Type: Package
Package: maftools
Title: Summarize, Analyze and Visualize MAF Files
Version: 2.22.0
Date: 2021-04-30
Authors@R: 
    person(given = "Anand",
           family = "Mayakonda",
           role = c("aut", "cre"),
           email = "anand_mt@hotmail.com",
           comment = c(ORCID = "0000-0003-1162-687X"))
Maintainer: Anand Mayakonda <anand_mt@hotmail.com>
Description: Analyze and visualize Mutation Annotation Format (MAF) files
    from large scale sequencing studies. This package provides various
    functions to perform most commonly used analyses in cancer genomics
    and to create feature rich customizable visualzations with minimal
    effort.
License: MIT + file LICENSE
URL: https://github.com/PoisonAlien/maftools
BugReports: https://github.com/PoisonAlien/maftools/issues
Depends: R (>= 3.3)
Imports: data.table, grDevices, methods, RColorBrewer, Rhtslib,
        survival, DNAcopy, pheatmap
Suggests: berryFunctions, Biostrings, BSgenome,
        BSgenome.Hsapiens.UCSC.hg19, GenomicRanges, IRanges, knitr,
        mclust, MultiAssayExperiment, NMF, R.utils, RaggedExperiment,
        rmarkdown, S4Vectors, curl
LinkingTo: Rhtslib, zlibbioc
VignetteBuilder: knitr
biocViews: DataRepresentation, DNASeq, Visualization, DriverMutation,
        VariantAnnotation, FeatureExtraction, Classification,
        SomaticMutation, Sequencing, FunctionalGenomics, Survival
Encoding: UTF-8
NeedsCompilation: yes
Packaged: 2024-10-30 01:25:45 UTC; biocbuild
RoxygenNote: 7.3.1
SystemRequirements: GNU make
git_url: https://git.bioconductor.org/packages/maftools
git_branch: RELEASE_3_20
git_last_commit: faea1bb
git_last_commit_date: 2024-10-29
Repository: Bioconductor 3.20
Date/Publication: 2024-10-29
Author: Anand Mayakonda [aut, cre] (<https://orcid.org/0000-0003-1162-687X>)
Built: R 4.4.2; x86_64-conda-linux-gnu; 2024-12-20 20:50:32 UTC; unix
