# This file created by conda-build 3.24.0
# meta.yaml template originally from:
# /opt/recipe, last modified Mon May 29 20:15:29 2023
# ------------------------------------------------

package:
  name: bioconductor-normr
  version: 1.24.0
source:
  md5: ea7e051b690756e00a9ec7ec742f4f9b
  url:
    - https://bioarchive.galaxyproject.org/normr_1.24.0.tar.gz
    - https://bioconductor.org/packages/3.16/bioc/src/contrib/Archive/normr/normr_1.24.0.tar.gz
    - https://bioconductor.org/packages/3.16/bioc/src/contrib/normr_1.24.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-normr/bioconductor-normr_1.24.0_src_all.tar.gz
build:
  number: '1'
  rpaths:
    - lib/
    - lib/R/lib/
  string: r42hf17093f_1
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - binutils_impl_linux-64 2.39 he00db2b_1
    - binutils_linux-64 2.39 h5fc0e48_13
    - gcc_impl_linux-64 12.2.0 hcc96c02_19
    - gcc_linux-64 12.2.0 h4798a0e_13
    - gxx_impl_linux-64 12.2.0 hcc96c02_19
    - gxx_linux-64 12.2.0 hb41e900_13
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - ld_impl_linux-64 2.39 hcc3a1bd_1
    - libgcc-devel_linux-64 12.2.0 h3b97bd3_19
    - libgcc-ng 12.2.0 h65d4601_19
    - libgomp 12.2.0 h65d4601_19
    - libsanitizer 12.2.0 h46fd767_19
    - libstdcxx-devel_linux-64 12.2.0 h3b97bd3_19
    - libstdcxx-ng 12.2.0 h46fd767_19
    - make 4.3 hd18ef5c_1
    - sysroot_linux-64 2.12 he073ed8_15
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - _r-mutex 1.0.1 anacondar_1
    - argcomplete 3.0.8 pyhd8ed1ab_0
    - binutils_impl_linux-64 2.40 hf600244_0
    - bioconductor-bamsignals 1.30.0 r42hf17093f_1
    - bioconductor-biobase 2.58.0 r42ha9d7317_1
    - bioconductor-biocgenerics 0.44.0 r42hdfd78af_0
    - bioconductor-biocio 1.8.0 r42hdfd78af_0
    - bioconductor-biocparallel 1.32.5 r42hf17093f_1
    - bioconductor-biostrings 2.66.0 r42ha9d7317_1
    - bioconductor-data-packages 20230420 hdfd78af_0
    - bioconductor-delayedarray 0.24.0 r42ha9d7317_1
    - bioconductor-genomeinfodb 1.34.9 r42hdfd78af_0
    - bioconductor-genomeinfodbdata 1.2.9 r42hdfd78af_0
    - bioconductor-genomicalignments 1.34.0 r42ha9d7317_1
    - bioconductor-genomicranges 1.50.0 r42ha9d7317_1
    - bioconductor-iranges 2.32.0 r42ha9d7317_1
    - bioconductor-matrixgenerics 1.10.0 r42hdfd78af_0
    - bioconductor-qvalue 2.30.0 r42hdfd78af_0
    - bioconductor-rhtslib 2.0.0 r42ha9d7317_1
    - bioconductor-rsamtools 2.14.0 r42hf17093f_1
    - bioconductor-rtracklayer 1.58.0 r42h58c1800_2
    - bioconductor-s4vectors 0.36.0 r42ha9d7317_1
    - bioconductor-summarizedexperiment 1.28.0 r42hdfd78af_0
    - bioconductor-xvector 0.38.0 r42ha9d7317_1
    - bioconductor-zlibbioc 1.44.0 r42ha9d7317_2
    - bwidget 1.9.14 ha770c72_1
    - bzip2 1.0.8 h7f98852_4
    - c-ares 1.19.1 hd590300_0
    - ca-certificates 2023.5.7 hbcca054_0
    - cairo 1.16.0 hbbf8b49_1016
    - curl 8.1.1 h409715c_0
    - expat 2.5.0 hcb278e6_1
    - font-ttf-dejavu-sans-mono 2.37 hab24e00_0
    - font-ttf-inconsolata 3.000 h77eed37_0
    - font-ttf-source-code-pro 2.038 h77eed37_0
    - font-ttf-ubuntu 0.83 hab24e00_0
