# This file created by conda-build 24.3.0
# meta.yaml template originally from:
# /opt/recipe, last modified Tue May  7 13:19:00 2024
# ------------------------------------------------

package:
  name: bioconductor-fgsea
  version: 1.28.0
source:
  md5: 53b8ab8a13390a0920bc13eeba3aa1b8
  url:
    - https://bioarchive.galaxyproject.org/fgsea_1.28.0.tar.gz
    - https://bioconductor.org/packages/3.18/bioc/src/contrib/Archive/fgsea/fgsea_1.28.0.tar.gz
    - https://bioconductor.org/packages/3.18/bioc/src/contrib/fgsea_1.28.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-fgsea/bioconductor-fgsea_1.28.0_src_all.tar.gz
build:
  number: '1'
  rpaths:
    - lib/
    - lib/R/lib/
  run_exports: bioconductor-fgsea >=1.28.0,<1.29.0a0
  string: r43hf17093f_1
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - binutils_impl_linux-64 2.40 ha885e6a_0
    - binutils_linux-64 2.40 hdade7a5_3
    - gcc_impl_linux-64 12.3.0 h58ffeeb_7
    - gcc_linux-64 12.3.0 h6477408_3
    - gxx_impl_linux-64 12.3.0 h2a574ab_7
    - gxx_linux-64 12.3.0 h4a1b8e8_3
    - kernel-headers_linux-64 2.6.32 he073ed8_17
    - ld_impl_linux-64 2.40 h55db66e_0
    - libgcc-devel_linux-64 12.3.0 h0223996_107
    - libgcc-ng 13.2.0 h77fa898_7
    - libgomp 13.2.0 h77fa898_7
    - libsanitizer 12.3.0 hb8811af_7
    - libstdcxx-devel_linux-64 12.3.0 h0223996_107
    - libstdcxx-ng 13.2.0 hc0a3c3a_7
    - make 4.3 hd18ef5c_1
    - sysroot_linux-64 2.12 he073ed8_17
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - _r-mutex 1.0.1 anacondar_1
    - binutils_impl_linux-64 2.40 ha885e6a_0
    - bioconductor-biocparallel 1.36.0 r43hf17093f_2
    - bwidget 1.9.14 ha770c72_1
    - bzip2 1.0.8 hd590300_5
    - c-ares 1.28.1 hd590300_0
    - ca-certificates 2024.2.2 hbcca054_0
    - cairo 1.18.0 h3faef2a_0
    - curl 8.7.1 hca28451_0
    - expat 2.6.2 h59595ed_0
    - font-ttf-dejavu-sans-mono 2.37 hab24e00_0
    - font-ttf-inconsolata 3.000 h77eed37_0
    - font-ttf-source-code-pro 2.038 h77eed37_0
    - font-ttf-ubuntu 0.83 h77eed37_2
    - fontconfig 2.14.2 h14ed4e7_0
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.12.1 h267a509_2
    - fribidi 1.0.10 h36c2ea0_0
    - gcc_impl_linux-64 13.2.0 h9eb54c0_7
    - gfortran_impl_linux-64 13.2.0 h738fc78_7
    - graphite2 1.3.13 h59595ed_1003
    - gxx_impl_linux-64 13.2.0 h2a599c4_7
    - harfbuzz 8.4.0 h3d44ed6_0
    - icu 73.2 h59595ed_0
    - kernel-headers_linux-64 2.6.32 he073ed8_17
    - keyutils 1.6.1 h166bdaf_0
    - krb5 1.21.2 h659d440_0
    - ld_impl_linux-64 2.40 h55db66e_0
    - lerc 4.0.0 h27087fc_0
    - libblas 3.9.0 5_h92ddd45_netlib
    - libcurl 8.7.1 hca28451_0
    - libdeflate 1.20 hd590300_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 hd590300_2
    - libexpat 2.6.2 h59595ed_0
    - libffi 3.4.2 h7f98852_5
    - libgcc-devel_linux-64 13.2.0 hceb6213_107
    - libgcc-ng 13.2.0 h77fa898_7
    - libgfortran-ng 13.2.0 h69a702a_7
    - libgfortran5 13.2.0 hca663fb_7
    - libglib 2.80.0 hf2295e7_6
    - libgomp 13.2.0 h77fa898_7
    - libiconv 1.17 hd590300_2
    - libjpeg-turbo 3.0.0 hd590300_1
    - liblapack 3.9.0 5_h92ddd45_netlib
    - libnghttp2 1.58.0 h47da74e_1
    - libpng 1.6.43 h2797004_0
    - libsanitizer 13.2.0 h6ddb7a1_7
    - libssh2 1.11.0 h0841786_0
    - libstdcxx-devel_linux-64 13.2.0 hceb6213_107
    - libstdcxx-ng 13.2.0 hc0a3c3a_7
    - libtiff 4.6.0 h1dd3fc0_3
    - libuuid 2.38.1 h0b41bf4_0
    - libwebp-base 1.4.0 hd590300_0
    - libxcb 1.15 h0b41bf4_0
