flowCore-package	flowCore-package
!,filter-method	filter-class
$,filterSummary-method	filterSummary-class
$,flowSet-method	flowSet-class
$,workFlow-method	workFlow-class
$.flowFrame	flowFrame-class
%&%	filter-and-methods
%&%,ANY-method	filter-and-methods
%&%,filter,filter-method	filter-and-methods
%&%-methods	filter-and-methods
%in%	filter-in-methods
%in%,ANY,filterReference-method	filter-in-methods
%in%,ANY,filterResult-method	filter-in-methods
%in%,ANY,manyFilterResult-method	filter-in-methods
%in%,ANY,multipleFilterResult-method	filter-in-methods
%in%,flowFrame,boundaryFilter-method	filter-in-methods
%in%,flowFrame,complementFilter-method	filter-in-methods
%in%,flowFrame,ellipsoidGate-method	filter-in-methods
%in%,flowFrame,expressionFilter-method	filter-in-methods
%in%,flowFrame,filterResult-method	filter-in-methods
%in%,flowFrame,intersectFilter-method	filter-in-methods
%in%,flowFrame,kmeansFilter-method	filter-in-methods
%in%,flowFrame,norm2Filter-method	filter-in-methods
%in%,flowFrame,polygonGate-method	filter-in-methods
%in%,flowFrame,polytopeGate-method	filter-in-methods
%in%,flowFrame,quadGate-method	filter-in-methods
%in%,flowFrame,rectangleGate-method	filter-in-methods
%in%,flowFrame,sampleFilter-method	filter-in-methods
%in%,flowFrame,subsetFilter-method	filter-in-methods
%in%,flowFrame,timeFilter-method	filter-in-methods
%in%,flowFrame,transformFilter-method	filter-in-methods
%in%,flowFrame,unionFilter-method	filter-in-methods
%in%-methods	filter-in-methods
%on%	filter-on-methods
%on%,ANY,flowSet-method	filter-on-methods
%on%,filter,parameterTransform-method	filter-on-methods
%on%,filter,transform-method	filter-on-methods
%on%,filter,transformList-method	filter-on-methods
%on%,parameterTransform,flowFrame-method	filter-on-methods
%on%,transform,flowFrame-method	filter-on-methods
%on%,transformList,flowFrame-method	filter-on-methods
%on%,transformList,flowSet-method	filter-on-methods
%on%-methods	filter-on-methods
%subset%	filter-and-methods
%subset%,ANY-method	filter-and-methods
%subset%,filter,filter-method	filter-and-methods
%subset%,filterSet,filter-method	filterSet-class
%subset%,list,filter-method	filter-and-methods
&,filter,filter-method	filter-and-methods
&,filter,list-method	filter-and-methods
&,list,filter-method	filter-and-methods
*,rectangleGate,rectangleGate-method	rectangleGate
<,flowFrame,ANY-method	flowFrame-class
<=,flowFrame,ANY-method	flowFrame-class
==,filterResult,flowFrame-method	filterResult-class
==,flowFrame,filterResult-method	flowFrame-class
==,flowFrame,flowFrame-method	flowFrame-class
>,flowFrame,ANY-method	flowFrame-class
>=,flowFrame,ANY-method	flowFrame-class
action	view-class
action,view-method	view-class
actionItem-class	actionItem-class
actions	workFlow-class
actions,workFlow-method	workFlow-class
add	workFlow-class
add,workFlow,character-method	subsetting-class
add,workFlow,compensation-method	workFlow-class
add,workFlow,concreteFilter-method	workFlow-class
add,workFlow,filterList-method	workFlow-class
add,workFlow,logical-method	subsetting-class
add,workFlow,normalization-method	normalization-class
add,workFlow,numeric-method	subsetting-class
add,workFlow,subsetting-method	subsetting-class
add,workFlow,transformList-method	workFlow-class
alias	view-class
alias,actionItem-method	actionItem-class
alias,environment-method	workFlow-class
alias,view-method	view-class
alias,workFlow-method	workFlow-class
arcsinhTransform	arcsinhTransform
as.data.frame.manyFilterResult	manyFilterResult-class
asinht	asinht-class
asinht-class	asinht-class
asinhtGml2	asinhtGml2-class
asinhtGml2-class	asinhtGml2-class
assign	fcReference-class
assign,ANY,ANY,missing,workFlow,missing,missing-method	workFlow-class
assign,character,ANY,workFlow,missing,missing,missing-method	workFlow-class
assign,fcReference,ANY,workFlow,missing,missing,missing-method	workFlow-class
assign,missing,ANY,missing,workFlow,missing,missing-method	workFlow-class
assign,missing,ANY,workFlow,missing,missing,missing-method	workFlow-class
biexponentialTransform	biexponentialTransform
booleanGate,filter-class	filter-class
