# Get data from NCBI Gene Expression Omnibus (GEO)

## Documentation for package ‘GEOquery’ version 2.38.4

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

Accession | Generic functions for GEOquery
Accession-method | Class "GEOData"
Accession-method | Class "GEODataTable"
Columns | Generic functions for GEOquery
Columns-method | Class "GEOData"
Columns-method | Class "GEODataTable"
dataTable | Generic functions for GEOquery
dataTable-method | Class "GEOData"
dataTable-method | Class "GEODataTable"
GDS-class | Class "GDS"
GDS2eSet | Convert a GDS data structure to a BioConductor data structure
GDS2MA | Convert a GDS data structure to a BioConductor data structure
GEOData-class | Class "GEOData"
GEODataTable-class | Class "GEODataTable"
getGEO | Get a GEO object from NCBI or file
getGEOfile | Download a file from GEO soft file to the local machine
getGEOSuppFiles | Get Supplemental Files from GEO
getGSEDataTables | Get GSE data tables from GEO into R data structures.
GPL-class | Class "GPL"
GPLList | Generic functions for GEOquery
GPLList-method | Class "GSE"
GSE-class | Class "GSE"
GSM-class | Class "GSM"
GSMList | Generic functions for GEOquery
GSMList-method | Class "GSE"
gunzip | Gunzip a file
Meta | Generic functions for GEOquery
Meta-method | Class "GEOData"
Meta-method | Class "GEODataTable"
Meta-method | Class "GSE"
parseGDS | Parse GEO text
parseGEO | Parse GEO text
parseGPL | Parse GEO text
parseGSE | Parse GEO text
parseGSM | Parse GEO text
show-method | Class "GEOData"
show-method | Class "GEODataTable"
Table | Generic functions for GEOquery
Table-method | Class "GEOData"
Table-method | Class "GEODataTable"