    - libzlib 1.2.13 hd590300_5
    - make 4.3 hd18ef5c_1
    - ncurses 6.4.20240210 h59595ed_0
    - openssl 3.3.0 hd590300_0
    - pango 1.52.2 ha41ecd1_0
    - pcre2 10.43 hcad00b1_0
    - pixman 0.43.2 h59595ed_0
    - pthread-stubs 0.4 h36c2ea0_1001
    - r-base 4.3.3 hf0d99cb_1
    - r-bh 1.84.0_0 r43hc72bb7e_0
    - r-cli 3.6.2 r43ha503ecb_0
    - r-codetools 0.2_20 r43hc72bb7e_0
    - r-colorspace 2.1_0 r43h57805ef_1
    - r-cowplot 1.1.3 r43hc72bb7e_0
    - r-cpp11 0.4.7 r43hc72bb7e_0
    - r-crayon 1.5.2 r43hc72bb7e_2
    - r-data.table 1.15.2 r43h029312a_0
    - r-ellipsis 0.3.2 r43h57805ef_2
    - r-fansi 1.0.6 r43h57805ef_0
    - r-farver 2.1.1 r43ha503ecb_2
    - r-fastmatch 1.1_4 r43h57805ef_0
    - r-formatr 1.14 r43hc72bb7e_1
    - r-futile.logger 1.4.3 r43hc72bb7e_1005
    - r-futile.options 1.0.1 r43hc72bb7e_1004
    - r-ggplot2 3.5.1 r43hc72bb7e_0
    - r-glue 1.7.0 r43h57805ef_0
    - r-gtable 0.3.5 r43hc72bb7e_0
    - r-isoband 0.2.7 r43ha503ecb_2
    - r-labeling 0.4.3 r43hc72bb7e_0
    - r-lambda.r 1.2.4 r43hc72bb7e_3
    - r-lattice 0.22_6 r43h57805ef_0
    - r-lifecycle 1.0.4 r43hc72bb7e_0
    - r-magrittr 2.0.3 r43h57805ef_2
    - r-mass 7.3_60 r43h57805ef_1
    - r-matrix 1.6_5 r43h316c678_0
    - r-mgcv 1.9_1 r43h316c678_0
    - r-munsell 0.5.1 r43hc72bb7e_0
    - r-nlme 3.1_164 r43h61816a4_0
    - r-pillar 1.9.0 r43hc72bb7e_1
    - r-pkgconfig 2.0.3 r43hc72bb7e_3
    - r-r6 2.5.1 r43hc72bb7e_2
    - r-rcolorbrewer 1.1_3 r43h785f33e_2
    - r-rcpp 1.0.12 r43h7df8631_0
    - r-rlang 1.1.3 r43ha503ecb_0
    - r-scales 1.3.0 r43hc72bb7e_0
    - r-snow 0.4_4 r43hc72bb7e_2
    - r-tibble 3.2.1 r43h57805ef_2
    - r-utf8 1.2.4 r43h57805ef_0
    - r-vctrs 0.6.5 r43ha503ecb_0
    - r-viridislite 0.4.2 r43hc72bb7e_1
    - r-withr 3.0.0 r43hc72bb7e_0
    - readline 8.2 h8228510_1
    - sed 4.8 he412f7d_0
    - sysroot_linux-64 2.12 he073ed8_17
    - tk 8.6.13 noxft_h4845f30_101
    - tktable 2.10 h0c5db8f_5
    - xorg-kbproto 1.0.7 h7f98852_1002
    - xorg-libice 1.1.1 hd590300_0
    - xorg-libsm 1.2.4 h7391055_0
    - xorg-libx11 1.8.9 h8ee46fc_0
    - xorg-libxau 1.0.11 hd590300_0
    - xorg-libxdmcp 1.1.3 h7f98852_0
    - xorg-libxext 1.3.4 h0b41bf4_2
    - xorg-libxrender 0.9.11 hd590300_0
    - xorg-libxt 1.3.0 hd590300_1
    - xorg-renderproto 0.11.1 h7f98852_1002
    - xorg-xextproto 7.3.0 h0b41bf4_1003
    - xorg-xproto 7.0.31 h7f98852_1007
    - xz 5.2.6 h166bdaf_0
    - zlib 1.2.13 hd590300_5
    - zstd 1.5.6 ha6fb4c9_0
  run:
    - bioconductor-biocparallel >=1.36.0,<1.37.0
    - bioconductor-biocparallel >=1.36.0,<1.37.0a0
    - libblas >=3.9.0,<4.0a0
    - libgcc-ng >=12
    - liblapack >=3.9.0,<4.0a0
    - libstdcxx-ng >=12
    - r-base >=4.3,<4.4.0a0
    - r-bh
    - r-cowplot
    - r-data.table
    - r-fastmatch
    - r-ggplot2 >=2.2.0
    - r-matrix
    - r-rcpp
    - r-scales
test:
  commands:
    - $R -e "library('fgsea')"
about:
  description: The package implements an algorithm for fast gene set enrichment analysis.
    Using the fast algorithm allows to make more permutations and get more fine grained
    p-values, which allows to use accurate stantard approaches to multiple hypothesis
    correction.
  home: https://bioconductor.org/packages/3.18/bioc/html/fgsea.html
  license: MIT + file LICENCE
  summary: Fast Gene Set Enrichment Analysis
extra:
  additional-platforms:
    - linux-aarch64
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:fgsea
    - doi:10.1101/060012