boundaryFilter	boundaryFilter-class
boundaryFilter-class	boundaryFilter-class
c,transformList-method	transformList-class
call,filter-method	filter-methods
cbind2,flowFrame,matrix-method	flowFrame-class
cbind2,flowFrame,numeric-method	flowFrame-class
char2ExpressionFilter	expressionFilter-class
character,filter-method	filter-methods
characterOrTransformation-class	characterOrTransformation-class
checkOffset	checkOffset
cleanup	read.FCS
coerce	coerce
coerce,call,filter-method	coerce
coerce,character,filter-method	coerce
coerce,complementFilter,call-method	coerce
coerce,complementFilter,logical-method	coerce
coerce,ellipsoidGate,polygonGate-method	coerce
coerce,environment,flowSet-method	coerce
coerce,factor,filterResult-method	coerce
coerce,filter,call-method	coerce
coerce,filter,logical-method	coerce
coerce,filterReference,call-method	coerce
coerce,filterReference,concreteFilter-method	coerce
coerce,filterResult,logical-method	coerce
coerce,filterResultList,list-method	coerce
coerce,filterSet,list-method	coerce
coerce,filterSummary,data.frame-method	filterSummary-class
coerce,flowFrame,filterSet-method	coerce
coerce,flowFrame,flowSet-method	coerce
coerce,flowSet,flowFrame-method	coerce
coerce,flowSet,list-method	coerce
coerce,formula,filter-method	coerce
coerce,gateView,filterResult-method	coerce
coerce,intersectFiler,call-method	coerce
coerce,intersectFilter,call-method	filter-and-methods
coerce,intersectFilter,logical-method	coerce
coerce,list,filterResultList-method	coerce
coerce,list,filterSet-method	coerce
coerce,list,flowSet-method	coerce
coerce,list,transformList-method	coerce
coerce,logical,filterResult-method	coerce
coerce,logicalFilterResult,logical-method	coerce
coerce,matrix,filterResult-method	coerce
coerce,name,filter-method	coerce
coerce,nullParameter,character-method	coerce
coerce,numeric,filterResult-method	coerce
coerce,parameters,character-method	coerce
coerce,randomFilterResult,logical-method	coerce
coerce,ratio,character-method	coerce
coerce,rectangleGate,polygonGate-method	coerce
coerce,subsetFilter,call-method	coerce
coerce,subsetFilter,logical-method	coerce
coerce,transform,character-method	coerce
coerce,unionFilter,call-method	coerce
coerce,unionFilter,logical-method	coerce
coerce,unitytransform,character-method	coerce
colnames,flowFrame-method	flowFrame-class
colnames,flowSet-method	flowSet-class
colnames,transformList-method	transformList-class
colnames<-	flowFrame-class
colnames<-,flowFrame-method	flowFrame-class
colnames<-,flowSet-method	flowSet-class
compensate	compensation-class
compensate,flowFrame,compensation-method	flowFrame-class
compensate,flowFrame,data.frame-method	flowFrame-class
compensate,flowFrame,matrix-method	flowFrame-class
compensate,flowSet,ANY-method	flowSet-class
compensate,flowSet,data.frame-method	flowSet-class
compensate,flowSet,list-method	flowSet-class
compensateActionItem	compensateActionItem-class
compensateActionItem-class	compensateActionItem-class
compensatedParameter	compensatedParameter-class
compensatedParameter-class	compensatedParameter-class
compensateView	compensateView-class
compensateView-class	compensateView-class
compensation	compensation-class
compensation-class	compensation-class
complementFilter-class	setOperationFilter-class
concreteFilter-class	concreteFilter-class
Data	view-class
Data,view-method	view-class
decisionTreeGate,filter-class	filter-class
decompensate	decompensate
decompensate,flowFrame,data.frame-method	decompensate
decompensate,flowFrame,matrix-method	decompensate
description	flowFrame-class
description,flowFrame-method	flowFrame-class
description<-,flowFrame,ANY-method	flowFrame-class
description<-,flowFrame,list-method	flowFrame-class
dg1polynomial	dg1polynomial-class
dg1polynomial-class	dg1polynomial-class
dim	flowFrame-class
dim,flowFrame-method	flowFrame-class
each_col	each_col-methods
each_col,flowFrame-method	each_col-methods
each_col-methods	each_col-methods
each_row	each_col-methods
each_row,flowFrame-method	each_col-methods
each_row-methods	each_col-methods
EHtrans	EHtrans-class
EHtrans-class	EHtrans-class
ellipsoidGate	ellipsoidGate
