# This file created by conda-build 3.24.0
# meta.yaml template originally from:
# /opt/recipe, last modified Mon Dec 11 12:58:56 2023
# ------------------------------------------------

package:
  name: bioconductor-buscorrect
  version: 1.20.0
source:
  md5: 6d24bece1ac7982a2a157e5cccc01b99
  url:
    - https://bioarchive.galaxyproject.org/BUScorrect_1.20.0.tar.gz
    - https://bioconductor.org/packages/3.18/bioc/src/contrib/Archive/BUScorrect/BUScorrect_1.20.0.tar.gz
    - https://bioconductor.org/packages/3.18/bioc/src/contrib/BUScorrect_1.20.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-buscorrect/bioconductor-buscorrect_1.20.0_src_all.tar.gz
build:
  number: '0'
  rpaths:
    - lib/
    - lib/R/lib/
  run_exports: bioconductor-buscorrect >=1.20.0,<1.21.0a0
  string: r43ha9d7317_0
requirements:
  build:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - binutils_impl_linux-64 2.40 hf600244_0
    - binutils_linux-64 2.40 hbdbef99_2
    - gcc_impl_linux-64 12.3.0 he2b93b0_3
    - gcc_linux-64 12.3.0 h76fc315_2
    - kernel-headers_linux-64 2.6.32 he073ed8_16
    - ld_impl_linux-64 2.40 h41732ed_0
    - libgcc-devel_linux-64 12.3.0 h8bca6fd_103
    - libgcc-ng 13.2.0 h807b86a_3
    - libgomp 13.2.0 h807b86a_3
    - libsanitizer 12.3.0 h0f45ef3_3
    - libstdcxx-ng 13.2.0 h7e041cc_3
    - make 4.3 hd18ef5c_1
    - sysroot_linux-64 2.12 he073ed8_16
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - _r-mutex 1.0.1 anacondar_1
    - argcomplete 3.2.1 pyhd8ed1ab_0
    - binutils_impl_linux-64 2.40 hf600244_0
    - bioconductor-biobase 2.62.0 r43ha9d7317_1
    - bioconductor-biocgenerics 0.48.1 r43hdfd78af_2
    - bioconductor-data-packages 20231203 hdfd78af_0
    - bioconductor-delayedarray 0.28.0 r43ha9d7317_1
    - bioconductor-genomeinfodb 1.38.1 r43hdfd78af_1
    - bioconductor-genomeinfodbdata 1.2.11 r43hdfd78af_1
    - bioconductor-genomicranges 1.54.1 r43ha9d7317_1
    - bioconductor-iranges 2.36.0 r43ha9d7317_1
    - bioconductor-matrixgenerics 1.14.0 r43hdfd78af_1
    - bioconductor-s4arrays 1.2.0 r43ha9d7317_1
    - bioconductor-s4vectors 0.40.2 r43ha9d7317_1
    - bioconductor-sparsearray 1.2.2 r43ha9d7317_1
    - bioconductor-summarizedexperiment 1.32.0 r43hdfd78af_0
    - bioconductor-xvector 0.42.0 r43ha9d7317_1
    - bioconductor-zlibbioc 1.48.0 r43ha9d7317_1
    - bwidget 1.9.14 ha770c72_1
    - bzip2 1.0.8 hd590300_5
    - c-ares 1.23.0 hd590300_0
    - ca-certificates 2023.11.17 hbcca054_0
    - cairo 1.18.0 h3faef2a_0
    - curl 8.5.0 hca28451_0
    - expat 2.5.0 hcb278e6_1
    - font-ttf-dejavu-sans-mono 2.37 hab24e00_0
    - font-ttf-inconsolata 3.000 h77eed37_0
    - font-ttf-source-code-pro 2.038 h77eed37_0
    - font-ttf-ubuntu 0.83 h77eed37_1
    - fontconfig 2.14.2 h14ed4e7_0
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.12.1 h267a509_2
    - fribidi 1.0.10 h36c2ea0_0
    - gcc_impl_linux-64 13.2.0 h338b0a0_3
    - gettext 0.21.1 h27087fc_0
    - gfortran_impl_linux-64 13.2.0 h76e1118_3
    - graphite2 1.3.13 h58526e2_1001
    - gxx_impl_linux-64 13.2.0 h338b0a0_3
    - harfbuzz 8.3.0 h3d44ed6_0
    - icu 73.2 h59595ed_0
    - jq 1.7 hd590300_0
    - kernel-headers_linux-64 2.6.32 he073ed8_16
    - keyutils 1.6.1 h166bdaf_0
    - krb5 1.21.2 h659d440_0
    - ld_impl_linux-64 2.40 h41732ed_0
    - lerc 4.0.0 h27087fc_0
    - libblas 3.9.0 5_h92ddd45_netlib
    - libcurl 8.5.0 hca28451_0
    - libdeflate 1.19 hd590300_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 hd590300_2
    - libexpat 2.5.0 hcb278e6_1
    - libffi 3.4.2 h7f98852_5
    - libgcc-devel_linux-64 13.2.0 ha9c7c90_103
    - libgcc-ng 13.2.0 h807b86a_3
    - libgfortran-ng 13.2.0 h69a702a_3
    - libgfortran5 13.2.0 ha4646dd_3
    - libglib 2.78.3 h783c2da_0
    - libgomp 13.2.0 h807b86a_3