    - fontconfig 2.14.2 h14ed4e7_0
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.12.1 hca18f0e_1
    - fribidi 1.0.10 h36c2ea0_0
    - gcc_impl_linux-64 12.2.0 hcc96c02_19
    - gettext 0.21.1 h27087fc_0
    - gfortran_impl_linux-64 12.2.0 h55be85b_19
    - graphite2 1.3.13 h58526e2_1001
    - gsl 2.7 he838d99_0
    - gxx_impl_linux-64 12.2.0 hcc96c02_19
    - harfbuzz 7.3.0 hdb3a94d_0
    - icu 72.1 hcb278e6_0
    - jq 1.6 h36c2ea0_1000
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - keyutils 1.6.1 h166bdaf_0
    - krb5 1.20.1 h81ceb04_0
    - ld_impl_linux-64 2.40 h41732ed_0
    - lerc 4.0.0 h27087fc_0
    - libblas 3.9.0 5_h92ddd45_netlib
    - libcblas 3.9.0 5_h92ddd45_netlib
    - libcurl 8.1.1 h409715c_0
    - libdeflate 1.18 h0b41bf4_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h516909a_1
    - libexpat 2.5.0 hcb278e6_1
    - libffi 3.4.2 h7f98852_5
    - libgcc-devel_linux-64 12.2.0 h3b97bd3_19
    - libgcc-ng 12.2.0 h65d4601_19
    - libgfortran-ng 12.2.0 h69a702a_19
    - libgfortran5 12.2.0 h337968e_19
    - libglib 2.76.3 hebfc3b9_0
    - libgomp 12.2.0 h65d4601_19
    - libiconv 1.17 h166bdaf_0
    - libjpeg-turbo 2.1.5.1 h0b41bf4_0
    - liblapack 3.9.0 5_h92ddd45_netlib
    - libnghttp2 1.52.0 h61bc06f_0
    - libnsl 2.0.0 h7f98852_0
    - libpng 1.6.39 h753d276_0
    - libsanitizer 12.2.0 h46fd767_19
    - libsqlite 3.42.0 h2797004_0
    - libssh2 1.10.0 hf14f497_3
    - libstdcxx-devel_linux-64 12.2.0 h3b97bd3_19
    - libstdcxx-ng 12.2.0 h46fd767_19
    - libtiff 4.5.0 ha587672_6
    - libuuid 2.38.1 h0b41bf4_0
    - libwebp-base 1.3.0 h0b41bf4_0
    - libxcb 1.15 h0b41bf4_0
    - libxml2 2.11.4 h0d562d8_0
    - libzlib 1.2.13 h166bdaf_4
    - make 4.3 hd18ef5c_1
    - ncurses 6.3 h27087fc_1
    - oniguruma 6.9.8 h166bdaf_0
    - openssl 3.1.0 hd590300_3
    - pango 1.50.14 heaa33ce_1
    - pcre2 10.40 hc3806b6_0
    - pip 23.1.2 pyhd8ed1ab_0
    - pixman 0.40.0 h36c2ea0_0
    - pthread-stubs 0.4 h36c2ea0_1001
    - python 3.11.3 h2755cc3_0_cpython
    - python_abi 3.11 3_cp311
    - pyyaml 6.0 py311hd4cff14_5
    - r-base 4.2.3 hfabd6f2_3
    - r-bh 1.81.0_1 r42hc72bb7e_0
    - r-bitops 1.0_7 r42h06615bd_1
    - r-cli 3.6.1 r42h38f115c_0
    - r-codetools 0.2_19 r42hc72bb7e_0
    - r-colorspace 2.1_0 r42h133d619_0
    - r-cpp11 0.4.3 r42hc72bb7e_0
    - r-crayon 1.5.2 r42hc72bb7e_1
    - r-ellipsis 0.3.2 r42h06615bd_1
    - r-fansi 1.0.4 r42h133d619_0
    - r-farver 2.1.1 r42h7525677_1
    - r-formatr 1.14 r42hc72bb7e_0
    - r-futile.logger 1.4.3 r42hc72bb7e_1004
    - r-futile.options 1.0.1 r42hc72bb7e_1003
    - r-ggplot2 3.4.2 r42hc72bb7e_0
    - r-glue 1.6.2 r42h06615bd_1
    - r-gtable 0.3.3 r42hc72bb7e_0
    - r-isoband 0.2.7 r42h38f115c_1
    - r-labeling 0.4.2 r42hc72bb7e_2
    - r-lambda.r 1.2.4 r42hc72bb7e_2
    - r-lattice 0.21_8 r42h133d619_0
    - r-lifecycle 1.0.3 r42hc72bb7e_1
    - r-magrittr 2.0.3 r42h06615bd_1
    - r-mass 7.3_60 r42h57805ef_0
    - r-matrix 1.5_4.1 r42h316c678_0
    - r-matrixstats 0.63.0 r42h06615bd_0
    - r-mgcv 1.8_42 r42he1ae0d6_0
