pcaMethods-package	pcaMethods
asExprSet	asExprSet
biplot,pcaRes-method	biplot-methods
biplot-methods	biplot-methods
biplot.pcaRes	biplot-methods
bpca	bpca
BPCA_dostep	BPCA_dostep
BPCA_initmodel	BPCA_initmodel
center	center-pcaRes-method
center,pcaRes-method	center-pcaRes-method
centered	centered-pcaRes-method
centered,pcaRes-method	centered-pcaRes-method
checkData	checkData
completeObs	completeObs-nniRes-method
completeObs,nniRes-method	completeObs-nniRes-method
completeObs,pcaRes-method	completeObs-nniRes-method
cvseg	cvseg
cvstat	cvstat-pcaRes-method
cvstat,pcaRes-method	cvstat-pcaRes-method
deletediagonals	deletediagonals
derrorHierarchic	derrorHierarchic
dim.pcaRes	dim.pcaRes
DModX	DModX-pcaRes-method
DModX,pcaRes-method	DModX-pcaRes-method
errorHierarchic	errorHierarchic
fitted,pcaRes-method	fitted-methods
fitted-methods	fitted-methods
fitted.pcaRes	fitted-methods
forkNlpcaNet	forkNlpcaNet
getHierarchicIdx	getHierarchicIdx
helix	helix
kEstimate	kEstimate
kEstimateFast	kEstimateFast
leverage	leverage-pcaRes-method
leverage,pcaRes-method	leverage-pcaRes-method
lineSearch	lineSearch
linr	linr
listPcaMethods	listPcaMethods
llsImpute	llsImpute
loadings	loadings-ANY-method
loadings,ANY-method	loadings-ANY-method
loadings,pcaRes-method	loadings-pcaRes-method
loadings.pcaRes	loadings.pcaRes
metaboliteData	metaboliteData
metaboliteDataComplete	metaboliteDataComplete
method	method-pcaRes-method
method,pcaRes-method	method-pcaRes-method
nipalsPca	nipalsPca
nlpca	nlpca
nlpcaNet	pcaNet
nlpcaNet-class	pcaNet
nmissing	nmissing-pcaRes-method
nmissing,nniRes-method	nmissing-pcaRes-method
nmissing,pcaRes-method	nmissing-pcaRes-method
nni	nni
nniRes	nniRes
nniRes-class	nniRes
nObs	nObs-pcaRes-method
nObs,pcaRes-method	nObs-pcaRes-method
nP	nP-pcaRes-method
nP,pcaRes-method	nP-pcaRes-method
nPcs	nPcs-pcaRes-method
nPcs,pcaRes-method	nPcs-pcaRes-method
nVar	nVar-pcaRes-method
nVar,pcaRes-method	nVar-pcaRes-method
optiAlgCgd	optiAlgCgd
orth	orth
pca	pca
pcaMethods	pcaMethods
pcaMethods-deprecated	pcaMethods-deprecated
pcaNet	pcaNet
pcaRes	pcaRes
pcaRes-class	pcaRes
plot,pcaRes-method	plot.pcaRes
plot.pcaRes	plot.pcaRes
plotPcs	plotPcs
ppca	ppca
predict,pcaRes-method	predict-methods
predict-methods	predict-methods
predict.pcaRes	predict-methods
prep	prep
print,nniRes-method	show-methods
print,pcaRes-method	show-methods
Q2	Q2
R2cum	R2cum-pcaRes-method
R2cum,pcaRes-method	R2cum-pcaRes-method
R2VX	R2VX-pcaRes-method
R2VX,pcaRes-method	R2VX-pcaRes-method
rediduals-methods	rediduals-methods
repmat	repmat
resid,pcaRes-method	rediduals-methods
residuals,pcaRes-method	rediduals-methods
residuals.pcaRes	rediduals-methods
RnipalsPca	RnipalsPca
robustPca	robustPca
robustSvd	robustSvd
scaled	scaled-pcaRes-method
scaled,pcaRes-method	scaled-pcaRes-method
scl	scl-pcaRes-method
scl,pcaRes-method	scl-pcaRes-method
scores	scores-pcaRes-method
scores,pcaRes-method	scores-pcaRes-method
scores.pcaRes	scores.pcaRes
sDev	sDev-pcaRes-method
sDev,pcaRes-method	sDev-pcaRes-method
show,nniRes-method	show-methods
show,pcaRes-method	show-methods
show-methods	show-methods
showNniRes	showNniRes
showPcaRes	show-methods
simpleEllipse	simpleEllipse
slplot	slplot-pcaRes-method
slplot,pcaRes-method	slplot-pcaRes-method
sortFeatures	sortFeatures
summary	summary
summary,pcaRes-method	summary
summary.pcaRes	summary
svdImpute	svdImpute
svdPca	svdPca
tempFixNas	tempFixNas
vector2matrices,matrix-method	vector2matrices-matrix-method
vector2matrices,nlpcaNet-method	vector2matrices-nlpcaNet-method
wasna	wasna-pcaRes-method
wasna,pcaRes-method	wasna-pcaRes-method
weightsAccount	weightsAccount
