Package: mzR
Type: Package
Title: parser for netCDF, mzXML, mzData and mzML and mzIdentML files
        (mass spectrometry data)
Version: 2.16.0
Author: Bernd Fischer, Steffen Neumann, Laurent Gatto, Qiang Kou, Johannes Rainer
Maintainer: Steffen Neumann <sneumann@ipb-halle.de>,
 Laurent Gatto <lg390@cam.ac.uk>,
 Qiang Kou <qkou@umail.iu.edu>
Description: mzR provides a unified API to the common file formats and
        parsers available for mass spectrometry data. It comes with a
        wrapper for the ISB random access parser for mass spectrometry
        mzXML, mzData and mzML files. The package contains the
        original code written by the ISB, and a subset of the
        proteowizard library for mzML and mzIdentML. The netCDF
        reading code has previously been used in XCMS.
License: Artistic-2.0
LazyLoad: yes
Depends: Rcpp (>= 0.10.1), methods, utils
Imports: Biobase, BiocGenerics (>= 0.13.6), ProtGenerics (>= 1.9.1),
        ncdf4
Suggests: msdata (>= 0.15.1), RUnit, mzID, BiocStyle (>= 2.5.19),
        knitr, XML
VignetteBuilder: knitr
LinkingTo: Rcpp, zlibbioc, Rhdf5lib (>= 1.1.4)
RcppModules: Ramp, Pwiz, Ident
SystemRequirements: C++11, GNU make
URL: https://github.com/sneumann/mzR/
BugReports: https://github.com/sneumann/mzR/issues/
biocViews: Infrastructure, DataImport, Proteomics, Metabolomics,
        MassSpectrometry
RoxygenNote: 6.0.1
git_url: https://git.bioconductor.org/packages/mzR
git_branch: RELEASE_3_8
git_last_commit: 536d161
git_last_commit_date: 2018-10-30
Date/Publication: 2018-10-30
NeedsCompilation: yes
Packaged: 2018-10-30 23:35:10 UTC; biocbuild
Built: R 3.5.1; x86_64-conda_cos6-linux-gnu; 2018-12-18 20:55:06 UTC; unix
