# This file created by conda-build 3.21.4
# meta.yaml template originally from:
# /opt/recipe, last modified Tue Feb 22 12:19:26 2022
# ------------------------------------------------

package:
  name: bioconductor-netpathminer
  version: 1.30.0
source:
  md5: 90c6c33a8d7c6976340a16ae254f5af8
  url:
    - https://bioarchive.galaxyproject.org/NetPathMiner_1.30.0.tar.gz
    - https://bioconductor.org/packages/3.14/bioc/src/contrib/NetPathMiner_1.30.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-netpathminer/bioconductor-netpathminer_1.30.0_src_all.tar.gz
build:
  number: '1'
  rpaths:
    - lib/
    - lib/R/lib/
  string: r41hc5d2a11_1
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 1_gnu
    - autoconf 2.69 pl5321hd708f79_11
    - automake 1.16.5 pl5321ha770c72_0
    - binutils_impl_linux-64 2.36.1 h193b22a_2
    - binutils_linux-64 2.36 hf3e587d_5
    - gcc_impl_linux-64 10.3.0 hf2f2afa_12
    - gcc_linux-64 10.3.0 hc39de41_5
    - gxx_impl_linux-64 10.3.0 hf2f2afa_12
    - gxx_linux-64 10.3.0 h2593f52_5
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - ld_impl_linux-64 2.36.1 hea4e1c9_2
    - libgcc-devel_linux-64 10.3.0 he6cfe16_12
    - libgcc-ng 11.2.0 h1d223b6_12
    - libgomp 11.2.0 h1d223b6_12
    - libnsl 2.0.0 h7f98852_0
    - libsanitizer 10.3.0 h26c7422_12
    - libstdcxx-devel_linux-64 10.3.0 he6cfe16_12
    - libstdcxx-ng 11.2.0 he4da1e4_12
    - m4 1.4.18 h516909a_1001
    - make 4.3 hd18ef5c_1
    - perl 5.32.1 2_h7f98852_perl5
    - sysroot_linux-64 2.12 he073ed8_15
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 1_gnu
    - _r-mutex 1.0.1 anacondar_1
    - binutils_impl_linux-64 2.36.1 h193b22a_2
    - binutils_linux-64 2.36 hf3e587d_5
    - bwidget 1.9.14 ha770c72_1
    - bzip2 1.0.8 h7f98852_4
    - c-ares 1.18.1 h7f98852_0
    - ca-certificates 2021.10.8 ha878542_0
    - cairo 1.16.0 ha00ac49_1009
    - curl 7.81.0 h494985f_0
    - font-ttf-dejavu-sans-mono 2.37 hab24e00_0
    - font-ttf-inconsolata 3.000 h77eed37_0
    - font-ttf-source-code-pro 2.038 h77eed37_0
    - font-ttf-ubuntu 0.83 hab24e00_0
    - fontconfig 2.13.96 ha180cfb_0
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.10.4 h0708190_1
    - fribidi 1.0.10 h36c2ea0_0
    - gcc_impl_linux-64 9.4.0 h03d3576_12
    - gcc_linux-64 9.4.0 h391b98a_5
    - gettext 0.19.8.1 h73d1719_1008
    - gfortran_impl_linux-64 9.4.0 h0003116_12
    - gfortran_linux-64 9.4.0 hf0ab688_5
    - gmp 6.2.1 h58526e2_0
    - graphite2 1.3.13 h58526e2_1001
    - gsl 2.7 he838d99_0
    - gxx_impl_linux-64 9.4.0 h03d3576_12
    - gxx_linux-64 9.4.0 h0316aca_5
    - harfbuzz 3.4.0 hb4a5f5f_0
    - icu 69.1 h9c3ff4c_0
    - jbig 2.1 h7f98852_2003
    - jpeg 9e h7f98852_0
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - krb5 1.19.2 h48eae69_3
    - ld_impl_linux-64 2.36.1 hea4e1c9_2
    - lerc 3.0 h9c3ff4c_0
    - libblas 3.8.0 11_h86c2bf4_netlib
    - libcblas 3.8.0 11_h86c2bf4_netlib
    - libcurl 7.81.0 h494985f_0
    - libdeflate 1.10 h7f98852_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h516909a_1
    - libffi 3.4.2 h7f98852_5