ellipsoidGate,filter-class	filter-class
ellipsoidGate-class	ellipsoidGate
estimateLogicle	logicleTransform
estimateMedianLogicle	estimateMedianLogicle
eval,asinht,missing-method	asinht-class
eval,asinhtGml2,missing-method	asinhtGml2-class
eval,compensatedParameter,missing-method	compensatedParameter-class
eval,dg1polynomial,missing-method	dg1polynomial-class
eval,EHtrans,missing-method	EHtrans-class
eval,exponential,missing-method	exponential-class
eval,filterReference,missing-method	filterReference-class
eval,hyperlog,missing-method	hyperlog-class
eval,hyperlogtGml2,missing-method	hyperlogtGml2-class
eval,invsplitscale,missing-method	invsplitscale-class
eval,lintGml2,missing-method	lintGml2-class
eval,logarithm,missing-method	logarithm-class
eval,logicletGml2,missing-method	logicletGml2-class
eval,logtGml2,missing-method	logtGml2-class
eval,quadratic,missing-method	quadratic-class
eval,ratio,missing-method	ratio-class
eval,ratiotGml2,missing-method	ratiotGml2-class
eval,sinht,missing-method	sinht-class
eval,splitscale,missing-method	splitscale-class
eval,squareroot,missing-method	squareroot-class
eval,transformReference,missing-method	transformReference-class
eval,unitytransform,missing-method	unitytransform-class
exponential	exponential-class
exponential-class	exponential-class
expressionFilter	expressionFilter-class
expressionFilter-class	expressionFilter-class
exprs	flowFrame-class
exprs,flowFrame-method	flowFrame-class
exprs<-	flowFrame-class
exprs<-,flowFrame,ANY-method	flowFrame-class
exprs<-,flowFrame,matrix-method	flowFrame-class
fcActionReference	fcReference-class
fcActionReference-class	fcReference-class
fcAliasReference	fcReference-class
fcAliasReference-class	fcReference-class
fcCompensateReference	fcReference-class
fcCompensateReference-class	fcReference-class
fcDataReference	fcReference-class
fcDataReference-class	fcReference-class
fcFilterReference	fcReference-class
fcFilterReference-class	fcReference-class
fcFilterResultReference	fcReference-class
fcFilterResultReference-class	fcReference-class
fcNormalizationReference	fcReference-class
fcNormalizationReference-class	fcReference-class
fcNullReference	fcReference-class
fcNullReference-class	fcReference-class
fcReference	fcReference-class
fcReference-class	fcReference-class
FCSTransTransform	FCSTransTransform
fcStructureReference-class	fcReference-class
fcSubsettingReference	fcReference-class
fcSubsettingReference-class	fcReference-class
fcTransformReference	fcReference-class
fcTransformReference-class	fcReference-class
fcTreeReference	fcReference-class
fcTreeReference-class	fcReference-class
fcViewReference	fcReference-class
fcViewReference-class	fcReference-class
featureNames	flowFrame-class
featureNames,flowFrame-method	flowFrame-class
filter	filter-methods
filter,filter-method	filter-class
filter,flowFrame,filter-method	filter-methods
filter,flowFrame,filterSet-method	filter-methods
filter,flowFrame,norm2Filter	filter-methods
filter,flowFrame,polygonGate	filter-methods
filter,flowFrame,rectangleGate	filter-methods
filter,flowFrame-method	filter-methods
filter,flowSet,filter-method	filter-methods
filter,flowSet,filterList-method	filter-methods
filter,flowSet,filterSet-method	filter-methods
filter,flowSet,list-method	filter-methods
filter-class	filter-class
filter-on-methods	filter-on-methods
filterDetails	filterDetails-methods
filterDetails,filterResult,ANY-method	filterDetails-methods
filterDetails,filterResult,missing-method	filterDetails-methods
filterDetails-methods	filterDetails-methods
filterDetails<-	filterDetails-methods
filterDetails<-,filterResult,character,ANY-method	filterDetails-methods
filterDetails<-,filterResult,character,filter-method	filterDetails-methods
filterDetails<-,filterResult,character,setOperationFilter-method	filterDetails-methods
filtergate,filter-class	filter-class
filterList	filterList-class
filterList-class	filterList-class
filterReference	filterReference-class
filterReference,environment,character-method	filterReference-class
filterReference,filterSet,character-method	filterSet-class
filterReference-class	filterReference-class
