Package: DEGreport
Version: 1.8.2
Date: 2015-07-02
Type: Package
Title: Report of DEG analysis
Description: Creation of a HTML report of differential expression
        analyses of count data. It integrates some of the code
        mentioned in DESeq2 and edgeR vignettes, and report a ranked
        list of genes according to the fold changes mean and
        variability for each selected gene.
biocViews: DifferentialExpression, Visualization, RNASeq,
        ReportWriting, GeneExpression
Suggests: knitr, biomaRt, RUnit, BiocStyle, BiocParallel, coda,
        Nozzle.R1
Depends: R (>= 3.2.0)
Imports: plyr, utils, ggplot2, edgeR, BiocGenerics
Author: Lorena Pantano
Maintainer: Lorena Pantano <lorena.pantano@gmail.com>
License: GPL (>=2)
VignetteBuilder: knitr
Roxygen: list(wrap = TRUE)
NeedsCompilation: no
Packaged: 2016-05-16 04:35:42 UTC; biocbuild
Built: R 3.3.1; ; 2016-10-09 13:02:24 UTC; unix
