{% set version = "1.56.0" %}
{% set name = "DEDS" %}
{% set bioc = "3.8" %}

package:
  name: 'bioconductor-{{ name|lower }}'
  version: '{{ version }}'
source:
  url:
    - 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
    - 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
  md5: 520ca60c57d58412dd6eaede77dcd215
build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/
requirements:
  host:
    - r-base
  run:
    - r-base
  build:
    - {{ compiler('c') }}
    - make
test:
  commands:
    - '$R -e "library(''{{ name }}'')"'
about:
  home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
  license: LGPL
  summary: 'This library contains functions that calculate various statistics of differential expression for microarray data, including t statistics, fold change, F statistics, SAM, moderated t and F statistics and B statistics. It also implements a new methodology called DEDS (Differential Expression via Distance Summary), which selects differentially expressed genes by integrating and summarizing a set of statistics using a weighted distance approach.'
extra:
  identifiers:
    - biotools:deds
    - doi:10.1016/j.compbiomed.2013.12.002
  parent_recipe:
    name: bioconductor-deds
    path: recipes/bioconductor-deds
    version: 1.54.0