    - libgcc-devel_linux-64 9.4.0 hd854feb_12
    - libgcc-ng 11.2.0 h1d223b6_12
    - libgfortran-ng 11.2.0 h69a702a_12
    - libgfortran5 11.2.0 h5c6108e_12
    - libglib 2.70.2 h174f98d_4
    - libgomp 11.2.0 h1d223b6_12
    - libiconv 1.16 h516909a_0
    - liblapack 3.8.0 11_h86c2bf4_netlib
    - libnghttp2 1.46.0 ha19adfc_0
    - libpng 1.6.37 h21135ba_2
    - libsanitizer 9.4.0 h79bfe98_12
    - libssh2 1.10.0 ha35d2d1_2
    - libstdcxx-devel_linux-64 9.4.0 hd854feb_12
    - libstdcxx-ng 11.2.0 he4da1e4_12
    - libtiff 4.3.0 h542a066_3
    - libuuid 2.32.1 h7f98852_1000
    - libwebp-base 1.2.2 h7f98852_1
    - libxcb 1.13 h7f98852_1004
    - libxml2 2.9.12 h885dcf4_1
    - libzlib 1.2.11 h36c2ea0_1013
    - lz4-c 1.9.3 h9c3ff4c_1
    - make 4.3 hd18ef5c_1
    - ncurses 6.2 h58526e2_4
    - openssl 3.0.0 h7f98852_2
    - pango 1.50.3 h9967ed3_0
    - pcre 8.45 h9c3ff4c_0
    - pcre2 10.37 h032f7d1_0
    - pixman 0.40.0 h36c2ea0_0
    - pthread-stubs 0.4 h36c2ea0_1001
    - r-base 4.1.2 h2553ce4_1
    - r-igraph 1.2.11 r41he0372cf_0
    - r-lattice 0.20_45 r41hcfec24a_0
    - r-magrittr 2.0.2 r41hcfec24a_0
    - r-matrix 1.4_0 r41he454529_0
    - r-pkgconfig 2.0.3 r41hc72bb7e_1
    - readline 8.1 h46c0cb4_0
    - sed 4.8 he412f7d_0
    - sysroot_linux-64 2.12 he073ed8_15
    - tk 8.6.12 h27826a3_0
    - tktable 2.10 hb7b940f_3
    - xorg-kbproto 1.0.7 h7f98852_1002
    - xorg-libice 1.0.10 h7f98852_0
    - xorg-libsm 1.2.3 hd9c2040_1000
    - xorg-libx11 1.7.2 h7f98852_0
    - xorg-libxau 1.0.9 h7f98852_0
    - xorg-libxdmcp 1.1.3 h7f98852_0
    - xorg-libxext 1.3.4 h7f98852_1
    - xorg-libxrender 0.9.10 h7f98852_1003
    - xorg-libxt 1.2.1 h7f98852_2
    - xorg-renderproto 0.11.1 h7f98852_1002
    - xorg-xextproto 7.3.0 h7f98852_1002
    - xorg-xproto 7.0.31 h7f98852_1007
    - xz 5.2.5 h516909a_1
    - zlib 1.2.11 h36c2ea0_1013
    - zstd 1.5.2 ha95c52a_0
  run:
    - libblas >=3.8.0,<4.0a0
    - libgcc-ng >=10.3.0
    - liblapack >=3.8.0,<4.0a0
    - libstdcxx-ng >=10.3.0
    - libxml2 >=2.9.12,<2.10.0a0
    - libxml2 >=2.9.12,<2.10.0a0
    - r-base >=4.1,<4.2.0a0
    - r-igraph >=1.0
test:
  commands:
    - $R -e "library('NetPathMiner')"
about:
  description: NetPathMiner is a general framework for network path mining using genome-scale
    networks. It constructs networks from KGML, SBML and BioPAX files, providing three
    network representations, metabolic, reaction and gene representations. NetPathMiner
    finds active paths and applies machine learning methods to summarize found paths
    for easy interpretation. It also provides static and interactive visualizations
    of networks and paths to aid manual investigation.
  home: https://bioconductor.org/packages/3.14/bioc/html/NetPathMiner.html
  license: GPL (>= 2)
  license_file: /opt/conda/conda-bld/bioconductor-netpathminer_1645546425279/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/R/share/licenses/GPL-3
  summary: NetPathMiner for Biological Network Construction, Path Mining and Visualization
extra:
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:netpathminer
