiler('c') }}
    - {{ compiler('cxx') }}
    - make
  host:
    - bioconductor-rseqan >=1.26.0,<1.27.0
    - bioconductor-seqtools >=1.40.0,<1.41.0
    - bioconductor-zlibbioc >=1.52.0,<1.53.0
    - r-base
    - r-data.table
    - r-dplyr
    - r-ggplot2
    - r-magrittr
    - r-rcpp
    - r-reshape2
    - r-rlang
    - libblas
    - liblapack
    - zlib
    - liblzma-devel
  run:
    - bioconductor-rseqan >=1.26.0,<1.27.0
    - bioconductor-seqtools >=1.40.0,<1.41.0
    - bioconductor-zlibbioc >=1.52.0,<1.53.0
    - r-base
    - r-data.table
    - r-dplyr
    - r-ggplot2
    - r-magrittr
    - r-rcpp
    - r-reshape2
    - r-rlang

source:
  md5: 77c0797c0e417c03aa5424bfb1d9ec15
  url:
    - https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz
    - https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/Archive/{{ name }}/{{ name }}_{{ version }}.tar.gz
    - https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-{{ name }}/bioconductor-{{ name }}_{{ version }}_src_all.tar.gz

test:
  commands:
    - $R -e "library('{{ name }}')"

