{% set version = "1.22.0" %}
{% set name = "metagenomeSeq" %}
{% set bioc = "3.7" %}

package:
  name: 'bioconductor-{{ name|lower }}'
  version: '{{ version }}'
source:
  url:
    - 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
    - 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
  sha256: 1e1e3933f47c7867b3654cd918870c86f7d411b96525bf3cb8ffb4cb7eb47ce1
build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/
requirements:
  host:
    - 'bioconductor-biobase >=2.40.0,<2.42.0'
    - 'bioconductor-limma >=3.36.5,<3.38.0'
    - r-base
    - r-foreach
    - r-glmnet
    - r-gplots
    - r-matrix
    - r-matrixstats
    - r-rcolorbrewer
  run:
    - 'bioconductor-biobase >=2.40.0,<2.42.0'
    - 'bioconductor-limma >=3.36.5,<3.38.0'
    - r-base
    - r-foreach
    - r-glmnet
    - r-gplots
    - r-matrix
    - r-matrixstats
    - r-rcolorbrewer
test:
  commands:
    - '$R -e "library(''{{ name }}'')"'
about:
  home: 'http://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
  license: Artistic-2.0
  summary: 'metagenomeSeq is designed to determine features (be it Operational Taxanomic Unit (OTU), species, etc.) that are differentially abundant between two or more groups of multiple samples. metagenomeSeq is designed to address the effects of both normalization and under-sampling of microbial communities on disease association detection and the testing of feature correlations.'
extra:
  identifiers:
    - biotools:metagenomeseq
    - doi:10.1038/nmeth.2658
