Package: miRSM
Type: Package
Title: Inferring miRNA sponge modules in heterogeneous data
Version: 1.10.0
Authors@R: 
    person(given = "Junpeng", 
           family = "Zhang", 
           role=c("aut", "cre"), 
           email = "zhangjunpeng_411@yahoo.com")
Description: The package aims to identify miRNA sponge modules in heterogeneous data.
    It provides several functions to study miRNA sponge modules, including popular methods for inferring gene modules 
    (candidate miRNA sponge modules), and a function to identify miRNA sponge modules, as well as several functions to conduct 
    modular analysis of miRNA sponge modules.
Depends: R (>= 3.5.0)
License: GPL-3
URL: https://github.com/zhangjunpeng411/miRSM
Encoding: UTF-8
biocViews: GeneExpression, BiomedicalInformatics, Clustering,
        GeneSetEnrichment, Microarray, Software, GeneRegulation,
        GeneTarget
RoxygenNote: 7.1.1
Imports: WGCNA, flashClust, dynamicTreeCut, GFA, igraph, linkcomm, MCL,
        NMF, biclust, iBBiG, fabia, BicARE, isa2, s4vd, BiBitR, rqubic,
        Biobase, PMA, stats, dbscan, subspace, mclust, SOMbrero,
        ppclust, miRspongeR, Rcpp, utils, SummarizedExperiment,
        GSEABase, org.Hs.eg.db, MatrixCorrelation, energy
Suggests: BiocStyle, knitr, rmarkdown, testthat
VignetteBuilder: knitr
BugReports: https://github.com/zhangjunpeng411/miRSM/issues
git_url: https://git.bioconductor.org/packages/miRSM
git_branch: RELEASE_3_13
git_last_commit: 7d6b0e5
git_last_commit_date: 2021-05-19
Date/Publication: 2021-05-19
NeedsCompilation: yes
Packaged: 2021-05-19 22:10:27 UTC; biocbuild
Author: Junpeng Zhang [aut, cre]
Maintainer: Junpeng Zhang <zhangjunpeng_411@yahoo.com>
Built: R 4.1.0; x86_64-conda-linux-gnu; 2021-06-07 05:52:04 UTC; unix
