# Predict open reading frames in nucleotide sequences

## Documentation for package ‘ORFhunteR’ version 1.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

annotateORFs | Annotate open reading frames
classifyORFsCandidates | Classify the pseudo and true ORF candidates derived from RNA molecules
codonStartStop | Identify all potential start and stop codons in a nucleotide sequence
findORFs | Identify all variants of open reading frames in a nucleotide sequence
findPTCs | Identify the premature termination codons in nucleotide sequences
getSeqORFs | Extract the sequences of identified open reading frames
loadTrExper | Load a set of transcripts
predictORF | Predict the true ORFs in mRNA molecules
translateORFs | Translate open reading frames to proteins
vectorizeORFs | Vectorize the ORF(-s) sequence(-s) to sequence features