biosvd-package	biosvd
apply	Eigensystem-class
assayColorMap	EigensystemPlotParam-class
assayColorMap<-	assayColorMap-set
assaycorrelations	Eigensystem-class
assayMatrix	Eigensystem-class
biosvd	biosvd
colorIdFeatures	Eigensystem-class
compute	compute-methods
compute,data.frame-method	compute-methods
compute,Eigensystem-method	compute-methods
compute,ExpressionSet-method	compute-methods
compute,matrix-method	compute-methods
contrast	EigensystemPlotParam-class
contrast<-	contrast-set
eigenassays	Eigensystem-class
eigenexpressions	Eigensystem-class
eigenfeatures	Eigensystem-class
Eigensystem	Eigensystem-class
Eigensystem-class	Eigensystem-class
EigensystemPlotParam	EigensystemPlotParam-class
EigensystemPlotParam-class	EigensystemPlotParam-class
entropy	Eigensystem-class
exclude	exclude-methods
exclude,Eigensystem-method	exclude-methods
excludeEigenfeatures	Eigensystem-class
featureColorMap	EigensystemPlotParam-class
featureColorMap<-	featureColorMap-set
featurecorrelations	Eigensystem-class
featureMatrix	Eigensystem-class
figure	EigensystemPlotParam-class
figure<-	figure-set
filenames	EigensystemPlotParam-class
filenames<-	filenames-set
fractions	Eigensystem-class
HeLaData	HeLaData
matrix	Eigensystem-class
negativeValues	EigensystemPlotParam-class
negativeValues<-	negativeValues-set
palette	EigensystemPlotParam-class
palette<-	palette-set
path	EigensystemPlotParam-class
path<-	path-set
plot	plot-methods
plot,Eigensystem,EigensystemPlotParam-method	plot-methods
plots	EigensystemPlotParam-class
plots<-	plots-set
prefix	EigensystemPlotParam-class
prefix<-	prefix-set
project	project-methods
project,Eigensystem-method	project-methods
report	report-methods
report,Eigensystem,EigensystemPlotParam-method	report-methods
show,Eigensystem-method	Eigensystem-class
show,EigensystemPlotParam-method	EigensystemPlotParam-class
signMatrix	Eigensystem-class
StarvationData	StarvationData
whichAssays	EigensystemPlotParam-class
whichAssays<-	whichAssays-set
whichEigenassays	EigensystemPlotParam-class
whichEigenassays<-	whichEigenassays-set
whichEigenfeatures	EigensystemPlotParam-class
whichEigenfeatures<-	whichEigenfeatures-set
whichFeatures	EigensystemPlotParam-class
whichFeatures<-	whichFeatures-set
whichPolarAxes	EigensystemPlotParam-class
whichPolarAxes<-	whichPolarAxes-set
YeastData	YeastData
