# This file created by conda-build 3.21.8
# meta.yaml template originally from:
# /opt/recipe, last modified Thu Sep 15 06:46:46 2022
# ------------------------------------------------

package:
  name: bioconductor-fithic
  version: 1.20.0
source:
  md5: 7fc6c2d59d1bafe03c127e5386f2b67f
  url:
    - https://bioarchive.galaxyproject.org/FitHiC_1.20.0.tar.gz
    - https://bioconductor.org/packages/3.14/bioc/src/contrib/FitHiC_1.20.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-fithic/bioconductor-fithic_1.20.0_src_all.tar.gz
build:
  number: '2'
  rpaths:
    - lib/
    - lib/R/lib/
  string: r41hc247a5b_2
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - binutils_impl_linux-64 2.36.1 h193b22a_2
    - binutils_linux-64 2.36 hf3e587d_10
    - gcc_impl_linux-64 10.4.0 h7ee1905_16
    - gcc_linux-64 10.4.0 h9215b83_10
    - gxx_impl_linux-64 10.4.0 h7ee1905_16
    - gxx_linux-64 10.4.0 h6e491c6_10
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - ld_impl_linux-64 2.36.1 hea4e1c9_2
    - libgcc-devel_linux-64 10.4.0 h74af60c_16
    - libgcc-ng 12.1.0 h8d9b700_16
    - libgomp 12.1.0 h8d9b700_16
    - libsanitizer 10.4.0 hde28e3b_16
    - libstdcxx-devel_linux-64 10.4.0 h74af60c_16
    - libstdcxx-ng 12.1.0 ha89aaad_16
    - make 4.3 hd18ef5c_1
    - sysroot_linux-64 2.12 he073ed8_15
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - _r-mutex 1.0.1 anacondar_1
    - binutils_impl_linux-64 2.36.1 h193b22a_2
    - bwidget 1.9.14 ha770c72_1
    - bzip2 1.0.8 h7f98852_4
    - c-ares 1.18.1 h7f98852_0
    - ca-certificates 2022.9.14 ha878542_0
    - cairo 1.16.0 ha61ee94_1013
    - curl 7.83.1 h2283fc2_0
    - expat 2.4.8 h27087fc_0
    - font-ttf-dejavu-sans-mono 2.37 hab24e00_0
    - font-ttf-inconsolata 3.000 h77eed37_0
    - font-ttf-source-code-pro 2.038 h77eed37_0
    - font-ttf-ubuntu 0.83 hab24e00_0
    - fontconfig 2.14.0 hc2a2eb6_1
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.12.1 hca18f0e_0
    - fribidi 1.0.10 h36c2ea0_0
    - gcc_impl_linux-64 12.1.0 hea43390_16
    - gettext 0.19.8.1 h73d1719_1008
    - gfortran_impl_linux-64 12.1.0 h1db8e46_16
    - graphite2 1.3.13 h58526e2_1001
    - gsl 2.7 he838d99_0
    - gxx_impl_linux-64 12.1.0 hea43390_16
    - harfbuzz 5.1.0 hf9f4e7c_0
    - icu 70.1 h27087fc_0
    - jpeg 9e h166bdaf_2
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - keyutils 1.6.1 h166bdaf_0
    - krb5 1.19.3 h08a2579_0
    - ld_impl_linux-64 2.36.1 hea4e1c9_2
    - lerc 4.0.0 h27087fc_0
    - libblas 3.9.0 5_h92ddd45_netlib
    - libcblas 3.9.0 5_h92ddd45_netlib
    - libcurl 7.83.1 h2283fc2_0
    - libdeflate 1.14 h166bdaf_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h516909a_1
    - libffi 3.4.2 h7f98852_5
    - libgcc-devel_linux-64 12.1.0 h1ec3361_16
    - libgcc-ng 12.1.0 h8d9b700_16
    - libgfortran-ng 12.1.0 h69a702a_16
    - libgfortran5 12.1.0 hdcd56e2_16
    - libglib 2.72.1 h2d90d5f_0
    - libgomp 12.1.0 h8d9b700_16
    - libiconv 1.16 h516909a_0
    - liblapack 3.9.0 5_h92ddd45_netlib
    - libnghttp2 1.47.0 hff17c54_1
    - libpng 1.6.37 h753d276_4
    - libsanitizer 12.1.0 ha89aaad_16
    - libssh2 1.10.0 hf14f497_3
    - libstdcxx-devel_linux-64 12.1.0 h1ec3361_16
    - libstdcxx-ng 12.1.0 ha89aaad_16
    - libtiff 4.4.0 h55922b4_4
    - libuuid 2.32.1 h7f98852_1000
    - libwebp-base 1.2.4 h166bdaf_0
    - libxcb 1.13 h7f98852_1004
    - libxml2 2.9.14 h22db469_4
    - libzlib 1.2.12 h166bdaf_3
    - make 4.3 hd18ef5c_1
    - ncurses 6.3 h27087fc_1
    - openssl 3.0.5 h166bdaf_2
    - pango 1.50.9 hc4f8a73_0
    - pcre 8.45 h9c3ff4c_0
    - pcre2 10.37 hc3806b6_1
    - pixman 0.40.0 h36c2ea0_0
    - pthread-stubs 0.4 h36c2ea0_1001
    - r-base 4.1.3 ha8c3e7c_2
    - r-data.table 1.14.2 r41hcfec24a_0
    - r-fdrtool 1.2.17 r41hcfec24a_0
    - r-rcpp 1.0.9 r41h7525677_1
    - readline 8.1.2 h0f457ee_0
    - sed 4.8 he412f7d_0
    - sysroot_linux-64 2.12 he073ed8_15
    - tk 8.6.12 h27826a3_0
    - tktable 2.10 hb7b940f_3
    - xorg-kbproto 1.0.7 h7f98852_1002
    - xorg-libice 1.0.10 h7f98852_0
    - xorg-libsm 1.2.3 hd9c2040_1000
    - xorg-libx11 1.7.2 h7f98852_0
    - xorg-libxau 1.0.9 h7f98852_0
    - xorg-libxdmcp 1.1.3 h7f98852_0
    - xorg-libxext 1.3.4 h7f98852_1
    - xorg-libxrender 0.9.10 h7f98852_1003
    - xorg-libxt 1.2.1 h7f98852_2
    - xorg-renderproto 0.11.1 h7f98852_1002
    - xorg-xextproto 7.3.0 h7f98852_1002
    - xorg-xproto 7.0.31 h7f98852_1007
    - xz 5.2.6 h166bdaf_0
    - zlib 1.2.12 h166bdaf_3
    - zstd 1.5.2 h6239696_4
  run:
    - libblas >=3.9.0,<4.0a0
    - libgcc-ng >=12
    - liblapack >=3.9.0,<4.0a0
    - libstdcxx-ng >=12
    - r-base >=4.1,<4.2.0a0
    - r-data.table
    - r-fdrtool
    - r-rcpp
test:
  commands:
    - $R -e "library('FitHiC')"
about:
  description: Fit-Hi-C is a tool for assigning statistical confidence estimates to
    intra-chromosomal contact maps produced by genome-wide genome architecture assays
    such as Hi-C.
  home: https://bioconductor.org/packages/3.14/bioc/html/FitHiC.html
  license: GPL (>= 2)
  license_file: /opt/conda/conda-bld/bioconductor-fithic_1663226145477/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/lib/R/share/licenses/GPL-3
  summary: Confidence estimation for intra-chromosomal contact maps
extra:
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:fithic
    - doi:10.1101/gr.160374
