# This file created by conda-build 3.18.9
# meta.yaml template originally from:
# /opt/recipe, last modified Fri Nov  1 07:24:05 2019
# ------------------------------------------------

package:
    name: bioconductor-geecc
    version: 1.20.0
source:
    md5: c53dd77ed87ff9458ef6a9b75558df5b
    url:
        - https://bioarchive.galaxyproject.org/geecc_1.20.0.tar.gz
        - https://bioconductor.org/packages/3.10/bioc/src/contrib/geecc_1.20.0.tar.gz
        - https://depot.galaxyproject.org/software/bioconductor-geecc/bioconductor-geecc_1.20.0_src_all.tar.gz
build:
    number: '0'
    rpaths:
        - lib/
        - lib/R/lib/
    string: r36he1b5a44_0
requirements:
    build:
        - _libgcc_mutex 0.1 main
        - binutils_impl_linux-64 2.31.1 h7fc9f1b_2
        - binutils_linux-64 2.31.1 h6176602_12
        - gcc_impl_linux-64 7.3.0 habb00fd_2
        - gcc_linux-64 7.3.0 h553295d_12
        - gxx_impl_linux-64 7.3.0 hdf63c60_2
        - gxx_linux-64 7.3.0 h553295d_12
        - libgcc-ng 9.1.0 hdf63c60_0
        - libstdcxx-ng 9.1.0 hdf63c60_0
        - make 4.2.1 h14c3975_2004
    host:
        - _libgcc_mutex 0.1 main
        - _r-mutex 1.0.1 anacondar_1
        - binutils_impl_linux-64 2.31.1 h7fc9f1b_2
        - binutils_linux-64 2.31.1 h6176602_12
        - bwidget 1.9.13 0
        - bzip2 1.0.8 h516909a_1
        - ca-certificates 2019.9.11 hecc5488_0
        - cairo 1.16.0 hfb77d84_1002
        - curl 7.65.3 hf8cf82a_0
        - fontconfig 2.13.1 h86ecdb6_1001
        - freetype 2.10.0 he983fc9_1
        - fribidi 1.0.5 h516909a_1002
        - gcc_impl_linux-64 7.3.0 habb00fd_2
        - gcc_linux-64 7.3.0 h553295d_12
        - gettext 0.19.8.1 hc5be6a0_1002
        - gfortran_impl_linux-64 7.3.0 hdf63c60_2
        - gfortran_linux-64 7.3.0 h553295d_12
        - glib 2.58.3 h6f030ca_1002
        - graphite2 1.3.13 hf484d3e_1000
        - gsl 2.5 h294904e_1
        - gxx_impl_linux-64 7.3.0 hdf63c60_2
        - gxx_linux-64 7.3.0 h553295d_12
        - harfbuzz 2.4.0 h9f30f68_3
        - icu 64.2 he1b5a44_1
        - jpeg 9c h14c3975_1001
        - krb5 1.16.3 h05b26f9_1001
        - libblas 3.8.0 14_openblas
        - libcblas 3.8.0 14_openblas
        - libcurl 7.65.3 hda55be3_0
        - libedit 3.1.20170329 hf8c457e_1001
        - libffi 3.2.1 he1b5a44_1006
        - libgcc-ng 9.1.0 hdf63c60_0
        - libgfortran-ng 7.3.0 hdf63c60_2
        - libiconv 1.15 h516909a_1005
        - liblapack 3.8.0 14_openblas
        - libopenblas 0.3.7 h6e990d7_2
        - libpng 1.6.37 hed695b0_0
        - libssh2 1.8.2 h22169c7_2
        - libstdcxx-ng 9.1.0 hdf63c60_0
        - libtiff 4.0.10 hfc65ed5_1004
        - libuuid 2.32.1 h14c3975_1000
        - libxcb 1.13 h14c3975_1002
        - libxml2 2.9.10 hee79883_0
        - lz4-c 1.8.3 he1b5a44_1001
        - make 4.2.1 h14c3975_2004
        - ncurses 6.1 hf484d3e_1002
        - openssl 1.1.1c h516909a_0
        - pango 1.42.4 ha030887_1
        - pcre 8.43 he1b5a44_0
        - pixman 0.38.0 h516909a_1003
        - pthread-stubs 0.4 h14c3975_1001
        - r-base 3.6.1 hba50c9b_5
        - r-bitops 1.0_6 r36hcdcec82_1003
        - r-catools 1.17.1.2 r36h0357c0b_1
        - r-gdata 2.18.0 r36h6115d3f_1002
        - r-gplots 3.0.1.1 r36h6115d3f_1
        - r-gtools 3.8.1 r36hcdcec82_1003
        - r-hypergea 1.3.6 r36h0357c0b_1002
        - r-kernsmooth 2.23_15 r36h9bbef5b_1004
        - r-mass 7.3_51.4 r36hcdcec82_1
        - r-rcpp 1.0.2 r36h0357c0b_0
        - readline 8.0 hf8c457e_0
        - sed 4.7 h1bed415_1000
        - tk 8.6.9 hed695b0_1003
        - tktable 2.10 h555a92e_3
        - xorg-kbproto 1.0.7 h14c3975_1002
        - xorg-libice 1.0.10 h516909a_0
        - xorg-libsm 1.2.3 h84519dc_1000
        - xorg-libx11 1.6.9 h516909a_0
        - xorg-libxau 1.0.9 h14c3975_0
        - xorg-libxdmcp 1.1.3 h516909a_0
        - xorg-libxext 1.3.4 h516909a_0
        - xorg-libxrender 0.9.10 h516909a_1002
        - xorg-renderproto 0.11.1 h14c3975_1002
        - xorg-xextproto 7.3.0 h14c3975_1002
        - xorg-xproto 7.0.31 h14c3975_1007
        - xz 5.2.4 h14c3975_1001
        - zlib 1.2.11 h516909a_1006
        - zstd 1.4.3 h3b9ef0a_0
    run:
        - libgcc-ng >=7.3.0
        - libstdcxx-ng >=7.3.0
        - r-base >=3.6,<3.7.0a0
        - r-gplots
        - r-hypergea >=1.3.0
        - r-mass
        - r-rcpp >=0.11.3
test:
    commands:
        - $R -e "library('geecc')"
about:
    description: Use log-linear models to perform hypergeometric and chi-squared tests
        for gene set enrichments for two (based on contingency tables) or three categories
        (contingency cubes). Categories can be differentially expressed genes, GO
        terms, sequence length, GC content, chromosomal position, phylostrata, divergence-strata,
        ....
    home: https://bioconductor.org/packages/3.10/bioc/html/geecc.html
    license: GPL (>= 2)
    license_file: /opt/conda/conda-bld/bioconductor-geecc_1572605732814/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/lib/R/share/licenses/GPL-3
    summary: Gene Set Enrichment Analysis Extended to Contingency Cubes
extra:
    copy_test_source_files: true
    final: true
