Package: methylPipe
Type: Package
Title: Base resolution DNA methylation data analysis
Version: 1.27.0
Date: 2020-10-19
Author: Kamal Kishore
Maintainer: Kamal Kishore <kamal.fartiyal84@gmail.com>
Description: Memory efficient analysis of base resolution DNA methylation data in both 
  the CpG and non-CpG sequence context. Integration of DNA methylation data derived from 
  any methodology providing base- or low-resolution data.
License: GPL(>=2)
LazyLoad: yes
Imports: marray, gplots, IRanges, BiocGenerics, Gviz,
        GenomicAlignments, Biostrings, parallel, data.table,
        GenomeInfoDb, S4Vectors
Depends: R (>= 3.2.0), methods, grDevices, graphics, stats, utils,
        GenomicRanges, SummarizedExperiment (>= 0.2.0), Rsamtools
Suggests: BSgenome.Hsapiens.UCSC.hg18,
        TxDb.Hsapiens.UCSC.hg18.knownGene, knitr, MethylSeekR
VignetteBuilder: knitr
biocViews: MethylSeq, DNAMethylation, Coverage, Sequencing
git_url: https://git.bioconductor.org/packages/methylPipe
git_branch: master
git_last_commit: bc4d8d8
git_last_commit_date: 2021-05-19
Date/Publication: 2021-05-19
NeedsCompilation: yes
Packaged: 2021-05-19 21:44:50 UTC; biocbuild
Built: R 4.1.1; x86_64-conda-linux-gnu; 2021-11-09 15:52:20 UTC; unix
