Package: h5vc
Type: Package
Title: Managing alignment tallies using a hdf5 backend
Version: 2.28.0
Author: Paul Theodor Pyl
Maintainer: Paul Theodor Pyl <paul.theodor.pyl@gmail.com>
Description: This package contains functions to interact with tally data from NGS experiments that is stored in HDF5 files.
License: GPL (>= 3)
VignetteBuilder: knitr
Depends: grid, gridExtra, ggplot2
LinkingTo: Rhtslib (>= 1.15.3)
Imports: rhdf5, reshape, S4Vectors, IRanges, Biostrings, Rsamtools (>=
        1.99.1), methods, GenomicRanges, abind, BiocParallel,
        BatchJobs, h5vcData, GenomeInfoDb
Suggests: knitr, locfit, BSgenome.Hsapiens.UCSC.hg19, biomaRt,
        BSgenome.Hsapiens.NCBI.GRCh38, RUnit, BiocGenerics, rmarkdown
SystemRequirements: GNU make
git_url: https://git.bioconductor.org/packages/h5vc
git_branch: RELEASE_3_14
git_last_commit: c3e0cb5
git_last_commit_date: 2021-10-26
Date/Publication: 2021-10-26
NeedsCompilation: yes
Packaged: 2021-10-26 21:41:05 UTC; biocbuild
Built: R 4.1.2; x86_64-conda-linux-gnu; 2022-02-27 04:22:57 UTC; unix
