IPPD-package	IPPD-package
analyzeLCMS	analyzeLCMS
calculatebasis.emg	internals
calculatebasis.gaussian	internals
calculatedenoisingbasis.emg	internals
calculatedenoisingbasis.gaussian	internals
dalpha	internals
determinemode	internals
dmu	internals
dsigma	internals
EMG	internals
erfc	internals
examples_boxes	internals
fit.combine	internals
fit.EMG	internals
fit.gauss	internals
fitModelParameters	fitModelParameters
fitModelParameters,numeric,numeric-method	fitModelParameters
fitModelParameters-methods	fitModelParameters
formulacoef2function	internals
gaussfun	internals
getpeakheights	internals
getPeaklist	getPeaklist
getPeaklist,numeric,numeric-method	getPeaklist
getPeaklist-methods	getPeaklist
grad	internals
grad.combine	internals
gridsearch	internals
intermediate.gaussian	internals
intermediateemg	internals
linesearch	internals
linesearchlad	internals
localnoise	internals
modelfit	modelfit-class
modelfit-class	modelfit-class
myo500	myo500
new.mzXML	read.mzXML
nnladlogbarrier	internals
nnlslogbarrier	internals
objective	internals
objective.combine	internals
P1	internals
P2	internals
P3	internals
P3prime	internals
peakdetect	internals
peaklist	peaklist-class
peaklist-class	peaklist-class
postprocess.emg	internals
postprocess.gaussian	internals
read.mzXML	read.mzXML
show,modelfit-method	modelfit-class
show,peaklist-method	peaklist-class
simplepeakdetect	internals
sweepline	sweepline
tableaveragine	internals
threshold	peaklist-class
threshold,peaklist-method	peaklist-class
toyspectrum	toyspectrum
toyspectrumsolution	toyspectrum
visualize	peaklist-class
visualize,modelfit,missing,missing-method	modelfit-class
visualize,peaklist,numeric,numeric-method	peaklist-class