filterResult	filterResult-class
filterResult-class	filterResult-class
filterResultList	filterResultList-class
filterResultList-class	filterResultList-class
filters	filters-class
filters-class	filters-class
filterSet	filterSet-class
filterSet-class	filterSet-class
filtersList	filters-class
filtersList-class	filters-class
filterSummary	filterSummary-class
filterSummary-class	filterSummary-class
filterSummaryList	filterSummaryList-class
filterSummaryList-class	filterSummaryList-class
flowCore	flowCore-package
flowFrame	flowFrame-class
flowFrame-class	flowFrame-class
flowSet	flowSet-class
flowSet-class	flowSet-class
formula,filter-method	filter-methods
fr_append_cols	fr_append_cols
fsApply	fsApply
fsApply,flowSet,ANY	fsApply
fsApply,flowSet-method	flowSet-class
gate	gateActionItem-class
gate,gateActionItem-method	gateActionItem-class
gateActionItem	gateActionItem-class
gateActionItem-class	gateActionItem-class
gateView	gateView-class
gateView-class	gateView-class
get,character,missing,workFlow-method	workFlow-class
get,character,workFlow,missing-method	workFlow-class
get,fcNullReference,missing,missing-method	fcReference-class
get,fcReference,missing,missing-method	fcReference-class
getChannelMarker	getChannelMarker
getIndexSort	getIndexSort-methods
getIndexSort,flowFrame-method	getIndexSort-methods
GvHD	GvHD
head,flowFrame-method	flowFrame-class
hyperlog	hyperlog-class
hyperlog-class	hyperlog-class
hyperlogtGml2	hyperlogtGml2-class
hyperlogtGml2-class	hyperlogtGml2-class
identifier	identifier-methods
identifier,actionItem-method	actionItem-class
identifier,compensation-method	compensation-class
identifier,fcReference-method	fcReference-class
identifier,filter-method	identifier-methods
identifier,filterList-method	filterList-class
identifier,filterReference-method	identifier-methods
identifier,filterResult-method	identifier-methods
identifier,filterSet,character-method	filterSet-class
identifier,filterSet-method	filterSet-class
identifier,flowFrame-method	identifier-methods
identifier,flowSet-method	flowSet-class
identifier,normalization-method	normalization-class
identifier,NULL-method	view-class
identifier,subsetting-method	subsetting-class
identifier,transform-method	identifier-methods
identifier,transformList-method	transformList-class
identifier,view-method	view-class
identifier-methods	identifier-methods
identifier<-	identifier-methods
identifier<-,compensation,character-method	compensation-class
identifier<-,filter,character-method	filter-methods
identifier<-,filterList,character-method	filterList-class
identifier<-,flowFrame,ANY-method	identifier-methods
identifier<-,flowFrame-method	identifier-methods
identifier<-,flowSet,ANY-method	flowSet-class
identifier<-,normalization,character-method	normalization-class
identifier<-,subsetting,character-method	subsetting-class
identifier<-,transformList,character-method	transformList-class
initialize,dg1polynomial-method	dg1polynomial-class
initialize,flowFrame-method	flowFrame-class
initialize,parameterFilter-method	parameterFilter-class
initialize,ratio-method	ratio-class
initialize,ratiotGml2-method	ratiotGml2-class
initialize,singleParameterTransform-method	singleParameterTransform-class
intersectFilter-class	setOperationFilter-class
intersectFilter-method	filter-and-methods
inverseLogicleTransform	inverseLogicleTransform
invsplitscale	invsplitscale-class
invsplitscale-class	invsplitscale-class
isFCSfile	read.FCS
isNull	fcReference-class
isNull,fcReference-method	fcReference-class
journal	workFlow-class
journal,environment-method	workFlow-class
journal,workFlow-method	workFlow-class
keyword	keyword-methods
keyword,flowFrame,character-method	keyword-methods
keyword,flowFrame,function-method	keyword-methods
keyword,flowFrame,list-method	keyword-methods
keyword,flowFrame,missing-method	keyword-methods
keyword,flowSet,ANY-method	keyword-methods
keyword,flowSet,list-method	keyword-methods
keyword-methods	keyword-methods
keyword<-	keyword-methods
keyword<-,flowFrame,ANY-method	keyword-methods
keyword<-,flowFrame,character-method	keyword-methods
keyword<-,flowFrame,list-method	keyword-methods