    - r-munsell 0.5.0 r42hc72bb7e_1005
    - r-nlme 3.1_162 r42hac0b197_0
    - r-pillar 1.9.0 r42hc72bb7e_0
    - r-pkgconfig 2.0.3 r42hc72bb7e_2
    - r-plyr 1.8.8 r42h7525677_0
    - r-r6 2.5.1 r42hc72bb7e_1
    - r-rcolorbrewer 1.1_3 r42h785f33e_1
    - r-rcpp 1.0.10 r42h38f115c_0
    - r-rcurl 1.98_1.12 r42hf9611b0_1
    - r-reshape2 1.4.4 r42h7525677_2
    - r-restfulr 0.0.15 r42h56115f1_2
    - r-rjson 0.2.21 r42h7525677_2
    - r-rlang 1.1.1 r42ha503ecb_0
    - r-scales 1.2.1 r42hc72bb7e_1
    - r-snow 0.4_4 r42hc72bb7e_1
    - r-stringi 1.7.12 r42hc0c3e09_1
    - r-stringr 1.5.0 r42h785f33e_0
    - r-tibble 3.2.1 r42h133d619_1
    - r-utf8 1.2.3 r42h133d619_0
    - r-vctrs 0.6.2 r42ha503ecb_0
    - r-viridislite 0.4.1 r42hc72bb7e_1
    - r-withr 2.5.0 r42hc72bb7e_1
    - r-xml 3.99_0.14 r42hc38eee6_1
    - r-yaml 2.3.7 r42h133d619_0
    - readline 8.2 h8228510_1
    - sed 4.8 he412f7d_0
    - setuptools 67.7.2 pyhd8ed1ab_0
    - sysroot_linux-64 2.12 he073ed8_15
    - tk 8.6.12 h27826a3_0
    - tktable 2.10 hb7b940f_3
    - toml 0.10.2 pyhd8ed1ab_0
    - tomlkit 0.11.8 pyha770c72_0
    - tzdata 2023c h71feb2d_0
    - wheel 0.40.0 pyhd8ed1ab_0
    - xmltodict 0.13.0 pyhd8ed1ab_0
    - xorg-kbproto 1.0.7 h7f98852_1002
    - xorg-libice 1.0.10 h7f98852_0
    - xorg-libsm 1.2.3 hd9c2040_1000
    - xorg-libx11 1.8.4 h8ee46fc_1
    - xorg-libxau 1.0.11 hd590300_0
    - xorg-libxdmcp 1.1.3 h7f98852_0
    - xorg-libxext 1.3.4 h0b41bf4_2
    - xorg-libxrender 0.9.10 h7f98852_1003
    - xorg-libxt 1.2.1 h7f98852_2
    - xorg-renderproto 0.11.1 h7f98852_1002
    - xorg-xextproto 7.3.0 h0b41bf4_1003
    - xorg-xproto 7.0.31 h7f98852_1007
    - xz 5.2.6 h166bdaf_0
    - yaml 0.2.5 h7f98852_2
    - yq 3.2.2 pyhd8ed1ab_0
    - zlib 1.2.13 h166bdaf_4
    - zstd 1.5.2 h3eb15da_6
  run:
    - bioconductor-bamsignals >=1.30.0,<1.31.0
    - bioconductor-genomeinfodb >=1.34.0,<1.35.0
    - bioconductor-genomicranges >=1.50.0,<1.51.0
    - bioconductor-iranges >=2.32.0,<2.33.0
    - bioconductor-qvalue >=2.30.0,<2.31.0
    - bioconductor-rtracklayer >=1.58.0,<1.59.0
    - libblas >=3.9.0,<4.0a0
    - libgcc-ng >=12
    - liblapack >=3.9.0,<4.0a0
    - libstdcxx-ng >=12
    - r-base >=4.2,<4.3.0a0
    - r-rcpp >=0.11
test:
  commands:
    - $R -e "library('normr')"
about:
  description: Robust normalization and difference calling procedures for ChIP-seq
    and alike data. Read counts are modeled jointly as a binomial mixture model with
    a user-specified number of components. A fitted background estimate accounts for
    the effect of enrichment in certain regions and, therefore, represents an appropriate
    null hypothesis. This robust background is used to identify significantly enriched
    or depleted regions.
  home: https://bioconductor.org/packages/3.16/bioc/html/normr.html
  license: GPL-2
  license_file: /opt/conda/conda-bld/bioconductor-normr_1685411051696/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/lib/R/share/licenses/GPL-2
  summary: Normalization and difference calling in ChIP-seq data
extra:
  copy_test_source_files: true
  final: true
