Package: NuPoP
Type: Package
Title: An R package for nucleosome positioning prediction
Version: 2.2.0
Date: 2020-11-21
Author: Ji-Ping Wang <jzwang@northwestern.edu>; Liqun Xi <liqunxi02@gmail.com>; Oscar Zarate <zarate@u.northwestern.edu>
Maintainer: Ji-Ping Wang<jzwang@northwestern.edu>
Description: NuPoP is an R package for Nucleosome Positioning Prediction.This package is built upon a duration hidden Markov model proposed in Xi et al, 2010; Wang et al, 2008. The core of the package was written in Fotran. In addition to the R package, a stand-alone Fortran software tool is also available at http://nucleosome.stats.northwestern.edu.
License: GPL-2
Imports: graphics, utils
biocViews: Genetics,Visualization,Classification,NucleosomePositioning,
        HiddenMarkovModel
Depends: R (>= 4.0)
NeedsCompilation: yes
RoxygenNote: 6.1.1
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/NuPoP
git_branch: RELEASE_3_14
git_last_commit: ab10a61
git_last_commit_date: 2021-10-26
Date/Publication: 2021-10-26
Packaged: 2021-10-26 22:04:47 UTC; biocbuild
Built: R 4.1.2; x86_64-conda-linux-gnu; 2022-02-21 19:22:36 UTC; unix