    - libiconv 1.17 hd590300_1
    - libjpeg-turbo 3.0.0 hd590300_1
    - liblapack 3.9.0 5_h92ddd45_netlib
    - libnghttp2 1.58.0 h47da74e_1
    - libnsl 2.0.1 hd590300_0
    - libpng 1.6.39 h753d276_0
    - libsanitizer 13.2.0 h7e041cc_3
    - libsqlite 3.44.2 h2797004_0
    - libssh2 1.11.0 h0841786_0
    - libstdcxx-devel_linux-64 13.2.0 ha9c7c90_103
    - libstdcxx-ng 13.2.0 h7e041cc_3
    - libtiff 4.6.0 ha9c0a0a_2
    - libuuid 2.38.1 h0b41bf4_0
    - libwebp-base 1.3.2 hd590300_0
    - libxcb 1.15 h0b41bf4_0
    - libzlib 1.2.13 hd590300_5
    - make 4.3 hd18ef5c_1
    - ncurses 6.4 h59595ed_2
    - oniguruma 6.9.9 hd590300_0
    - openssl 3.2.0 hd590300_1
    - pango 1.50.14 ha41ecd1_2
    - pcre2 10.42 hcad00b1_0
    - pip 23.3.1 pyhd8ed1ab_0
    - pixman 0.42.2 h59595ed_0
    - pthread-stubs 0.4 h36c2ea0_1001
    - python 3.12.0 hab00c5b_0_cpython
    - python_abi 3.12 4_cp312
    - pyyaml 6.0.1 py312h98912ed_1
    - r-abind 1.4_5 r43hc72bb7e_1005
    - r-base 4.3.2 hb8ee39d_1
    - r-bitops 1.0_7 r43h57805ef_2
    - r-catools 1.18.2 r43ha503ecb_2
    - r-crayon 1.5.2 r43hc72bb7e_2
    - r-gplots 3.1.3 r43hc72bb7e_2
    - r-gtools 3.9.5 r43h57805ef_0
    - r-kernsmooth 2.23_22 r43h13b3f57_0
    - r-lattice 0.22_5 r43h57805ef_0
    - r-matrix 1.6_4 r43h316c678_0
    - r-matrixstats 1.1.0 r43h57805ef_0
    - r-rcurl 1.98_1.13 r43hf9611b0_0
    - readline 8.2 h8228510_1
    - sed 4.8 he412f7d_0
    - setuptools 68.2.2 pyhd8ed1ab_0
    - sysroot_linux-64 2.12 he073ed8_16
    - tk 8.6.13 noxft_h4845f30_101
    - tktable 2.10 h0c5db8f_5
    - toml 0.10.2 pyhd8ed1ab_0
    - tomlkit 0.12.3 pyha770c72_0
    - tzdata 2023c h71feb2d_0
    - wheel 0.42.0 pyhd8ed1ab_0
    - xmltodict 0.13.0 pyhd8ed1ab_0
    - xorg-kbproto 1.0.7 h7f98852_1002
    - xorg-libice 1.1.1 hd590300_0
    - xorg-libsm 1.2.4 h7391055_0
    - xorg-libx11 1.8.7 h8ee46fc_0
    - xorg-libxau 1.0.11 hd590300_0
    - xorg-libxdmcp 1.1.3 h7f98852_0
    - xorg-libxext 1.3.4 h0b41bf4_2
    - xorg-libxrender 0.9.11 hd590300_0
    - xorg-libxt 1.3.0 hd590300_1
    - xorg-renderproto 0.11.1 h7f98852_1002
    - xorg-xextproto 7.3.0 h0b41bf4_1003
    - xorg-xproto 7.0.31 h7f98852_1007
    - xz 5.2.6 h166bdaf_0
    - yaml 0.2.5 h7f98852_2
    - yq 3.2.3 pyhd8ed1ab_0
    - zlib 1.2.13 hd590300_5
    - zstd 1.5.5 hfc55251_0
  run:
    - bioconductor-summarizedexperiment >=1.32.0,<1.33.0
    - bioconductor-summarizedexperiment >=1.32.0,<1.33.0a0
    - libblas >=3.9.0,<4.0a0
    - libgcc-ng >=12
    - liblapack >=3.9.0,<4.0a0
    - r-base >=4.3,<4.4.0a0
    - r-gplots
test:
  commands:
    - $R -e "library('BUScorrect')"
about:
  description: High-throughput experimental data are accumulating exponentially in
    public databases. However, mining valid scientific discoveries from these abundant
    resources is hampered by technical artifacts and inherent biological heterogeneity.
    The former are usually termed "batch effects," and the latter is often modelled
    by "subtypes." The R package BUScorrect fits a Bayesian hierarchical model, the
    Batch-effects-correction-with-Unknown-Subtypes model (BUS), to correct batch effects
    in the presence of unknown subtypes. BUS is capable of (a) correcting batch effects
    explicitly, (b) grouping samples that share similar characteristics into subtypes,
    (c) identifying features that distinguish subtypes, and (d) enjoying a linear-order
    computation complexity.
  home: https://bioconductor.org/packages/3.18/bioc/html/BUScorrect.html
  license: GPL (>= 2)
  license_file: /opt/conda/conda-bld/bioconductor-buscorrect_1702315028919/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold/lib/R/share/licenses/GPL-3
  summary: Batch Effects Correction with Unknown Subtypes
extra:
  copy_test_source_files: true
  final: true