keyword<-,flowSet,list-method	keyword-methods
kmeansFilter	kmeansFilter
kmeansFilter-class	kmeansFilter
length,filter-method	filter-methods
length,filterReference-method	filterReference-class
length,filterSummary-method	filterSummary-class
length,flowSet-method	flowSet-class
length,kmeansFilter-method	kmeansFilter
length,logicalFilterResult-method	logicalFilterResult-class
length,manyFilterResult-method	manyFilterResult-class
length,multipleFilterResult-method	multipleFilterResult-class
linearTransform	linearTransform
lintGml2	lintGml2-class
lintGml2-class	lintGml2-class
lnTransform	lnTransform
logarithm	logarithm-class
logarithm-class	logarithm-class
logicalFilterResult	logicalFilterResult-class
logicalFilterResult-class	logicalFilterResult-class
logicletGml2	logicletGml2-class
logicletGml2-class	logicletGml2-class
logicleTransform	logicleTransform
logtGml2	logtGml2-class
logtGml2-class	logtGml2-class
logTransform	logTransform
ls	workFlow-class
ls,workFlow,missing,missing,missing,character-method	workFlow-class
ls,workFlow,missing,missing,missing,missing-method	workFlow-class
manyFilterResult	manyFilterResult-class
manyFilterResult-class	manyFilterResult-class
markernames	markernames
markernames,flowFrame-method	markernames
markernames,flowSet-method	markernames
markernames<-	markernames
markernames<-,flowFrame-method	markernames
markernames<-,flowSet-method	markernames
mget,character,workFlow-method	workFlow-class
multipleFilterResult	multipleFilterResult-class
multipleFilterResult-class	multipleFilterResult-class
name,filter-method	filter-methods
names	flowFrame-class
names,actionItem-method	actionItem-class
names,filterResultList-method	filterResultList-class
names,filterSet-method	filterSet-class
names,filterSummary-method	filterSummary-class
names,flowFrame-method	flowFrame-class
names,logicalFilterResult-method	logicalFilterResult-class
names,manyFilterResult-method	manyFilterResult-class
names,multipleFilterResult-method	multipleFilterResult-class
names,view-method	view-class
names,workFlow-method	workFlow-class
names<-,multipleFilterResult,ANY-method	multipleFilterResult-class
names<-,multipleFilterResult-method	multipleFilterResult-class
ncol,flowFrame-method	flowFrame-class
nodes,workFlow-method	workFlow-class
norm2Filter	norm2Filter-class
norm2Filter,filter-class	filter-class
norm2Filter-class	norm2Filter-class
normalization	normalization-class
normalization-class	normalization-class
normalize	normalization-class
normalize,flowSet,normalization-method	normalization-class
normalizeActionItem	normalizeActionItem-class
normalizeActionItem-class	normalizeActionItem-class
normalizeView	normalizeView-class
normalizeView-class	normalizeView-class
nrow,flowFrame-method	flowFrame-class
parameterFilter-class	parameterFilter-class
parameters	parameters-methods
parameters,compensation-method	compensation-class
parameters,filter-method	parameters-methods
parameters,filterReference-method	parameters-methods
parameters,filterResult-method	parameters-methods
parameters,filterResultList-method	filterResultList-class
parameters,flowFrame,missing-method	parameters-methods
parameters,flowFrame-method	parameters-methods
parameters,manyFilterResult-method	manyFilterResult-class
parameters,normalization-method	normalization-class
parameters,nullParameter-method	parameters-methods
parameters,parameterFilter-method	parameters-methods
parameters,parameterTransform-method	parameters-methods
parameters,ratio-method	parameters-methods
parameters,ratiotGml2-method	ratiotGml2-class
parameters,setOperationFilter-method	parameters-methods
parameters,singleParameterTransform-method	singleParameterTransform-class
parameters,transform-method	parameters-methods
parameters,transformReference-method	transformReference-class
parameters-class	parameters-class
parameters<-	parameters-methods
parameters<-,dg1polynomial,character-method	dg1polynomial-class
parameters<-,dg1polynomial,parameters-method	dg1polynomial-class
parameters<-,dg1polynomial,transform-method	parameters-methods
parameters<-,flowFrame,AnnotatedDataFrame-method	parameters-methods
