CRC                     CRC
GCcontent               GC content computation for BSgenome
addStepping             Adding disjoint levels to a GenomicRanges
                        object
biovizBase-package      biovizBase is a package which provides
                        utilities and color scheme...
colorBlindSafePal       Color blind safe palette generator
containLetters          Checking if string contains letters or not
crc1.GeRL               crc1.GeRL
crunch                  Fetching GRanges from various data source
darned_hg19_subset500   Subset of RNA editing sites in hg19...
estimateCoverage        Estimation of Coverage
flatGrl                 Transform GRangesList to GRanges
genesymbol              Gene symbols with position...
getBioColor             Color scheme getter for biological data
getFormalNames          Get formals from functions
getGaps                 get gaps for a stepping transformed GRanges
                        object
getIdeoGR               Get ideogram information
getIdeogram             Get ideogram.
getScale                Get scale information from a GRanges
getXScale               get x scale breaks and labels
getYLab                 parse x and y label information from a specific
                        object
hg19Ideogram            Hg19 ideogram without cytoband information...
hg19IdeogramCyto        Hg19 ideogram with cytoband information...
ideo                    ideogram without cytoband information
ideoCyto                ideogram with cytoband information
isIdeogram              Ideogram checking
isMatchedWithModel      Utils for Splicing Summary
isSimpleIdeogram        Simple ideogram checking
maxGap                  Estimated max gaps
mold                    mold data into data.frame
parseArgsForAes         Utils for parsing (un)evaluated arguments
pileupAsGRanges         Summarize reads for certain region
pileupGRangesAsVariantTable
                        Mismatch summary
plotColorLegend         Show colors
showColor               Show colors
shrinkageFun            Shrinkage function
splitByFacets           split a GRanges by formula
strip_formula_dots      strip dots around a formula variables
subsetArgsByFormals     Subset list of arguments by functions
transformGRangesForEvenSpace
                        Transform GRanges with New Coordinates
transformToGenome       Transform GRanges to different coordinates and
                        layout
