{% set version = "1.8.0" %}
{% set name = "InteractionSet" %}
{% set bioc = "3.7" %}

package:
  name: 'bioconductor-{{ name|lower }}'
  version: '{{ version }}'
source:
  url:
    - 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
    - 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
  sha256: 164dd6d8ed315881a6e3a202e3afc12dbed617ba988788529600b178b0cacf76
build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/
requirements:
  host:
    - 'bioconductor-biocgenerics >=0.26.0,<0.28.0'
    - 'bioconductor-genomeinfodb >=1.16.0,<1.18.0'
    - 'bioconductor-genomicranges >=1.32.7,<1.34.0'
    - 'bioconductor-iranges >=2.14.12,<2.16.0'
    - 'bioconductor-s4vectors >=0.18.3,<0.20.0'
    - 'bioconductor-summarizedexperiment >=1.10.1,<1.12.0'
    - r-base >=3.5
    - r-matrix
    - r-rcpp
  run:
    - 'bioconductor-biocgenerics >=0.26.0,<0.28.0'
    - 'bioconductor-genomeinfodb >=1.16.0,<1.18.0'
    - 'bioconductor-genomicranges >=1.32.7,<1.34.0'
    - 'bioconductor-iranges >=2.14.12,<2.16.0'
    - 'bioconductor-s4vectors >=0.18.3,<0.20.0'
    - 'bioconductor-summarizedexperiment >=1.10.1,<1.12.0'
    - r-base >=3.5
    - r-matrix
    - r-rcpp
  build:
    - {{ compiler('c') }}
    - {{ compiler('cxx') }}
    - make
test:
  commands:
    - '$R -e "library(''{{ name }}'')"'
about:
  home: 'http://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
  license: GPL-3
  summary: 'Provides the GInteractions, InteractionSet and ContactMatrix objects and associated methods for storing and manipulating genomic interaction data from Hi-C and ChIA-PET experiments.'
extra:
  identifiers:
    - biotools:interactionset