parameters<-,parameterFilter,character-method	parameters-methods
parameters<-,parameterFilter,list-method	parameters-methods
parameters<-,parameterFilter,transform-method	parameters-methods
parameters<-,singleParameterTransform,character-method	parameters-methods
parameters<-,singleParameterTransform,transform-method	parameters-methods
parameterTransform-class	parameterTransform-class
parent	view-class
parent,actionItem-method	actionItem-class
parent,NULL-method	view-class
parent,view-method	view-class
pData,flowSet-method	flowSet-class
pData<-,flowSet,data.frame-method	flowSet-class
phenoData,flowSet-method	flowSet-class
phenoData<-,flowSet,ANY-method	flowSet-class
phenoData<-,flowSet,phenoData-method	flowSet-class
plot,flowFrame,ANY-method	flowFrame-class
plot,flowFrame-method	flowFrame-class
plot,flowSet,ANY-method	flowSet-class
plot,flowSet-method	flowSet-class
plot,workFlow,missing-method	workFlow-class
polygonGate	polygonGate
polygonGate,filter-class	filter-class
polygonGate-class	polygonGate
polytopeGate	polytopeGate
polytopeGate-class	polytopeGate
print,compensateActionItem-method	compensateActionItem-class
print,filterSummary-method	filterSummary-class
print,gateActionItem-method	gateActionItem-class
print,normalizeActionItem-method	normalizeActionItem-class
print,subsettingActionItem-method	subsettingActionItem-class
print,transformActionItem-method	transformActionItem-class
print,view-method	view-class
quadGate	quadGate
quadGate-class	quadGate
quadratic	quadratic-class
quadratic-class	quadratic-class
quadraticTransform	quadraticTransform
randomFilterResult-class	randomFilterResult-class
range	flowFrame-class
range,flowFrame-method	flowFrame-class
ratio	ratio-class
ratio-class	ratio-class
ratiotGml2	ratiotGml2-class
ratiotGml2-class	ratiotGml2-class
rbind2,flowFrame,flowSet-method	flowSet-class
rbind2,flowSet,flowFrame-method	flowSet-class
rbind2,flowSet,flowSet,missing-method	flowSet-class
rbind2,flowSet,flowSet-method	flowSet-class
rbind2,flowSet,missing	flowSet-class
rbind2,flowSet,missing-method	flowSet-class
read.FCS	read.FCS
read.FCSheader	read.FCSheader
read.flowSet	read.flowSet
rectangleGate	rectangleGate
rectangleGate,filter-class	filter-class
rectangleGate-class	rectangleGate
Rm	fcReference-class
Rm,actionItem,workFlow,character-method	actionItem-class
Rm,character,workFlow,character-method	workFlow-class
Rm,compensateActionItem,workFlow,character-method	compensateActionItem-class
Rm,compensateView,workFlow,character-method	compensateView-class
Rm,fcNullReference,missing,character-method	fcReference-class
Rm,fcReference,missing,character-method	fcReference-class
Rm,fcReference,workFlow,character-method	fcReference-class
Rm,gateActionItem,workFlow,character-method	gateActionItem-class
Rm,gateView,workFlow,character-method	gateView-class
Rm,normalizeActionItem,workFlow,character-method	normalizeActionItem-class
Rm,normalizeView,workFlow,character-method	normalizeView-class
Rm,subsettingActionItem,workFlow,character-method	subsettingActionItem-class
Rm,subsettingView,workFlow,character-method	subsettingView-class
Rm,transformActionItem,workFlow,character-method	transformActionItem-class
Rm,transformView,workFlow,character-method	transformView-class
Rm,view,workFlow,character-method	view-class
sampleFilter	sampleFilter-class
sampleFilter-class	sampleFilter-class
sampleNames,flowSet-method	flowSet-class
sampleNames<-,flowSet,ANY-method	flowSet-class
scaleTransform	scaleTransform
setOperationFilter-class	setOperationFilter-class
show,boundaryFilter-method	boundaryFilter-class
show,compensateActionItem-method	compensateActionItem-class
show,compensation-method	compensation-class
show,complementFilter-method	setOperationFilter-class
show,ellipsoidGate-method	ellipsoidGate
show,expressionFilter-method	expressionFilter-class
show,fcNullReference-method	fcReference-class
show,fcReference-method	fcReference-class
show,filter-method	filter-methods
show,filterList-method	filterList-class
show,filterReference-method	filterReference-class
show,filterResult-method	filterResult-class
show,filterResultList-method	filterResultList-class
