{% set version = "1.28.5" %}
{% set name = "ggbio" %}
{% set bioc = "3.7" %}

package:
  name: 'bioconductor-{{ name|lower }}'
  version: '{{ version }}'
source:
  url:
    - 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
    - 'https://depot.galaxyproject.org/software/bioconductor-{{ name }}/bioconductor-{{ name }}_{{ version }}_src_all.tar.gz'
  sha256: 4d901925bc46118cc1135883b18ee1bf97617c48a7d2411d218e33ef00d942a7
build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/
requirements:
  host:
    - 'bioconductor-annotationdbi >=1.42.1,<1.44.0'
    - 'bioconductor-annotationfilter >=1.4.0,<1.6.0'
    - 'bioconductor-biobase >=2.40.0,<2.42.0'
    - 'bioconductor-biocgenerics >=0.26.0,<0.28.0'
    - 'bioconductor-biostrings >=2.48.0,<2.50.0'
    - 'bioconductor-biovizbase >=1.28.2,<1.30.0'
    - 'bioconductor-bsgenome >=1.48.0,<1.50.0'
    - 'bioconductor-ensembldb >=2.4.1,<2.6.0'
    - 'bioconductor-genomeinfodb >=1.16.0,<1.18.0'
    - 'bioconductor-genomicalignments >=1.16.0,<1.18.0'
    - 'bioconductor-genomicfeatures >=1.32.2,<1.34.0'
    - 'bioconductor-genomicranges >=1.32.7,<1.34.0'
    - 'bioconductor-iranges >=2.14.12,<2.16.0'
    - 'bioconductor-organismdbi >=1.22.0,<1.24.0'
    - 'bioconductor-rsamtools >=1.32.3,<1.34.0'
    - 'bioconductor-rtracklayer >=1.40.6,<1.42.0'
    - 'bioconductor-s4vectors >=0.18.3,<0.20.0'
    - 'bioconductor-summarizedexperiment >=1.10.1,<1.12.0'
    - 'bioconductor-variantannotation >=1.26.1,<1.28.0'
    - r-base
    - r-ggally
    - 'r-ggplot2 >=1.0.0'
    - r-gridextra
    - r-gtable
    - r-hmisc
    - r-reshape2
    - r-rlang
    - r-scales
  run:
    - 'bioconductor-annotationdbi >=1.42.1,<1.44.0'
    - 'bioconductor-annotationfilter >=1.4.0,<1.6.0'
    - 'bioconductor-biobase >=2.40.0,<2.42.0'
    - 'bioconductor-biocgenerics >=0.26.0,<0.28.0'
    - 'bioconductor-biostrings >=2.48.0,<2.50.0'
    - 'bioconductor-biovizbase >=1.28.2,<1.30.0'
    - 'bioconductor-bsgenome >=1.48.0,<1.50.0'
    - 'bioconductor-ensembldb >=2.4.1,<2.6.0'
    - 'bioconductor-genomeinfodb >=1.16.0,<1.18.0'
    - 'bioconductor-genomicalignments >=1.16.0,<1.18.0'
    - 'bioconductor-genomicfeatures >=1.32.2,<1.34.0'
    - 'bioconductor-genomicranges >=1.32.7,<1.34.0'
    - 'bioconductor-iranges >=2.14.12,<2.16.0'
    - 'bioconductor-organismdbi >=1.22.0,<1.24.0'
    - 'bioconductor-rsamtools >=1.32.3,<1.34.0'
    - 'bioconductor-rtracklayer >=1.40.6,<1.42.0'
    - 'bioconductor-s4vectors >=0.18.3,<0.20.0'
    - 'bioconductor-summarizedexperiment >=1.10.1,<1.12.0'
    - 'bioconductor-variantannotation >=1.26.1,<1.28.0'
    - r-base
    - r-ggally
    - 'r-ggplot2 >=1.0.0'
    - r-gridextra
    - r-gtable
    - r-hmisc
    - r-reshape2
    - r-rlang
    - r-scales
test:
  commands:
    - '$R -e "library(''{{ name }}'')"'
about:
  home: 'http://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
  license: Artistic-2.0
  summary: 'The ggbio package extends and specializes the grammar of graphics for biological data. The graphics are designed to answer common scientific questions, in particular those often asked of high throughput genomics data. All core Bioconductor data structures are supported, where appropriate. The package supports detailed views of particular genomic regions, as well as genome-wide overviews. Supported overviews include ideograms and grand linear views. High-level plots include sequence fragment length, edge-linked interval to data view, mismatch pileup, and several splicing summaries.'
extra:
  identifiers:
    - biotools:ggbio
