Package: epistasisGA
Type: Package
Title: An R package to identify multi-snp effects in nuclear family
        studies using the GADGETS method
Version: 1.0.0
Authors@R: c(person("Michael", "Nodzenski", 
    email = "michael.nodzenski@gmail.com",role = c("aut", "cre")), 
    person("Juno", "Krahn", role = "ctb"))
Description: This package runs the GADGETS method to identify epistatic effects 
    in nuclear family studies. It also provides functions for permutation-based 
    inference and graphical visualization of the results. 
License: GPL-3
Encoding: UTF-8
Imports: BiocParallel, data.table, matrixStats, stats, survival,
        igraph, batchtools, qgraph, grDevices, parallel, Rcpp (>=
        0.11.0), ggplot2, grid, graphics, utils
Suggests: Matrix, BiocStyle, knitr, rmarkdown, magrittr, kableExtra,
        testthat (>= 3.0.0)
LinkingTo: Rcpp, RcppArmadillo
RoxygenNote: 7.2.1
Depends: R (>= 4.0)
biocViews: Genetics, SNP, GeneticVariability
VignetteBuilder: knitr
URL: https://github.com/mnodzenski/epistasisGA
BugReports: https://github.com/mnodzenski/epistasisGA/issues
Config/testthat/edition: 3
git_url: https://git.bioconductor.org/packages/epistasisGA
git_branch: RELEASE_3_16
git_last_commit: e1353aa
git_last_commit_date: 2022-11-01
Date/Publication: 2022-11-01
NeedsCompilation: yes
Packaged: 2022-11-01 21:29:39 UTC; biocbuild
Author: Michael Nodzenski [aut, cre],
  Juno Krahn [ctb]
Maintainer: Michael Nodzenski <michael.nodzenski@gmail.com>
Built: R 4.2.3; x86_64-conda-linux-gnu; 2023-05-18 18:53:36 UTC; unix