show,filters-method	filters-class
show,filterSet-method	filterSet-class
show,filtersList-method	filters-class
show,filterSummary-method	filterSummary-class
show,flowFrame-method	flowFrame-class
show,flowSet-method	flowSet-class
show,gateActionItem-method	gateActionItem-class
show,intersectFilter-method	setOperationFilter-class
show,kmeansFilter-method	kmeansFilter
show,manyFilterResult-method	manyFilterResult-class
show,multipleFilterResult-method	multipleFilterResult-class
show,norm2Filter-method	norm2Filter-class
show,normalizeActionItem-method	normalizeActionItem-class
show,polygonGate-method	polygonGate
show,polytopeGate-method	polytopeGate
show,quadGate-method	quadGate
show,rectangleGate-method	rectangleGate
show,sampleFilter-method	sampleFilter-class
show,subsetFilter-method	setOperationFilter-class
show,subsetting-method	subsetting-class
show,subsettingActionItem-method	subsettingActionItem-class
show,timeFilter-method	timeFilter-class
show,transform-method	transform-class
show,transformActionItem-method	transformActionItem-class
show,transformFilter-method	transformFilter-class
show,transformMap-method	transformMap-class
show,unionFilter-method	setOperationFilter-class
show,unitytransform-method	unitytransform-class
show,view-method	view-class
show,workFlow-method	workFlow-class
singleParameterTransform-class	singleParameterTransform-class
sinht	sinht-class
sinht-class	sinht-class
sort,filterSet-method	filterSet-class
spillover	spillover-flowSet
spillover,flowFrame-method	flowFrame-class
spillover,flowSet-method	spillover-flowSet
spillover_ng	spillover_ng-flowSet
spillover_ng,flowSet-method	spillover_ng-flowSet
split	split-methods
split,flowFrame,ANY-method	split-methods
split,flowFrame,character-method	split-methods
split,flowFrame,factor-method	split-methods
split,flowFrame,filter-method	split-methods
split,flowFrame,filterSet-method	split-methods
split,flowFrame,logicalFilterResult-method	split-methods
split,flowFrame,manyFilterResult-method	split-methods
split,flowFrame,multipleFilterResult-method	split-methods
split,flowFrame,numeric-method	split-methods
split,flowSet,ANY-method	split-methods
split,flowSet,character-method	split-methods
split,flowSet,factor-method	split-methods
split,flowSet,filter-method	split-methods
split,flowSet,filterResult-method	split-methods
split,flowSet,filterResultList-method	filterResultList-class
split,flowSet,list-method	split-methods
split,flowSet,numeric-method	split-methods
split-methods	split-methods
splitscale	splitscale-class
splitscale-class	splitscale-class
splitScaleTransform	splitScaleTransform
squareroot	squareroot-class
squareroot-class	squareroot-class
Subset	Subset-methods
Subset,flowFrame,filter-method	Subset-methods
Subset,flowFrame,logical-method	Subset-methods
Subset,flowFrame-method	Subset-methods
Subset,flowSet,ANY	Subset-methods
Subset,flowSet,ANY-method	Subset-methods
Subset,flowSet,filterResultList-method	Subset-methods
Subset,flowSet,list-method	Subset-methods
subsetFilter-class	setOperationFilter-class
subsetFilter-method	filter-and-methods
subsetting	subsetting-class
subsetting-class	subsetting-class
subsettingActionItem	subsettingActionItem-class
subsettingActionItem-class	subsettingActionItem-class
subsettingView	subsettingView-class
subsettingView-class	subsettingView-class
summarizeFilter	summarizeFilter-methods
summarizeFilter,filterResult,filter-method	summarizeFilter-methods
summarizeFilter,filterResult,filterReference-method	summarizeFilter-methods
summarizeFilter,filterResult,parameterFilter-method	summarizeFilter-methods
summarizeFilter,filterResult,subsetFilter-method	summarizeFilter-methods
summarizeFilter,logicalFilterResult,norm2Filter-method	summarizeFilter-methods
summarizeFilter,logicalFilterResult,parameterFilter-method	summarizeFilter-methods
summarizeFilter,multipleFilterResult,parameterFilter-method	summarizeFilter-methods
summarizeFilter-methods	summarizeFilter-methods
summary,filter-method	filter-methods
summary,filterReference-method	filterReference-class
summary,filterResult-method	filterSummary-class
summary,filterResultList-method	filterResultList-class
