clusterProfiler-package	clusterProfiler-package
bitr	bitr
bitr_kegg	bitr_kegg
browseKEGG	browseKEGG
buildGOmap	buildGOmap
clusterProfiler	clusterProfiler-package
compareCluster	compareCluster
compareClusterResult-class	compareClusterResult-class
DataSet	DataSet
dotplot,compareClusterResult,ANY-method	dotplot-methods
dotplot,compareClusterResult-method	dotplot-methods
download_KEGG	download_KEGG
dropGO	dropGO
enrichDAVID	enrichDAVID
enricher	enricher
enrichGO	enrichGO
enrichKEGG	enrichKEGG
enrichMKEGG	enrichMKEGG
fortify.compareClusterResult	fortify
gcSample	DataSet
getGOLevel	getGOLevel
Gff2GeneTable	Gff2GeneTable
go2ont	go2ont
go2term	go2term
gofilter	gofilter
groupGO	groupGO
groupGOResult-class	groupGOResult-class
GSEA	GSEA
gseGO	gseGO
gseKEGG	gseKEGG
gseMKEGG	gseMKEGG
idType	idType
KEGG_path2extid	KEGG_path2extid
kegg_species	DataSet
ko2name	ko2name
merge_result	merge_result
plot	plot-methods
plot,compareClusterResult,ANY-method	plot-methods
plot,compareClusterResult-method	compareClusterResult-class
plotGOgraph	plotGOgraph
plotting.clusterProfile	plotting.clusterProfile
read.gmt	read.gmt
search_kegg_organism	search_kegg_organism
show,compareClusterResult-method	compareClusterResult-class
show,groupGOResult-method	groupGOResult-class
simplify	simplify-methods
simplify,compareClusterResult-method	simplify-methods
simplify,enrichResult-method	simplify-methods
summary,compareClusterResult-method	compareClusterResult-class
viewKEGG	viewKEGG