summary,flowFrame-method	flowFrame-class
summary,flowSet-method	flowSet-class
summary,gateActionItem-method	gateActionItem-class
summary,gateView-method	gateView-class
summary,logicalFilterResult-method	logicalFilterResult-class
summary,manyFilterResult-method	manyFilterResult-class
summary,multipleFilterResult-method	multipleFilterResult-class
summary,rectangleGate-method	rectangleGate
summary,subsetFilter-method	setOperationFilter-class
summary,transform-method	transform-class
summary,workFlow-method	workFlow-class
tail,flowFrame-method	flowFrame-class
timeFilter	timeFilter-class
timeFilter-class	timeFilter-class
toTable	filterSummary-class
toTable,filterSummary-method	filterSummary-class
toTable,filterSummaryList-method	filterSummaryList-class
transform	transform-class
transform,flowFrame-method	flowFrame-class
transform,flowSet-method	flowSet-class
transform,missing-method	transform-class
transform-class	transform-class
transformActionItem	transformActionItem-class
transformActionItem-class	transformActionItem-class
transformation-class	transformation-class
transformFilter	transformFilter-class
transformFilter-class	transformFilter-class
transformList	transformList-class
transformList-class	transformList-class
transformMap	transformMap-class
transformMap-class	transformMap-class
transformReference	transformReference-class
transformReference-class	transformReference-class
transformView	transformView-class
transformView-class	transformView-class
tree	workFlow-class
tree,environment-method	workFlow-class
tree,workFlow-method	workFlow-class
truncateTransform	truncateTransform
undo	workFlow-class
unionFilter-class	setOperationFilter-class
unitytransform	unitytransform-class
unitytransform-class	unitytransform-class
updateTransformKeywords	updateTransformKeywords
validFilters	validFilters
varLabels,flowSet-method	flowSet-class
varLabels<-,flowSet,ANY-method	flowSet-class
varLabels<-,flowSet-method	flowSet-class
varMetadata,flowSet-method	flowSet-class
varMetadata<-,flowSet,ANY-method	flowSet-class
view	view-class
view-class	view-class
views	workFlow-class
views,workFlow-method	workFlow-class
workFlow	workFlow-class
workFlow-class	workFlow-class
write.FCS	write.FCS
write.flowSet	write.flowSet
xyplot,formula,gateView-method	gateView-class
xyplot,formula,view-method	view-class
xyplot,view,missing-method	view-class
[,filterResultList,ANY-method	filterResultList-class
[,filterSet,character-method	filterSet-class
[,flowFrame,ANY-method	flowFrame-class
[,flowFrame,filter-method	flowFrame-class
[,flowFrame,filterResult-method	flowFrame-class
[,flowSet,ANY-method	flowSet-class
[,flowSet-method	flowSet-class
[,multipleFilterResult,ANY-method	multipleFilterResult-class
[,rectangleGate,ANY-method	rectangleGate
[,rectangleGate,character-method	rectangleGate
[,workFlow,ANY-method	workFlow-class
[[,filterResult,ANY-method	filterResult-class
[[,filterResultList,ANY-method	filterResultList-class
[[,filterSet,character-method	filterSet-class
[[,filterSummary,character-method	filterSummary-class
[[,filterSummary,numeric-method	filterSummary-class
[[,flowSet,ANY-method	flowSet-class
[[,flowSet-method	flowSet-class
[[,logicalFilterResult,ANY-method	logicalFilterResult-class
[[,manyFilterResult,ANY-method	manyFilterResult-class
[[,manyFilterResult-method	manyFilterResult-class
[[,multipleFilterResult,ANY-method	multipleFilterResult-class
[[,multipleFilterResult-method	multipleFilterResult-class
[[,workFlow,ANY-method	workFlow-class
[[<-,filterSet,ANY,ANY,filterReference-method	filterSet-class
[[<-,filterSet,character,ANY,filter-method	filterSet-class
[[<-,filterSet,character,ANY,formula-method	filterSet-class
[[<-,filterSet,missing,ANY,filter	filterSet-class
[[<-,filterSet,missing,ANY,filter-method	filterSet-class
[[<-,filterSet,NULL,ANY,filter-method	filterSet-class
[[<-,filterSet,NULL,ANY,formula-method	filterSet-class
[[<-,flowFrame-method	flowSet-class
[[<-,flowSet,ANY,ANY,flowFrame-method	flowSet-class
[[<-,flowSet-method	flowSet-class
|,filter,filter-method	filter-class
|,filter,list-method	filter-class
|,list,filter-method	filter-class
